[HIV-1 genetic variants in the Asian part of Russia: a study (2005-2010)]
- PMID:24354062
[HIV-1 genetic variants in the Asian part of Russia: a study (2005-2010)]
Abstract
The HIV-1 genetic variants circulated in the Asian part of the Russian Federation in 2005-2010 were studied. The samples of HIV-1 (427 in total) were collected in Khabarovsk, Magadan, Kurgan, Krasnoyarsk, Noyabr'sk, Yakutsk, Altay, and Tyva. Sequencing of some genome regions followed by the phylogenetic analysis or specific Internet resource sampling were used as the main methods of the HIV subtyping. The domination of the IDU-A HIV-1 genetic variant typical of HIV-infection epidemic in Russia was shown in all regions tested in 2005-2010. This variant prevailed both in IDUs and heterosexuals. In addition to IDU-A, some other HIV-1 genetic variants were found among them: subtype B and recombinant CRF03_AB. The HIV-1 genetic polymorphism in Russia was found to be low. An increase in the genetic distance among studied de novo samples was noted in the Asian part of Russia in 2005-2010 (26-68%) as compared to the European variants in 1996-1999 (10%).
Similar articles
- Temporal trends in the HIV-1 epidemic in Russia: predominance of subtype A.Bobkov AF, Kazennova EV, Selimova LM, Khanina TA, Ryabov GS, Bobkova MR, Sukhanova AL, Kravchenko AV, Ladnaya NN, Weber JN, Pokrovsky VV.Bobkov AF, et al.J Med Virol. 2004 Oct;74(2):191-6. doi: 10.1002/jmv.20177.J Med Virol. 2004.PMID:15332265
- [Molecular epidemiological analysis of the HIV infection in the Blagoveshchensk and Khabarovsk Area (Russian Far East)].Kazennova EV, Neshumaev DA, Rukavitsin DV, Lapovok IA, Laga VIu, Rakcheeva OV, Vasil'ev AV, Tumanov AS, Vorontsova GA, Kuznetsova AV, Loĭfman EA, Starukhina IN, Kustova OI, Polovitsa NV, Lipskaia NA, Bobkova MR.Kazennova EV, et al.Vopr Virusol. 2014 Jul-Aug;59(4):31-6.Vopr Virusol. 2014.PMID:25549465Russian.
- [Molecular genetic characteristics of HIV-1 variants isolated in the subjects of the Russian Far East.].Kotova VO, Trotsenko OE, Balakhontseva LA, Bazykina EA.Kotova VO, et al.Vopr Virusol. 2019;64(2):79-89. doi: 10.18821/0507-4088-2019-64-2-79-89.Vopr Virusol. 2019.PMID:31412174Russian.
- Current status of HIV-1 diversity and drug resistance monitoring in the former USSR.Bobkova M.Bobkova M.AIDS Rev. 2013 Oct-Dec;15(4):204-12.AIDS Rev. 2013.PMID:24192601Review.
- Genetic and phylogenetic evolution of HIV-1 in a low subtype heterogeneity epidemic: the Italian example.Buonaguro L, Tagliamonte M, Tornesello ML, Buonaguro FM.Buonaguro L, et al.Retrovirology. 2007 May 21;4:34. doi: 10.1186/1742-4690-4-34.Retrovirology. 2007.PMID:17517125Free PMC article.Review.
Cited by
- HIV-1 genetic variants in the Russian Far East.Kazennova E, Laga V, Lapovok I, Glushchenko N, Neshumaev D, Vasilyev A, Bobkova M.Kazennova E, et al.AIDS Res Hum Retroviruses. 2014 Aug;30(8):742-52. doi: 10.1089/AID.2013.0194. Epub 2014 May 15.AIDS Res Hum Retroviruses. 2014.PMID:24773167Free PMC article.
Publication types
MeSH terms
Related information
LinkOut - more resources
Medical