Timing and mechanism of ancient vertebrate genome duplications -- the adventure of a hypothesis
- PMID:16099069
- DOI: 10.1016/j.tig.2005.08.004
Timing and mechanism of ancient vertebrate genome duplications -- the adventure of a hypothesis
Abstract
Complete genome doubling has long-term consequences for the genome structure and the subsequent evolution of an organism. It has been suggested that two genome duplications occurred at the origin of vertebrates (known as the 2R hypothesis). However, there has been considerable debate as to whether these were two successive duplications, or whether a single duplication occurred, followed by large-scale segmental duplications. In this article, we review and compare the evidence for the 2R duplications from vertebrate genomes with similar data from other more recent polyploids.
Similar articles
- Fourfold paralogy regions on human HOX-bearing chromosomes: role of ancient segmental duplications in the evolution of vertebrate genome.Asrar Z, Haq F, Abbasi AA.Asrar Z, et al.Mol Phylogenet Evol. 2013 Mar;66(3):737-47. doi: 10.1016/j.ympev.2012.10.024. Epub 2012 Nov 7.Mol Phylogenet Evol. 2013.PMID:23142696
- Phylogenetic dating and characterization of gene duplications in vertebrates: the cartilaginous fish reference.Robinson-Rechavi M, Boussau B, Laudet V.Robinson-Rechavi M, et al.Mol Biol Evol. 2004 Mar;21(3):580-6. doi: 10.1093/molbev/msh046. Epub 2003 Dec 23.Mol Biol Evol. 2004.PMID:14694077
- Phylogenetic analyses alone are insufficient to determine whether genome duplication(s) occurred during early vertebrate evolution.Horton AC, Mahadevan NR, Ruvinsky I, Gibson-Brown JJ.Horton AC, et al.J Exp Zool B Mol Dev Evol. 2003 Oct 15;299(1):41-53. doi: 10.1002/jez.b.40.J Exp Zool B Mol Dev Evol. 2003.PMID:14508816
- The flowering world: a tale of duplications.Van de Peer Y, Fawcett JA, Proost S, Sterck L, Vandepoele K.Van de Peer Y, et al.Trends Plant Sci. 2009 Dec;14(12):680-8. doi: 10.1016/j.tplants.2009.09.001. Epub 2009 Oct 7.Trends Plant Sci. 2009.PMID:19818673Review.
- Vertebrate genome evolution--the decade ahead.Ruddle FH.Ruddle FH.Genomics. 1997 Dec 1;46(2):171-3. doi: 10.1006/geno.1997.5096.Genomics. 1997.PMID:9417903Review.No abstract available.
Cited by
- Reproductive roles of the vasopressin/oxytocin neuropeptide family in teleost fishes.Mennigen JA, Ramachandran D, Shaw K, Chaube R, Joy KP, Trudeau VL.Mennigen JA, et al.Front Endocrinol (Lausanne). 2022 Oct 13;13:1005863. doi: 10.3389/fendo.2022.1005863. eCollection 2022.Front Endocrinol (Lausanne). 2022.PMID:36313759Free PMC article.Review.
- Phylogenetic and chromosomal analyses of multiple gene families syntenic with vertebrate Hox clusters.Sundström G, Larsson TA, Larhammar D.Sundström G, et al.BMC Evol Biol. 2008 Sep 19;8:254. doi: 10.1186/1471-2148-8-254.BMC Evol Biol. 2008.PMID:18803835Free PMC article.
- Testis-specific glyceraldehyde-3-phosphate dehydrogenase: origin and evolution.Kuravsky ML, Aleshin VV, Frishman D, Muronetz VI.Kuravsky ML, et al.BMC Evol Biol. 2011 Jun 10;11:160. doi: 10.1186/1471-2148-11-160.BMC Evol Biol. 2011.PMID:21663662Free PMC article.
- Evolution of vertebrate opioid receptors.Dreborg S, Sundström G, Larsson TA, Larhammar D.Dreborg S, et al.Proc Natl Acad Sci U S A. 2008 Oct 7;105(40):15487-92. doi: 10.1073/pnas.0805590105. Epub 2008 Oct 1.Proc Natl Acad Sci U S A. 2008.PMID:18832151Free PMC article.
- Genome-wide survey and expression analysis of the bHLH-PAS genes in the amphioxus Branchiostoma floridae reveal both conserved and diverged expression patterns between cephalochordates and vertebrates.Li KL, Lu TM, Yu JK.Li KL, et al.Evodevo. 2014 Jun 3;5:20. doi: 10.1186/2041-9139-5-20. eCollection 2014.Evodevo. 2014.PMID:24959341Free PMC article.
Publication types
MeSH terms
Related information
LinkOut - more resources
Full Text Sources