US20150336111A1 - Method and Apparatus for Programmable Fluidic Processing - Google Patents

Abstract

A method and apparatus for microfluidic processing by programmably manipulating a packet. A material is introduced onto a reaction surface and compartmentalized to form a packet. A position of the packet is sensed with a position sensor. A programmable manipulation force is applied to the packet at the position. The programmable manipulation force is adjustable according to packet position by a controller. The packet is programmably moved according to the programmable manipulation force along arbitrarily chosen paths.

Description

• This application is a continuation of co-pending U.S. application Ser. No. 14/452,047, filed Aug. 5, 2014, which is a continuation of U.S. application Ser. No. 13/545,775 filed Jul. 10, 2012 (and now issued as U.S. Pat. No. 8,834,810), which is a continuation of co-pending U.S. application Ser. No. 12/622,775 filed Nov. 20, 2009 (and now issued as U.S. Pat. No. 8,216,513), which is a continuation of U.S. application Ser. No. 11/135,615 filed May 23, 2005 (and now issued as U.S. Pat. No. 7,641,779), which is a continuation of U.S. application Ser. No. 09/902,933 filed Jul. 10, 2001 (and now issued as U.S. Pat. No. 6,977,033), which is a continuation of U.S. application Ser. No. 09/249,955, filed Feb. 12, 1999 (and now issued as U.S. Pat. No. 6,294,063). The entire text of each of the above-referenced disclosures is specifically incorporated by reference herein without disclaimer.
BACKGROUND OF THE INVENTION
• 1. Field of the Invention
• The present invention relates generally to fluidic processing and, more particularly, to a method and apparatus for programmably manipulating and interacting one or more compartmentalized packets of material on a reaction surface.
• 2. Description of Related Art
• Chemical protocols often involve a number of processing steps including metering, mixing, transporting, division, and other manipulation of fluids. For example, fluids are often prepared in test tubes, metered out using pipettes, transported into different test tubes, and mixed with other fluids to promote one or more reactions. During such procedures, reagents, intermediates, and/or final reaction products may be monitored, measured, or sensed in analytical apparatus. Microfluidic processing generally involves such processing and monitoring using minute quantities of fluid. Microfluidic processing finds applications in vast fields of study and industry including, for instance, diagnostic medicine, environmental testing, agriculture, chemical and biological warfare detection, space medicine, molecular biology, chemistry, biochemistry, food science, clinical studies, and pharmaceutical pursuits.
• A current approach to fluidic and microfluidic processing utilizes a number of microfluidic channels that are configured with microvalves, pumps, connectors, mixers, and detectors. While devices using micro-scale implementations of these traditional approaches may exhibit at least a degree of utility, vast room for improvement remains. For instance, pumps and valves used in traditional fluidic transportation are mechanical. Mechanical devices, particularly when coupled to thin microchannels, may be prone to failure or blockage. In particular, thin channels may become narrowed or partially-blocked due to buildup of channel contamination, which, in turn, may lead to mechanical failure of associated devices. Current microfluidic devices also lack flexibility, for they rely upon a fixed pathway of microchannels. With fixed pathways, devices are limited in the number and type of tasks they may perform. Also, using fixed pathways makes many types of metering, transport, and manipulation difficult. With traditional devices, it is difficult to partition one type of sample from another within a channel.
• Electrical properties of materials have been employed to perform a limited number of fluidic processing tasks. For example, dielectrophoresis has been utilized to aid in the characterization and separation of particles, including biological cells. An example of such a device is described in U.S. Pat. No. 5,344,535 to Betts, incorporated herein by reference. Betts establishes dielectrophoretic collection rates and collection rate spectra for dielectrically polarizable particles in a suspension. Particle concentrations at a certain location downstream of an electrode structure are measured using a light source and a light detector, which measures the increased or decreased absorption or scattering of the light which, in turn, indicates an increase or decrease in the concentration of particles suspended in the fluid. Although useful for determining particle dielectrophoretic properties, such a system is limited in application. In particular, such a system does not allow for general fluidic processing involving various interactions, sometimes performed simultaneously, such as metering, mixing, fusing, transporting, division, and general manipulation of multiple reagents and reaction products.
• Another example of using certain electrical properties for specific types of processing is disclosed in U.S. Pat. No. 5,632,957 to Heller et al., incorporated herein by reference. There, controlled hybridization may be achieved using a matrix or array of electronically addressable microlocations in conjunction with a permeation layer, an attachment region and a reservoir. An activated microlocation attracts charged binding entities towards an electrode. When the binding entity contacts the attachment layer, which is situated upon the permeation layer, the functionalized specific binding entity becomes covalently attached to the attachment layer. Although useful for specific tasks such as DNA hybridization, room for improvement remains. In particular, such a system, utilizing attachment sites for certain binding entities is designed for particular applications and not for general fluidic processing of a variety of fluids. More specifically, such a system is designed for use with charged binding entities that interact with attachment sites.
• Another example of processing is disclosed in U.S. Pat. No. 5,126,022 to Soane et al., incorporated herein by reference. There, charged molecules may be moved through a medium that fills a trench in response to electric fields generated by electrodes. Although useful for tasks such as separation, room for improvement remains in that such devices are not well suited for performing a wide variety of fluidic processing interactions on a wide variety of different materials.
• There are other examples of using dielectrophoresis for performing specific, limited fluidic processing tasks. U.S. Pat. No. 5,795,457 to Pethig and Burt, incorporated herein by reference, disclose a method for promoting reactions between particles suspended in liquid by applying two or more electrical fields of different frequencies to electrode arrays. While perhaps useful for facilitating certain interactions between many particles of different types, the method is not well suited for general fluidic processing. U.S. Pat. No. 4,390,403 to Batchelder, incorporated herein by reference, discloses a method and apparatus for manipulation of chemical species by dielectrophoretic forces. Although useful for inducing certain chemical reactions, its flexibility is limited, and it does not allow for general, programmable fluidic processing.
• Any problems or shortcomings enumerated in the foregoing are not intended to be exhaustive but rather are among many that tend to impair the effectiveness of previously known processing techniques. Other noteworthy problems may also exist; however, those presented above should be sufficient to demonstrated that apparatus and methods appearing in the art have not been altogether satisfactory.
SUMMARY OF THE INVENTION
• In one respect, the invention is an apparatus for programmably manipulating a packet. As used herein, “packet” refers to compartmentalized matter and may refer to a fluid packet, an encapsulated packet, and/or a solid packet. A fluid packet refers to one or more packets of liquids or gases. A fluid packet may refer to a droplet or bubble of a liquid or gas. A fluid packet may refer to a droplet of water, a droplet of reagent, a droplet of solvent, a droplet of solution, a droplet of sample, a particle or cell suspension, a droplet of an intermediate product, a droplet of a final reaction product, or a droplet of any material. An example of a fluid packet is a droplet of aqueous solution suspended in oil. An encapsulated packet refers to a packet enclosed by a layer of material. An encapsulated packet may refer to vesicle or other microcapsule of liquid or gas that may contain a reagent, a sample, a particle, a cell, an intermediate product, a final reaction product, or any material. The surface of an encapsulated packet may be coated with a reagent, a sample, a particle or cell, an intermediate product, a final reaction product, or any material. An example of an encapsulated packet is a lipid vesicle containing an aqueous solution of reagent suspended in water. A solid packet refers to a solid material that may contain, or be covered with a reagent, a sample, a particle or cell, an intermediate product, a final reaction product, or any material. An example of a solid packet is a latex microsphere with reagent bound to its surface suspended in an aqueous solution. Methods for producing packets as defined herein are known in the art. Packets may be made to vary greatly in size and shape, but in embodiments described herein, packets may have a diameter between about 100 nm and about 1 cm.
• In this respect, the invention includes a reaction surface, an inlet port, means for generating a programmable manipulation force upon the packet, a position sensor, and a controller. The reaction surface is configured to provide an interaction site for the packet. The inlet port is coupled to the reaction surface and is configured to introduce the packet onto the reaction surface. The means for generating a programmable manipulation force upon the packet programmably moves the packet about the reaction surface along arbitrarily chosen paths. As used herein, by “arbitrarily chosen paths” it is meant that paths may be chosen to have any shape about the reaction surface. Arbitrarily chosen paths are not limited to movements that are predefined. Arbitrarily chosen paths may be modified in an unlimited manner about the reaction surface and may hence trace out any pattern. The position sensor is coupled to the reaction surface and is configured to sense a position of the packet on the reaction surface. The controller is coupled to the means for generating a programmable manipulation force and to the position sensor. The controller is configured to adjust the programmable manipulation force according to the position.
• In other aspects, the apparatus may also include an outlet port coupled to the reaction surface. The outlet port may be configured to collect the packet from the reaction surface. The means for generating a manipulation force may include a conductor adapted to generate an electric field. The means for generating a manipulation force may include a light source. The manipulation force may include a dielectrophoretic force, an electrophoretic force, an optical force, a mechanical force, or any combination thereof. The position sensor may include a conductor configured to measure an electrical impedance of the packet. The position sensor may include an optical system configured to monitor the position of the packet. The means for generating a programmable manipulation force and the position sensor may be integral.
• In another respect, the invention is an apparatus for microfluidic processing by programmably manipulating packets. The apparatus includes a reaction surface, an inlet port, an array of driving electrodes, and an array of impedance sensing electrodes. As used herein, an “array” refers to any grouping or arrangement. An array may be a linear arrangement of elements. It may also be a two dimensional grouping having columns and rows. Columns and rows need not be uniformly spaced or orthogonal. An array may also be any three dimensional arrangement. The reaction surface is configured to provide an interaction site for the packets. The inlet port is coupled to the reaction surface and is configured to introduce the packets onto the reaction surface. The array of driving electrodes is coupled to the reaction surface and is configured to generate a programmable manipulation force upon the packets to direct the microfluidic processing by moving the packets along arbitrarily chosen paths. The array of impedance sensing electrodes is coupled to the reaction surface and is configured to sense positions of the packets during the microfluidic processing.
• In other aspects, the apparatus may also include an outlet port coupled to the reaction surface. The outlet port may be configured to collect the packets from the reaction surface. The apparatus may also include a controller coupled to the array of driving electrodes and to the array of impedance sensing electrodes. The controller may be adapted to provide a feedback from the array of impedance sensing electrodes to the array of driving electrodes. The array of driving electrodes and the array of impedance sensing electrodes may be integral. The apparatus may also include an integrated circuit coupled to the array of driving electrodes and to the array of impedance sensing electrodes. The apparatus may also include a coating modifying a hydrophobicity of the reaction surface. The apparatus may also include a maintenance port.
• In another respect, the invention is an apparatus for processing packets in a partitioning medium. As used herein, a “partitioning medium” refers to matter that may be adapted to suspend and compartmentalize other matter to form packets on a reaction surface. A partitioning medium may act by utilizing differences in hydrophobicity between a fluid and a packet. For instance, hydrocarbon molecules may serve as a partitioning medium for packets of aqueous solution because molecules of an aqueous solution introduced into a suspending hydrocarbon fluid will strongly tend to stay associated with one another. This phenomenon is referred to as a hydrophobic effect, and it allows for compartmentalization and easy transport of packets upon or over a surface. A partitioning medium may also be a dielectric carrier liquid which is immiscible with sample solutions. Other suitable partitioning mediums include, but are not limited to, air, aqueous solutions, organic solvents, oils, and hydrocarbons. The apparatus includes a chamber, a programmable dielectrophoretic array, and an impedance sensing array. As used herein, a “programmable dielectrophoretic array” (PDA) refers to an electrode array whose individual elements can be addressed with different electrical signals. The addressing of electrode elements with electrical signals may initiate different field distributions and generate dielectrophoretic manipulation forces that trap, repel, transport, or perform other manipulations upon packets on and above the electrode plane. By programmably addressing electrode elements within the array with electrical signals, electric field distributions and manipulation forces acting upon packets may be programmable so that packets may be manipulated along arbitrarily chosen or predetermined paths. The chamber is configured to contain the packets and the partitioning medium. The programmable dielectrophoretic array is coupled to the chamber and is configured to generate a programmable dielectrophoretic force to direct processing of the packets. The impedance sensing array of electrodes is integral with the programmable dielectrophoretic array. The impedance sensing array of electrodes is configured to sense a position of the packets within the chamber.
• In other aspects, the apparatus may also include an integrated circuit coupled to the programmable dielectrophoretic array and to the impedance sensing array of electrodes. The apparatus may also include a controller coupled to the programmable dielectrophoretic array and to the impedance sensing array of electrodes. The controller may be adapted to provide a feedback from the impedance sensing array of electrodes to the programmable dielectrophoretic array. The electrodes may be between about 1 micron and about 200 microns and may be spaced between about 1 micron and about 200 microns.
• In another respect, the invention is a method for manipulating a packet in which the following are provided: a reaction surface, an inlet port coupled to the reaction surface, means for generating a programmable manipulation force upon the packet, a position sensor coupled to the reaction surface, and a controller coupled to the means for generating a programmable manipulation force and to the position sensor. A material is introduced onto the reaction surface with the inlet port. The material is compartmentalized to form the packet. A position of the packet is sensed with the position sensor. A programmable manipulation force is applied on the packet at the position with the means for generating a programmable manipulation force. The programmable manipulation force is adjustable according to the position by the controller. The packet is programmably moved according to the programmable manipulation force along arbitrarily chosen paths.
• In other aspects, the packet may include a fluid packet, an encapsulated packet, or a solid packet. The compartmentalizing may include suspending the material in a partitioning medium. The material may be immiscible in the partitioning medium. The reaction surface may include a coating, and the hydrophobicity of the coating may be greater than a hydrophobicity of the partitioning medium. The application of the programmable manipulation force may include applying a driving signal to one or more driving electrodes arranged in an array to generate the programmable manipulation force. The programmable manipulation force may include a dielectrophoretic force, an electrophoretic force, an optical force, a mechanical force, or any combination thereof. The sensing of a position may include applying a sensing signal to one or more impedance sensing electrodes arranged in an array to detect an impedance associated with the packet.
• In another respect, the invention is a method of fluidic processing in which the following are provided: a reaction surface, an inlet port coupled to the reaction surface, an array of driving electrodes coupled to the reaction surface, and an array of impedance sensing electrodes coupled to the reaction surface. One or more materials are introduced onto the reaction surface with the inlet port. The one or more materials are compartmentalized to form a plurality of packets. A sensing signal is applied to one or more of the impedance sensing electrodes to determine a position of one or more of the plurality of packets. A driving signal is applied to one or more of the driving electrodes to generate a programmable manipulation force on one or more of the plurality of packets at the position. One or more of the plurality of packets are interacted according to the programmable manipulation force.
• In other aspects, at least one of the plurality of packets may include a fluid packet, an encapsulated packet, or a solid packet. The sensing signal and the driving signal may be a single processing signal. The processing signal may include a first frequency component corresponding to the sensing signal and a second frequency component corresponding to the driving signal. A packet distribution map may be formed according to the positions of the plurality of packets. A position of one or more obstructions on the reaction surface may be determined. The interacting of one or more packets may include moving, fusing, merging, mixing, reacting, metering, dividing, splitting, sensing, collecting, or any combination thereof.
• In another respect, the invention is a method for manipulating one or more packets on a reaction surface in which the following are provided: a programmable dielectrophoretic array coupled to the reaction surface and an impedance sensing array of electrodes integral with the programmable dielectrophoretic array. A material is introduced onto the reaction surface. The material is compartmentalized to form the one or more packets. A path is specified upon the reaction surface. A programmable manipulation force is applied with the programmable dielectrophoretic array on the one or more packets to move the one or more packets along the path. A position of the one or more packets is sensed with the impedance sensing array of electrodes. Whether the position corresponds to the path is monitored. The one or more packets are interacted.
• In other aspects, at lease one of the one or more packets may include a fluid packet, an encapsulated packet, or a solid packet. The method may also include sensing a position of an obstruction; determining a modified path, the modified path avoiding the obstruction; and applying a programmable manipulation force on the one or more packets to move the one or more packets along the modified path. The specification of a path may include specifying an initial position and a final position. The introduction of the material may include extracting the material with a dielectrophoretic extraction force from an injector onto the reaction surface. The interacting of one or more packets may include moving, fusing, merging, mixing, reacting, metering, dividing, splitting, sensing, collecting, or any combination thereof.
• Other features and advantages of the present invention will become apparent with reference to the following description of typical embodiments in connection with the accompanying drawings wherein like reference numerals have been applied to like elements, in which:
BRIEF DESCRIPTION OF THE DRAWINGS
• FIG. 1 is a simplified schematic diagram that illustrates a microfluidic device according to one embodiment of the presently disclosed method and apparatus.
• FIG. 2 is a simplified illustration of dielectrophoretic force phenomenon.
• FIG. 3 illustrates a position sensing system according to one embodiment of the presently disclosed method and apparatus.
• FIG. 4 is a three dimensional view of a microfluidic device according to one embodiment of the presently disclosed method and apparatus.
• FIG. 5 is a side cross sectional view of a microfluidic device according to one embodiment of the presently disclosed method and apparatus.
• FIG. 6 is a simplified block representation of a microfluidic system according to one embodiment of the presently disclosed method and apparatus.
• FIG. 7 is a simplified block representation of a signal application arrangement according to one embodiment of the presently disclosed method and apparatus.
• FIG. 8 is a cross sectional view of microfluidic device according to one embodiment of the presently disclosed method and apparatus.
• FIG. 9 is a top view of a microfluidic device according to one embodiment of the presently disclosed method and apparatus.
• FIG. 9B is another top view of a microfluidic device according to one embodiment of the presently disclosed method and apparatus.
• FIG. 10 is a simplified block representation of a microfluidic system according to one embodiment of the presently disclosed method and apparatus.
• FIG. 11 is a top view of a microfluidic device showing a microfluidic process according to one embodiment of the presently disclosed method and apparatus.
• FIG. 12 illustrates certain packet interactions according to one embodiment of the presently disclosed method and apparatus.
• FIG. 13 is a flow chart showing a microfluidic process according to one embodiment of the presently disclosed method and apparatus.
DESCRIPTION OF ILLUSTRATIVE EMBODIMENTS
• The disclosed method and apparatus provide many advantages. For instance, they permit the fluidic processing of minute quantities of samples and reagents. The apparatus need not use conventional hardware components such as valves, mixers, pump. The apparatus may be readily miniaturized and its processes may be automated or programmed. The apparatus may be used for many different types of microfluidic processing and protocols, and it may be operated in parallel mode whereby multiple fluidic processing tasks and reactions are performed simultaneously within a single chamber. Because it need not rely on narrow tubes or channels, blockages may be minimized or eliminated. Further, if obstructions do exist, those obstructions may be located and avoided with position sensing techniques.
• Allowing for flexible microfluidic processing, the disclosed method and apparatus has vast applications including, but not limited to, blood and urine assays, pathogen detection, pollution monitoring, water monitoring, fertilizer analysis, the detection of chemical and biological warfare agents, food pathogen detection, quality control and blending, massively parallel molecular biological protocols, genetic engineering, oncogene detection, and pharmaceutical development and testing.
• In one embodiment of the disclosed method and apparatus, afluidic device10 as shown inFIG. 1 is employed. As illustrated,fluidic device10 may include areaction surface12, aport15,packets21,wall22,position sensor23, aforce generator25, and acontroller81.
• In operation, one or more materials may be introduced ontoreaction surface12 throughport15. The one or more materials may be compartmentalized to formpackets21 within a partitioning medium (not shown).Force generator25 generates a manipulation force onpackets21 to facilitate fluidic manipulations and interactions. In the illustrated embodiment,force generator25 generates two forces, F₁and F₂, that manipulatepackets21 and moves them according to the dashed lines ofFIG. 1.Position sensor23 senses the positions ofpackets21 and is able to monitor any packet interactions. Asposition sensor23 is coupled to forcegenerator25 bycontroller81, a feedback relationship may be established. Such feedback may include determination of the position ofpackets21 onreaction surface12 that allows for the application of manipulation forces onpackets21 based on position information. The position of packets during manipulation may thus be continuously monitored and this information may be used to continuously adjust one or more manipulation forces so to achieve movement ofpackets21 along a desired trajectory to a desired location onreaction surface12.
• In the illustrated embodiment ofFIG. 1, forces F₁or F₂may include many different types of forces. For instance, forces F₁and F₂may be dielectrophoretic, electrophoretic, optical (as may arise, for example, through the use of optical tweezers), mechanical (as may arise, for example, from elastic traveling waves or from acoustic waves), or any other suitable type of force (or combination thereof). In one embodiment, forces F₁and F₂may be programmable. Using programmable forces, packets may be manipulated along arbitrarily chosen paths.
• In the illustrated embodiment ofFIG. 1,position sensor23 may be operated with various mechanisms to sense positions ofpackets21. For instance, an optical imaging system may be used to determine and monitor packet positions. Specifically, an optical microscope may be connected to a CCD imaging camera, which may be interfaced with an imaging card in a computer. The information from the imaging card may be processed in the computer using image-analysis software. Alternatively, a CCD imaging device may be incorporated in or above thereaction surface12 to monitor the positions of packets. Thus, positions of packets and their movement onreaction surface12 may be continuously monitored and recorded in the computer. A different mechanism of packet position sensing uses electrical impedance measurements. The presence or absence of a packet between two electrode elements may affect the electrical impedance between the electrodes. Thus, measurement of electrical impedance between electrode elements may allow for indirect monitoring of packet positions.
• In order to better understand the operation and design of the currently disclosed method and apparatus, which will be discussed first in relation to dielectrophoretic forces, it is useful to discuss dielectrophoretic theory in some detail. Such a discussion is aided byFIG. 2, which illustrates two packets,21aand21b,both being subjected to dielectrophoretic forces.
• Dielectrophoretic forces may arise when a packet is placed in an inhomogeneous electrical field (AC or DC). InFIG. 2 the electrical field is weaker on the left side than on the right side. An electrical field induces electrical polarizations in the packet. The polarization charges are depicted at the two ends of thepackets21aand21balong the field lines35. Dielectrophoretic forces result from the interaction between the induced polarization (labeled as m₁and m₂inFIG. 2) and the applied inhomogeneous field. If a packet is suspended in a medium having different dielectric properties, such as a partitioning medium, then the packet may remain compartmentalized and may readily respond to manipulation forces against viscous drag. In a field of non-uniform strength, a packet may be directed towards either strong (packet21a) or weak (packet21b) electrical field regions, depending on whether the packet is more (packet21a) or less (packet21b) polarizable than a partitioning medium. In a field of non-uniform phase distribution (i.e. a traveling electrical field), a packet may be directed towards field regions of larger or smaller phase distribution, depending whether the packet has a longer or shorter dielectric response time than that of a partitioning medium.
DEP Theory
• When a packet of radius r, suspended in an immiscible medium of different dielectric properties, is subjected to an electrical field of frequency f, the polarization of the packet can be represented using an effective dipole moment (Wang et al., “A Unified Theory of Dielectrophoresis and Traveling Wave Dielectrophoresis”, Journal of Physics D: Applied Physics, Vol 27, pp. 1571-1574, 1994, incorporated herein by reference)
• 
  {right arrow over (m)}(f)=4πε_mr³P_CM(f){right arrow over (E)}(f)   (1)
• where {right arrow over (m)}(f) and {right arrow over (E)}(f) are the dipole moment and field vectors in the frequency domain, P_CM(f) is the so-called Clausius-Mossotti factor, given by
• 
  P_CM(f)=(ε*_d−ε*_m)/(ε*_d+2ε*_m).   (2)
• Here ε*_k=ε_k−jσ_k/(2πf) are the complex permittivities of the packet material (k=d) and its suspension medium (k=m), and ε and σ refer to the dielectric permittivity and electrical conductivity, respectively. Using the effective dipole moment method, the DEP forces acting on the packet are given by
• 
  {right arrow over (F)}(f)=2πr³ε_m(Re[P(f)]∇E_(rms)²+Im[P(f)](E_x0²∇φ_x0+E_y0²∇φ_y0+E_z0²∇φ_z0))   (3)
• where E(rms) is the RMS value of the field strength, E_i0and φ_i0(i=x; y;z) are the magnitude and phase, respectively, of the field components in a Cartesian coordinate frame. Equation (3) shows that the DEP force contains two independent terms. The first, relating to the real (in phase) part of the polarization factor Re[P(f)] and to non-uniformities in the field magnitude (∇E_(rms)²). Depending on the sign of Re[P(f)], this force directs the packet either toward strong or weak field regions. The second term relates to the imaginary (out of phase) part of the polarization factor (Im[P(f)]) and to field phase non-uniformities (Vφ_i0, i=x; y; z) that correspond to the field traveling through space from large to small phase regions. Depending on the sign of Im[P(f)], this directs packets toward regions where the phase values of the field components are larger or smaller.
• Equations (1-3) indicate that the DEP phenomena have the following characteristics:
• (1) DEP forces experienced by packets are dependent on the dielectric properties of the packets (ε*_d) and the partitioning medium (ε*_m).
• (2) The strong dependence of three-dimensional DEP forces on the field configuration allows for versatility in implementing dielectrophoretic manipulations.
DEP Forces on Packets
• In one embodiment, a conventional dielectrophoresis component may be used for packet manipulation. In this case, the DEP force is given by
• 
  {right arrow over (F)}(f)=2πr³ε_mRe[P(f)]∇E_(rms)²  (4)
• where r is the packet radius, ε_mis the dielectric permittivity of the suspending fluid. Re[P(f)] is the real (in phase) part of the polarization factor and ∇E_(rms)²is the is field non-uniformity factor. For packets of water (ε=78 and σ>10⁻⁴S/m) suspended in a hydrocarbon fluid (ε=˜2 and σ˜0), the factor Re[P(f)] is always positive and close to unity. Therefore, water packets are always attracted towards regions of large field strength. For example, if an electrode array composed of circular electrodes arranged in a hexagonal fashion is provided, water packets may be dielectrophoretically moved towards and trapped between, for example, an electrode pair, over a single electrode, or above a plurality of electrodes to which electrical signals are applied. Switching the electrical signals may result in movement of the DEP traps and may cause water packets to move in a chamber. Thus, packet manipulation may be realized by switching electrical signals applied to an electrode array so that DEP field traps are made “mobile” within a chamber.
Typical Forces and Velocities
• For a water packet of 100 μm suspended in a hydrocarbon fluid such as decane, the DEP force may be on the order of 1000 pN if the field non-uniformity is 1.25×10¹³V²/m³(equivalent to 5V RMS applied to an electrode pair ofdistance 50 μm with the field decaying to zero at 1000 μm). If the viscosity of the hydrocarbon fluid is small (0.838 mPa for Decane), the packet velocity may be of the order of 600 μm/sec, indicating that fast manipulation of packets is possible with electrode arrays. In the above analysis, DEP force equation (4) has been used, which was developed for non-deformable particles and holds well for suspended particles (such as cells, latex to particles). Fluid packets may be deformed under the influence of applied electrical field, ii affecting the accuracy of equation (4) in describing DEP forces for packets. Nevertheless, equation (4) should be generally applicable with some possible correction factors for different packet shapes.
• FIG. 3 shows one possible implementation ofposition sensor23 ofFIG. 2. is Shown inFIG. 3 are fiveimpedance sensing electrodes19, here illustrated as19a,19b,19c,19d,and19e.Eachsensing electrode19 may be coupled to an impedance sensor29, here illustrated asimpedance sensors29a,29b,29c,and29d.In one embodiment,impedance sensing electrodes19 may be positioned in operative relationship withsurface12 offluidic device10 inFIG. 1. For instance, sensingelectrodes19 may be placed on or nearsurface12. Aspackets21 are manipulated aboutsurface12 by the application of appropriate manipulation forces,impedance sensing electrodes19 and sensors29 may sense a position ofpackets21 by making one or more impedance measurements.
• If the dielectric medium above an electrode is displaced by a packet having different dielectric and/or conductive properties, the impedance detected at the electrode element will change. Thus, one may determine the position ofpackets21 by noting the impedance measurements associated therewith. As is shown inFIG. 3, the impedance betweenimpedance sensing electrodes19aand19bis “high” (seeimpedance sensor29d) relative to, for instance, the impedance betweenimpedance sensing electrodes19band19c(seeimpedance sensor29c). Thus, by pre-determining that the “high” impedance value corresponds to the impedance due to the partitioning medium, it may be deduced that some material of different impedance to the partitioning medium lies somewhere betweenimpedance sensing electrodes19dand19eand between19band19cbecause the impedance associated with those electrodes is “low” (seeimpedance sensor29a). By like reasoning, one may assume that no packet lies between impedance sensing electrodes19cand19d,for the impedance between those two electrodes is relatively “high” (seeimpedance sensor29band29c).
• Those of skill in the art will appreciate that the “low” and “high” values discussed above may be reversed, depending upon the relative impedances of a packet and of a suspending medium. In other words, in some situations, a relatively “high” impedance measurement may signal the presence of a packet in between a pair of electrodes while a relatively “low” impedance may signal the lack of a packet. Those of skill in the art will also appreciate that individual impedance measurements may exhibit a wide range of values (not just “low” or “high”), and it may be possible to characterize different types and sizes of materials by noting their associated impedance measurements. For instance, one may be able to differentiate, by type, the twopackets21 ofFIG. 3 by noting any differences in their impedance readings onimpedance sensors29aand29c.
• Impedance sensing may be based on the so-called mixture theory, which associates the impedance of a heterogeneous system with the dielectric properties of various system components and their volume fractions. Take a two-component, heterogeneous system wherecomponent2 having complex dielectric permittivity
• $({\mathrm{<figure-callout\; label="\varepsilon "\; filenames="US20150336111A1-20151126-D00006.png"\; state="\{\{state\}\}">\varepsilon </figure-callout>}}_2^{*}={\varepsilon }_2-\mathrm{<figure-callout\; label="j\; \; \sigma "\; filenames="US20150336111A1-20151126-D00006.png"\; state="\{\{state\}\}">j</figure-callout>}\frac{{\sigma }_{}}{}\frac{{}_2}{2\pi f},$
• f is the frequency) and a volume fraction α is suspended in component1 having complex dielectric permittivity
• $\left({\varepsilon }_1^{*}={\varepsilon }_1-j\frac{{\sigma }_1}{2\pi f}\right).$
• The complex permittivity of the total system is given by (Wang et al., “Theoretical and experimental investigations of the interdependence of the dielectric, dielectrophoretic and electrorotational behavior of colloidal particles” in J. Phys. D: Appl. Phys. 26: 312-322, 1993, incorporated herein by reference)
• ${\varepsilon }_{\mathrm{sys}}^{*}={\varepsilon }_1^{*}\frac{\frac{1}{\alpha }+2\frac{{\varepsilon }_2^{*}-{\varepsilon }_1^{*}}{{\mathrm{<figure-callout\; label="\varepsilon "\; filenames="US20150336111A1-20151126-D00006.png"\; state="\{\{state\}\}">\varepsilon </figure-callout>}}_2^{*}+{\varepsilon }_1^{*}}}{\frac{1}{\alpha }-\frac{{\mathrm{<figure-callout\; label="\varepsilon "\; filenames="US20150336111A1-20151126-D00006.png"\; state="\{\{state\}\}">\varepsilon </figure-callout>}}_2^{*}-{\varepsilon }_1^{*}}{{\mathrm{<figure-callout\; label="\varepsilon "\; filenames="US20150336111A1-20151126-D00006.png"\; state="\{\{state\}\}">\varepsilon </figure-callout>}}_2^{*}+{\varepsilon }_1^{*}}}.$
• The total impedance of the system, which is assumed to have length L and cross-sectional area A, is given by
• $\Omega =\frac{L}{\omega {\varepsilon }_{\mathrm{sys}}^{*}A}.$
• The electrical impedance between two electrode elements in the presence or absence of a packet may be analyzed using the above equations, with the parameters L and A determined experimentally. The existence of a packet may correspond to α>0 and the absence of a packet may correspond to α=0. From these equations, an impedance change would occur when a packet having different dielectric property (ε*₂) from the partitioning media (ε*₁) is introduced into the space between the two electrode elements.
• A relatively low impedance measurement may indicate an obstruction or a packet (as is illustrated inFIG. 3) on or nearsurface12. By determining impedance values, one may map locations of obstructions or packets relative tosurface12. In this way, one may generate a packet and/or obstruction distribution map with respect toreaction surface12 offluidic device10. With the benefit of this disclosure, one of skill in the art will appreciate that the description associated withFIG. 3 may be implemented in many different ways. In particular, one may use any suitable type of impedance measurement devices known in the art to function with one or more electrodes. Such devices may include an impedance analyzer, a DC/AC conductance meter, or any circuit based upon methods of operation of these or other instruments having similar function.
• FIG. 4 shows a three dimensional view of one embodiment of afluidic device10 according to the present disclosure.Fluidic device10 includesreaction surface12, aninlet port14, anoutlet port16, drivingelectrodes18,impedance sensing electrodes19,connectors20, andwall22.
• Reaction surface12 provides an interaction site for packets. In one embodiment,reaction surface12 may be completely or partially covered with a partitioning medium (not shown inFIG. 4) or other substance. In one embodiment,reaction surface12 may be coated. In particular, for manipulation of aqueous packets in a hydrophobic partitioning medium,reaction surface12 may include a hydrophobic coating, or layer, having a hydrophobicity similar to or greater than the hydrophobicity of the partitioning medium. Such a coating may prevent an aqueous packet from sticking, from spreading, or from becoming unstable upon contact withreaction surface12. Additionally, a coating may modify association and/or interaction forces between packets and reaction surfaces to facilitate manipulation of packets by appropriate manipulation forces. Further, a coating may be used to reduce contamination of reaction surfaces by reagents in packets. Still further, a coating may facilitate the deliberate adhesion, wetting, or sensing of packets at or on reaction surfaces. If a dielectric layer coating is applied, the layer should be made sufficiently thin to allow AC electric field penetration through the dielectric layer. In one embodiment, the thickness of the layer may be between about 2 nm and about 1 micron. In one embodiment, a hydrophobic coating may be Teflon that may be applied by means known in the art such as sputtering or spin-coating. It is to be understood that any other suitable coating that modifies an interaction between packets and the reaction surface may be used.
• Reaction surface12 may be formed from a number of suitable materials. In the illustrated embodiment,reaction surface12 is a planar surface that has an upper surface including drivingelectrodes18 andimpedance sensing electrodes19. Although illustrated as being coplanar withreaction surface12, it is to be understood that drivingelectrodes18 and19 may also be elevated or depressed with respect toreaction surface12. Likewise,reaction surface12 need not be planar. Rather, it may have concave or convex portions, or it may be deformed in some other manner.Reaction surface12 may be glass, silicon dioxide, a polymer, a ceramic, or any suitable electrically insulating material. The dimensions ofreaction surface12 may vary widely depending on the application but may be between about 20 microns by about 20 microns and about 50 centimeters by about 50 centimeters. More particularly,reaction surface12 may be between about 3 millimeters by about 3 millimeters and about 30 centimeters by about 30 centimeters.
• Inlet port14 may be adapted to inject or introduce materials ontoreaction surface12 and may be any structure allowing ingress toreaction surface12. In the illustrated embodiment,inlet port14 consists of an opening inwall22. Such an opening may be of any suitable size or shape. Alternatively,inlet port14 may be a syringe needle a micropipette, a tube, an inkjet injector, or any other suitable device able to inject a ii material for introduction ontoreaction surface12. Using a micropipette or equivalent device,wall22 may not need to include any openings. Rather, material may be introduced ontoreaction surface12 from above. A micropipette or any other equivalent device may be attached to a micromanipulation stage (not shown inFIG. 4) so that is material may be precisely deposited onto specific locations ofreaction surface12. In one embodiment,inlet port14 may consist of a cylindrical tube opening ontoreaction surface12. Such a tube may have a diameter of between about 1 micrometer and about 1 mm and, more particularly, between about 10 and 100 microns.
• Outlet port16 may be adapted to collect packets of material fromreaction surface12.Outlet port16 may be any structure allowing egress fromreaction surface12. In the illustrated embodiment,outlet port16 consists of an opening inwall22. The opening may be of any suitable size or shape. Alternatively,outlet port16 may be a micropipette or any other equivalent device able to collect a material fromreaction surface12.Wall22 may not need to include any openings. Rather, packets of material may be collected from reaction surface12 from above. A syringe or any other equivalent device may be attached to a micromanipulation stage (not shown inFIG. 4) so that packets may be precisely collected from specific locations onreaction surface12. In one embodiment,outlet port16 may consist of a cylindrical tube opening ontoreaction surface12. Such a tube may have a diameter of about 1 millimeter and a length of about 3 centimeters or longer.
• In one embodiment,inlet port14 andoutlet port16 may be integral. For instance, in the embodiment shown inFIG. 1port15 is a cylindrical tube opening ontoreaction surface12. In alternative embodiments, one micropipette may serve as both an inlet port and an outlet port. Alternatively, a single opening inwall22 may serve both input and output functions. In another embodiment, multiple inlet and outlet ports may be utilized.
• Fluidic device10 may include an arbitrary number of inlet and outlet ports. For example, any one of the three unnumbered openings inwall22, illustrated inFIG. 4, may serve as an inlet port, an outlet port, or an integral inlet-outlet port, such asport15 ofFIG. 1. In another embodiment, multiple inlet and/or outlet ports may extend completely or partially along awall22 so that materials may be introduced and/or collected to and/or fromreaction surface12. In such an embodiment, one may more precisely introduce or collect materials.
• InFIG. 4, drivingelectrode18 is one of a number of other driving electrodes arranged in an array uponreaction surface12. In this embodiment, drivingelectrodes18 may be associated withforce generator25 ofFIG. 1, for the drivingelectrodes18 may contribute to the generation of forces, such as forces F₁and F₂ofFIG. 1, to manipulate packets of material onreaction surface12 to promote, for instance, microfluidic interactions.
• Dielectrophoretic forces may be generated by an array ofindividual driving electrodes18 fabricated on an upper surface of areaction surface12. The drivingelectrode elements18 may be individually addressable with AC or DC electrical signals. Applying an appropriate signal to drivingelectrode18 sets up an electrical field that generates a dielectrophoretic force that acts upon a packet, known to be at a certain location through impedance measurements as described above in relation toFIG. 3. Switching different signals to different electrodes sets up electrical field distributions withinfluidic device10. Such electrical field distributions may be utilized to manipulate packets in a partitioning medium.
• In particular, the movement of packets under the influence of a manipulation force may be controlled by switching appropriate electrical signals to different combinations of drivingelectrodes18. Specifically, the switching of electrical signals may initiate different field distributions and generate manipulation forces that trap, repel, transport, or perform other manipulations upon packets of material. By programmably switching electrical signals to different combinations of drivingelectrodes18 within an array, electric field distributions and manipulation forces acting upon packets may be programmable so that packets may be manipulated along arbitrarily chosen or predetermined paths in a partitioning medium alongreaction surface12. Thus, packets may be manipulated in an unlimited manner. Signals may be appropriately switched to cause, for instance, a packet to move a single “unit distance”—a distance between two neighboring electrodes. Further, by programmably switching electrical signals, different microfluidic reactions may be performed in series or in parallel. An electrode array having such an ability to utilize programmable dielectrophoretic forces by programmed switching of electrical signals to different combinations of drivingelectrodes18 may be termed a programmable dielectrophoretic array (PDA).
• InFIG. 4,impedance sensing electrode19 is one of a number of other impedance sensing electrodes arranged in an array uponreaction surface12. In this embodiment,impedance sensing electrodes19 may be associated withposition sensor23 ofFIG. 1 and is illustrated inFIG. 3.Impedance sensing electrodes19 contribute to the sensing of packet positions uponreaction surface12 so that those packets of material may be monitored and manipulated according to position.
• In the illustrated embodiment, drivingelectrodes18 andimpedance sensing electrodes19 are electrodes of a two dimensional electrode array coupled to a top surface ofreaction surface12. The size of the array may vary according to need, but in one embodiment a 16 by 16 array is employed. Becausefluidic device10 is scaleable, smaller or larger arrays may be fabricated without significant departure from the present disclosure. For example, 256 by 256 arrays or larger may be made according to the present disclosure. Drivingelectrodes18 andimpedance sensing electrodes19 within an array may be uniformly or non-uniformly spaced. The spacing may vary widely, but in one embodiment, the spacing may be between about 2 microns and about 200 microns. The electrodes may have different forms such as lines, squares, circles, diamonds, polygons, or other suitable shapes. The dimensions of each electrode may vary, but a typical electrode may be between about 0.2 microns and about 10 mm., and more particularly, between about 1 micron and about 200 microns. Drivingelectrodes18 andimpedance sensing electrodes19 may be formed using any method known in the art. In one embodiment, such electrodes may be formed using standard photolithography techniques. For example, one may refer to, e.g., D. Qin et al, “Microfabrication, Microstructures and Microsystems”, Microsystem Technology in Chemistry and Life Sciences (Ed. Manz and Becker), Springer, Berlin, 1997, pp 1-20, which is incorporated herein by reference. Also, one may refer to Madou, Fundamentals of Microfabrication, CRC Press, Boca Raton, 1997, which is incorporated herein by reference. Depending upon the particular application, and the nature of the packets and partitioning medium, the size and spacing ofelectrodes18 and19 may be smaller than, of similar size, or larger than the diameters of the packets.
• In one embodiment,impedance sensing electrodes19 may be integral with drivingelectrodes18. In such an embodiment, the resulting array may be termed an integral array. With an integral array, a single conductor coupled toreaction surface12 may serve both purposes—driving packets and sensing positions of packets. Thus, a programmable manipulation force may be generated upon packets uponreaction surface12 and a position of those packets may be sensed with a single electrode array.
• In the embodiment ofFIG. 4,wall22 is adapted to enclose one or more sides ofreaction surface12. It is to be understood thatwall22 may be any suitable structure capable of enclosing one or more sides and/or the top ofreaction surface12. As illustrated,wall22 encloses four sides ofreaction surface12, defining an open reaction surface chamber. In a most typical embodiment, the chamber may have a thickness of between about 10 microns and about 20 millimeters. In another embodiment,wall22 may enclose the top ofreaction surface12, forming a closed reaction chamber.
• Wall22 may be formed from any suitable material. In one embodiment,wall22 may be made from machined plastic, aluminum, glass, plastic, ceramic, or any combination thereof. In one embodiment,wall22 may be partially or completely transparent to certain wavelengths of radiation. Thus, radiation may be transmitted throughwall22 to initiate or maintain certain microfluidic reactions or processes for sensing. For instance, a photochemical reaction may be initiated throughwall22.
• Connectors20 ofFIG. 4 may be adapted to provide electrical connections to drivingelectrodes18 and toimpedance sensing electrodes19.Connectors20 may provide electrical connections to an entire array of electrodes, or to preselected ones or groups. In one embodiment,connectors20 are coupled to a controller (not shown inFIG. 4) that may adjust a programmable manipulation force distribution generated by drivingelectrodes18 according one or more packets position sensed withimpedance sensing electrodes19. Thus, such a controller may effectively provide a feedback mechanism between the drivingelectrodes18 and theimpedance sensing electrodes19—The signals applied to drivingelectrodes18 may be adjusted in view of one or more results from theimpedance sensing electrodes19.
• Turning now toFIG. 5, there is shown a side cross section view of afluidic device10 according to the present disclosure.Fluidic device10 includes areaction chamber41 and an array of integral impedance sensing and driving electrodes,integral array43. In the illustrated embodiment, acontrol chip60 is coupled tointegral array43. Positioned upon a top surface ofcontrol chip60 may becapillary wall62 that forms a lower surface of a capillary64.Capillary64 may lead to aninlet port14 that leads intochamber41. Although illustrated with only one inlet port, it is contemplated that there may be several such ports providing access tochamber41. Above capillary64 is asubstrate66 that, in one embodiment, is made of glass although any suitable material known in the art may be utilized instead.
• In one embodiment,control chip60 may be an integrated circuit configured to controlintegrated array43. Alternatively,control chip60 may be a control interface leading to another controlling device such as an integrated circuit, computer, or similar device that may controlintegral array43.Control chip60 may utilize flip-chip technology or any other suitable technique to establish electrical control overintegral array43 by switching different signals to and from it.
• FIG. 6 shows acontroller81 according to one embodiment of the presently disclosed method and apparatus.Controller81 may include acomputer80, asignal generator82, anelectrode selector84, atransducer88, and afluidic device10 having a drivingelectrode18 and animpedance sensing electrode19.
• Computer80 may be configured to controlfluidic device10 and the fluid processing occurring uponreaction surface12.Computer80 may have a user interface that allows for simple programming ofsignal generator82 andtransducer88, which measures impedance, to allow for programmable microfluidic processing. In particular,computer80 may programmably control the initiation/termination of one or more signals fromsignal generator82, the parameters of the one or more signals including frequencies, voltages, and particular waveforms, and control the switching of one or more signals fromgenerator82 to different combinations ofelectrodes18 and19.
• Computer80 may vary signals in many ways. For instance, one signal having a first frequency component may be sent throughelectrode selector84 to a drivingelectrode18 while another signal having a second, different frequency component may be sent to, for instance, animpedance sensing electrode19 and throughelectrode selector84. Any sequence of signals or combinations of signals may be sent different combinations of electrodes and from thefluidic device10. Any signal parameter may be varied and any electrode selection may be controlled so that appropriate electric fields may be established at particular locations uponreaction surface12. Alternating Current or Direct Current signals may be utilized.
• Signal generator82 may send a driving signal to one ormore driving electrodes18 while sending a sensing signal to one or moreimpedance sensing electrodes19. In one embodiment, the driving signal and the sensing signal may comprise a single, composite processing signal having different frequency components. Such a signal may be used with an integrated array to provide (via a single processing signal) a frequency component to generate a programmable manipulation force and a frequency component to provide an impedance sensing signal. The manipulation and impedance sensing components may also be combined by multiplexing or switching in time as is known in the art.
• In one embodiment,signal generator82 provides one or more programmable driving signals to one ormore driving electrodes18 throughelectrode selector84 so that a programmable alternating-current electric field, such as a non-uniform field, may be produced atreaction surface12. That electric field may induce polarization of packets of materials adjacent to or in the vicinity of the one ormore driving electrodes18. A programmable dielectrophoretic force distribution may, in this manner, be generated that manipulates packets in a controllable, programmable manner so that varied programmable fluidic interactions may take place uponreaction surface12.
• In one embodiment,signal generator82 provides a sensing signal to one or moreimpedance sensing electrodes19 so that an impedance measurement may be made. The impedance sensing signal may be applied to one or more pairs ofimpedance sensing electrodes19 and a change in voltage or current may be detected and transmitted tocomputer80 viasensing electrodes88 andwire86.Computer80 may then compute the impedance and hence, determine whether a packet or obstruction was present at or near the pair(s) ofimpedance sensing electrodes19 being probed.
• In an embodiment utilizing a single integrated array (instead of separate impedance sensing and driving electrode arrays, an integrated array utilizes electrodes that function to both drive and sense packets), the integrated array may both generate a programmable manipulation force and sense an impedance. In one approach, electrical sensing signals for sensing electrode impedance may be applied at different frequencies from driving signals for manipulation of packets. Summing signal amplifiers (not shown) may be used to combine signals from sensing and driving electronics. By using a frequency filter network (not shown), electrode impedance sensing signals may be isolated from the driving signals. For example, a constant current at sensing frequency f_smay be applied to integrated electrode pairs to be measured. Thesensing electronics88, may then be operated at only the applied frequency f_sto determine a voltage drops across the integrated electrode pairs, thus allowing the impedance at the sensing frequency f_sto be derived without interference from the driving signals.
• In another embodiment, driving signals may be used to monitor electrical impedance directly. Driving signals may be switched to one or more integrated electrodes to generate a force to manipulate or interact packets upon a reaction surface. Simultaneously, an electrical current sensing circuit may be used to measure electrical current going through the energized integrated electrodes. Electrode impedances may be derived from such measurements of electrical current.
• Although any suitable device may be used, in one embodiment a function generator is used assignal generator82. More particularly, an arbitrary waveform signal generator in combination with voltage or power amplifies or a transformer may be used to generate the required voltages. In one embodiment,signal generator82 may provide sine-wave signals having a frequency up to the range of GHz and more particularly between about 1 kHz and about 10 MHz and a voltage between about 1 V peak-to-peak and about 1000 V peak-to-peak, and more particularly, between about 10 V peak-to-peak and about 100 V peak-to-peak.
• As illustrated,signal generator82 may be connected to anelectrode selector84.Electrode selector84 may apply one or more signals fromsignal generator82 to one or more individual electrodes (impedance sensing electrodes and/or driving electrodes may be individually addressable).Electrode selector84 may be one of a number of suitable devices including a switch, a multiplexer, or the like. Alternatively,electrode selector84 may apply one or more signals to one or more groups of electrodes. In one embodiment,selector84 is made of electronic switches or a multiplexer.Selector84 may be digitally controlled. With the benefit of this disclosure, those of skill in the art will understand thatselector84 may be any suitable device that may programmably divert one or more signals to one or more electrodes in any arbitrary manner.
• As illustrated inFIG. 6,controller81 provides a feedback loop mechanism fromimpedance sensing electrodes19 to drivingelectrodes18 viacomputer80, which itself is coupled to signalgenerator82,selector84, andtransducer88. With the benefit of the present disclosure, those of skill in the art will recognize thatcontroller81 may contain more or fewer components. The feedback mechanism allowscomputer80 to tailor its commands to signalgenerator82 according to positions of packets uponreaction surface12, as determined byimpedance sensing electrodes19. Thus,controller81 allows for the adjustment of driving signals (and hence the adjustment of programmable manipulation forces) according to positions of packets (as determined by impedance sensing electrodes19). In embodiments utilizing an integral array of electrodes having integralimpedance sensing electrodes19 and drivingelectrodes18, a feedback mechanism may operate as is follows. Positions of packets may be determined by measuring impedances between electrical elements by applying impedance sensing signals to the integral array. Position information may then be used to control driving signals to the integral array to perform microfluidic processing through the manipulation of packets. In oneembodiment computer80 may be replaced by an application specific integrated circuit controller (ASIC) designed specifically for the purpose.
• FIG. 7 shows anelectrode driver94 according to an embodiment of the presently disclosed method and apparatus.Driver94 includes acomputer80, asignal generator82, aresistor network100, aswitching network104, and abitmap108.Driver94 is coupled tofluidic device10 which includesreaction surface12 and anintegral array43.
• Driver94 may assist in the application of signals tointegral array43 in order to direct microfluidic interactions of packets of material uponreaction surface12. In one embodiment,computer80 directssignal generator82 to apply an AC signal tointegral array43. In the illustrated embodiment, fromsignal generator82 there may be provided, for example, eight increasing voltage amplitudes usingresistor network100, although more or fewer voltage amplitudes may be used. The eight AC signals may be distributed by switchingnetwork104 viaconnection106 to theintegral array43 according to abitmap108 or according to any other suitable data structure stored incomputer80 or in another device. By modifyingbitmap108 viacomputer80, different voltage amplitudes may be applied to different electrodes.
• In one embodiment, signals to each electrode ofintegral array43 may be represented inbitmap108 by 3 bits to address eight available voltage amplitudes. Voltage amplitude distributions ofbitmap108 may be transmitted sequentially to switchingnetwork104 viaconnection110 twelve bits at a time using a communication io protocol as is known in the art. In one embodiment, the communication protocol may use the following convention. To address a single electrode ofintegral array43, the first four bits may specify the row of the array. The second four bits may specify the column of the array. The next three bits may specify the desired voltage to be applied. The last bit may be used for error control by parity check. The rows/column arrangement may be used for different layouts of arrays. For instance, the row/column convention of addressing may be used even for a hexagonal grid array configuration. Those skilled in the art will appreciate that other methods may be used to address theelectronic switching network104 fromcomputer80.
• FIG. 8 is side cross-section view of one embodiment of afluidic device10.Fluidic device10 includes awall22 which encloses the sides and top of areaction surface12 to form areaction chamber41.Reaction surface12 includes anintegral array43. Coupled to the integral array may be aninterface board54.Interface board54 may interface theintegral array43 withintegrated circuits50 viainterconnect55 and solder bumps52.
• In the embodiment ofFIG. 8,interface board54 may be sandwiched betweenchamber41 andintegrated circuits50. On one side,interface board54 may provide electrical signals (AC or DC) to electrodes ofintegral array43, while the other side ofinterface board54 may include pads for flip-chip mounting ofintegrated circuits50. Intermediate layers ofinterface board54 may contain electrical leads, interconnects and vias, such asinterconnect55 to transfer power and signals to and from electrodes ofintegral array43 andintegrated circuits50.
• Interface board54 may be fabricated using suitable PC-board and flip chip technologies as is known in the art. Suitable silk-screened or electroplated flip-chip solder bump techniques may likewise be used. Alternatively, ink jet solder deposition may be used as is known in the art.
• FIG. 9 is a top view of an embodiment of afluidic device10. In the illustrated embodiment,fluidic device10 is made up of four distinct 8 by 8integral arrays43, forming a 16 by 16 array. Under each 8 by 8 array may be situated an integrated circuit (not shown inFIG. 9) that may provide control and signal processing to electrodes of theintegral array43. The integral arrays may be coupled to acircuit conducting pad34 that may be coupled to aninterface conducting pad36 by a bond wire38 (shown only in one quadrant). Connected to interface conductingpad36 may bewire42, or another suitable connector such as a PC board connector, leading to a computer or other suitable controlling device.
• FIG. 9B is another top view of an embodiment of afluidic device10. In this embodiment,many ports15 are situated along edges offluidic device10. Theseports15 may serve to inject and/or collectpackets21 to/fromreaction surface12. Also illustrated is asensor122 positioned adjacent aport15. Such a sensor is described in reference toFIG. 10 below.
• FIG. 10 is a block diagram of amicrofluidic processing system115.Processing system115 may be designed to allow for control of programmable dielectrophoretic array (PDA)116 that serves as the site for microfluidic interactions and may be constructed in accordance with the present disclosure. In view of its broad functionality,PDA116 may serve a role, in the field of fluidic processing, analogous to the role played by a Central Processing Unit in the field of computers.
• Coupled toPDA116 arefluidic sensors122.Fluidic sensors122 may measure and monitor fluid products from, in, or onPDA116. For instance,fluidic sensors122 may measure and identify reaction products and may quantify reactions between packets. In one embodiment,fluidic sensors122 may include an optical microscope or one or more sensors (chemical, electrochemical, electrical, optical, or the like), but any other suitable monitoring device known in the art may be substituted therewith. For example,fluidic sensors122 may be an electrochemical sensor that monitors the presence and concentration of electroactive (redox-active) molecules in a packet solution. An electrochemical sensor may take the form of two or more microelectrodes. In a three-electrode configuration, for example, electrodes may correspond to working, reference, and counter electrodes. A packet to be analyzed may be moved to be in contact with the three electrodes. A voltage signal may be applied between the working and reference electrode, and the current between the working and counter electrode may be monitored. The voltage-current relationship allows for the determination of the presence or absence, and concentration of electro-active molecules in the packet solution. Also attached toPDA116 may be suitable material injection andextraction devices120 coupled to is appropriate inlet or outlet ports of PDA116 (not shown inFIG. 10). Such devices may be any suitable structure allowing ingress to and egress fromPDA116.
• In electrical communication withPDA116 may bePDA voltage drivers126 anddielectric position sensors124.PDA voltage drivers126 may be adapted to drive electrodes withinPDA116 so that an electric field may be established that sets up manipulation forces that manipulate one or more packets of material withinPDA116 to promote microfluidic interactions. In one embodiment,PDA voltage drivers126 may include a signal generator and switching network as described in relation toFIG. 7.Dielectric position sensors124 may measure positions of packets withinPDA116. In one embodiment,dielectric position sensors124 may include measuring devices connected to appropriate sensors that may determine a position of one or more packets of material by sensing, for instance, a change in impedance between neighboring impedance sensing electrodes withinPDA116 and by correlating that change in impedance with a packet positioned adjacent the neighboring sensors according to the teachings of the present disclosure.
• Coupled to packet injection andextraction devices120,PDA voltage drivers126, anddielectric position sensors124 may becomputer interface128.Computer interface128 may be configured to allowhost computer130 to interact withPDA116. In one embodiment,computer interface128 may be a digital or analog card or board that may analyze impedance data to obtain a packet distribution map.
• In the embodiment ofFIG. 10,host computer130 may be coupled tocomputer interface128 to provide for control ofPDA116.Host computer130 may be coupled to position trackingagent132 and to low-level control agent134.Position tracking agent132 may be adapted to store, process, and track positions of packets within thefluidic processor PDA116. Low-level control agent134 may be configured to provide instructions tohost computer130 fromlibrary interface136 andsoftware interface138.Library interface136 may hold various sets of subroutines for programmably manipulating packets of materials onPDA116.Software interface138 that may allow for custom programming of instructions to be executed by thefluidic processor PDA116 to programmably manipulate packets. Alternatively established programs of manipulation instructions for specific fluid processing tests may be read from stored data and executed by thePDA fluid processor116.
• FIG. 11 illustrates operation of the presently disclosed method and apparatus. InFIG. 11, open squares represent electrodes of an integral array. However, it is contemplated that the description below applies equally well to a device utilizing separate impedance sensing electrodes and driving electrodes.
• In the illustrated embodiment, apacket21amay be introduced ontoreaction surface12 adjacent the location represented by integral impedance sensor/electrode201. The packet may be compartmentalized in an immiscible partitioning medium (not shown). The introduction of the packet may be accomplished using an appropriate inlet port positioned adjacent toelectrode201. Alternatively, a packet may be introducedadjacent electrode201 by applying an appropriate signal to electrode201 to generate an extraction force that may extract the packet from an inlet port or from an injector directly ontoreaction surface12 and adjacent toelectrode201.
• Once positioned uponreaction surface12,packet21amay be made to move along a predetermined path indicated by dashedline250. A path may be specified in a number of different ways. In one embodiment, a user may specifically define a path. For instance, one may specify a path, through appropriate programming of a controller or processing system, such as the one depictednumeral250. Alternatively, a user may specify a starting position and an ending position to define a path. For instance, a user may specify thatpacket21ais to be introducedadjacent electrode201 and end at a locationadjacent electrode215. Alternatively, one may specify a starting and ending location with specific path information in between. For instance, a user may specify a starting position, an ending position, and a wavy path in between. As can be seen fromFIG. 11, the path may have any arbitrary shape and it may be programmed in any number of ways.
• To movepacket21agenerally along the path, electrical signals may be suitably switched to integral impedance sensors/electrode pairs so that programmable manipulation forces may be created that act uponpacket21ato propel it generally along the specified path. As discussed earlier, the signals may be varied in numerous ways to achieve the proper manipulation force. In the illustrated embodiment, applying voltage signals to electrode pairs202 and203 may create an attractive dielectrophoretic force that movespacket21afromelectrode201 towardselectrode203 generally alongpath250. Aspacket21amoves generally along a specified path, the integral array may measure impedances to map the position of the packet uponreaction surface12. Knowing the position of a packet allows manipulation forces to be directed at appropriate positions to achieve a desired microfluidic processing task or interaction. In particular, knowing a position of a packet allows an appropriate signal to be switched to an appropriate electrode or electrode pair to generate a manipulation force that further propels or interacts the packet according to one or more instructions.
• Aspacket21amoves fromelectrode201 towardselectrode203, the impedance betweenelectrode202 andelectrode203 may change value, indicating thatpacket21ais between, or partially between, those two electrodes. The impedance may be measured as described inFIG. 3. A controller or processing system (not shown inFIG. 11) may register the location ofpacket21aand may apply a signal, for instance, to electrode pairs204 and205, creating an attractive dielectrophoretic force which propelspacket21atowards those electrodes generally alongpath250. As the impedance betweenelectrode204 andelectrode205 changes value, a controller or processing system may apply a signal toelectrodes206 and207 to propelpacket21aalongpath250. Aspacket21acontinues alongpath250, the impedance betweenelectrode206 andelectrode207 may change value, indicating the presence ofpacket21aadjacent that location along the array. Thus, aspacket21amoves alongpath250, a controller or processing system may constantly monitor the position of the packet by measuring impedance between electrode pairs and adjust electrical signals to an appropriate electrode or electrode pair (and hence, adjust manipulation forces) to continue to propel the packet further along the specified path.
• Measuring an impedance between pairs of electrodes not only allows a position of a packet to be determined, but it also allows for the determination of a location of an obstruction or blockage uponreaction surface12. For example, measuring the impedance betweenelectrodes211 and213 may indicate the presence ofobstruction212. By noting the position ofobstruction212, a controller or processing system may re-route one or more packets around the obstruction so that no interference with microfluidic processing interactions occurs. For example, if a path is specified that passes through an area occupied byobstruction212, a controller or processing system may modify electrical signals to propel a packet generally along the specified path while avoiding the obstruction. For instance, a stronger or weaker signal may be sent to one or more electrodes or electrode pairs nearobstruction212 to steer a packet clear of the blockage while still maintaining, generally, the path that was originally specified, and more particularly, the originally specified end point
• A controller or processing system according to the presently disclosed method and apparatus may be programmed to scan for several obstructions and/or packets. Such a scan may build up a distribution map, showing the location(s) of various packets and/or obstructions on anentire reaction surface12 or a portion thereof Such a distribution map may be a virtual map, stored, for example, in a computer memory or display. Turning again toFIG. 11, impedances of all electrode pairs adjacent topath250 may be measured to determine if an obstruction blocks that path or if a packet lies somewhere in that area. If the path is determined to be clear (e.g., if all the electrode pairs show an impedance value indicating a clear area), a packet may be safely propelled generally along the path while avoiding any interactions with other packets and/or obstructions. However, if an obstruction is discovered, several different actions may be taken. In one embodiment, the user may be notified that a blockage exists along the specified path. The user may then specify a different path or give another appropriate instruction. In another embodiment, the controller or processing system may determine if the obstruction may be avoided while still maintaining generally the same specified path. If possible, electrical signals may be modified and delivered to an electrode or electrode pairs to generate appropriate electrical field distributions that set up proper manipulation forces that will aid in avoiding the obstruction. Because, at least in part, of this ability to constantly measure positions and responses of packets during manipulation, a controller or processing system may be capable of monitoring the integrity of fluidic processing, reporting and correcting any errors that may occur.
• FIG. 11 also depicts how processing may be carried out on two packets. In the illustrated embodiment, asecond packet21bbegins onreaction surface12 nearelectrode217. A second path,path260, may be specified that ends atelectrode219. As can be seen,paths250 and260 may cross atinteraction point240. Atinteraction point240, the two packets may interact in many ways as illustrated, for example, inFIG. 12. The interaction may include, but is not limited to, fusing, merging, mixing, reacting, dividing, splitting, or any combination thereof For instance, the two packets may interact atinteraction point240 to form one or more intermediate or final reaction products. Those products may be manipulated in the same or in a similar manner as the two original packets were manipulated.
• FIG. 11 also depicts how maintenance may be performed uponreaction surface12. Amaintenance packet21cadapted to perform maintenance uponreaction surface12 may be introduced ontoreaction surface12 by a maintenance port (not shown inFIG. 11). A maintenance port may be similar to an inlet port in structure but may be dedicated to the introduction of one ormore maintenance packets21cdesigned specifically, for instance, to clean or maintainreaction surface12, a surface coating, or one or more electrodes or sensors.Maintenance packet21cmay also react with an obstruction in such a way as to remove that obstruction. As illustrated,maintenance packet21cmay begin nearelectrode241. It may then be propelled alongpath270, providing maintenance, perhaps, toelectrodes242 and243.Maintenance packet21cmay be propelled back to a maintenance port, extracted fromreaction surface12, and later used again, or it may discarded at an outlet part.
• FIG. 12 demonstrates several different possible fluidic interactions that may be carried out using the presently disclosed method and apparatus. In the illustrated embodiment, packets21 (only one is labeled for convenience) reside upon areaction surface12 having an integral array43 (only one electrode is labeled for convenience). In the top pane ofFIG. 12, there is shown an interaction in which a single packet is manipulated on the reaction surface by moving the packet in a programmed fashion. In the middle pane, two packets, starting at different locations upon the reaction surface, are directed, via appropriate electrical signals, to come together at a specified location (near the center of the array) to fuse together, for example, to initiate a reaction. The fused packet may be manipulated just as the original packets were manipulated. For instance, the fused packet may be moved to various locations or it may fuse again with another packet(s). Shown in the bottom pane ofFIG. 12 is a splitting interaction. As shown, a single packet is subjected to different programmable manipulation forces that cause the packet to split into two distinct packets. Such an interaction may be accomplished by, first, noting the position of the packet to be split, and then by applying appropriate signals to electrode pairs to generate two or more opposing forces that cause the packet to split apart.
• FIG. 13 is a flowchart showing one embodiment of a method of operation. A material may be introduced onto a reaction surface and compartmentalized to form one or more packets instep300. Multiple materials may be introduced at different locations alongreaction surface12 to form a plurality of packets. A path may be specified as instep310. The path may be designed to accomplish any type of microfluidic processing, manipulation, or interaction. Different reactions may be performed in serial or in parallel according to different paths. Instructions governing such processing may be embodied in the pseudo-code that may be routed throughcomputer interface128 ofFIG. 10. Illustrative code may read as follows:

• Example: AvidinActin.PSL

  Use inlet(1-3), outlet(1-2)
  Inlet(1) is actin
  Inlet(2) is avidin
  Inlet(3) is enzyme
  Outlet(1) is polymer
  Outlet(2) is waste
  Matrix(1,2) is accumulator
  Clean
  Do
  Sactin = (Pull actin)	// pull a new packet on the next
  Savidin = (Pull avidin)	// available matrix element next to
  Senzyme = (Pull enzyme)	// the inlets
  Move Sactin into accumulator	// merges components and enzyme
  Move Savidin into accumulator	// in a single packet
  Move Senzyme into accumulator
  Wait 1000ms
  ShiftRow accumulator.row ,+1	// drag packet left into polymer
  	outlet

  Move 0.5*accumulator into (2, accumulator.column)// drag half packet

  torow 2

  ShiftRow 2, + 1	// drag packet left into waste
  Loop Until polymer.count = 10	// number of packet at polymer
  	outlet = 10
  Clean

• Instep315,computer80 ofFIG. 6 or any other suitable device may determine the next unit step along the path specified instep315. In other words, a path may be broken down into unit steps and the next unit step or steps may be determined with respect to the specified path. Instep320, a programmable manipulation force is generated onreaction surface12 through the use of any of the mechanisms disclosed herein. The programmable manipulation force may manipulate the one or more packets according to instructions from a user. Instep330, the response(s) of the one or more packets may be monitored. This step may include measuring an impedance on the reaction surface as discussed herein. In particular, one may determine whether the one or more packets moved to where they were supposed to, or whether they interacted as instructed. In step340, it may be determined if the packet movement was successful—that is, it may be determined whether the packet ended up at a location corresponding to the unit step determined instep315.
• If a packet movement was successful (i.e., if the packet responded correctly to the programmable manipulation force(s)), then it may be determined, by comparison with the specified path, whether or not the packet destination has been reached. In other words, it may be determined if the packet has moved to the end location of the specified path. If the destination has not been reached, the next unit step movement may be determined atstep315 andsteps320,330,340, and365 may be repeated. If the destination has been reached, it may be determined whether another packet is to be manipulated instep370. This step may include a user prompt. If no further packets are to be manipulated, it may be determined whether fluidic processing is complete instep380. If yes, the process may be ended atstep390. Step390 may include the collecting of one or more packets, further analysis, throwing away of the reaction surface, or any procedure described herein. If the processing is not complete, the next step of processing may be determined instep395. The next step may entail, for example, the introduction of another packet, the specification of another path, or any other step ofFIG. 13.
• If a packet manipulation is unsuccessful (i.e., if the applied programmable manipulation force(s) did not produce a desired interaction or movement along a specified path as indicated by step340), one may locate an obstruction upon the reaction surface as indicated instep350 and as taught herein. After locating any obstructions, a new, modified path may be determined or specified as indicated bystep360, leading to step310.
• As mentioned with relation toFIG. 1, the present disclosure contemplates that many different types of forces may be utilized as a manipulation force for promoting fluidic interactions among packets of material on a reaction surface. Specifically, suitable forces other than dielectrophoresis include electrophoretic forces, optical forces, mechanical forces, or any combination thereof. Below are discussed embodiments of the present disclosure dealing with electrophoretic and optical manipulation forces.
Programmable Electrophoretic Array (PEA)
• A fluidic processing system incorporating a programmable electrophoretic array may be constructed according to the present disclosure. As used herein, “programmable electrophoretic array” (PEA) refers to an electrode array whose individual elements can is be addressed with DC, pulsed, or low frequency AC electrical signals (typically, less than about 10 kHz) electrical signals. The addressing of electrode elements with electrical signals initiates different field distributions and generates electrophoretic manipulation forces that trap, repel, transport or perform other manipulations upon charged packets on and above the electrode plane. By programmably addressing electrode elements within the array with electrical signals, electric field distributions and electrophoretic manipulation forces acting upon charged packets may be programmable so that packets may be manipulated along arbitrarily chosen or predetermined paths. A PEA may utilize electrophoretic forces in DC or low-frequency (typically, less than about 10 kHz) AC electrical fields. Such electrophoretic forces may be used instead of, or in addition to, another manipulation forces such as dielectrophoresis.
• Negative or positive charges may be induced or injected into fluid packets. The charged packets may be moved or manipulated by electrophoretic forces generated by an electrode array fabricated on an inner surfaces of a chamber in accordance with this disclosure. The electrode array, termed a programmable electrophoretic array (PEA), may consist of uniformly or non-uniformly spaced electrode elements. Individual electrode elements may be independently addressable with DC, pulsed, or low frequency AC electrical signals (<about 10 kHz). Characteristic dimensions of individual electrode elements may be of any size but, in one embodiment, may lie between 0.2 micron and 10 mm. Individual electrode elements may take similar or different geometrical forms such as squares, circles, diamonds, or other shapes. Programmably switchable electrical signals may be applied to individual electrode elements so that a programmable electrical field distribution may be generated. Such a distribution may impose electrophoretic forces to trap, repel, transport or manipulate charged packets in a partitioning medium. Further, electrical signals may be applied to such an array so that a packet may be broken down to two or more packets. The programmability of a PEA may be reflected in the fact that the electric field distributions and electrophoretic forces acting on charged packets may be programmable so that charged packets may be trapped or repelled or transported along arbitrarily chosen paths in the partitioning medium, and that a PEA may be programmed to perform different reactions in series or in parallel where different manipulation protocols of packets (differing in size, number, and/or reagent type concentration) may be required. As with PDA surface modification, if a dielectric layer coating is applied to the surface of a PEA to modify interaction forces between packets reaction surfaces, the dielectric layer may be made sufficiently thin (typically 2 nm to 1 micron) to allow for electric field penetration.
Optical Manipulation
• Optical tweezers (which may consist of a focused laser beam with a light intensity gradient) may be also be used for trapping and manipulating packets of material. Optical manipulation requires that the refractive indices of the packets be different from that of their suspending medium, for instance, a partitioning medium as described herein. As light passes through one or more packets, it may induce fluctuating dipoles. Those dipoles may interact with electromagnetic field gradients, resulting in optical forces directed towards or away from the brighter region of the light. If their refractive indices are higher than that of the partitioning medium, packets may be trapped in a bright region, and when the laser light moves with respect to the partitioning medium, packets may follow the light beam, allowing for optical manipulation forces. Conversely, if the packets have refractive indices smaller than their partitioning medium, they will experience forces directing them away from bright regions.
• Therefore, if packets have different refractive indexes from that of the partitioning medium (e.g., water packets in air or oil), optical tweezers may exert forces on them. Therefore, to manipulate and interact packets, a microscope or other optical system incorporating one or more laser tweezers may be used. A chamber containing a partitioning medium in accordance with the present disclosure may be placed into such an optical system. Following the introduction of packets of material into the chamber, laser tweezers may be used to trap packets. By moving the focal point of the optical tweezers with respect to the partitioning medium (e.g., moving a stage holding the thin chamber containing the partitioning medium whilst fixing the position of laser tweezers and/or by focusing the laser beam to different depths in the partitioning medium), packets may be manipulated as described herein. Through the use of apparatus such as a computer-controllable, multi-axis translation stage, the movement of the optical tweezers with respect to the suspending medium may be programmed or automatically controlled. Thus the optical tweezer may be moved, with respect to the medium, along any arbitrarily chosen or predetermined paths. By doing so, packets under the influences of the optical tweezers may be manipulated along any arbitrarily chosen or predetermined paths.
EXAMPLE 1
• Aqueous materials have been compartmentalized to form packets using hydrophobic liquids as a partitioning medium. Partitioning mediums so used have included decane, bromodocane, mineral oil, and 3 in 1™ oil. Packets have been formed by briefly sonicating about 3 milliliters of the hydrophobic liquid to which had been added 20 to 50 microliters of aqueous medium. Aqueous media tested have included deionized water, tap water (electrical conductivity of about 40 mS/m) and phosphate buffered saline (PBS) solution.
EXAMPLE 2
• Aqueous packets suspended in mineral oil, bromodoecane and 3 in 1™ oil have been collected by dielectrophoresis by applying sinusoidal signals to gold-on-glass electrode arrays having 20, 80 and 160 micron spacing, respectively. The 20-micron electrode array consisted of parallel line electrodes (20 microns in width and spacing). The 80 and 160 micron electrode arrays were of the interdigitated, castellated geometries. Aqueous packets were collected at electrode edges or tips when AC voltage signals between 100 Hz and 20 MHz were applied. Applied voltages were from 10 to 100 V peak-to-peak. The formation of pearl-chains of water packets has also been observed.
EXAMPLE 3
• Aqueous packets in hydrophobic suspension have been brought together and fused under the influence of dielectrophoretic forces on the same electrode arrays used in Example 2.
EXAMPLE 4
• Packets have been moved from one electrode element to another under influence of dielectrophoretic forces when the AC electrical field is switched on an addressable array of parallel line electrodes having 20 micron width and spacing.
EXAMPLE 5
• Sensitive AC impedance monitors have been built for use with microelectrode arrays. Such monitors may provide for sensitive dielectric sensing of packet positions.
• While the present disclosure may be adaptable to various modifications and alternative forms, specific embodiments have been shown by way of example and described herein. However, it should be understood that the present disclosure is not intended to be limited to the particular forms disclosed. Rather, it is to cover all modifications, equivalents, and alternatives falling within the spirit and scope of the disclosure as defined by the appended claims. Moreover, the different aspects of the disclosed apparatus and methods may be utilized in various combinations and/or independently. Thus the invention is not limited to only those combinations shown herein, but rather may include other combinations.

Claims (43)

1-41. (canceled)

42. A device to manipulate at least one packet, comprising:

a reaction surface;

an array of electrodes operably coupled to the reaction surface and adapted to generate electrical field distributions to impart manipulation forces to move at least one packet disposed proximate the reaction surface to different positions about the reaction surface; and

at least one position sensor configured to monitor a position of the at least one packet.

43. The device ofclaim 42, wherein the at least one position sensor comprises a plurality of position sensors.

44. The device ofclaim 43, wherein the plurality of position sensors are adapted to track the position of the at least one packet.

45. The device ofclaim 42, wherein the at least one position sensor is separate from the array of electrodes.

46. The device ofclaim 42, wherein the reaction surface is an integrated circuit.

47. The device ofclaim 42, wherein the array of electrodes is a two dimensional array of electrodes.

48. The device ofclaim 42, further comprising at least one of a dielectric coating or a hydrophobic coating covering the array of electrodes.

49. The device ofclaim 42, further comprising a partitioning medium in which the at least one packet can be suspended.

50. The device ofclaim 42, further comprising a fluidic sensor to measure an additional property of the at least one packet.

51. The device ofclaim 50, wherein the fluidic sensor comprises at least one of an optical microscope, a chemical sensor, an electrochemical sensor, an electrical sensor, or an optical sensor.

52. The device ofclaim 42, further comprising a capillary in communication with the reaction surface.

53. The device ofclaim 42, wherein the array of electrodes is adapted to adjust the manipulation forces based on the position of the at least one packet as monitored by the at least one position sensor.

54. The device ofclaim 42, wherein the at least one packet is a fluid packet.

55. A system to manipulate at least one packet, comprising:

a device comprising

a reaction surface,

an array of electrodes operably coupled to the reaction surface and adapted to generate electrical field distributions to impart manipulation forces to move at least one packet disposed proximate the reaction surface to different positions about the reaction surface, and

at least one position sensor configured to monitor a position of the at least one packet; and

a controller coupled to the array of electrodes and the at least one position sensor, the controller adapted to address the array of electrodes to generate the electrical field distributions and thereby impart the manipulation forces on the at least one packet to move the at least one packet to different positions about the reaction surface.

56. The system ofclaim 55, wherein the at least one position sensor comprises a plurality of position sensors.

57. The system ofclaim 56, wherein the plurality of position sensors are adapted to track the position of the at least one packet.

58. The system ofclaim 55, wherein the at least one position sensor is separate from the array of electrodes.

59. The system ofclaim 55, wherein the at least one packet is a fluid packet.

60. The system ofclaim 55, wherein the reaction surface is an integrated circuit

61. The system ofclaim 55, wherein the array of electrodes is a two dimensional array of electrodes.

62. The system ofclaim 55, wherein the device further comprises at least one of a dielectric coating or a hydrophobic coating covering the array of electrodes.

63. The system ofclaim 55, wherein the device further comprises a partitioning medium in which the at least one packet can be suspended.

64. The system ofclaim 55, wherein the device further comprises a fluidic sensor to measure an additional property of the at least one packet.

65. The system ofclaim 64, wherein the fluidic sensor comprises at least one of an optical microscope, a chemical sensor, an electrochemical sensor, an electrical sensor, or an optical sensor.

66. The system ofclaim 55, wherein the device further comprises a capillary in communication with the reaction surface.

67. The system ofclaim 55, wherein the controller is adapted to adjust the manipulation forces based on the position of the at least one packet as monitored by the at least one position sensor.

68. The system ofclaim 67, wherein the controller is adapted to adjust manipulation forces based on the position of the at least one packet to achieve movement of the at least one packet along a desired path.

69. The system ofclaim 67, wherein the controller is adapted to adjust manipulation forces based on the position of the at least one packet to merge the at least one packet with at least one additional packet.

70. The system ofclaim 67, wherein the controller is adapted to adjust manipulation forces based on the position of the at least one packet to perform at least one function selected from mixing or splitting the at least one packet.

71. A method to manipulate at least one packet, comprising:

providing a device comprising

a reaction surface, and

an array of electrodes operably coupled to the reaction surface and adapted to generate electrical field distributions to impart manipulation forces to move at least one packet disposed proximate the reaction surface to different positions about the reaction surface;

disposing at least one packet proximate the reaction surface;

generating electrical field distributions by addressing the array of electrodes to impart manipulation forces on the at least one packet to move the at least one packet to different positions about the reaction surface; and

monitoring a position of the at least one packet about the reaction surface.

72. The method ofclaim 71, wherein monitoring the position includes providing at least one position sensor and monitoring the position of the at least one packet by the at least one position sensor.

73. The method ofclaim 72, wherein the at least one position sensor comprises a plurality of position sensors.

74. The method ofclaim 73, wherein monitoring the position comprises tracking the position of the at least one packet by the plurality of position sensors.

75. The method ofclaim 72, wherein the at least one position sensor is separate from the array of electrodes.

76. The method ofclaim 71, wherein the reaction surface is an integrated circuit

77. The method ofclaim 71, wherein the array of electrodes is a two dimensional array of electrodes.

78. The method ofclaim 71, wherein the device further comprises a partitioning medium in which the at least one packet can be suspended.

79. The method ofclaim 71, wherein the device further comprises a fluidic sensor to measure an additional property of the at least one packet.

80. The method ofclaim 79, wherein the fluidic sensor comprises at least one of an optical microscope, a chemical sensor, an electrochemical sensor, an electrical sensor, or an optical sensor.

81. The method ofclaim 71, wherein the device further comprises a capillary in communication with the reaction surface.

82. The method ofclaim 71, further comprising adjusting the manipulation forces based on the position of the at least one packet as monitored by the at least one position sensor.

83. The method ofclaim 71, wherein the at least one packet is a fluid packet.

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