US20080187541A1 - Helicobacter pylori adhesin binding group antigen - Google Patents

Abstract

A novelHelicobacter pyloriblood group antigen binding (BAB) adhesin protein was isolated and purified, whereby said protein or fractions thereof bind specifically to fucosylated blood group antigens. The protein sequence of said adhesin is disclosed in this application. Simultaneously the DNA sequences for two genes, babA and babB, producing highly similar proteins, are disclosed. Said adhesin and/or DNA is useful for diagnose and therapy and/or prophylaxis directed againstH. pyloriinduced infections, e.g. gastritis and acid peptic disease, i.e. active vaccination.

A new immunoglobulin composition, which exhibits specific activity to a Lewis^bantigen bindingHelicobacter pyloriadhesin, or preferably, monoclonal and/or polyclonal antibodies to said adhesin offer a new and more efficient method of treatment and/or prevention of gastrointestinal diseases, caused byHelicobacter pylorior otherHelicobacterspecies, i.e. passive vaccination.

Description

CROSS REFERENCE TO RELATED APPLICATIONS
• This application is a divisional of U.S. patent application Ser. No. 10/761,201, filed Jan. 22, 2004, which is a divisional of U.S. patent application Ser. No. 09/202,178 (now issued as U.S. Pat. No. 6,709,656), which is the U.S. National Stage of International Application No. PCT/SE97/01009 filed Jun. 10, 1997, which claims priority to Swedish Application No. 9602287-6 filed Jun. 10, 1996 and Swedish Application No. 9701014-4 filed Mar. 19, 1997. All of the preceding applications are incorporated by reference herein in their entirety.
FIELD OF THE INVENTION
• The present invention relates to materials and methods for prevention, treatment and diagnosing of infections caused byHelicobacter pylori. More specifically the present invention relates to polypeptides and antibodies useful in vaccines for the treatment and prevention of pathologic infections caused byHelicobacter pyloristrains. The present invention specifically relates to a bacterial blood group antigen binding adhesin (BAB-adhesin). The present invention further relates to polynucleotides useful for the recombinant production of said polypeptides and for use in immunisation therapies. In addition, it relates to polypeptides, antibodies, and polynucleotides used for the detection of said bacteria.
• The present invention further relates to new immunoglobulins, which exhibit specific activity to a blood group binding adhesin, expressed byHelicobacter pylori, methods for the production of said immunoglobulins, their isolation and use. The present invention further relates to the treatment and prevention ofH. pyloriinduced infections in the gastrointestinal tract.
BACKGROUND OF THE INVENTION
• Helicobacter pyloriis a causative agent for acid peptic disease and the presence of this organism is highly correlated to the development of gastric adenocarcinoma. Bacterial adherence to the human gastric epithelial lining was recently shown to be mediated by fucosylated blood group antigens.
• Recent research has focused on the role ofHelicobacter pyloriin the development of ulcers in the gastric mucosa. Recent findings show a strong connection betweenH. pyloriand chronic, active gastritis and gastric ulcers. Furthermore, there appears to be a strong correlation between ventricular cancer and gastric ulcers. Traditional treatment of gastric ulcers has involved gastric resection, the administration of bismuth compositions, the administration of H₂-blockers and the administration of pH-buffering agents, to mention a few examples.
• More recently, various forms of treatment have been supplemented with the administration of antibiotics. One problem with presently known treatments is the risk for treatment failure. Furthermore, not only do microbes develop antibiotic resistance, the antibiotics administered often upset the natural balance of benign microbes, colonising the intestinal tract. This leads to diarrhea and other signs of intestinal discomfort, in addition to destabilising the benign flora in the intestines. Other treatments, e.g. H₂-blockers often require life-long medication to prevent the recurrence of disease.
• The foregoing, together with the fact thatH. pyloriis very widely spread among humans—according to a conservative estimate approximately 60% of all adult humans in the industrialised countries are infected—makes the diagnosing, prevention and treatment ofH. pyloriinfections an urgent task.
• Further, the fact that developing countries frequently lack the resources for conventional treatment of gastric ulcers further underlines the importance of finding new ways of treatment and prevention ofH. pyloriinduced infections. It is obvious, for many reasons, that disease prevention with vaccines is a preferable mode. A vaccine would provide an easily administered and economical prophylactic regimen againstH. pyloriinfections. An effective vaccine againstH. pyloriis nevertheless presently lacking.
STATE OF THE ART
• H. pyloricolonises the human gastric mucosa, in an equilibrium between adherence to the epithelial surface mucous cells and the mucous layer lining the gastric epithelium. Once infected, bacteria seems to colonise for a lifetime. Attachment to the epithelial lining protects the bacteria from the anti-microbial effects of the acidic gastric juice of the stomach lumen, as well as from physical forces such as peristalsis. For survival in this hostile ecological niche,H. pylorihas developed a battery of virulence factors; such as production of the enzyme urease that buffers the micro-environment around the bacteria and the polar flagellae to ensure high motility, a prerequisite in an ecological niche where the turnover of the mucous layer is in the range of hours. A subset ofH. pyloristrains produces the vacuolating cytotoxin, VacA, and the cytotoxin associated antigen CagA.
• Attachment is essential for colonisation of the epithelial lining and bacteria express surface associated adhesion molecules that recognise specific carbohydrate or protein receptors on the cell surfaces or mucous lining. The specificity in this interaction in combination with the genetically regulated receptor distribution results in a restricted range of cell lineages and tissues available for colonisation. Several putative receptor structures have been described forH. pylori, such as the hemagglutinin-sialic acid, sulphated glycoconjugates and sulphatides. Recently, the fucosylated blood group antigens H-1 and Lewis^bwere described (Borén et al., Science, 262, 18921993), mediating specific adherence ofH. pylorito human and rhesus monkey gastric surface mucous cells in situ. The H-1 and Lewis^bantigens are part of the blood group antigens that defineblood group 0 in the ABO system.
• Surface-exposed proteins are often constituents of the outer membrane. The outer membrane has a structural role and acts as a selective barrier, determining what enters the cell and what molecules are secreted. One class of outer membrane proteins are called porins, and create hydrophilic pores through the outer membrane where specific metabolites, such as sugar molecules, can cross. Recently the finding of a number of outer membrane proteins inH. pylori, was reported, which proteins were suggested to constitute a family of porin proteins.
• The BAB adhesin has previously been identified and shown to be localised on the bacterial surface ofH. pylori(SE 9602287-6). The blood group binding activity was shown to be pH dependent and the present inventors present evidence that the binding affinity to the Lewis^breceptor reveals a high equilibrium constant. For the purification of the BAB adhesin, a crosslinker-labelled receptor conjugate was used in order to mediate specific transfer of biotin to the adhesins on the bacterial surface. Thereafter the biotin-labelled adhesin could be extracted by streptavidin coated magnetic beads. Determination of the amino terminal amino acid sequence of the purified BAB adhesin exhibit homologies to outer membrane proteins ofH. pyloriporins.
• Intensive research has been directed to the immunological treatment and prevention ofH. pyloriinduced infections.EP 0 484 148 (Ando & Nakamura) describes a method for treating and/or preventing upper gastrointestinal disease in mammals, said method comprising orally administering to a patient in need thereof an effective amount of a pharmaceutical composition comprising anti-Helicobacter pyloripolyclonal immunoglobulins and a pharmaceutically acceptable carrier. Said description further dwells on the combination of said treatment in combination with the administration of antibiotics. As the method of producing said polyclonal antibodies,EP 0 484 148 describes the isolation and purification of anti-H. pyloriimmunoglobulins from the sera and milk of mammals.H. pyloriitself was not found in the stomachs of cows, goats, sheep, swine or horses, according toEP 0 484 148, but it was assumed that these animal species have colonizing microorganisms with antigenic determinants similar to those ofH. pyloribecause they have immunoglobulins which cross-react to strains ofH. pylorifound in humans. Preferably, according toEP 0 484 148, large mammals, e.g. pregnant cows, are immunized with whole cells ofH. pyloriand the immunoglobulins subsequently extracted from the milk or colostrum. In the immunization experiments, NCTC Strain 11362 and clinical isolateH. pyloriNo. 153 were used to trigger the production of immunoglobulins. On the other hand, NCTC Strain 11637 was used for analysing purposes. Immunization is claimed to yield an anti-H. pylorititer in the milk of such magnitude, that daily doses of 0.01-0.1 g/day immunoglobulin composition, are sufficient for successful therapy. The claimed interval of 0.01-0.1 g/day is however not supported by the experiments presented by Ando & Nakamura and so low doses have hitherto not proven efficient in clinical tests. The doses actually used in example 5 and 7 are in the order of magnitude of 1 g/day, i.e. 10-fold the upper limit of the given interval. Furthermore, it is very unlikely, that unspecific immunoglobulin mixtures as those manufactured by Ando & Nakamura, would be effective in claimed doses as similar doses are ineffective against other gastrointestinal pathogens. The simultaneous administration of antibiotics, extensively discussed in the description, underlines the insufficiency of the disclosed immunoglobulins.
• EP 0 469 359 (Cordle & Schaller) likewise describes the immunization of mammals, preferably pregnant cows, with formalin killedH. pyloribacteria (ATCC Strain 26695). Anti-H. pyloripolyclonal antibodies were isolated and purified from the milk and finally fed to piglets, in amounts of about 0.5 g immunoglobulins, three times daily. The results were assessed by determination of the number of biopsy specimens, which were positive for Gram-negative bacteria after the trial. Gram-negative bacteria was found in 78% of the piglets fed a non-immune nutrient but only (Sic!) in 35% of the piglets fed a nutrient containing so called specific anti-H. pyloriantibodies.
• Anti-H. pyloripolyclonal antibodies, effective to cause aggregation ofH. pylori, have thus been administered orally as a regimen in the treatment and prevention ofH. pyloriinduced infections in the gastrointestinal tract. Nevertheless, as also noted inEP 0 484 148 A1, it is still not clear, how many antigenic determinants are present on the surface ofH. pylori. The occurrence of a wide variety ofH. pyloristrains, makes questionable the practical efficiency of any polyclonal immunological therapy according to the state of the art. Immunization using whole bacteria will always trigger a highly polyclonal immunresponse with a low level of antibodies against a given antigenic determinant. This is underlined e.g. by the results presented by Cordle & Schaller, where, although the number ofHelicobacterpositive biopsies were reduced, complete cure was not obtained through the treatment according to their invention.
• It is notable, that the dose of immunoglobulin needed for oral prophylaxis or therapy has not yet been clearly defined. In a normal human adult, approximately 5 g IgA is produced and secreted at mucosal surfaces each day. Obviously, doses of this magnitude are economically and practically unfeasible for large-scale therapy or prophylaxis. In studies on the effect of oral immunoglobulin on rotavirus infection, daily doses in the interval of 600 to 9000 mg have been tried in clinical tests. Successful intervention has also been reported when treatingH. pyloriand cryptosporidial infections with daily administrations of 3 to 15 g immunoglobulin from immunized cows (Hammarström et al., Immunol Rev, 139 (1994) 43-70). Generally speaking, all studies hitherto point to the necessity of using high doses of immunoglobulins when trying to combat an ongoing infection. The need for more specific immunoglobuline preparations, allowing the use of smaller doses, is thus an urgent one.
• To maximize the potency of an immunological regimen for the treatment and prevention ofH. pylori, it is of great importance to find a specific conserved antigenic determinant, which plays a central role for the pathogenicity ofH. pylori. Using such an antigenic determinant would make it possible to produce highly specific and therapeutically efficient novel polyclonal and/or monoclonal immunoglobulin preparations.
SUMMARY OF THE INVENTION
• The above problem of providing specific, cost-efficient and therapeutically superior immunoglobulin preparations for the treatment and prevention ofH. pylorihas now been solved through the composition and methods according to the attached patent claims. The present inventors have now surprisingly shown, that highly specific and therapeutically efficient polyclonal and/or monoclonal immunoglobulin preparations can be provided through the immunization of an animal with an adhesin protein, specific forH. pylori. Said adhesin protein is characterized already in the priority applications SE 9602287-6 and SE 9701014-4, which hereby are referred to in their entirety. The invention will now be described in closer detail with reference to the attached, non-limiting figures and examples.
• One objective of the present invention was to further purify and characterize theH. pyloriblood group antigen binding (BAB) adhesin to make possible the development of methods and materials for specific and selective diagnosing and treatment ofH. pyloriinduced infections and related diseases and the development of said methods and materials. A further and equally important objective was to determine the DNA sequences of the genes involved in the expression of this protein. These objectives were fulfilled through the protein specified inclaim1, the DNA disclosed in claim13 and14 and the methods and materials specified in the subsequent claims. The DNA sequences are attached asAppendix 1 and 2, disclosing the babA and babB sequences, respectively. The full protein sequence is disclosed inAppendix 3.
DESCRIPTION OF THE FIGURES
• FIG. 1 A) illustrates the bacterial binding to soluble blood group antigens.H. pyloristrains were incubated with¹²⁵I-labeled blood group antigen glycoconjugates and bound¹²⁵I-activity was measured (Note the absence of blood group antigen binding shown for strains MO19 and 26695.),
• FIG. 1 B) illustrates an receptor displacement assay.Strain CCUG 17875 was first incubated with 10 ng¹²⁵I-labeled Le^bantigen glycoconjugate and the complex was then challenged (1 h) with an excess of unlabeled Le^bor Le^aglycoconjugate, before the¹²⁵I-activity in the bacterial pellet was measured. Concentrations of the unlabeled glycoconjugate ranged from 50 ng to 8 μg and C) shows the results of a Scatchard analysis of theH. pylori-Le^bantigen interaction. Bacterial binding to the Le^bglycoconjugate was titrated to an affinity constant (Ka) value of 8×10⁻¹⁰M⁻¹(13).
• FIG. 2: Upper panel: Prevalence of the BabA adhesin in the bacterial population. Cells ofstrain CCUG 17875 were incubated with biotinylated Le^b(A) or Le^b(B) glycoconjugate. Bound biotinylated Lewis-conjugate was detected with FITC-labeled streptavidin (green fluorescence) and bacteria were counterstained with propidium iodine (red fluorescence). Lower panel: Localisation of the BabA adhesin. For electron microscopy (15) cells ofstrain CCUG 17875 were incubated with biotinylated Le^b(C) or Le^a(D).
• FIG. 3 shows the characterization of the molecular weight of the BabA adhesin by the use of receptor overlay analysis (A, B) and receptor activity directed affinity tagging of BabA (C).
• FIG. 4 shows receptor activity directed affinity tagging and protein purification of the BabA adhesin.
• FIG. 5 shows the translated amino acid sequences for the babA and babB genes, corresponding to the N-terminal domain of the BabA adhesin.
• FIG. 6 shows the procentual inhibition ofH. pyloribinding to¹²⁵I-labeled Lewis b antigen for different preparations as a function of the antibody titre.
• FIG. 7 shows a Western blot detection of the BabA adhesin by the different antibody preparations.
• FIG. 8 shows four Western blot analyses ofH. pyloriproteins by the different antibody preparations.
DESCRIPTION OF THE INVENTION
• The blood group antigen binding adhesin, BabA, has now been biochemically characterized and purified by a novel technique, receptor Activity Directed Affinity Tagging (Retagging). Two genes, babA and babB were found to code for two different but very similar proteins. The present invention thus comprises a novel blood group antigen binding adhesin according toclaim1 and the subsequent claims. The DNA sequences are disclosed in appendices 1 (babA) and 2 (babB). The protein sequences is disclosed inappendix 3. The invention also includes any pharmaceutical composition comprising said adhesin protein and/or fractions thereof. Examples of such pharmaceutical compositions are for example medicaments for the prevention or treatment ofHelicobacter pyloriinduced gastritis, gastric and duodenal ulcers and gastric adenocarcinoma. Optionally said pharmaceutical composition additionally encompasses pharmaceutically acceptable excipients.
• Further, the present invention comprises the BAB-adhesin gene or genes for expression of an adhesin protein according to the invention. Said invention also comprises a novel method for the isolation and purification of said adhesin. The disclosed genes are contemplated to function as a cassette system, the organism alternating between these to avoid immunity in the host. It is very likely, that homologies of the disclosed sequences exist and additionally supplement said cassette function in other strains ofH. pylori. Also, genes corresponding to a homology of the first 40 amino acids or genes, corresponding to a homology of the last, about 300 amino acids, can function to this effect. It is further highly likely, thatHelicobacter pyloriis able to switch between several genes, similar to the disclosed genes, in a so-called cassette system.
• The invention additionally comprises monospecific antisera produced using the novel adhesin protein and/or fractions thereof. Said monospecific antisera is preferably produced according to any suitable, conventional method for producing monospecific antisera in vitro or in vivo, e.g. by inoculating a suitable animal. Such methods are familiar to a person skilled in the art. Antibodies raised in a suitable animal or in the patient to be treated, can subsequently be administered locally, e.g. orally to the patient.
• The invention further comprises the use of said monospecific antisera for the manufacturing of a test kit for quantitative or qualitative determinations of adhesin protein or fractions thereof in cells, tissues or body fluids.
• The invention further comprises the use of said adhesin protein or corresponding DNA for use in therapy or immunisation and/or in the manufacture of compositions for said uses. The invention specifically encompasses the use of said DNA for immunisation therapy and for the manufacture for compositions for such therapy. Preferably, in an immunisation therapy where said composition is administered orally to a patient, the adhesin protein, fractions thereof or said DNA is administered in combination with a pharmaceutically suitable immunostimulating agent. Examples of such agents include, but are not limited to the following: cholera toxin and/or derivatives thereof, heat labile toxins, such asE. colitoxin and similar agents. The composition according to the present invention can further include conventional and pharmaceutically acceptable adjuvants, familiar to a person skilled in the art of immunisation therapy. Preferably, in an immunisation therapy using the inventive DNA or fractions thereof, said DNA is preferably administered intramuscularly, whereby said DNA is incorporated in suitable plasmide carriers. An additional gene or genes encoding a suitable immunostimulating agent can preferably be incorporated in the same plasmide.
• Said immunisation therapies are not restricted to the above-described routes of administration, but can naturally be adapted to any one of the following routes of administration: oral, nasal, subcutaneous and intramuscular. Especially the oral and nasal methods of administration are promising, in particular for large-scale immunisations.
• The present inventors have surprisingly shown, that highly specific and therapeutically efficient polyclonal and/or monoclonal immunoglobulin preparations can be provided through the immunisation of an animal with an adhesin protein or fractions thereof, specific forH. pylori. When considering immunisation againstH. pylori, it is worth noting that the infection is known to be lifelong despite a vigorous immune response in the gastric mucosa. An increased local production of IgA in the mucosa is not necessarily enough and the administration of monospecific antibodies directed against a central virulens factor, such as the adhesin according to the present invention, may constitute a more effective approach.
• The term “immunisation” refers here to a method for inducing a continuous high level of antibody and/or cellular immunresponse. The term “animal” here preferentially denotes any member of the subphylum Vertebrata, a division that includes all animals, including mammals, which are characterized by a segmented bony or cartilaginous spinal column. All vertebrates have a functional immune system and respond to antigens by producing antibodies. The term “protein” is used here to denote a naturally occurring polypeptide and the term “polypeptide” is used here in its widest meaning, i.e. any amino acid polymer (dipeptide or longer) linked through peptide bonds. Accordingly the term “polypeptide” comprises proteins, oligopeptides, protein fragments, analogues, muteins, fusion proteins and the like. The term “antibody” as used in this context includes an antibody belonging to any of the immunological classes, such as immunoglobulins A, D, E, G or M. Of particular interest are nevertheless immunoglobulin A (IgA) since this is the principle immunoglobulin produced by the secretory system of warm-blooded animals. However, in cow colostrum, the main antibody class isIgG 1.
• Borén et al. have recently isolated and characterized a Lewis^bbinding protein with a molecular weight of about 73500 Da (See the priority applications SE 9602287-6 and SE 9701014-4, which are referred to in their entirety). This adhesin protein is thought to be a conserved structure and specific for pathogenic strains ofH. pylori. Said protein is specific for at least one of theH. pyloristrains included in the following group:CCUG 17875, NCTC 11637, A5, P466, G109, G56, Ba 185, Ba 99, 931 and 932.
• This adhesin protein or immunologically effective fractions thereof are characterized in that the following amino acid sequence is included:

• EDDGFYTSVGYQIGEAAQMV

  
  or homologues thereof.
• The following DNA sequence or homologues thereof is included in DNA for expression of said adhesin protein or fractions thereof:

• 5′-GAAGACGACGGCTTTTACACAAGCGTAGGCTATCAAATCGGTGAAGC
  CGCTCAAATGGTA-3′

• According to one embodiment of the invention, a pregnant mammal, preferably a cow or another suitable domestic animal, is immunised with said Lewis^bbinding adhesin protein or fractions thereof. The adhesin protein or fractions thereof is/are preferably injected intramuscularly or subcutaneously in the chosen animal, optionally together with suitable adjuvants. Examples of such adjuvants include, but are not limited to immunostimulating agents such as cholera toxin and/or derivatives thereof, heat labile toxins, such asE. colitoxin and similar, conventional agents, such as classical adjuvants including mineral and vegetable oils. Subsequent to the regimen of immunization, comprising a necessary amount of doses, including so called booster-doses, over a time span allowing for optimal immunoglobulin expression, milk or sera is collected from said animal. Preferably the cow colostrum, which is specially high in immunoglobulins, is collected. The specific immunoglobulin fraction according to the present invention is then separated and purified in a conventional manner, e g including separation of fats, protein precipitation and concentration by ultrafiltration.
• According to another embodiment of the invention, a bird, preferably a chicken or another suitable domestic bird, is immunized with said Lewis^bbinding adhesin protein or fractions thereof. The adhesin protein or fractions thereof is preferably injected intra-muscularly or subcutaneously in the chosen bird, optionally together with suitable adjuvants. Examples of such adjuvants include, but are not limited to immunostimulating agents such as cholera toxin and/or derivatives thereof, heat labile toxins, such asE. Colitoxin and similar, conventional agents, such as classical adjuvants including mineral and vegetable oils. Subsequent to the regimen of immunization, comprising a necessary amount of doses, including so called booster-doses, over a time span allowing for optimal immunoglobulin expression, sera or eggs is/are collected from said animal. Preferably the egg yolk, which is specially high in immunoglobulins, is collected. The specific immunoglobulin fraction according to the present invention is then separated and purified in a conventional manner, e g including protein precipitation and ultrafiltration. Alternatively, the egg yolk being of high nutritional value in addition to containing a high titer of specific antibodies according to the present invention, can be administered as such.
• According to a preferred embodiment of the present invention, monoclonal immunoglobulin is produced by establishing transgenic animals. Said transgenic animals can be chosen from the following group of species: mammals, e.g. cow, goat and rabbit, and birds: e.g. chicken, duck, turkey. The mammal most preferably used is cow and the most preferable bird is chicken. Further developments of transgenic animals such as mice and rats could also offer new possibilities. The choice of animal is naturally governed by availability and local adaptation.
• According to one embodiment, a stock of transgenic animals according to the present invention, adapted to the local conditions, are kept locally, e.g. in villages in developing countries to function as local units for the production of immunoglobulins for oral administration. For example transgenic cows, goats or chicken are suitable for this purpose and preferably chicken are used. Consumption of the milk or preferably the eggs, produced by the transgenic animals, can help to eradicate presently very difficult infectious diseases, e.g. diseases caused byH. pylori.
• According to yet another embodiment of the present invention, monoclonal antibodies can be produced using the hybridoma method. The hybridoma method is well known to a skilled worker in the field of biochemistry and it is described e.g. in Galfre, G. And Milstein, C., Preparation of monoclonal antibodies: strategies and procedures (Methods in Enzymology, 73:3-46, 1981). A suitable host animal is immunized with the Lewis^bbinding adhesin protein or fractions thereof. When the immunization is accomplished, the animal is sacrificed, spleen cells collected and fused with cells from a neoplastic cell line, preferably myeloma cells. By choosing the growth conditions, the successfully fused hybridoma cells can be selected. The monoclonal antibodies produced by the hybridoma cell line can then be administered orally in a regimen for treatment and/or prevention ofH. pyloriinfections.
• Preferably the polyclonal and/or monoclonal antibodies are purified prior to administration and, more preferably, admixed with pharmaceutically suitable carriers and/or adjuvants. Examples of suitable carriers are saline, pharmaceutically acceptable fats, oils, carbohydrates and proteins. The carrier or carriers is/are preferably chosen so that the solubility and absorption of the immunoglobulin in the mucus layer lining the stomach is enhanced. Using suitable adjuvants the stability, therapeutic efficiency and nutritional value of the composition can be improved. To improve stability under storage, the immunoglobulin composition can be lyophilized. Regardless of the exact preparation and formulation, it is of central importance to avoid denaturating the immunoglobulins.
• The higher specificity, exhibited by the immunoglobulin preparation of polyclonal and/or monoclonal antibodies according to the invention, makes it possible use substantially lower doses compared to those presently used, thus lowering the cost and improving the availability of the treatment. The use of specific, monoclonal antibodies can make it possible to further lower the doses. The doses are in all cases a function of the antibody titer of the preparation. A high titer naturally allows the use of lower doses.
• According to one embodiment of the invention, an immunoglobulin preparation is manufactured as follows: an animal is immunized with a Lewis^bbinding adhesin protein or fractions thereof, expressed byHelicobacter pylori, the immunoglobulin fraction is isolated from a excretion of said animal and subsequently purified. The purified immunoglobulin composition is admixed with suitable carriers and adjuvants to form a immunoglobulin preparation for the prevention or treatment ofH. pyloriinfections. In cases where the antibody titer is sufficiently high and the other constituents of the immunoglobulin composition isolated from the animal are harmless, for example in the case of colostrum from immunized cows or egg yolk from immunized chicken, there is always the option of administering the colostrum or egg yolk to the patient without any further treatment of the colostrum or egg yolk.
• The immunoglobulin composition according to the invention is preferably administered orally to the patient, in the smallest therapeutically or prophylactically effective dose. Presently conceived are doses in the interval of 0.1 to 1000 mg/day, preferably in the interval of 0.1 to 100 mg/day. The chosen doses naturally depend on the antibody titer of the preparation in question. The exact doses and the regimen of administration can be chosen by the physician responsible for the patient, infected byHelicobacter pylori. Routine experimentation and later, with increasing experience of this method, empirical information will suffice to establish the required amount. Multiple dosages may be used, as needed, to provide the desired level of therapeutic or profylactic effect. The immunoglobulin preparations according to the present invention can also, being free from adverse side effects and imposing practically no danger of overdosing, be taken prophylactically or therapeutically by a person without medical supervision.
• A therapeutical effect can be attained, except with the specific antibody according to the present invention, also with at least two Fab-fragments of said antibody. Said embodiment is also encompassed by the scope of the present invention.
• According to yet another embodiment, avirulent microorganisms, preferably bacteria, are used as expression systems for the specific antibody according to the present invention. An “avirulent microorganism” in this context is a microorganism which has the ability to colonize and replicate in an infected individual, but which does not cause disease symptoms associated with virulent strains of the same species of microorganism. The definition inherent in the GRAS (Generally Regarded As Safe) concept can be applied here. A GRAS-organism is suitable for use according to the present invention, provided that the organism externalises the antibody or can be modified to this effect. The term “microorganism” as used herein includes bacteria, protozoa and unicellular fungi. Preferably, bacteria are used as expression systems, e.g. bacteria of the genusLactobacillus, StreptococcusorEnterobacteriae. The above mentioned expression system can be utilised in vitro for the production of the specific antibody according to the present invention or, according to a further embodiment of the invention, the micro-organism constituting the expression system can be administered directly to the patient. The micro-organisms can be harvested and administered as such, but they are preferably mixed with a suitable carrier, mixed in a suitable foodstuff, lyophilised, encapsulated or treated in any other conventional way, used for the delivery of viable microorganisms to the gastrointestinal tract.
• According to yet another embodiment, avirulent microorganisms, preferably bacteria, are used as expression systems for the specific adhesin protein according to the present invention. An “avirulent microorganism” in this context is a microorganism which has the ability to colonize and replicate in an infected individual, but which does not cause disease symptoms associated with virulent strains of the same species of microorganism. The definition inherent in the GRAS (Generally Regarded As Safe) concept can be applied here. A GRAS-organism is suitable for use according to the present invention, provided that the organism externalises the adhesin protein or can be modified to this effect. The term “microorganism” as used herein includes bacteria, protozoa and unicellular fungi. Preferably, bacteria are used as expression systems, e.g. bacteria of the genusLactobacillus, StreptococcusorEnterobacteriae. The above mentioned expression system can be utilised in vitro for the production of the specific adhesin according to the present invention or, according to a further embodiment of the invention, the micro-organism constituting the expression system can be administered directly to the patient. The micro-organisms can be harvested and administered as such, but they are preferably mixed with a suitable carrier, mixed in a suitable foodstuff, lyophilised, encapsulated or treated in any other conventional way, used for the delivery of viable micro-organisms to the gastrointestinal tract.
• The exact doses and the regimen of administration of said micro-organisms can be chosen by the physician responsible for the patient, infected byHelicobacter pylori. Routine experimentation and later, with increasing experience of this method, empirical information will suffice to establish the required amount. Multiple dosages may be used, as needed, to provide the desired level of therapeutic or prophylactic effect. The avirulent micro-organism expressing the antibody or adhesin protein according to the present invention can also, being free from adverse side effects and imposing practically no danger of overdosing, be taken prophylactically or therapeutically by a person without medical supervision. A preferred carrier in this specific application is a foodstuff, e.g. a fermented product such as fermented cereal or dairy product.
• The creation of previously mentioned expression systems and still earlier mentioned methods of creating hybridomas and transgenic animals can include steps involving recombinant DNA techniques. Recombinant DNA techniques are now sufficiently well known and widespread so as to be considered routine. In very general and broad terms, recombinant DNA techniques consist of transferring part of the genetic material of one organism into a second organism, so that the transferred genetic material becomes a permanent part of the genetic material of the organism to which it is transferred. Methods for achieving this are well known and the mere choice of specific methods for achieving the objectives, set out in the present description and claims, fall under the scope of the invention.
• It is possible, thatH. pylorialone or together with related slow-acting bacteria are involved in the genesis and aggravation of other chronic inflammatory diseases in the gastrointestinal tract. It is obvious for a skilled practitioner how to modify the present invention, within the scope of the claims, to gain utility in the treatment and/or prevention of such diseases. Examples of such diseases are ulcerative colitis, Crohn's disease, sarcoidosis, Wegener's granulomatosis and other vasculithic disorders, as well as various neoplasms, including carcinomas of the colon, pancreas and prostate.
EXAMPLES
• H.pyloristrain CCUG 17875 was obtained from CCUG, Göteborg, Sweden. Strain A5, a gastric ulcer isolate, from Astra Arcus, Södertälje, Sweden. Strains P466 and MO19 were described previously (Borén et. al, Science, 262, 1892 (1993)).Strain 26695 came from Dr. K. A. Eaton, The Ohio State University and its genome was recently sequenced by TIGR, Rockville, Md., USA. The panel of 45H. pyloriclinical isolates came from the University Hospital in Uppsala, Sweden. Bacteria were grown at 37° C. in 10% CO2 and 5% O2 for 48 h.
• All blood group antigen glycoconjugates used, i.e. semi-synthetic glycoproteins constructed by the conjugation of purified fucosylated oligosacharides to serum albumin were from IsoSep AB, Tullinge, Sweden. The RIA was performed according to Falk et al. (Meth. Enzymol., 236, 353, 1994) with some modifications; the H-1, Le^b, Le^a, H-2, Le^xand Le^yglycoconjugates were 125I-labeled by the Chloramine T method. 1 ml of bacteria (A600=OD 0.10) was incubated with 300 ng of 125I-labelled conjugate (i.e. an excess of receptors) for 30 min. in phosphate buffered saline (PBS), 0.5% albumin, 0.05% Tween-20 (BB-buffer). After centrifugation, 125I-activity in the bacterial pellet was measured by gamma scintillation counting.
• In this study the present inventors' first biochemically characterized and identified theH. pyloriblood group antigen binding adhesin, BabA.H. pyloristrains were analysed for binding to soluble¹²⁵I-labeled fucosylated blood group antigens (FIG. 1A). Binding of these strains to the soluble blood group antigens correlate with adherence in situ. The prevalence of blood group antigen binding (BAB)-activity was assessed among 45 clinicalH. pyloriisolates and the majority of the isolates, 71%, express Le^bantigen binding properties (data not shown). In contrast, none of the reference strains (FIG. 1A), or strains from the panel of 45 clinical isolates, bind to the Le^a, H-2, Le^x, or Le^yantigens. These results support our previous findings of high receptor specificity for the Le^band H-1 blood group antigens and demonstrate the high prevalence of BAB activity among clinical isolates.
• Based on the presence or absence of virulence factors such as the Cytotoxin associated gene A (CagA) and the Vacuolating cytotoxin A (VacA),H. pyloristrains are classified as type I or type II strains.H. pyloriisolates from patients with duodenal ulcers most often express the VacA and the CagA-proteins, i.e. type-I strains. By definition, type II strains express neither markers. Twenty-one clinical isolates previously defined for expression of CagA and VacA were analysed for Le^bantigen binding properties. Expression of CagA was found to correlate with bacterial binding to the Le^bantigen (Table 1). The cagA gene belongs to a 40 kb pathogenicity island that encodes components of secretion and transport systems. These findings could indicate functional crosstalk between the cag pathogenicity island and the BabA adhesin gene, for the correct presentation of the BabA adhesin protein in the bacterial outer membrane.
• To further characterize BabA, the present inventors determined the affinity constant (K_a) between BabA and the Le^bantigen. Since K_a-values are based on equilibrium conditions (13), the present inventors first analysed the interaction by performing receptor displacement analysis.H. pyloriCCUG 17875 (positive for Le^bbinding,FIG. 1 A) was first incubated with¹²⁵I-labeled Le^bglycoconjugate. Then unlabeled Le^bglycoconjugate was added in a dilution series. The unlabeled Le^bconjugate displaced the bound¹²⁵I-labeled Le^bglycoconjugate efficiently (FIG. 1 B). The results demonstrate that the receptor-adhesin complex formed is in a true state of equilibrium. An equivalent excess of Le^aglycoconjugate did not dissociate the Le^b-BabA complex, verifying the high receptor specificity (FIG. 1B). The K_a-value for the Le^b-BabA complex ofstrain CCUG 17875 was titrated with Le^bglycoconjugate in concentrations from 10 ng to 260 ng/ml and determined to be of an high affinity close to 1×10¹⁰M⁻¹, (FIG. 1C). The number of Le^bglycoconjugate molecules bound to BabA on the bacterial cell surface was calculated to be around 500 per cell. This number is similar to the number or fimbriae organelles on the surface ofE. coli(14). However, for the BabA adhesin, the calculations are based on the assumption that the majority of bacterial cells in the experiment exhibit an equal number of adhesin molecules with Le^bantigen binding properties.

• TABLE 1
  BAB activity amongH. pyloriType I and Type II strains

  	Type	Strain	BAB Activity
  	Type I	CCUG 17874	−
  	CagA+, VacA+	G39	−
  		G11	−
  		G20	−
  		G27	+
  		G56	+
  		G106	−
  		G109	+
  		932	+
  		Bal85	+
  		87A300	+
  	Type Ia	931	+
  	CagA+, VacA−	Ba99	+
  		Ba179	+
  		Ba194	+
  	Type Ib	G12	−
  	CagA−, VacA+
  	TypeId	G104	−
  	ΔcagA, VacA+	Tx30	−
  	Type II	G21	−
  	CagA−, VacA−	G50	−
  		G198	−

• To determine the prevalence of BabA in the bacterial population, strainCCUG 17875 was incubated with Le^bor Le^aantigens, and bacterial binding activity was visualised by confocal fluorescence microscopy (FIG. 2, upper panel). The analyses demonstrate the high prevalence of BabA binding activity in the bacterial population to the Le^bantigen (FIG. 2A, green staining) and the complete lack of binding to the Le^aantigen (FIG. 2B, red counter staining).
• Next, the localisation and density of BabA on the bacterial cell surfaces was investigated by immunogold electron microscopy. The Le^bantigen binding activity of the adhesin localised gold particles to the bacterial outer membrane (FIG. 2C). Individual bacterial cells exhibit an equal number of gold particles (data not shown). When the Le^bantigen was substituted with the Le^aantigen (lacking receptor activity), no gold particles were detected (FIG. 2D).
• The molecular weight of BabA was characterized by receptor overlay analysis. A protein extract ofstrain CCUG 17875 was separated on SDS-PAGE and blotted to a membrane. The membrane was incubated with biotinylated Le^bglycoconjugate, followed by detection with streptavidin and enhanced chemiluminescence. The BabA adhesin activity corresponds to a single 74 kDa band (FIG. 3A). The 40 kDa band is presumably endogenous peroxidase activity since it stains independently of the Le^bconjugate overlay (lane 3). BabA was very heat stable and could regain some activity after heating to 97° C. (FIG. 3A, lane 2). The panel of strains exhibited the same molecular weight of BabA (FIG. 3B).
• To purify BabA, a novel technique was developed, Receptor Activity Directed Affinity Tagging (ReTagging). Multi-functional crosslinking agents with radiolabeled donating tags have been previously used for receptor-ligand characterization studies. However, the use of affinity donating tags, such as biotin residues presented on flexible spacer structures, adds a new dimension to the applicability of crosslinker technology. An affinity tag, biotin, is transferred to the adhesin protein by the receptor activity and is used for further identification and for affinity purification of the adhesin part of the interaction, by streptavidin (FIG. 4A, B).
• A multi-functional crosslinking agent with a biotin donating handle was attached to the Le^bglycoconjugate. The receptor activity of the Le^bglycoconjugate subsequently directed the targeted biotin tagging of the BabA adhesin protein (FIG. 4A, B). After crosslinking, the bacterial protein from strains A5, P466, andCCUG 17875 were separated on SDS-PAGE. Immunodetection with streptavidin demonstrated a biotin tagged protein, with the molecular weight of 74 kDa (FIG. 3C) (28), These results support the estimates of the molecular weight from the previous overlay analyses (FIG. 3B). Strain MO19 devoid of Le^bantigen binding properties (FIG. 3B) (FIG. 1A), was negative for binding also in this set of analyses (FIG. 3C).
• The high specificity in the ReTagging technique provided a method for purification of the adhesin protein. StrainsCCUG 17875 and A5, that both express the BabA adhesin (FIG. 1A) were processed by the ReTagging technique using crosslinker labelled Le^breceptor conjugate as the biotin donor. After crosslinking, bacteria were suspended in SDS sample buffer. Streptavidin coated magnetic beads were subsequently added to the solubilised proteins, and biotin tagged BabA was extracted (FIG. 4C). The N-terminal 20 amino acid sequences of the BabA adhesins from strains CCUG 17875 (Australia) and A5 (Sweden) were found to be identical, indicating a biologically conserved protein (FIG. 5). Recently, a series of outer membrane proteins fromH. pyloriwere characterized. These proteins, HopA-E, are homologous in their N-terminal sequences to BabA (17), possible indicating a motif for a common secretion mechanism. The biotin tagged BabA adhesin was purified more than 3000-fold from the cell extract, and the yield was calculated to 20%. However, based on data from the Scatchard plots, the level of available BabA adhesin would be about 5-times higher, i.e. approximately 1 mg adhesin/750 mg bacterial protein, which nevertheless could be the reason for the high signal to noise ratio (FIG. 3B). The purification of BabA via the ReTagging technique indicates the potential of this technique for the purification of lectins in complex receptor-ligand interactions, such as the selectin family of cell adhesion molecules.
• To clone the gene encoding BabA, the N-terminal 20 aa sequence was utilised for the construction of degenerate primers (18). Two sets of clones were identified which both encode two different but very similar proteins. Both genes code for proteins having almost identical N-terminal domains and identical C-terminal domains, complicating the identification of the functional BabA gene. (FIG. 5). To identify the corresponding gene, the BabA adhesin was purified in large scale by ReTagging. This provided enough protein for an extended amino terminal sequence. 41 amino acids were identified and these residues unambiguously discriminated between the two genes by the differences in aa-positions 28, 35, 37, 38 and 41 (FIG. 5). The gene encoding BabA was named babA and correspond to a basic protein with a pI of 9.4 and a molecular weight of 78 kDa, i.e. of slightly higher molecular weight than that predicted from the SDS PAGE analyses (FIG. 3). The other gene, babB, corresponds to a protein of a calculated molecular weight of 75.5 kDa. In contrast to babA, the babB gene contains a predicted translational initiation codon (FIG. 5). This could indicate the existence of a third bab gene in the genome or mechanisms for recombination activities. Interestingly, the bab-genes were also detected in strains lacking Lewis b binding properties (data not shown). Gene cassette systems have been shown to promote antigenic variation inNeisseria gonorrhoeae(19). Another possibility would be the presence of similar genes coding for adhesins with differences in receptor specificity/host tissue tropism (20). Gene inactivation experiments targeting the bab-genes could aid in understanding this complex gene organisation.
• Immunisation experiments with adhesins fromBordetella pertussis(21) indicate the potential for outer membrane proteins to act as vaccine candidates (discussed in ref. 22). In a mouse model for persistentH. pyloriinfection, oral immunisation withH. pyloriantigens proved protective againstH. pyloriinfection (10). However, results from animal models are difficult to evaluate for human specific pathogens, such asH. pyloriand Polio virus. For Polio, an animal model has been achieved by expressing the virus receptor in transgenic mice (23). A similar strategy was taken forH. pylori. A transgenic mouse was constructed by the use of an α1,3/4-fucosyltransferase, driving the synthesis of the human specific Le^bantigen in the gastrointestinal tract (24). The Lewis b mouse can be useful for the evaluation of the role of the BabA adhesin as a colonisation/virulence factor and in addition for the evaluation of BabA as a vaccine candidate against acid peptic disease and gastric adenocarcinoma.
• In the present study the ReTagging technique was used for the purification of the adhesin part of the microbial receptor-ligand interaction. By the use of purified adhesin/lectin-protein, the ReTagging technique could, in addition, be used to further study the receptor part of the interaction. Identification of the biologically active receptor structure, carrying Le^boligosaccharides, would aid in the understanding of the mechanisms supporting the chronicH. pyloriinfection.
• Inhibition ofH. pyloribinding to¹²⁵I-labeled Lewis b antigen by preparations is presented graphically, as a function of antibody concentration (mg/ml) inFIG. 6: 1 ml aliquots ofH. pyloribacteria (A₆₀₀=OD 0.10) were pre-incubated with dilution series of antibody preparations, in 0.01-10 mg/ml for 2 hours in phosphate buffered saline (PBS), 0.5% albumin, 0.05% Tween-20. Then 500 ng of¹²⁵I-labeled conjugate (i.e. an excess of receptor structure) was added and incubated for 30 minutes. After centrifugation,¹²⁵I-activity in the bacterial pellet was measured by gamma scintillation counting. The Lewis b blood group antigen glycoconjugates used, i.e. semi-synthetic glycoproteins constructed by the conjugation of purified fucosylated oligosaccharides to serum albumin were from IsoSep AB, Tullinge, Sweden.
• Western blot detection of the BabA adhesin by the different antibody preparations is presented inFIG. 7: Molecular weight rainbow marker (2 μL) from Amersham, Buckinghamshire, England, was dissolved in SDS sample buffer (lane 1). Approx. 100 ng of purified BabA adhesin (approx. 74 kDa with degradation product of approx. 55 kDa) was dissolved in SDS sample buffer (lane 2). SDS solubilized protein extracts ofstrain CCUG 17875 were prepared by dissolving the bacterial pellet corresponding to 0.15 ml of bacteria (A₆₀₀=OD 0.10) by SDS sample buffer (lane 3). The 3 protein samples were then boiled at 100° C. for 5 minutes. The proteins were separated on SDS-PAGE, and transferred to a PVDF-membrane for Western blot immuno analysis. Five sets of PVDF-membranes were prepared. The PVDF membranes were blocked/incubated overnight with 4% human sera/plasma, in phosphate buffered saline, from a patient with noH. pyloriinfection, i.e. with no serum antibodies againstH. pylori. The membrane was then washed in phosphate buffered saline (PBS), 0.5% albumin, 0.05% Tween-20, followed by the addition of the antibody preparations. The sets of membranes were incubated with the following 5 antibody preparations; 1) pooled human sera fromH. pyloriinfected patients, diluted 1:500. 2) Chicken antibodies (positive) 1 mg/ml diluted 1:100×, 3) Bovine I preparation of antibodies, 1 mg/ml diluted 1:100×. 4) Bovine II preparation of antibodies, 1 mg/ml diluted 1:100×. 5) Bovine III preparation of antibodies, 1 mg/ml diluted 1:100× (indicated in the figure). These antibodies were incubated with the membrane for 2 hours followed by extensive washings in phosphate buffered saline (PBS), 0.05% Tween-20, followed by the addition of secondary anti-human, anti-chicken, and anti-bovine antibodies labeled with HRP-peroxidase (from DAKO, Denmark), all diluted 1:2000×. Membranes were incubated for 1 hour, followed by extensive washings in phosphate buffered saline (PBS), 0.05% Tween-20. The membranes were developed with enhanced chemoluminescens (ECL) from Amersham. The results show, that the antigenic response against the adhesin is strongly enhanced in the bovine preparations. This finding is also supported by the inhibition data inFIG. 6.
• Western blot analyses ofH. pyloriproteins by the different antibody preparations are shown inFIG. 8. 2 clinical isolates (1-2) from Dr. Lars Engstrand, Department of Clinical Microbiology and Cancerepidemiology, University Hospital, Uppsala, Sweden and strain CCUG 17875 (3), from Culture Collection, University of Göteborg, Department of Clinical Bacteriology, Göteborg, Sweden, and strain 52 (4) from Prof. Torkel Wadström, Dept. Medical Microbiology, Lunds University, were prepared for SDS-PAGE electrophoresis. Bacterial pellets corresponding to 0.15 ml of bacteria (A₆₀₀=OD 0.10) were dissolved in SDS sample buffer and heated to 100° C. for 5 minutes. The proteins were separated on SDS-PAGE, and transferred to PVDF-membranes for Western blot immuno analysis. The western blot analyses were as described above, i.e. the sets of membranes were incubated with the following 4 antibody preparations; 1) pooled human sera fromH. pyloriinfected patients, diluted 1:500. 2) Chicken antibodies (positive) 1 mg/ml diluted 1:100×, 3) Bovine I preparation of antibodies, 1 mg/ml diluted 1:100×. 4) Bovine III preparation of antibodies, 1 mg/ml diluted 1:100× (indicated in the figure). These antibodies were incubated with the membrane for 2 hours followed by extensive washings in phosphate buffered saline (PBS), 0.05% Tween-20, followed by the addition of secondary anti-human, anti-chicken, and anti-bovine antibodies labeled with HRP-peroxidase (from DAKO, Denmark), all diluted 1:2000×. Membranes were incubated for 1 hour, followed by extensive washings in phosphate buffered saline (PBS), 0.05% Tween-20. The membranes were developed with enhanced chemoluminescens (ECL) from Amersham. The results show, that the chicken antibodies and the bovine preparations reacts nearly identically against all four strains, indicating conserved properties in strains of different geographical origin.
• Although the invention has been described with regard to its preferred embodiments, which constitute the best mode presently known to the inventors, it should be understood that various changes and modifications as would be obvious to one having the ordinary skill in this art may be made without departing from the scope of the invention which is set forth in the claims appended hereto.
REFERENCES AND NOTES
• 1. J. R. Warren,Lancet, i, 1273, 1983, B. Marshall,Lancet, i, 1273, 1983.
• 2. A. Dubois,Emerging Infectious Diseases1, 79 (1995).
• 3. M. J. Blaser,Sci. Amer.2, 92 (1996).
• 4. 3. M. J. Blaser,Trends Microbiol.7, 255 (1993), D. E. Kirschner and M. J. Blaser,J. Theor. Biol.176, 281 (1995).
• 5. P. Falk, T. Borén, and S, Normark,Meth. Enzymol.236, 353 (1994).
• 6. D. G. Evans, D. J. Evans Jr., J. J. Moulds and D. Y. Graham,Infect. Immun.56, 2896 (1988), S. Hirmo, M. Utt, M. Ringner and T. Wadström,FEMS Immunol. and Med. Microbiol.10, 301 (1995), T. Saitoh, et alFEBS Lett.282, 385 (1991).
• 7. T. Borén, P. Falk, K. A. Roth, G. Larson, and S, Normark,Science.262, 1892 (1993), P. Falk, et alProc. Natl. Acad. Sci. U.S.A.90, 2035 (1993).
• 8.H.pyloristrain CCUG 17875 was obtained from CCUG, Göteborg, Sweden. Strain A5, a gastric ulcer isolate, came from Astra Arcus, Södertälje, Sweden. Strains P466 and MO19 were described previously (7).Strain 26695 came from Dr. K A. Eaton, The Ohio State University, and its genome was recently sequenced by The Institute for Genomic Research (TIGR), Rockville, Md. (J.-F. Tomb, et al, abstract 3B: 059, IX International Workshop on Gastroduodenal Pathology andHelicobacter pylori, Copenhagen, Denmark, 1996). The panel of 45H. pyloriclinical isolates came from the University Hospital in Uppsala, Sweden. Bacteria were grown at 37(C in 10% CO₂and 5% O₂for 48 h.
• 9. All blood group antigen glycoconjugates used, i.e. semi-synthetic glycoproteins constructed by the conjugation of purified fucosylated oligosaccharides to serum albumin (7, 25), were from IsoSep AB, Tullinge, Sweden. The RIA was performed according to ref. 26 with some modifications; The H-1, Le^b, Le^a, H-2, Le^x, and Le^yglycoconjugates were¹²⁵I-labeled by the Chloramine T method. 1 ml of bacteria (A₆₀₀=OD 0.10) was incubated with 300 ng of¹²⁵I-labeled conjugate (i.e. an excess of receptors) for 30 min. in phosphate buffered saline (PBS), 0.5% albumin, 0.05% Tween-20 (BB-buffer). After centrifugation,¹²⁵I-activity in the bacterial pellet was measured by gamma scintillation counting.
• 10. A. Covacci, et al,Proc. Natl. Acad. Sci. U.S.A.90, 5791 (1993), M. Marchetti, et al,Science267, 1655 (1995).
• 11 S. Censini et al,Proc. Natl. Acad. Sci. U.S.A.93, 14648, (1996).
• 12. Z. Xiang, et al,Infect. Immun.63, 94 (1995).
• 13. A. G. Scatchard,Ann. N.Y. Acad. Sci.51, 600 (1949).
• 14. O. Mol, and B. Oudega,FEMS. Microbiol. Reviews,19, 25 (1996).
• 15. Confocal microscopy was performed on a Nikon/Multiprobe 2001 instrument (Molecular Dynamics, Sunnyvale, Calif.). Electron microscopy was performed on aJEOL 100 CX instrument.
• 16. J. Brunner,Trends in Cell Biol.6, 154 (1996), J. D. Bleil and P. M. Wassarman,Proc. Natl. Acad. Sci. U.S.A.87, 5563, (1990).
• 17. M. M. Exner, P. Doig, T. J. Trust, and R. E. W. Hancock,Infect. Immun.63, 1567 (1995), P. Doig, M. M. Exner, R. E. W. Hancock and T. J. Trust,J. Bacteriol.177, 5447 (1995).
• 18. The BabA N-terminal sequence analysis was used to make degenerate oligonucleotides, which were used in PCR to obtain an amplified fragment from the chromosome of the babA gene. A 59 bp fragment was identified and used as probe for the screening of a low-copy plasmide (pACYC184) library of Sau3A partially digested chromosomal DNA fromstrain CCUG 17875.
• 19. P. Hagblom, E. Segal, E. Billyard, and M. So,Nature,315, 156 (1985), R. Haas and T. F. Meyer,Cell,44, 107 (1986).
• 20. A.-B. Jonsson, D. Ilver, P. Falk, J. Pepose, and S, Normark,Mol. Microbiol,13, 403 (1994), N. Strömberg, P. G. Nyholm, I. Pascher, and S, Normark,Proc. Natl. Acad. Sci. USA88, 9340 (1991).
• 21. A. Kimura, K. T. Mountzouros, D. A. Relman, S. Falkow, J. L. Cowell,Infect. Immun.58, 7 (1990).
• 22. T. Borén, and P. Falk,Sci. Amer., Sci. &Med.4 (1994), L. S. Tompkins and S. Falkow, Science 267, 1621 (1995).
• 23. R. B. Ren, et al,Cell63, 353 (1990).
• 24. P. G. Falk, L. Bry, J. Holgersson, and J. I. Gordon,Proc. Natl. Acad. Sci. U.S.A.92, 1515 (1995).
• 25. P. D. Rye,Nature Biotechnology.2, 155 (1996).
• 26 P. Falk, T. Borén, D. Haslam, M. G. Caparon,Meth. Cell Biol.45, 161 (1994)
• 27. Cell extracts were prepared in SDS sample buffer without mercapto ethanol and heated at 37° C. or 97° C. for 10 min. before separation on SDS-PAGE. Proteins were blotted onto a PVDF membrane. The membrane was incubated with 1 μg/ml biotinylated Le^bglycoconjugate or biotinylated albumin (negative control) overnight, labelled as described in ref. 7. After washing in PBS/0.05% Tween-20, the biotinylated structures bound by the BabA band were probed by HRP-streptavidin and detected using ECL reagents (Amersham, Buckinghamshire, England).
• 28. The bacterial suspension was incubated with Le^bglycoconjugate, to which the Sulfo-SBED crosslinker (Pierce, Rockville, Ill.) had been conjugated by the N-hydroxysuccinimide ester (NHS), according to the manufacturers specifications. The aryl azide crosslinker group was activated by UV irradiation (360 nm). Bacteria were washed with PBS pH 7.6, 0.05% Tween-20 and protease inhibitors (EDTA and benzamidine) under reducing conditions with 50 mM dithiothreitol (DTT). Bacterial proteins were separated on SDS-PAGE, and the biotin tagged BabA protein was detected by immunodetection (PVDF membrane/HRP-streptavidin and ECL) (FIG. 3C).
• 29. StrainsCCUG 17875 and A5 were first processed by crosslinking and DTT treatment, as above (28), followed by solubilisation in SDS sample buffer. The biotin tagged BabA protein was then extracted with streptavidin coated magnetic beads (Advanced Magnetics Inc., Cambridge, Mass.). The beads were boiled in SDS sample buffer, and bound proteins were eluted and alkylated. The protein preparation was further fractionated by preparative SDS-PAGE (Prep-Cell 491, BioRad, Hercules, Calif.). Fractions with the biotin tagged protein, i.e. the BabA fractions, were identified by immunodetection using streptavidin/ECL. The pooled BabA preparation was then separated on SDS-PAGE and transferred to PVDF membrane. The BabA band was excised and the BabA protein was N-terminally sequenced using a Procise™ 494 instrument (Applied Biosystems, Foster City, Calif.).

Claims (30)

1. A vaccine comprising a nucleotide sequence selected from the group consisting of SEQ ID NO:1, SEQ ID NO:2, and SEQ ID NO:6.

2. A test kit comprising a monospecific antisera that recognizes a BabA antigen and comprises an immunoglobulin that binds said BabA antigen via a variable region, wherein said Bab A adhesin protein is produced using an isolated and purified bacterial blood group antigen binding protein (BabA) fromHelicobacter pylorispecies, wherein said BabA protein binds specifically to fucosylated Lewis^btype I and H-1 blood group antigen-glycoconjugates and,

wherein said BabA protein contains less than 20% bacterial protein impurities, has a molecular weight in the interval of 73 to 75 kDa as determined by sodium dodecyl sulphate-polyacrylamide gel electrophoresis (SDS-PAGE), and is not a HopA, HopB, HopC, HopD, or HopE protein.

3. An isolated monospecific immunoglobulin composition from sera which recognizes a BabA antigen and binds said BabA antigen via a variable region and exhibits specific activity to a BabA adhesion protein fromHelicobacter pylori, wherein said adhesin protein binds Lewis^band H-1 blood group antigen-glycoconjugates and is not a HopA, HopB, HopC, HopD or HopE protein.

4. The immunoglobulin composition according toclaim 3, wherein said BabA adhesin protein has a molecular weight in the interval of about 70 to 77 kDa as determined by SDS-PAGE.

5. The immunoglobulin composition according to any one ofclaims 3 or4 wherein said BabA adhesin protein comprises the following amino acid sequence: EDDGFYTSVGYQIGEAAQMV (SEQ ID NO:5) or homologues thereof.

6. An isolated monospecific antibody, which recognizes a BabA antigen and binds said BabA antigen via a variable region and exhibits specific activity to a BabA adhesion protein fromHelicobacter pylorithat binds Lewis^band H-1 blood group antigen-glycoconjugates and is not a HopA, HopB, HipC, HopD or HopE protein.

7. The antibody according toclaim 6, wherein said BabA adhesin protein has a molecular weight in the interval of about 70 to 77 kD as determined by SDS-PAGE.

8. The antibody according toclaim 6, wherein said BabA adhesin protein comprises the following amino acid sequence: EDDGFYTSVGYQIGEAAQMV (SEQ ID NO:5) or homologues thereof.

9. The antibody according toclaim 6, wherein said antibody is a monoclonal antibody.

10. A method of manufacturing an immunoglobulin composition according toclaim 3, comprising the following steps:

immunizing an animal with Lewis^bbinding protein or fractions thereof, expressed byHelicobacter pylori,

isolating the immunoglobulin fraction from an excretion of said host animal, and

purifying the immunoglobulin preparation to obtain an isolated monospecific immunoglobulin composition.

11. The method according toclaim 10, wherein said animal is a cow and the immunoglobulin fraction is isolated from the milk, preferably the colostrum thereof.

12. The method according toclaim 10, wherein said animal is a chicken and the immunoglobulin fraction is isolated from the egg yolk thereof.

13. A method of manufacturing an antibody according toclaim 6, wherein the method comprises the following steps:

immunizing an animal with a Lewis^bbinding protein (BabA) or fractions thereof, expressed byHelicobacter pylori, fusing immunised, immunoglobulin producing cells with a neoplastic cell line, selecting and growing cells expressing said antibody, and purifying the antibodies.

14. The method ofclaim 13, further comprising expressing said antibody by a culture of viable microorganisms in an expression system, where said microorganism or organisms are generally recognized as safe (GRAS) and genetically modified to express said antibody.

15. The method according toclaim 14, wherein said microorganism is selected from the group consisting of bacteria of the speciesLactobacillus, StaphylococcusandEnteriobacteriacea.

16. A pharmaceutical preparation for treating an individual having or identified as being at risk of developingHelicobacter pyloriinfection, gastric ulcers or acid peptic disease in humans comprising the immunoglobulin composition according toclaim 3.

17. A method of treating an individual having or identified as being at risk of developing gastric ulcers comprising administering to a subject in need thereof the immunoglobulin composition according toclaim 3.

18. A method of treating an individual having or identified as being at risk of developing acid peptic disease comprising administering to a subject in need thereof the immunoglobulin composition according toclaim 3.

19. A pharmaceutical product for treating an individual having or being identified at risk of developingHelicobacter pyloriinfections, gastric ulcers or acid peptic disease in humans, comprising the antibody according toclaim 6.

20. A pharmaceutical product for treating an individual having or being identified at risk of developing gastric ulcers comprising the antibody according toclaim 6.

21. A pharmaceutical product for the treating an individual having or being identified at risk of developing peptic disease comprising the antibody according toclaim 6.

22. The method according toclaim 18, wherein said subject is human and said immunoglobulin composition is administered orally.

23. A method for treating a human having or being identified at risk of developingHelicobacter pyloriinfections, comprising orally administering an effective amount of an antibody according toclaim 6 to said human.

24. A method of treating a human having or being identified at risk of developingHelicobacter pyloriinfections, said method comprising orally administering an effective amount of a culture of viable microorganisms in an expression system, wherein said microorganism or organisms are generally recognized as safe (GRAS) and genetically modified to express an antibody according toclaim 8 or9.

25. An expression system comprising a culture of viable microorganisms wherein said microorganism or organisms are generally recognized as safe (GRAS) and genetically modified to express an antibody according toclaim 8 or9.

26. A method for treating a human having or being identified at risk of developingHelicobacter pyloriinfections, said method comprising orally administering an effective amount of a culture of viable microorganisms in an expression system, wherein said microorganisms or organisms are generally recognized as safe (GRAS) and genetically modified to express an adhesion protein according toclaim 1.

27. The composition according toclaim 4, wherein the molecular weight of said BabA adhesin protein is in the interval of 73 to 75 kDa.

28. The composition according toclaim 4, wherein the molecular weight of said BabA adhesin protein is about 73.5 kDa.

29. The antibody according toclaim 6, wherein the molecular weight of said BabA adhesin protein is in the interval of 73 to 75 kDa.

30. The antibody according toclaim 4, wherein the molecular weight of said BabA adhesin protein is about 73.5 KDa.

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