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.2020 Sep 7;10(1):14716.
doi: 10.1038/s41598-020-71663-x.

Discovering the indigenous microbial communities associated with the natural fermentation of sap from the cider gum Eucalyptus gunnii

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Discovering the indigenous microbial communities associated with the natural fermentation of sap from the cider gum Eucalyptus gunnii

Cristian Varela et al. Sci Rep..

Abstract

Over the course of human history and in most societies, fermented beverages have had a unique economic and cultural importance. Before the arrival of the first Europeans in Australia, Aboriginal people reportedly produced several fermented drinks including mangaitch from flowering cones of Banksia and way-a-linah from Eucalyptus tree sap. In the case of more familiar fermented beverages, numerous microorganisms, including fungi, yeast and bacteria, present on the surface of fruits and grains are responsible for the conversion of the sugars in these materials into ethanol. Here we describe native microbial communities associated with the spontaneous fermentation of sap from the cider gum Eucalyptus gunnii, a Eucalyptus tree native to the remote Central Plateau of Tasmania. Amplicon-based phylotyping showed numerous microbial species in cider gum samples, with fungal species differing greatly to those associated with winemaking. Phylotyping also revealed several fungal sequences which do not match known fungal genomes suggesting novel yeast species. These findings highlight the vast microbial diversity associated with the Australian Eucalyptus gunnii and the native alcoholic beverage way-a-linah.

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Conflict of interest statement

The authors declare no competing interests.

Figures

Figure 1
Figure 1
The Tasmanian cider gumEucalyptus gunnii (A). Sap flows from naturally occurring holes in the trunk (B) and accumulates on the tree roots (C) and or on the soil (D). Bark, sap and soil samples were collected on the Tasmanian Central Plateau (E) from three different locations, Trawtha Makuminya (red), Skullbone Plains (yellow) and Five Rivers—Serpentine (blue) (F). Maps were created with ggmap version 3.0.0 in R version 3.6.2.
Figure 2
Figure 2
Bacterial communities associated withEucalyptus gunnii. (A) The cladogram shows different taxonomy levels in concentric rings. From the centre, kingdom, phylum, class, order, family and genus are shown. All identified bacterial phyla have been coloured, with taxa abundance proportional to circle size. (B) Most prevalent bacterial genera across samples are shown at different detection thresholds.
Figure 3
Figure 3
Comparison between yeast communities associated withEucalyptus gunnii (A) and withVitis vinifera (B). Cladograms show different taxonomy levels in concentric rings. From the centre, kingdom, phylum, class, order, family and genus. The main 8 classes have been coloured, whereas the genusSaccharomyces is indicated in black. Taxa abundance is proportional to circle size. The 15 most abundant yeast genera associated withE. gunnii (C) and withV. vinifera (D).V. vinifera data from Morrison-Whittle and Goddard,.
Figure 4
Figure 4
Boxplots showing relative abundance for the 15 most abundant fungal genera associated withEucalyptus gunnii based on geographical location (A), ecological niche (B) and sampling date (C). Stars indicate statistically significative differences according to the Kruskal–Wallis test (*p < 0.05; **p < 0.01; ***p < 0.001).
Figure 5
Figure 5
Principal Coordinates Analysis (PCoA) for the top 100 fungal OTUs in Five Rivers—Serpentine (blue), Skullbone Plains (yellow) and Trawtha Makuminya (red) for bark (A), sap (B) and soil (C) samples.
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