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Guide to Understanding PDB Data
Guided reference for methods of obtaining, exploration, and interpretation of PDB entries
Recorded lectures and related resources
A Deep Dive into Computed Structure Model Exploration at RCSB.org
Images used with permission from the Howard Hughes Medical Institute (www.hhmi.org). All rights reserved.
Aspartate Transcarbamoylase (ATCase)
Trypsin
Tomato Bushy Stunt Virus (TBSV)
Crambin
Transfer Ribonucleic Acid (tRNA)
B-DNA
Hemoglobin
Ribonuclease S
Deoxyhemoglobin
Lac Repressor
Hemoglobin (1000)
Cytochrome c (unbound)
TATA-Binding Protein (TBP)
Carboxypeptidase A
Immunoglobulin G (IgG)
DPG-Hemoglobin Complex
A-DNA
Collagen
Cytochrome c
Induced Lac Repressor
Hemoglobin S
Myohemerythrin
Intermolecular Contacts in Hemoglobin S
Deoxyribonucleic Acid (DNA)
Myoglobin Fold
Oxyhemoglobin
Myoglobin
Lysozyme (488)
Lysozyme (512)
Z-DNA
DNA
Illustrations are free for use under a CC-BY-4.0 license
HIV in Blood Plasma
Biosites: Muscle
Escherichia coli
Insulin Action
Lipid Droplets
SARS-CoV-2 mRNA Vaccine
JCVI-syn3A Minimal Cell
RecA and DNA
Autophagy
Biosites: Blood Plasma
Measles Virus Proteins
SARS-CoV-2 Fusion
Excitatory and Inhibitory Synapses
SARS-CoV-2 and Neutralizing Antibodies
Respiratory Droplet
Mycoplasma mycoides
Myoglobin in a Whale Muscle Cell
CytoSkeleton
Myelin
Poliovirus Neutralization
Abiogenesis
Escherichia coli Bacterium
Influenza Vaccine
Last Universal Common Ancestor
Biosites: Cytoplasm
Casein Micelle and Fat Globule in Milk
Influenza Virus
Phage-based COVID-19 Vaccine
Kinetochore
Zika Virus
HIV Vaccine
Coronavirus
Caulobacter Polar Microdomain
Blood
Biosites: Basement Membrane
Biosites: Red Blood Cell
Transfer RNA and Gag Protein
Coronavirus Life Cycle
Model of a Mycoplasma Cell
Cellulose Synthase
Red Blood Cell Cytoskeleton
Chloroplast
HIV-Infected Cell
Vascular Endothelial Growth Factor (VegF) Signaling
Ebola Virus
Bacteriophage T4 Infection
Insulin Release
Collagen and Extracellular Matrix
Biosites: Nucleus
Immunological Synapse
About PDB-101
Researchers around the globe make 3D structures freely available from the Protein Data Bank (PDB) archive. PDB-101 training materials help graduate students, postdoctoral scholars, and researchers use PDB data and RCSB PDB tools. Outreach content demonstrate how PDB data impact fundamental biology, biomedicine, bioengineering/biotechnology, and energy sciences in 3D by a multidisciplinary user community. Education Materials provide lessons and activities for teaching and learning.
PDB-101 is developed by theRCSB PDB.
RCSB PDB Core Operations are funded by theU.S. National Science Foundation (DBI-2321666), theUS Department of Energy (DE-SC0019749), and theNational Cancer Institute,National Institute of Allergy and Infectious Diseases, andNational Institute of General Medical Sciences of theNational Institutes of Health under grant R01GM157729.