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US20050112694A1 - Antibodies that bind interleukin-4 receptor - Google Patents

Antibodies that bind interleukin-4 receptor
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US20050112694A1
US20050112694A1US10/982,359US98235904AUS2005112694A1US 20050112694 A1US20050112694 A1US 20050112694A1US 98235904 AUS98235904 AUS 98235904AUS 2005112694 A1US2005112694 A1US 2005112694A1
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sequence
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Paul Carter
Hongxing Zhou
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Immunex Corp
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Immunex Corp
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Abstract

The present invention relates to antibodies that bind to the IL-4 receptor, fragments, muteins, and derivatives of such antibodies, nucleic acids encoding such antibodies, fragments, muteins and derivatives, and methods of making and using such antibodies, fragments, muteins, derivatives and nucleic acids. Methods for treating medical conditions induced by interleukin-4 involve administering an IL-4 receptor binding antibody, or an IL-4 receptor binding fragment, mutein, or derivative of an IL-4 receptor binding antibody, to a patient afflicted with such a condition. Particular antibodies provided herein include human monoclonal antibodies. Certain of the antibodies inhibit both IL-4-induced and IL-13-induced biological activities.

Description

Claims (47)

1. An isolated antibody, comprising either
a) a light chain variable domain comprising an amino acid sequence selected from the group consisting of:
i) a sequence at least 80% identical to a sequence selected from the group consisting of SEQ ID NO:4, 6, 8, 10, 12, and 14,
ii) a sequence of at least 15 contiguous amino acids of a sequence selected from the group consisting of SEQ ID NO:4, 6, 8, 10, 12, and 14,
iii) a sequence that is encoded by a nucleotide sequence that is at least 80% identical to a nucleotide sequence selected from the group consisting of SEQ ID NO:3, 5, 7, 9, 11, and 13, and
iv) a sequence that is encoded by a nucleotide sequence that hybridizes under moderately stringent conditions to the complement of a nucleotide sequence selected from the group consisting of SEQ ID NO:3, 5, 7, 9, 11, and 13, or
b) a heavy chain variable domain comprising an amino acid sequence selected from the group consisting of:
i) a sequence at least 80% identical to a sequence selected from the group consisting of SEQ ID NO:16, 18, 20, 22, 24, 26, 28, 30, 32, 34, 36, 38, 40, 42, 44, 46, 48, 50, 52, 54, 56, 58, 60, and 62,
ii) a sequence of at least 15 contiguous amino acids of a sequence selected from the group consisting of SEQ ID NO:16, 18, 20, 22, 24, 26, 28, 30, 32, 34, 36, 38, 40, 42, 44, 46, 48, 50, 52, 54, 56, 58, 60, and 62,
iii) a sequence that is encoded by a nucleotide sequence that is at least 80% identical to a nucleotide sequence selected from the group consisting of SEQ ID NO:15, 17, 19, 21, 23, 25, 27, 29, 31, 33, 35, 37, 39, 41, 43, 45, 47, 49, 51, 53, 55, 57, 59,and 61, and
iv) a sequence that is encoded by a nucleotide sequence that hybridizes under moderately stringent conditions to the complement of a nucleotide sequence selected from the group consisting of SEQ ID NO:15, 17, 19, 21, 23, 25, 27, 29, 31, 33, 35, 37, 39, 41, 43, 45, 47, 49, 51, 53, 55, 57, 59, and 61, or
c) said light chain variable domain of a) and said heavy chain variable domain of b), with the proviso that said antibody does not comprise both the light chain variable domain amino acid sequence of SEQ ID NO:4, SEQ ID NO:63, SEQ ID NO:65, SEQ ID NO:67, or SEQ ID NO:69, and the heavy chain variable domain amino acid sequence of SEQ ID NO:16, SEQ ID NO:64, SEQ ID NO:66, or SEQ ID NO:68,
and wherein said antibody binds to the human IL-4 receptor.
2. The antibody ofclaim 1, comprising either
a) a light chain variable domain comprising an amino acid sequence selected from the group consisting of:
i) a sequence at least 85% identical to a sequence selected from the group consisting of SEQ ID NO:4, 6, 8, 10, 12, and 14,
ii) a sequence of at least 25 contiguous amino acids of a sequence selected from the group consisting of SEQ ID NO:4, 6, 8, 10, 12, and 14,
iii) a sequence that is encoded by a nucleotide sequence that is at least 85% identical to a nucleotide sequence selected from the group consisting of SEQ ID NO:3, 5, 7, 9, 11, and 13, and
iv) a sequence that is encoded by a nucleotide sequence that hybridizes under stringent conditions to the complement of a nucleotide sequence selected from the group consisting of SEQ ID NO:3, 5, 7, 9, 11, and 13, or
b) a heavy chain variable domain comprising an amino acid sequence selected from the group consisting of:
i) a sequence at least 85% identical to a sequence selected from the group consisting of SEQ ID NO:16, 18, 20, 22, 24, 26, 28, 30, 32, 34, 36, 38, 40, 42, 44, 46, 48, 50, 52, 54, 56, 58, 60, and 62,
ii) a sequence of at least 25 contiguous amino acids of a sequence selected from the group consisting of SEQ ID NO:16, 18, 20, 22, 24, 26, 28, 30, 32, 34, 36, 38, 40, 42, 44, 46, 48, 50, 52, 54, 56, 58, 60, and 62,
iii) a sequence that is encoded by a nucleotide sequence that is at least 85% identical to a nucleotide sequence selected from the group consisting of SEQ ID NO:15, 17, 19, 21, 23, 25, 27, 29, 31, 33, 35, 37, 39, 41, 43, 45, 47, 49, 51, 53, 55, 57, 59, and 61, and
iv) a sequence that is encoded by a nucleotide sequence that hybridizes under stringent conditions to the complement of a nucleotide sequence selected from the group consisting of SEQ ID NO:15, 17, 19, 21, 23, 25, 27, 29, 31, 33, 35, 37, 39, 41, 43, 45, 47, 49, 51, 53, 55, 57, 59, and 61, or
c) said light chain variable domain of a) and said heavy chain variable domain of b).
3. The antibody ofclaim 2, comprising either
a) a light chain variable domain comprising an amino acid sequence selected from the group consisting of:
i) a sequence at least 90% identical to a sequence selected from the group consisting of SEQ ID NO:4, 6, 8, 10, 12, and 14,
ii) a sequence of at least 35 contiguous amino acids of a sequence selected from the group consisting of SEQ ID NO:4, 6, 8, 10, 12, and 14, and
iii) a sequence that is encoded by a nucleotide sequence that is at least 90% identical to a nucleotide sequence selected from the group consisting of SEQ ID NO:3, 5, 7, 9, 11, and 13, or
b) a heavy chain variable domain comprising an amino acid sequence selected from the group consisting of:
i) a sequence at least 90% identical to a sequence selected from the group consisting of SEQ ID NO:16, 18, 20, 22, 24, 26, 28, 30, 32, 34, 36, 38, 40, 42, 44, 46, 48, 50, 52, 54, 56, 58, 60, and 62,
ii) a sequence of at least 35 contiguous amino acids of a sequence selected from the group consisting of SEQ ID NO:16, 18, 20, 22, 24, 26, 28, 30, 32, 34, 36, 38, 40, 42, 44, 46, 48, 50, 52, 54, 56, 58, 60, and 62, and
iii) a sequence that is encoded by a nucleotide sequence that is at least 90% identical to a nucleotide sequence selected from the group consisting of SEQ ID NO:15, 17, 19, 21, 23, 25, 27, 29, 31, 33, 35, 37, 39, 41, 43, 45, 47, 49, 51, 53, 55, 57, 59,and 61, or
c) said light chain variable domain of a) and said heavy chain variable domain of b).
4. The antibody ofclaim 3, comprising either
a) a light chain variable domain comprising an amino acid sequence selected from the group consisting of:
i) a sequence at least 95% identical to a sequence selected from the group consisting of SEQ ID NO:4, 6, 8, 10, 12, and 14,
ii) a sequence of at least 50 contiguous amino acids of a sequence selected from the group consisting of SEQ ID NO:4, 6, 8, 10, 12, and 14, and
iii) a sequence that is encoded by a nucleotide sequence that is at least 95% identical to a nucleotide sequence selected from the group consisting of SEQ ID NO:3, 5, 7, 9, 11, and 13, or
b) a heavy chain variable domain comprising an amino acid sequence selected from the group consisting of:
i) a sequence at least 95% identical to a sequence selected from the group consisting of SEQ ID NO:16, 18, 20, 22, 24, 26, 28, 30, 32, 34, 36, 38, 40, 42, 44, 46, 48, 50, 52, 54, 56, 58, 60, and 62,
ii) a sequence of at least 50 contiguous amino acids of a sequence selected from the group consisting of SEQ ID NO:16, 18, 20, 22, 24, 26, 28, 30, 32, 34, 36, 38, 40, 42, 44, 46, 48, 50, 52, 54, 56, 58, 60, and 62, and
iii) a sequence that is encoded by a nucleotide sequence that is at least 95% identical to a nucleotide sequence selected from the group consisting of SEQ ID NO:15, 17, 19, 21, 23, 25, 27, 29, 31, 33, 35, 37, 39, 41, 43, 45, 47, 49, 51, 53, 55, 57, 59, and 61, or
c) said light chain variable domain of a) and said heavy chain variable domain of b).
5. The antibody ofclaim 4, comprising either
a) a light chain variable domain comprising an amino acid sequence selected from the group consisting of:
i) a sequence at least 97% identical to a sequence selected from the group consisting of SEQ ID NO:4, 6, 8, 10, 12, and 14,
ii) a sequence of at least 70 contiguous amino acids of a sequence selected from the group consisting of SEQ ID NO:4, 6, 8, 10, 12, and 14, and
iii) a sequence that is encoded by a nucleotide sequence that is at least 97% identical to a nucleotide sequence selected from the group consisting of SEQ ID NO:3, 5, 7, 9, 11, and 13, or
b) a heavy chain variable domain comprising an amino acid sequence selected from the group consisting of:
i) a sequence at least 97% identical to a sequence selected from the group consisting of SEQ ID NO:16, 18, 20, 22, 24, 26, 28, 30, 32, 34, 36, 38, 40, 42, 44, 46, 48, 50, 52, 54, 56, 58, 60, and 62,
ii) a sequence of at least 70 contiguous amino acids of a sequence selected from the group consisting of SEQ ID NO:16, 18, 20, 22, 24, 26, 28, 30, 32, 34, 36, 38, 40, 42, 44, 46, 48, 50, 52, 54, 56, 58, 60, and 62, and
iii) a sequence that is encoded by a nucleotide sequence that is at least 97% identical to a nucleotide sequence selected from the group consisting of SEQ ID NO:15, 17, 19, 21, 23, 25, 27, 29, 31, 33, 35, 37, 39, 41, 43, 45, 47, 49, 51, 53, 55, 57, 59, and 61, or
c) said light chain variable domain of a) and said heavy chain variable domain of b).
6. The antibody ofclaim 5, comprising either
a) a light chain variable domain comprising an amino acid sequence selected from the group consisting of:
i) a sequence at least 99% identical to a sequence selected from the group consisting of SEQ ID NO:4, 6, 8, 10, 12, and 14,
ii) a sequence of at least 90 contiguous amino acids of a sequence selected from the group consisting of SEQ ID NO:4, 6, 8, 10, 12, and 14, and
iii) a sequence that is encoded by a nucleotide sequence that is at least 99% identical to a nucleotide sequence selected from the group consisting of SEQ ID NO:3, 5, 7, 9, 11, and 13, or
b) a heavy chain variable domain comprising an amino acid sequence selected from the group consisting of:
i) a sequence at least 99% identical to a sequence selected from the group consisting of SEQ ID NO:16, 18, 20, 22, 24, 26, 28, 30, 32, 34, 36, 38, 40, 42, 44, 46, 48, 50, 52, 54, 56, 58, 60, and 62,
ii) a sequence of at least 90 contiguous amino acids of a sequence selected from the group consisting of SEQ ID NO:16, 18, 20, 22, 24, 26, 28, 30, 32, 34, 36, 38, 40, 42, 44, 46, 48, 50, 52, 54, 56, 58, 60, and 62, and
iii) a sequence that is encoded by a nucleotide sequence that is at least 99% identical to a nucleotide sequence selected from the group consisting of SEQ ID NO:15, 17, 19, 21, 23, 25, 27, 29, 31, 33, 35, 37, 39, 41, 43, 45, 47, 49, 51, 53, 55, 57, 59,and 61, or
c) said light chain variable domain of a) and said heavy chain variable domain of b).
9. The antibody ofclaim 1 comprising either
a) a light chain variable domain comprising a sequence of amino acids that differs from SEQ ID NO:4 only by:
i) at least one amino acid substitution selected from the group consisting of S28T, S30N, S30G, S31N, S32D, S32N, A52T, S54Y, T57P, T57S, G93D, S94H, S94R, P96A, P97G, and T99M, and
ii) at least one amino acid substitution selected from the group consisting of E1D, L4M, S7T, G9A, K40R, F50Y, S68F, S77T, V86I, K105R, V106L, and E107D, or
b) a heavy chain variable domain comprising a sequence of amino acids that differs from SEQ ID NO:16 only by:
i) at least one amino acid substitution selected from the group consisting of N58S, Y101W, F102Y, D103T, D103N, D103P, Y104H, Y104N, Y104W, and Y104R, and
ii) at least one amino acid substitution selected from the group consisting of Q6E, H13Q, G24A, R86S, and M90T, or
c) the light chain variable domain of a) and the heavy chain variable domain of b).
10. The antibody ofclaim 1, wherein:
a. the light chain CDR1 comprises a sequence selected from the group consisting of residues 24-35 of SEQ ID NO:6, residues 24-35 of SEQ ID NO:8, residues 24-35 of SEQ ID NO:10, residues 24-35 of SEQ ID NO:12; and residues 24-35 of SEQ ID NO:14, or
b. the light chain CDR2 comprises a sequence selected from the group consisting of residues 51-57 of SEQ ID NO:4, residues 51-57 of SEQ ID NO:6, residues 51-57 of SEQ ID NO:10, and residues 51-57 of SEQ ID NO:12, or
c. the light chain CDR3 comprises a sequence selected from the group consisting of residues 90-99 of SEQ ID NO:4, residues 90-99 of SEQ ID NO:6, residues 90-99 of SEQ ID NO:8, and residues 90-99 of SEQ ID NO:14, or
d. the heavy chain CDR1 comprises the sequence residues 31-35 of SEQ ID NO:16, or
e. the heavy chain CDR2 comprises a sequence selected from the group consisting of residues 50-65 of SEQ ID NO:16, and residues 50-65 of SEQ ID NO:18, or
f. the heavy chain CDR3 comprises a sequence selected from the group consisting of residues 90-99 of SEQ ID NO:4, residues 98-104 of SEQ ID NO:18, residues 98-104 of SEQ ID NO:20, residues 98-104 of SEQ ID NO:22, residues 98-104 of SEQ ID NO:24, residues 98-104 of SEQ ID NO:26, residues 98-104 of SEQ ID NO:30, and residues 98-104 of SEQ ID NO:34.
11. The antibody ofclaim 10, wherein:
a. the light chain CDR1 comprises a sequence selected from the group consisting of residues 24-35 of SEQ ID NO:6, residues 24-35 of SEQ ID NO:8, residues 24-35 of SEQ ID NO:10, residues 24-35 of SEQ ID NO:12; and residues 24-35 of SEQ ID NO:14, and
b. the light chain CDR2 comprises a sequence selected from the group consisting of residues 51-57 of SEQ ID NO:4, residues 51-57 of SEQ ID NO:6, residues 51-57 of SEQ ID NO:10, and residues 51-57 of SEQ ID NO:12, and
c. the light chain CDR3 comprises a sequence selected from the group consisting of residues 90-99 of SEQ ID NO:4, residues 90-99 of SEQ ID NO:6, residues 90-99 of SEQ ID NO:8, and residues 90-99 of SEQ ID NO:14,
d. the heavy chain CDR1 comprises the sequence residues 31-35 of SEQ ID NO:16, and
e. the heavy chain CDR2 comprises a sequence selected from the group consisting of residues 50-65 of SEQ ID NO:16, and residues 50-65 of SEQ ID NO:18, and
f. the heavy chain CDR3 comprises a sequence selected from the group consisting of residues 90-99 of SEQ ID NO:4, residues 98-104 of SEQ ID NO:18, residues 98-104 of SEQ ID NO:20, residues 98-104 of SEQ ID NO:22, residues 98-104 of SEQ ID NO:24, residues 98-104 of SEQ ID NO:26, residues 98-104 of SEQ ID NO:30, and residues 98-104 of SEQ ID NO:34.
12. The antibody ofclaim 1 wherein:
a) the light chain FR1 comprises a sequence selected from the group consisting of residues 1-23 of SEQ ID NO:4, residues 1-23 of SEQ ID NO:10, residues 1-23 of SEQ ID NO:12, and residues 1-23 of SEQ ID NO:14, or
b) the light chain FR2 comprises a sequence selected from the group consisting of residues 36-50 of SEQ ID NO:4, and residues 36-50 of SEQ ID NO:14, or
c) the light chain FR3 comprises a sequence selected from the group consisting of residues 58-89 of SEQ ID NO:4, residues 58-89 of SEQ ID NO:10, and residues 58-89 of SEQ ID NO:12, or
d) the light chain FR4 comprises a sequence selected from the group consisting of residues 100-109 of SEQ ID NO:4, residues 100-109 of SEQ ID NO:8, and residues 100-109 of SEQ ID NO:12, or
e) the heavy chain FR1 comprises a sequence selected from the group consisting of residues 1-30 of SEQ ID NO:16, and residues 1-30 of SEQ ID NO:42, or
f) the heavy chain FR2 comprises the sequence of residues 36-49 of SEQ ID NO:16, or
g) the heavy chain FR3 comprises a sequence selected from the group consisting of residues 66-97 of SEQ ID NO:16, residues 66-97 of SEQ ID NO:18, and residues 66-97 of SEQ ID NO:42, or
h) the heavy chain FR4 comprises the sequence of residues 105-115 of SEQ ID NO:16.
13. The antibody ofclaim 12 wherein:
a) the light chain FR1 comprises a sequence selected from the group consisting of residues 1-23 of SEQ ID NO:4, residues 1-23 of SEQ ID NO:10, residues 1-23 of SEQ ID NO:12, and residues 1-23 of SEQ ID NO:14, and
b) the light chain FR2 comprises a sequence selected from the group consisting of residues 36-50 of SEQ ID NO:4, and residues 36-50 of SEQ ID NO:14, and
c) the light chain FR3 comprises a sequence selected from the group consisting of residues 58-89 of SEQ ID NO:4, residues 58-89 of SEQ ID NO:10, and residues 58-89 of SEQ ID NO:12, and
d) the light chain FR4 comprises a sequence selected from the group consisting of residues 100-109 of SEQ ID NO:4, residues 100-109 of SEQ ID NO:8, and residues 100-109 of SEQ ID NO:12, and
e) the heavy chain FR1 comprises a sequence selected from the group consisting of residues 1-30 of SEQ ID NO:16, and residues 1-30 of SEQ ID NO:42, and
f) the heavy chain FR2 comprises the sequence of residues 36-49 of SEQ ID NO:16, and
g) the heavy chain FR3 comprises a sequence selected from the group consisting of residues 66-97 of SEQ ID NO:16, residues 66-97 of SEQ ID NO:18, and residues 66-97 of SEQ ID NO:42, and
h) the heavy chain FR4 comprises the sequence of residues 105-115 of SEQ ID NO:16.
39. The method ofclaim 38 wherein said condition is asthma, septic arthritis, dermatitis herpetiformis, chronic idiopathic urticaria, ulcerative colitis, scleroderma, hypertrophic scarring, Whipple's Disease, benign prostate hyperplasia, a lung disorder in which IL-4 receptor plays a role, condition in which IL-4 receptor-mediated epithelial barrier disruption plays a role, a disorder of the digestive system in which IL-4 receptor plays a role, an allergic reaction to a medication, Kawasaki disease, sickle cell disease, Churg-Strauss syndrome, Grave's disease, pre-eclampsia, Sjogren's syndrome, autoimmune lymphoproliferative syndrome, autoimmune hemolytic anemia, Barrett's esophagus, autoimmune uveitis, tuberculosis, cyctic fibrosis, allergic bronchopulmonary mycosis, chronic obstructive pulmonary disease, bleomycin-induced pneumopathy and fibrosis, radiation-induced pulmonary fibrosis, pulmonary alveolar proteinosis, adult respiratory distress syndrome, sarcoidosis, hyper IgE syndrome, idiopathic hypereosinophil syndrome, an autoimmune blistering disease, pemphigus vulgaris, bullous pemphigoid, myasthenia gravis, chronic fatigue syndrome, or nephrosis.
43. The method ofclaim 42 wherein said condition is asthma, septic arthritis, dermatitis herpetiformis, chronic idiopathic urticaria, ulcerative colitis, scieroderma, hypertrophic scarring, Whipple's Disease, benign prostate hyperplasia, a lung disorder in which IL-4 receptor plays a role, condition in which IL-4 receptor-mediated epithelial barrier disruption plays a role, a disorder of the digestive system in which IL-4 receptor plays a role, an allergic reaction to a medication, Kawasaki disease, sickle cell disease, Churg-Strauss syndrome, Grave's disease, pre-eclampsia, Sjogren's syndrome, autoimmune lymphoproliferative syndrome, autoimmune hemolytic anemia, Barrett's esophagus, autoimmune uveitis, tuberculosis, cyctic fibrosis, allergic bronchopulmonary mycosis, chronic obstructive pulmonary disease, bleomycin-induced pneumopathy and fibrosis, radiation-induced pulmonary fibrosis, pulmonary alveolar proteinosis, adult respiratory distress syndrome, sarcoidosis, hyper IgE syndrome, idiopathic hypereosinophil syndrome, an autoimmune blistering disease, pemphigus vulgaris, bullous pemphigoid, myasthenia gravis, chronic fatigue syndrome, or nephrosis.
US10/982,3592003-11-072004-11-04Antibodies that bind interleukin-4 receptorAbandonedUS20050112694A1 (en)

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