The application is the part continuation application of the PCT application PCT/US2007/061183 of submission on January 27th, 2007, and the priority of therefore applying for by this PCT of 35 U.S.C. §, 120 requirements.The U.S. Provisional Application series number 60/746 that the application also submits to by 35 U.S.C. § 119 (e) requirements on Mays 5th, 2006,631, the U.S. Provisional Application series number of submitting on May 11st, 2,006 60/747,059, the U.S. Provisional Application series number of submitting on June 23rd, 2,006 60/805, the priority of the U.S. Provisional Application series number 60/864,554 that on November 6th, 660 and 2006 submitted to.The full content of each of these applications and all lists of references of wherein quoting all are attached to herein for any and all purpose integral body by reference.
The application submits to together with the sequence table of electronic format.Sequence table is to provide as the title of the 700Kb size of creating on May 7th, 2007 file for CORE0061WO12SEQ.TXT.Information in the sequence table of electronic format integral body by reference is attached to herein.
Summary of the invention
Disclosed herein is that short antisense compounds and the described chemical compound of use reduce the method that the target RNA in the cell or tissue is expressed.In certain embodiments, provided herein is the method that reduces the expression of the target in the animal, and described method comprises that the short antisense compounds with the nucleic acid of this target of targeting gives this animal.In some embodiment Shen, short antisense compounds is the oligonucleotide chemical compound.In certain embodiments, short antisense oligonucleotide length be about 8-16, preferably 9-15, more preferably 9-14, more preferably 10-14 nucleotide and comprise interval region (gapregion), the both sides of this interval region respectively are connected to pterion (wing), and wherein each pterion is made up of 1-3 nucleotide independently.Preferred die body (motif) includes but not limited to pterion-deoxidation interval-pterion die body of 3-10-3, the 2-10-3,2-10-2,1-10-1,2-8-2,1-8-1,3-6-3 or the 1-6-1 that are selected from.In a preferred embodiment, lack antisense oligonucleotide and comprise at least one high-affinity modification.In another embodiment, high-affinity is modified the high-affinity nucleotide that comprises through chemical modification.In a preferred embodiment, each pterion is made up of 1-3 the nucleotide of modifying through high-affinity independently.In one embodiment, the nucleotide of modifying through high-affinity is through sugar-modified nucleotide.
In certain embodiments, lacking antisense compounds, to demonstrate the uptake ratio of comparing in intestinal with the longer antisense compounds of length higher.Therefore, this paper also provides the method that reduces the target in the animal, and described method comprises orally give short antisense compounds of the present invention.
In certain embodiments, lack the proteinic nucleic acid that antisense compounds targeting coding is selected from ApoB, SGLT2, PCSK9, SOD1, CRP, GCCR, GCGR, DGAT2, PTP1B and PTEN.
Provide the method for the metabolic disease in the treatment animal in addition, described method comprises the animal that so short antisense compounds is needed this treatment, and this weak point antisense compounds targeting relates to the nucleic acid of regulating glucose metabolism or removing, lipid metabolism, cholesterol metabolism or insulin signaling transduction.
Also provide insulin sensitivity, the reduction blood-glucose that increases in the animal or reduce HbA1cMethod, described method comprises and gives described animal with so short antisense compounds that this weak point antisense compounds targeting coding relates to the nucleic acid of the target of regulating glucose metabolism or removing, lipid metabolism, cholesterol metabolism or insulin signaling transduction.
Provide the total serum cholesterol that reduces in the animal in addition, serum LDL, serum VLDL, serum hdl, serum triglycerides, the method of serum apolipoprotein (a) or free fatty, described method comprises and gives described animal with so short antisense compounds, this weak point antisense compounds targeting coding relates to regulates glucose metabolism or removing, lipid metabolism, the nucleic acid of the target of cholesterol metabolism or insulin signaling transduction, wherein said short antisense compounds length is 8-16 nucleotide and comprises interval region, the both sides of this interval region respectively are connected to the pterion, and wherein each pterion is made up of 1-3 the nucleotide of modifying through high-affinity independently.
Relate to some target of regulating glucose metabolism or removing, lipid metabolism, cholesterol metabolism or insulin signaling transduction and include but not limited to GCGR and ApoB-100.Therefore, provide the short antisense compounds and the method that reduces described target and/or the expression of target nucleic acids in animal of the nucleic acid of targeting coding GCGR and ApoB-100.In addition, the short antisense compounds that provides the nucleic acid of targeting coding GCGR and ApoB-100 is used for the treatment of the purposes of disease metabolic or cardiovascular or disease.
In certain embodiments, lack antisense compounds and also comprise conjugated group (conjugategroup).Conjugated group includes but not limited to C16And cholesterol.
In certain embodiments, lacking antisense compounds comprises and connects key (internucleoside linkage) or sugar moieties between at least one modified nuclear base, nucleoside.In certain embodiments, connecting key between this modified nucleoside is to connect key between thiophosphate (phosphorothioate) nucleoside.In certain embodiments, connecting key between each modified nucleoside is to connect key between the thiophosphate nucleoside.
In certain embodiments, lack antisense compounds and comprise at least one high-affinity modification.In some this embodiment, the high-affinity modification is the high-affinity nucleotide through chemical modification.In certain embodiments, the high-affinity nucleotide through chemical modification is through sugar-modified nucleotide.In certain embodiments, in sugar-modified nucleotide, have at least one between 4 ' and 2 ' position of sugar, to comprise abutment (bridge).Each independently is β-D or α-L sugar conformation through sugar-modified nucleotide.In certain embodiments, each described nucleotide of modifying through high-affinity is given every nucleotide Δ T of 1-4 degree (degree) at leastmIn certain embodiments, each describedly comprises 2 '-substituent group outside H or the OH through sugar-modified nucleotide.Thisly comprise that through sugar-modified nucleotide those have the nucleotide of the dicyclo sugar moieties of 4 '-2 ' bridge joint.In certain embodiments, each 2 '-substituent group independently is alkoxyl, substituted alkoxy or halogen.In certain embodiments, each 2 '-substituent group is OCH2CH2OCH3(2 '-MOE).
In certain embodiments, short antisense compounds have one or more between 4 ' and 2 ' position of sugar, comprise abutment through sugar-modified nucleotide, wherein each described abutment independently comprises 2-4 and independently is selected from-[C (R1) (R2)]n-,-C (R1)=C (R2)-,-C (R1)=N-,-C (=NR1)-,-C (=O)-,-C (=S)-,-O-,-Si (R1)2-,-S (=O)x-and-N (R1)-linking group;
Wherein
X is 0,1 or 2;
N is 1,2,3 or 4;
Each R1And R2Independent is H, protecting group, hydroxyl, C1-C12Alkyl, substituted C1-C12Alkyl, C2-C12Thiazolinyl, substituted C2-C12Thiazolinyl, C2-C12Alkynyl, substituted C2-C12Alkynyl, C5-C20Aryl, substituted C5-C20Aryl, heterocyclic radical, substituted heterocyclic radical, heteroaryl, substituted heteroaryl, C5-C7Alcyl, substituted C5-C7Alcyl, halogen, OJ1, NJ1J2, SJ1, N3, COOJ1, acyl group (C (=O)-H), substituted acyl group, CN, sulfonyl (S (=O)2-J1) or sulfinyl (S (=O)-J1); With
Each J1And J2Independent is H, C1-C12Alkyl, substituted C1-C12Alkyl, C2-C12Thiazolinyl, substituted C2-C12Thiazolinyl, C2-C12Alkynyl, substituted C2-C12Alkynyl, C5-C20Aryl, substituted C5-C20Aryl, acyl group (C (=O)-H), substituted acyl group, heterocyclic radical, substituted heterocyclic radical, C1-C12Aminoalkyl, substituted C1-C12Aminoalkyl or protecting group.
In one aspect, each described abutment independently is-[C (R1) (R2)]n-,-[C (R1) (R2)]n-O-,-C (R1R2)-N (R1)-O-or-C (R1R2)-O-N (R1)-.In yet another aspect, each described abutment independently is 4 '-(CH2)3-2 ', 4 '-(CH2)2-2 ', 4 '-CH2-O-2 ', 4 '-(CH2)2-O-2 ', 4 '-CH2-O-N (R1)-2 ' and 4 '-CH2-N (R1)-O-2 '-, each R wherein1Independent is H, protecting group or C1-C12Alkyl.
In certain embodiments, this paper provides and can be used for reducing the target relevant with the morbid state in the animal and/or the short antisense compounds of target RNA.In certain embodiments, provide short antisense compounds in order to the expression that reduces the target RNA in the animal.In certain embodiments, this paper provides short antisense compounds preparing in order to the purposes in the medicine of the metabolic disease in the treatment animal.In certain embodiments, this paper provides short antisense compounds preparing in order to increase insulin sensitivity, the reduction blood-glucose in the animal or to reduce HbA1cMedicine in purposes.Also providing short antisense compounds is preparing in order to the purposes in the medicine that reduces total serum cholesterol, serum LDL, serum VLDL, serum hdl, serum triglycerides, serum apolipoprotein (a) or free fatty in the animal.
In certain embodiments, short antisense compounds provided herein is compared with the longer parent antisense oligonucleotide of 20 nucleotide of length at least, strikes in target RNA to subtract to show the usefulness that equates or improve aspect (knockdown).In certain embodiments, lacking antisense compounds compares with the parent antisense oligonucleotide and demonstrates onset faster (target RNA minimizing).In certain embodiments, the usefulness of raising is in kidney.In certain embodiments, target RNA is mainly expressed in kidney.In certain embodiments, the usefulness of raising is in liver.In certain embodiments, target RNA is mainly expressed in kidney.
Detailed Description Of The Invention
It should be understood that above summary of the invention and detailed Description Of The Invention hereinafter all only are exemplary and indicative, do not limit the present invention of institute's prescription.The singular noun of using in this article comprises plural implication, unless clearly indicate really not so." or (perhaps) " that this paper uses mean " and/or ", unless otherwise prescribed.In addition, used term " comprises ", " comprising " be nonrestrictive.Equally, key element and the component that comprises a unit (unit) both contained in term such as " key element (element) " or " component (component) ", also contain and comprise key element and the component that surpasses a subunit (subunit), unless clearly indicate really not so.
Chapter title used herein only for the purpose of style of writing tissue, can not be interpreted as limiting described theme.The All Files that refers among the application or the each several part of file include but not limited to patent, patent application, article, books and paper, all for any purpose by reference clearly integral body be attached to herein.U.S. Patent Application Serial 10/712,795 and 10/200,710 for any purpose by reference clearly integral body be attached to herein.
A. definition
Unless provide specific definition, otherwise used analytical chemistry described herein, synthetic organic chemistry and medical science and pharmaceutical chemical term and these chemical method and the technology of relating to is term and method and technology known in this field and commonly used.Standard techniques can be used for chemosynthesis, the experimenter is prepared and send and treated to chemical analysis, at medication preparation.Some this technology and method can for example find in the following document: " Carbohydrate Modifications inAntisense Research " Sangvi and Cook (editor), American ChemicalSociety, Washington D.C., 1994; With " Remington ' s PharmaceuticalSciences, " Mack Publishing Co., Easton, Pa., 18th edition, 1990, these documents are that any purpose is attached to herein by reference.Under situation about allowing, present disclosure is all patents, patent application, disclosed application and other publications of indication and GenBank and other data bases' sequence in the whole text, and all integral body is attached to herein by reference.
Following term has following implication, unless otherwise:
Term used herein " nucleoside " means the glycosylamine that comprises nuclear base and sugar.Nucleoside includes but not limited to natural nucleus glycoside, dealkalize base (abasic) nucleoside, modified nucleoside and has mimic base and/or the nucleoside of glycosyl group.
Term used herein " nucleotide " refers to comprise the nuclear base and sugar reaches and the glycosylamine of the bound phosphate groups that sugar is covalently bound.Nucleotide can be with multiple substituent any modification.
Term used herein " nuclear base " refers to the base portion of nucleoside or nucleotide.The nuclear base can comprise any hydrogen-bonded atom or atomic group can take place with the base of another nucleic acid.
Term used herein " heterocyclic base moiety " refers to comprise heterocyclic nuclear base.
Term used herein " deoxyribonucleotide " means the nucleotide that has hydrogen in 2 ' position of the sugar moieties of nucleotide.Deoxyribonucleotide can be with multiple substituent any modification.
Term used herein " ribonucleotide " means the nucleotide that has hydroxyl in 2 ' position of the sugar moieties of nucleotide.Ribonucleotide can be with multiple substituent any modification.
Term used herein " oligomeric compounds " refer to comprise two or more substructures (sub-structure) and can with the poly structure of certain area hybridization of nucleic acid molecules.In certain embodiments, oligomeric compounds is an oligonucleoside.In certain embodiments, oligomeric compounds is an oligonucleotide.In certain embodiments, oligomeric compounds is an antisense compounds.In certain embodiments, oligomeric compounds is an antisense oligonucleotide.In certain embodiments, oligomeric compounds is short antisense compounds.In certain embodiments, oligomeric compounds is short antisense oligonucleotide.In certain embodiments, oligomeric compounds is a chimeric oligonucleotide.
Term used herein " monomer " refers to the single unit of oligomer.Monomer includes but not limited to nucleoside and nucleotide, no matter is natural or modified.
" oligonucleoside " used herein wherein connects the oligonucleotide that key does not contain phosphorus atoms between nucleoside.
Term used herein " oligonucleotide " refers to comprise the oligomeric compounds of a plurality of nucleotide that link together.In certain embodiments, the one or more nucleotide in the oligonucleotide are modified.In certain embodiments, oligonucleotide comprises ribonucleic acid (RNA) or DNA (deoxyribonucleic acid) (DNA).In certain embodiments, oligonucleotide is made up of natural and/or non-natural nuclear base, sugar and covalency internucleotide linkage (internucleotide linkage), and also can comprise non-nucleic acid conjugate (conjugate).
" internucleotide linkage " used herein refers to that the covalency between the adjacent nucleotide connects key.
Term used herein " Dan Julian key " refers to that two covalency between the monomer connect key.The Dan Julian key includes but not limited to connect key between internucleotide linkage and nucleoside.
" connecting key between natural nucleotide " used herein refers to that 3 '-5 ' di-phosphate ester connects key.
Term used herein " antisense compounds " refers to the target nucleic acids molecule of hybridizing with it complementary oligomeric compounds to the small part.In certain embodiments, antisense compounds can be regulated the expression of (improve or reduce) target nucleic acids.Antisense compounds includes but not limited to following chemical compound: the chimeric combination of oligonucleotide, oligonucleoside, oligonucleotide analogs, oligonucleotide mimetic and these chemical compounds (chimeric combination).Therefore, though all antisense compounds all are oligomeric compounds, not every oligomeric compounds all is an antisense compounds.
Term used herein " antisense oligonucleotide " refers to belong to the antisense compounds of oligonucleotide.
Term used herein " parent antisense oligonucleotide " refers to have the oligonucleotide deoxidation interval region, 20 nucleotide of length, this deoxidation interval region has 10 2 '-deoxyribonucleotides, both sides respectively are connected to first and second pterions, each pterion has 52 '-O-(2-methoxy ethyl) ribonucleotides (5-10-5MOE gapmer), and this oligonucleotide comprises the sequence of corresponding short antisense compounds as parent.
Term used herein " short antisense compounds " refers to about 8,9,10,11,12,13,14,15 or 16 the monomeric antisense compounds of length.In certain embodiments, lack antisense compounds and have at least one high-affinity modification.
Term used herein " short antisense oligonucleotide " refers to the antisense oligonucleotide of about 8,9,10,11,12,13,14,15 or 16 nucleotide of length.In certain embodiments, lack antisense oligonucleotide and have at least one high-affinity modification.
Term used herein " short gapmer " refers to so short antisense oligonucleotide, and it has length is 2-14 the interval region of examining base for first and second pterions of 1-3 nucleotide and length independently separately.
Term used herein " die body " refers to the pattern (pattern) of not modified and modified nucleotide in the short antisense compounds.
Term used herein " chimeric antisense oligomers " refers to such antisense oligomeric compounds, connect between its at least one sugar, nuclear base or nucleoside the suffered modification of key with its in the middle of at least one other sugar, nuclear base or nucleoside between connect key and compare variant.Connecting key between remaining sugar, nuclear base and nucleoside can be modified or do not modified independently, identical or different.
Term used herein " chimeric antisense oligonucleotide " refers to such antisense oligonucleotide, connect between its at least one sugar, nuclear base or nucleoside the suffered modification of key with its in the middle of at least one other sugar, nuclear base or nucleoside between connect key and compare variant.Connecting key between remaining sugar, nuclear base and nucleoside can be modified or do not modified independently, identical or different.
Term used herein " mixed matrix antisense oligonucleotide " refers to such antisense oligonucleotide, has wherein that to connect at least one other internucleotide linkage of key and its between at least one nucleoside different.
Term used herein " target " refers to the protein that need regulate.
Term used herein " target gene " refer to the to encode gene of target.
Term used herein " target nucleic acids " and the nucleic acid molecules of target " coding " refer to its expression or the active any nucleic acid molecules that can regulate by antisense compounds.Target nucleic acids includes but not limited to from the RNA (including but not limited to pre-mRNA and mRNA or their part) that transcribes of DNA of coding target, and spreads out from the cDNA of this RNA and miRNA.For example, target nucleic acids can be that it expresses the cytogene relevant with specific disease or the morbid state mRNA of this genetic transcription (or from), perhaps from the nucleic acid molecules of infectious agent.
Term used herein " targeting " refers to the association in the specific nucleotide zone in the middle of antisense compounds and particular target nucleic acid molecules or the target nucleic acids molecule.
Term used herein " 5 ' target site " refer in the target nucleic acids with the complementary nucleotide of 5 ' of specific antisense compounds-least significant end (most) nucleotide.
Term used herein " 3 ' target site " refer in the target nucleic acids with the complementary nucleotide of 3 ' of specific antisense compounds-least significant end (most) nucleotide.
Term used herein " target zone (target region) " refer in the target molecules with the complementary part of one or more antisense compounds.
Term used herein " target section (target segment) " refers to the more fraction or the inferior part in certain zone in the middle of the target nucleic acids.
Term used herein " nuclear base complement " refers to and can examine the nuclear base that base is carried out base pairing with another.For example, in DNA, adenine (A) and thymus pyrimidine (T) complementation.For example, in RNA, adenine (A) and uracil (U) complementation.In certain embodiments, complementary nuclear base refers to the nuclear base that can carry out base pairing with the nuclear base of its target nucleic acids in the antisense compounds.For example, if the nuclear base of certain position of antisense compounds can with the nuclear base generation hydrogen bonding of certain position of target nucleic acids, think that then the hydrogen-bonded position between this oligonucleotide and this target nucleic acids is complementary for this nuclear base pair.
Term used herein " incomplementarity nuclear base " refers to a pair of like this nuclear base, and they can not form hydrogen bond mutually or otherwise support hybridization.
Term used herein " complementation " refers to that oligomeric compounds is by examining the ability of base complement and another oligomeric compounds or nucleic acid hybridization.In certain embodiments, can stablize associating nuclear base between antisense compounds and the target thereof when occupied when relevant position that antisense compounds and its target have sufficient amount separately in the molecule is made by bonding mutually, antisense compounds and target thereof are just complementary mutually.Those of skill in the art will recognize that to comprise and do not eliminate the mispairing that oligomeric compounds keeps the ability of association state, this is possible.Therefore, antisense compounds described herein can comprise about 20% mispairing nucleotide (promptly not being and the complementary nuclear base of the corresponding nucleotide of target) at most.Preferably, antisense compounds contain be no more than about 15%, more preferably no more than about 10%, be most preferably not exceeding 5% mispairing or do not contain mispairing.Remaining nucleotide is complementary nuclear base, otherwise is exactly the nuclear base (for example universal base) that can not destroy hybridization.Those of ordinary skills will appreciate that, chemical compound that this paper provided and target nucleic acids 80%, at least 85%, at least 90%, at least 95%, at least 96%, at least 97%, at least 98%, at least 99% or 100% complementation.
Term used herein " mispairing " refers to the incomplementarity nuclear base in the middle of the complementary oligomeric compounds.
" hybridization " used herein means the pairing of complementary oligomeric compounds (for example antisense compounds and its target nucleic acids).Though do not want to be confined to concrete mechanism, prevailing pairing mechanism relates to the hydrogen bonding between complementary nucleoside base or the nucleotide base (nuclear base), and it can be Watson-Crick, Hoogsteen or trans Hoogsteen hydrogen bonding.For example, natural bases adenine is and natural nucleus base thymidine and the complementary nuclear base of uracil that they match by forming hydrogen bond.Natural base guanine is and natural base cytosine and the complementary nuclear base of 5-methylcytosine.Hybridization can occur under different situations.
This ability of the affinity that the affinity that term used herein " specific hybrid " refers to oligomeric compounds and the hybridization of nucleic acid site is hybridized greater than its and another nucleic acid site.In certain embodiments, antisense oligonucleotide and target locus specificity hybridization above one.
" design " used herein, " being designed to " refer to design can with the process of the oligomeric compounds of selected nucleic acid molecules specific hybrid.
Term used herein " adjusting " refers to compare with regulating preceding function or active level, and disturbance (perturbation) has taken place for function or activity.For example, regulate the variation comprise gene expression, this variation can be to improve (stimulate or induce) or reduce (suppress or reduce).As further example, the adjusting of expression comprises selects in addition disturbance to the splice site of pre-mRNA processing.
Term used herein " expression " refers to that all convert the encoding information of gene to the function and the step of the structure that exists and operate according to this in cell.This structure includes but not limited to the product transcribing and translate.
" variant " used herein refers to can be from the alternative rna transcription thing of identical DNA genome area generation.Variant includes but not limited to " pre-mRNA variant ", and this transcript and other transcript differences that produce from identical genomic DNA are their initial or final position, and this transcript contains intron sequences and exon sequence.Variant also includes but not limited to have alternately splice junction or alternately those variants of initial sum termination codon.
" through the monomer of high-affinity modification " used herein refers to such monomer, it is compared with natural monomer to have between at least one modified nuclear base, nucleoside and connects key or sugar moieties, and the result should modify to improve and comprise through the monomeric antisense compounds of high-affinity modification and the affinity of its target nucleic acids.High-affinity is modified the monomer (for example nucleoside and nucleotide) that includes but not limited to comprise through the sugar of 2 '-modification.
Term used herein " through 2 '-modify " or " 2 '-replace " mean the substituent sugar that comprises in 2 ' position outside H or the OH.Monomer through 2 '-modification includes but not limited to have such as 2 ' following-substituent BNA and monomer (for example nucleoside and nucleotide): pi-allyl, amino, azido, thio group, O-pi-allyl, O-C1-C10Alkyl ,-OCF3, O-(CH2)2-O-CH3, 2 '-O (CH2)2SCH3, O-(CH2)2-O-N (Rm) (Rn) or O-CH2-C (=O)-N (Rm) (Rn), each R whereinmAnd RnIndependent is H or substituted or unsubstituted C1-C10Alkyl.In certain embodiments, lacking antisense compounds comprises and does not have formula 2 '-O (CH2)n2 ' of H-modification monomer, wherein n is 1-6.In certain embodiments, lacking antisense compounds comprises and does not have formula 2 '-OCH32 '-modify monomer.In certain embodiments, lacking antisense compounds comprises and does not have formula 2 '-O (CH2)2OCH32 '-modify monomer.
Term used herein " dicyclo nucleic acid " or " BNA " or " bicyclic nucleoside " or " dicyclic ring thuja acid " refer to such nucleoside or nucleotide, wherein the furanose of nucleoside partly comprises the abutment that connects two carbon atoms on the furanose ring, thereby forms the dicyclo ring system.
Term used herein " methylene oxygen base BNA " refers to β-D-methylene oxygen base BNA alone, unless otherwise.
Term used herein " MOE " refers to 2 '-methoxy ethyl substituent group.
Term used herein " gapmer " refers to so chimeric oligomeric compounds, the zone (" pterion ") that it comprises middle section (" (gap) at interval ") and is positioned at the middle section both sides, wherein this comprises at least one modification different with the modification in each pterion at interval.This modification comprises that nuclear base modification, Dan Julian key (monomeric linkage) are modified and is sugar-modified and do not have a modification (not modified).Therefore, in certain embodiments, the nucleotide in each pterion connects key and nucleotide at interval, and to connect key different.In certain embodiments, each pterion comprises the nucleotide that has through the high-affinity modification, then comprises at interval not have this modified nucleotide.In certain embodiments, the nucleotide in and the nucleotide in the pterion all comprise the high-affinity modification at interval, but the modification of the high-affinity is at interval modified different with the high-affinity in the pterion.In certain embodiments, the modification in the pterion is identical mutually.In certain embodiments, the modification in the pterion is different mutually.In certain embodiments, the nucleotide in is not modified at interval, and the nucleotide in the pterion is modified.In certain embodiments, the modification in each pterion is identical.In certain embodiments, the modification in pterion is different with the modification in another pterion.In certain embodiments, lacking antisense compounds is the gapmer that has 2 '-deoxyribonucleotide and have the nucleotide of modifying through high-affinity in the interval in the pterion.
Term used herein " prodrug " refers to such therapeutic agent, and it prepares with inactive form, and the effect by endogenous enzymes or other chemical substances and/or condition in the middle of health or its cell changes into activity form (being medicine).
Term used herein " the acceptable salt of medicine " refers to the salt of reactive compound, and this salt can keep the required biological activity of reactive compound, does not give unwanted toxicology effect to reactive compound again.
Term used herein " cap " or " distal end cap part " refer to the chemical modification that the arbitrary end at antisense compounds mixes.
Term used herein " prevention " refers to the outbreak of disease or disease or development postponed or stops several hrs to several days, time of preferred several thoughtful some months.
Term used herein " improvement " refers to alleviate at least one indication (indicator) of disease or severity of disease.The seriousness indication can be measured by well known to a person skilled in the art subjectivity or objective measurement approach.
Term used herein " treatment " is showed and is given change or the improvement that compositions of the present invention realizes disease or disease.Prevention, improvement and/or treatment may require termly or give multidose before disease or disease outbreak, to change the process of disease or disease.In addition, single medicament can be used for single individuality, with sequential ground or side by side carry out each prevention, improvement and the treatment of disease or disease.
Term used herein " medicament " refers to can provide the material of curative effect when giving the experimenter.
Term used herein " treatment effective dose " refers to provide the amount of the medicament of curative effect to animal.
" giving " used herein refers to medicament is offered animal, includes but not limited to give to give with the oneself by the medical professional.
Term used herein " gives " to refer to give animal with two or more medicaments altogether.These two or more medicaments can be in single pharmaceutical composition, perhaps can be respectively in independent pharmaceutical composition.Each of these two or more medicaments can give by the identical or different approach that gives.Contain parallel giving or sequential giving altogether.
Term used herein " pharmaceutical composition " refers to be suitable for giving the mixture of each individual material.For example, pharmaceutical composition can comprise antisense oligonucleotide and aseptic aqueous solution.
Term used herein " individuality " refers to selected people or the non-human animal who treats and participate in therapy.
Term used herein " animal " refers to people or non-human animal, includes but not limited to mice, rat, rabbit, Canis familiaris L., cat, pig and non-human primate, includes but not limited to monkey and chimpanzee.
Term used herein " experimenter " refers to be given the animal of pharmaceutical composition, includes but not limited to the people.
Term used herein " persistent period " refers to the period that activity or incident continue.In certain embodiments, the treatment persistent period is the period that gives each dosage of medicament.
Term used herein " parenteral gives " refers to give by injection or infusion.Parenteral includes but not limited to subcutaneously give, intravenous gives or or intramuscular give.
Make a comment or criticism gives below skin term used herein " subcutaneous giving "." intravenous gives " means and is administered in the vein.
Term " dosage " used herein (dose) " specified amount of the medicament that refers in single gives to be provided.In certain embodiments, dosage can or repeatedly be injected agent (bolus), tablet or injection and gives with twice.For example, need in the subcutaneous embodiment that gives at some, the desired volume of required dosage is not easy to supply by single injection.In this embodiment, can adopt twice or multiple injection reaches required dosage.In certain embodiments, dosage can give with twice or multiple injection, so that the injection site reaction in the individuality minimizes.
Term " dosage " unit used herein (dosage unit) " refer to provide according to this form of medicament.In certain embodiments, dosage unit is the bottle (vial) that comprises freeze dried antisense oligonucleotide.In certain embodiments, dosage unit is the bottle that comprises (reconstituted) antisense oligonucleotide of redissolution.
Term used herein " medicament " refers to can provide the material of curative effect when giving individuality.For example, in certain embodiments, antisense oligonucleotide is a medicament.
Term used herein " active pharmaceutical ingredient " refers to the material that required effect can be provided in the pharmaceutical composition.
Term used herein " treatment effective dose " refers to provide the amount of the medicament of curative effect to individuality.In certain embodiments, the treatment effective dose of antisense compounds is to need to give the amount that is produced observable effects.
Term used herein " hypercholesterolemia " refers to the serum cholesterol rising to be the disease of feature.
Term used herein " hyperlipemia " refers to the serum lipids rising to be the disease of feature.
Term used herein " hypertriglyceridemia " refers to the triglyceride levels rising to be the disease of feature.
Term used herein " non-familial hypercholesterolemia " refers to that not to be that the result's of single genetic gene mutation cholesterol raises be the disease of feature.
Term used herein " polygenes hypercholesterolemia " refers to that it is the disease of feature that the cholesterol that causes with the influence by multiple inherited genetic factors raises.In certain embodiments, the polygenes hypercholesterolemia can be by the meals of lipid picked-up aggravation.
Term used herein " familial hypercholesterolemia (FH) " refers to LDL-receptor (LDL-R) gene mutation, LDL-C significantly raises and atherosclerosis outbreak too early is the autosomal dominant metabolic disease of feature.When individuality meets one of following standard or make a definite diagnosis the generation familial hypercholesterolemia when multinomial: genetic test is confirmed the LDL-acceptor gene of 2 sudden changes; Genetic test is confirmed the LDL-acceptor gene of 1 sudden change; Medical history record has the LDL-cholesterol of the untreated 500mg/dL of surpassing; Xanthoma tendinosum and/or xanthomata cutis took place before 10 years old; Perhaps parents have the record that the serum LDL-cholesterol before the lipid consistent with the heterozygous familial hypercholesterolemia reduces therapy raises.
Term used herein " familial hypercholesterolemia isozygotys " or " HoFH " refer to have with father and mother both sides' LDL-R gene the disease of the feature of sporting.
Term used herein " heterozygous familial hypercholesterolemia " or " HeFH " refer to that the LDL-R gene with father and mother one side has the disease of the feature of sporting.
It is the disease of feature that term used herein " Combination dyslipidemia " refers to raise with serum cholesterol rising and serum triglycerides.
It is the disease of feature that term used herein " diabetic dyslipidemia " or " type ii diabetes companion dyslipidemia " refer to increase with type ii diabetes, HDL-C minimizing, serum triglycerides rising and small and dense LDL granule.
What term used herein " CHD risk equipotential outbreak (risk equivalent) " referred to clinical atheromatosis brings high risk indication to coronary heart disease.For example, in certain embodiments, the outbreak of CHD risk equipotential includes but not limited to the aneurysm of clinical crown cardiopathia, symptom type carotid disease, peripheral arterial disease and/or abdominal aorta.
Term used herein " non-alcoholic fatty liver disease (NAFLD) " refers to that the liver fat inflammation not cause because of abuse of alcohol (for example alcohol consumption was above 20g/ days) is the disease of feature.In certain embodiments, NAFLD is relevant with insulin resistance and metabolism syndrome.
Term used herein " non-alcoholic stellato-hepatitis (NASH) " refers to that with the inflammation that does not cause because of alcohol abuse in the liver and fat and fibrosis tissue accumulation be the disease of feature.
NASH is the extreme form of NAFLD.
Term used herein " major risk factors " refers to facilitate the high risk factor of specified disease or disease.In certain embodiments, the major risk factors of coronary heart disease includes but not limited to smoking, hypertension, low HDL-C, familial history of coronary artery disease and age.
Term used herein " CHD risk factor " refers to outbreak of CHD risk equipotential and major risk factors.
Term used herein " coronary heart disease (CHD) " show heart blood supply and oxygen supply little blood vessel narrow this atherosclerotic often result.
Term used herein " coronary heart disease risk attenuating " refers to an attenuating of knowing from experience the probability of development coronary heart disease.In certain embodiments, the attenuating of coronary heart disease risk is that improvement (for example reduction of LDL-C level) by one or more CHD risk factor is measured.
Term used herein " atherosclerosis " refers to existing for of fatty deposits arteriosclerosis feature, that influence large artery trunks and medium-sized artery.Fatty deposits is called " tremulous pulse medicated porridge sample tumor (atheroma) " or " speckle (plaque) ", and it mainly is made up of cholesterol and other fat, calcium and scar tissue, can damage the tremulous pulse lining.
Term used herein " coronary disease medical history " refers to tangible clinically coronary heart disease, and a situation arises in individuality or individual family member's medical history.
Term used herein " coronary heart disease of early showing effect " refers to make a definite diagnosis coronary heart disease before 50 years old.
Term used herein " inhibin does not tolerate individuality " refers to such individuality, and creatine kinase increases because the inhibin therapy can experience for he, the liver function test is unusual, in myalgia or the central nervous system's side effect one or multinomial.
Term used herein " effect " refers to produce the ability of required effect.For example, lipid reduces the attenuating that the effect of therapy can be in LDL-C, VLDL-C, IDL-C, non-HDL-C, ApoB, lipoprotein (a) or the triglyceride or multinomial concentration.
" acceptable security feature (safety profile) refers to the side effect pattern in the middle of clinical acceptable limit to term used herein.
Term used herein " side effect " refers to the physiological reaction outside the effect that be attributable to treat, required.In certain embodiments, side effect includes but not limited to that the test of injection site reaction, liver function is unusual, renal dysfunction, hepatotoxicity, Toxicity of Kidney, the central nervous system is unusual and myopathy.For example, the raising of transamination enzyme level can be represented hepatotoxicity or abnormal liver function in the serum.For example, the bilirubin raising can be represented hepatotoxicity or abnormal liver function.
Term used herein " injection site reaction " refers to the chafing of individual injection site or rubescent unusually.
Term used herein " individual compliance " refer to individual to recommend or the adhering to of specified therapy.
Term used herein " lipid reduction therapy " refers to offer individual to reduce the therapeutic scheme of one or more lipids in the individuality.In certain embodiments, provide lipid to reduce therapy to reduce among ApoB in the individuality, T-CHOL, LDL-C, VLDL-C, IDL-C, non-HDL-C, triglyceride, small and dense LDL granule and the Lp (a) one or more.
Term used herein " lipid reduction medicament " refers to offer individual medicament with the reduction that realizes the lipid in the individuality.For example, in certain embodiments, lipid is reduced medicament offer individual to reduce in ApoB, LDL-C, T-CHOL and the triglyceride one or more.
Term used herein " LDL-C target " refers to that lipid reduces needed LDL-C level after the therapy.
Term used herein " is comply with " and is referred to that individuality adheres to the therapy of being recommended.
Term used herein " therapy of being recommended " refers to that the medical professional recommends to treat, improvement or prophylactic therapeutic scheme.
Term used herein " low LDL-receptor active " refers to the enough not high LDL-receptor active that must keep the clinically acceptable level of LDL-C in blood flow.
Term used herein " cardiovascular consequence " refers to the appearance of great disadvantageous cardiovascular event.
Term used herein " improved cardiovascular consequence " refers to the minimizing of the appearance of great disadvantageous cardiovascular event or its risk.The example of great disadvantageous cardiovascular event includes but not limited to death, re-infarction, apoplexy, cardiogenic shock, pulmonary edema, asystole and atrial arrhythmia.
Term used herein " surrogate markers of cardiovascular consequence " refers to the indirect indication of cardiovascular event or its risk.For example, the surrogate markers of cardiovascular consequence comprises carotid intimal medial thickness (CIMT).Another example of the surrogate markers of cardiovascular consequence comprises tremulous pulse medicated porridge sample tumor size.The big I of tremulous pulse medicated porridge sample tumor is measured by intravascular ultrasound (IVUS).
Term used herein " HDL-C raising " refers to Serum HDL-C raising in time in the individuality.
Term used herein " lipid reduction " refers to one or more serum lipids reduction in time in the individuality.
Term used herein " metabolic disease " refers to that with the change of metabolic function or disturbance be the disease of feature." metabolic " and " metabolism " is term well known in the art, generally comprises the whole biochemical process that occurs in the middle of the live organism.Metabolic disease includes but not limited to hyperglycemia, prediabetes, diabetes (I type and II type), obesity, insulin resistance and metabolism syndrome.
Term used herein " metabolism syndrome " refers to metabolic lipid of originating from of a monoid and non-lipid cardiovascular risk factors.It and vague generalization (generalized) metabolic disease that is called insulin resistance are closely linked.U.s. national cholesterol education program (National Cholesterol Education Program, NCEP) (Adult Treatment Panel III ATPIII) has set up the standard of diagnosing metabolism syndrome when having three or more to exist in five risk determiners to adult treatment expert scheme III.These five risk determiners are, with the abdominal obesity of waistline definition, the man is greater than 102cm, and the woman is greater than 88cm; Triglyceride levels is more than or equal to 150mg/dL; The HDL cholesterol levels, the man is less than 40mg/dL, and the woman is less than 50mg/dL; Blood pressure is more than or equal to 130/85mm Hg; With the fasting glucose level more than or equal to 110mg/dL.These determiners in clinical practice, can measure easily (JAMA, 2001,285:2486-2497).
Term used herein " alkyl " refers to contain the saturated straight chain or the branched-chain hydrocarbons group of maximum 24 carbon atoms.The example of alkyl group includes but not limited to methyl, ethyl, propyl group, butyl, isopropyl, n-hexyl, octyl group, decyl, dodecyl etc.Alkyl group generally includes 1 to about 24 carbon atoms, and more generally 1 to about 12 carbon atom (C1-C12Alkyl), more preferably 1 to about 6 carbon atoms.Term used herein " low alkyl group " comprises 1 to about 6 carbon atoms.Alkyl group used herein can be chosen wantonly and comprise one or more other substituent groups.
Saturated straight chain or side chain hydrocarbon chain group that term used herein " thiazolinyl " refers to contain maximum 24 carbon atoms and has at least one carbon-to-carbon double bond.The example of alkenyl group includes but not limited to vinyl, acrylic, cyclobutenyl, 1-methyl-2-butene-1-base, diene such as 1,3-butadiene etc.Alkenyl group generally includes 2 to about 24 carbon atoms, and more generally 2 to about 12 carbon atoms, and more preferably 2 to about 6 carbon atoms.Alkenyl group used herein can be chosen wantonly and comprise one or more other substituent groups.
Saturated straight chain or branched-chain hydrocarbons group that term used herein " alkynyl " refers to contain maximum 24 carbon atoms and has at least one carbon-to-carbon triple bond.The example of alkynyl includes but not limited to acetenyl, 1-propinyl, ethyl acetylene base etc.Alkynyl group generally includes 2 to about 24 carbon atoms, and more generally 2 to about 12 carbon atoms, and more preferably 2 to about 6 carbon atoms.Alkynyl group used herein can be chosen wantonly and comprise one or more other substituent groups.
Term used herein " aminoalkyl " refers to the amino alkyl group that replaces.This term mean be included in any position have amino substituent group and wherein alkyl group connect the C of key by amino group and parent molecule1-C12Alkyl group.The moieties of aminoalkyl groups and/or amino part can further be substituted base and replace.
Term used herein " aliphatic series " refers to contain maximum 24 carbon atoms, wherein the saturation between any two carbon atoms is singly-bound, two key or triple-linked straight or branched hydrocarbyl group.Aliphatic group preferably includes 1 to about 24 carbon atoms, and more generally 1 to about 12 carbon atoms, and more preferably 1 to about 6 carbon atoms.The straight or branched of aliphatic group can be interrupted by one or more hetero atoms of nitrogen, oxygen, sulfur and phosphorus that comprise.This aliphatic group that is interrupted by hetero atom includes but not limited to poly-alkoxyl (as the polyoxygenated alkylene), polyamine and poly-imines.Aliphatic group used herein can be chosen wantonly and comprise other substituent group.
Term " alicyclic ring " or " alcyl " refer to that ring wherein belongs to aliphatic ring system.This ring system can comprise one or more rings, and wherein at least one ring is aliphatic.Preferred alicyclic ring comprises wherein having about 5 rings to about 9 carbon atoms.Alicyclic ring used herein can be chosen wantonly and comprise other substituent group.
Term used herein " alkoxyl " refers to the group that forms between alkyl group and oxygen atom, wherein this oxygen atom is in order to be connected alkoxy base with parent molecule.The example of alkoxyl includes but not limited to methoxyl group, ethyoxyl, propoxyl group, isopropoxy, n-butoxy, sec-butoxy, tert-butoxy, n-pentyloxy, neopentyl oxygen, positive hexyloxy etc.Alkoxy base used herein can be chosen wantonly and comprise other substituent group.
Term used herein " halogen " and " halogen " refer to be selected from the atom of fluorine, chlorine, bromine and iodine.
Term used herein " aryl " and " aromatics " refer to have the monocycle or the multi-ring carbon-loop system group of one or more aromatic rings.The example of aromatic yl group includes but not limited to phenyl, naphthyl, tetralyl, indanyl, indenyl (idenyl) etc.The preferred aryl groups ring system has about 5 to about 20 carbon atoms in one or more rings.Aromatic yl group used herein can be chosen wantonly and comprise other substituent group.
Term used herein " aralkyl " and " aryl alkyl " refer to the group that forms between alkyl group and aromatic yl group, wherein alkyl group is in order to be connected aromatic alkyl group with parent molecule.Example includes but not limited to benzyl, phenethyl etc.Aromatic alkyl group used herein can be chosen wantonly and comprise the other substituent group that is connected with alkyl group, aromatic yl group or this two groups of constituting described group.
Term used herein " heterocyclic group " refers to such basic (radical) monocycle or polycyclic aromatic ring system, and it comprises at least one hetero atom and be undersaturated, fractional saturation or fully saturated, thereby comprises heteroaryl groups.Heterocyclic group also means and comprises such condensed ring system, and wherein one or more condensed ring contain at least one hetero atom, and other ring can contain one or more hetero atoms or the optional hetero atom that do not contain.Heterocyclic group generally includes at least one atom that is selected from sulfur, nitrogen or oxygen.The example of heterocyclic group comprises [1,3] dioxolanes, pyrrolidinyl, pyrazolinyl, pyrazolidinyl, imidazolinyl, imidazolidinyl, piperidyl, piperazinyl, oxazolidinyl, isoxazole alkyl, morpholinyl, thiazolidinyl, isothiazole alkyl, quinoxalinyl, pyridazine ketone group, tetrahydrofuran base etc.Heterocyclic group used herein can be chosen wantonly and comprise other substituent group.
Term used herein " heteroaryl " and " heteroaromatic " refer to comprise the group of monocycle or multi-ring aromatic ring ring system or condensed ring system, wherein at least one ring be aromatics and comprise one or more hetero atoms.Heteroaryl also means and comprises the condensed ring system, comprises that wherein one or more condensed ring do not contain heteroatomic system.Heteroaryl groups generally includes an annular atoms that is selected from sulfur, nitrogen or oxygen.The example of heteroaryl groups includes but not limited to pyridine radicals, pyrazinyl, pyrimidine radicals, pyrrole radicals, pyrazolyl, imidazole radicals, thiazolyl, oxazolyl, isoxazolyl, thiadiazolyl group, oxadiazole base, thienyl (thiophenyl), furyl, quinolyl, isoquinolyl, benzimidazolyl, benzoxazolyl, quinoxalinyl etc.Heteroaryl groups can be directly or is connected with parent molecule by coupling part such as aliphatic group or hetero atom.Heteroaryl groups used herein can be chosen wantonly and comprise other substituent group.
" heteroaryl alkyl " used herein refers to have the heteroaryl groups that the front defines of alkyl group, and this alkyl group can be connected the heteroaryl alkyl group with parent molecule.Example includes but not limited to pyridylmethyl, pyrimidinylethyl, naphthyridinyl propyl group etc.Heteroaryl alkyl group used herein can be chosen in heteroaryl moieties or moieties one or comprise other substituent group on two simultaneously wantonly.
Term used herein " monocycle or multiring structure " comprises all monocycles or polycyclic ring system, wherein multi-ring have a ring that condenses or link together, and this term means and comprises the monocycle that is selected from aliphatic group, alicyclic group, aryl, heteroaryl, aralkyl, aryl alkyl, heterocyclic group, heteroaryl, heteroaromatic group, heteroaryl alkyl separately and mix ring system.This monocycle or multiring structure can contain the ring that the same ring or degree of saturation have nothing in common with each other, and comprise saturated fully, fractional saturation or fully unsaturated.Each ring can comprise the ring of annular atoms to produce heterocycle and only to comprise the C annular atoms that is selected from C, N, O and S, this can exist in the mixing die body (mixied motif) of for example benzimidazole, one of them ring only has carboatomic ring atom, and condensed ring then has two nitrogen-atoms.Monocycle or multiring structure can further be substituted base and replace, phthalimide for example, and it has two=O group and is connected with one of them ring.In yet another aspect, monocycle or multiring structure can directly pass through annular atoms, be connected with parent molecule by substituent group or difunctional coupling part.
Term used herein " acyl group " refers to that organic acid removes the formed group of hydroxyl, and it has general formula-C (O)-X, wherein X normally aliphatic series, alicyclic or aromatics.Example comprises aliphatic carbonyl, aromatics carbonyl, aliphatic sulfonyl, aromatics sulfinyl, aliphatic sulfinyl, aromatics phosphoryl (aromatic phosphate), aliphatic phosphoryl (aliphatic phosphate) etc.Carboxyl groups used herein can be chosen wantonly and comprise other substituent group.
Term " alkyl " comprises the group that comprises C, O and H.Comprise straight chain group, branched group and cyclic group with any degree of saturation.This hydrocarbyl group can comprise the hetero atom of one or more N of being selected from, O and S, and can be further by the single replacement of one or more substituent groups or polysubstituted.
Term used herein " substituent group " comprises and is added to other groups or parent compound usually to strengthen required characteristic or to produce the group of required effect.Substituent group can be protected or not protected, and of can be added in the parent compound can add angle of striking or a plurality of angle of striking that adds.Substituent group also can further be replaced by other substituent groups, and can directly or by the linking group such as alkyl group or hydrocarbyl group be connected with parent compound.This substituent group includes but not limited to halogen, hydroxyl, alkyl, thiazolinyl, alkynyl, acyl group (C (O) RAa), carboxyl (C (O) O-RAa), aliphatic group, alicyclic group, alkoxyl, substituted oxo base (O-RAa), aryl, aralkyl, heterocyclic radical, heteroaryl, heteroaryl alkyl, amino (NRBbRCc), imino group (=NRBb), amide groups (C (O) NRBbRCcOr-N (RBb) C (O) RAa), azido (N3), nitro (NO2), cyano group (CN), carbamoyl (OC (O) NRBbRCcOr-N (RBb) C (O)-ORAa), urea groups (N (RBb) C (O) NRBbRCc), ghiourea group (N (RBb) C (S) NRBbRCc), guanidine radicals (N (RBb) C (=NRBb) NRBbRCc), amidino groups (C (=NRBb) NRBbRCcOr-N (RBb) C (NRBb) RAa), mercaptan (SRBb), sulfinyl (S (O) RBb), sulfonyl (S (O)2RBb), sulfoamido (S (O)2NRBbRCcOr-N (RBb) S (O)2RBb) and conjugated group.Each R whereinAa, RBbAnd RCcIndependent is H, the optional chemical functional group who connects or other substituent group, and preferred list includes but not limited to H, alkyl, thiazolinyl, alkynyl, aliphatic group, alkoxyl, acyl group, aryl, aralkyl, heteroaryl, alicyclic group, heterocyclic group and heteroaryl alkyl.
B. some oligomeric compounds
In certain embodiments, than natural oligomer such as DNA or RNA, need carry out chemical modification to oligomeric compounds.Some this modification can change the activity of oligomeric compounds.Some this chemical modification can for example change activity in the following manner: improve the affinity of antisense compounds to its target nucleic acids, improve it to the resistance of one or more nucleases and/or the pharmacokinetics or the tissue distribution of change oligomeric compounds.In some cases, adopt chemical method to improve the affinity of oligomeric compounds, can make and to use short oligomeric compounds its target.
1. some monomer
In certain embodiments, oligomeric compounds comprises one or more modified monomers.In certain embodiments, oligomeric compounds comprises one or more high-affinity monomers.In certain embodiments, this high-affinity monomer is selected from the monomer (for example nucleoside and nucleotide) that comprises through the sugar of 2 '-modification, includes but not limited to have such as 2 ' following-substituent BNA and monomer (for example nucleoside and nucleotide): pi-allyl, amino, azido, thio group, O-pi-allyl, O-C1-C10Alkyl ,-OCF3, O-(CH2)2-O-CH3, 2 '-O (CH2)2SCH3, O-(CH2)2-O-N (Rm) (Rn) or O-CH2-C (=O)-N (Rm) (Rn), each R whereinmAnd RnIndependent is H or substituted or unsubstituted C1-C10Alkyl.
In certain embodiments, include but not limited to that short antisense compounds comprises one or more high-affinity monomers at interior oligomeric compounds of the present invention, condition is that this oligomeric compounds does not include and comprises 2 '-O (CH2)nThe nucleotide of H, wherein n is 1-6.
In certain embodiments, include but not limited to that short antisense compounds comprises one or more high-affinity monomers at interior oligomeric compounds of the present invention, condition is that this oligomeric compounds does not include and comprises 2 '-OCH3Or 2 '-O (CH2)2OCH3Nucleotide.
In certain embodiments, include but not limited to that short antisense compounds comprises one or more high-affinity monomers at interior oligomeric compounds of the present invention, condition is that this oligomeric compounds does not include α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA.
In certain embodiments, include but not limited to that short antisense compounds comprises one or more high-affinity monomers at interior oligomeric compounds of the present invention, condition is that this oligomeric compounds does not include β-D-methylene oxygen base (4 '-CH2-O-2 ') BNA.
In certain embodiments, include but not limited to that short antisense compounds comprises one or more high-affinity monomers at interior oligomeric compounds of the present invention, condition is that this oligomeric compounds does not include α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA or β-D-methylene oxygen base (4 '-CH2-O-2 ') BNA.
A. some examines base
The trona base section of nucleoside is heterocyclic base normally.This heterocyclic base of prevailing two classes is purine and pyrimidine.For the nucleoside that comprises furan pentose, phosphate group can be connected with 2 ', 3 ' or 5 ' hydroxylic moiety of sugar.When forming oligonucleotide, these phosphate groups are together covalently bound mutually with adjacent nucleoside, form the linear polymerization chemical compound.In the middle of oligonucleotide, it is to form skeleton between the nucleotide of oligonucleotide that phosphate group is said to be usually.Natural even key or the skeleton of RNA and DNA are 3 '-5 ' phosphodiester bonds.
Except " not modified " or " natural " nuclear base such as purine are examined bases adenine (A) and guanine (G) and pyrimidine nuclear base thymus pyrimidine (T), cytosine (C) and uracil (U), well known to a person skilled in the art many modified nuclear bases or examine the base analogies also to be applicable to chemical compound described herein.In certain embodiments, modified nuclear base is structurally to examine the quite proximate nuclear base of base with parent, for example 7-deazapurine, 5-methylcytosine or G-pincers (G-clamp).In certain embodiments, nuclear base analogies comprise more complicated structure, for example three Huan phenoxazines nuclear base analogies.The method for preparing above-mentioned modified nuclear base is well known to a person skilled in the art.
B. some sugar
Oligomeric compounds provided herein can comprise one or more monomers with modified sugar moieties, comprises nucleoside or nucleotide.For example, the furanose ring of nucleoside can be modified in many ways, includes but not limited to add substituent group, and two non-geminal annular atoms bridge joints form dicyclo nucleic acid (BNA).
In certain embodiments, oligomeric compounds comprises one or more BNA monomers.In some this embodiment, BNA includes but not limited to (A) α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA, (B) β-D-methylene oxygen base (4 '-CH2-O-2 ') BNA, (C) ethyleneoxy group (4 '-(CH2)2-O-2 ') BNA, (D) amino oxygen base (4 '-CH2-O-N (R)-2 ') BNA and (E) oxygen base amino (4 '-CH2-N (R)-O-2 ') BNA, as shown in Figure 1.
Some BNA structure of Fig. 1
In certain embodiments, the BNA chemical compound includes but not limited to have the chemical compound of at least one abutment between 4 ' and 2 ' position of sugar, wherein each abutment independently comprise 1 or 2-4 independently be selected from-[C (R1) (R2)]n-,-C (R1)=C (R2)-,-C (R1)=N-,-C (=NR1)-,-C (=O)-,-C (=S)-,-O-,-Si (R1)2-,-S (=O)x-and-N (R1)-linking group;
Wherein:
X is 0,1 or 2;
N is 1,2,3 or 4;
Each R1And R2Independent is H, protecting group, hydroxyl, C1-C12Alkyl, substituted C1-C12Alkyl, C2-C12Thiazolinyl, substituted C2-C12Thiazolinyl, C2-C12Alkynyl, substituted C2-C12Alkynyl, C5-C20Aryl, substituted C5-C20Aryl, heterocyclic radical, substituted heterocyclic radical, heteroaryl, substituted heteroaryl, C5-C7Alcyl, substituted C5-C7Alcyl, halogen, OJ1, NJ1J2, SJ1, N3, COOJ1, acyl group (C (=O)-H), substituted acyl group, CN, sulfonyl (S (=O)2-J1) or sulfinyl (sulfoxyl) (S (=O)-J1); With
Each J1And J2Independent is H, C1-C12Alkyl, substituted C1-C12Alkyl, C2-C12Thiazolinyl, substituted C2-C12Thiazolinyl, C2-C12Alkynyl, substituted C2-C12Alkynyl, C5-C20Aryl, substituted C5-C20Aryl, acyl group (C (=O)-H), substituted acyl group, heterocyclic radical, substituted heterocyclic radical, C1-C12Aminoalkyl, substituted C1-C12Aminoalkyl or protecting group.
In one embodiment, each abutment of BNA chemical compound independently is-[C (R1) (R2)]n-,-[C (R1) (R2)]n-O-,-C (R1R2)-N (R1)-O-or-C (R1R2)-O-N (R1)-.In another embodiment, each described abutment independently is 4 '-CH2-2 ', 4 '-(CH2)2-2 ', 4 '-(CH2)3-2 ', 4 '-CH2-O-2 ', 4 '-(CH2)2-O-2 ', 4 '-CH2-O-N (R1)-2 ' and 4 '-CH2-N (R1)-O-2 '-, each R wherein1Independent is H, protecting group or C1-C12Alkyl.
Some BNA has been produced and open (Singh et al., Chem.Commun., 1998,4,455-456 in patent documentation and scientific literature; Koshkin et al., Tetrahedron, 1998,54,3607-3630; Wahlestedt et al., Proc.Natl.Acad.Sci.U.S.A., 2000,97,5633-5638; Kumar et al., Bioorg.Med.Chem.Lett., 1998,8,2219-2222; WO 94/14226; WO 2005/021570; Singh et al., J.Org.Chem., 1998,63,10035-10039.Disclose BNA authorize United States Patent (USP) and the example of published application comprise for example United States Patent (USP) 7,053,207; 6,268,490; 6,770,748; 6,794,499; 7,034,133 and 6,525,191; And the early stage publication number 2004-0171570 of the U.S.; 2004-0219565; 2004-0014959; 2003-0207841; 2004-0143114 and 20030082807.
This paper also provides such BNA, and wherein 2 ' of ribose ring-hydroxyl is connected with 4 ' carbon atom of sugar ring, thereby forms methylene oxygen base (4 '-CH2-O-2 ') Lian Jian, (summary is seen Elayadi et al., Curr.Opinion Invens.Drugs, 2001,2,558-561 to form the dicyclo sugar moieties; Braasch et al., Chem.Biol., 2001,8 1-7; With Orum et al., Curr.Opinion Mol.Ther., 2001,3,239-243; In addition referring to United States Patent (USP) 6,268,490 and 6,670,461).Connecting key can be the methylene (CH of bridge joint 2 ' oxygen atom and 4 ' carbon atom2-) group, so dicyclo is partly used term methylene oxygen base (4 '-CH2-O-2 ') BNA; As this position is the ethylidene group, then uses term ethyleneoxy group (4 '-CH2CH2-O-2 ') BNA (Singh et al., Chem.Commun., 1998,4,455-456:Morita et al., Bioorganic Medicinal Chemistry, 2003,11,2211-2226).Methylene (4 '-CH2-O-2 ') BNA and other dicyclo sugar analogues demonstrate very high with duplex heat stability complementary DNA and RNA (Tm=+3-+10 ℃), to the stability of the circumscribed degraded of 3 '-nucleic acid and good dissolution characteristics.Comprise BNA existing description of potent and nontoxic antisense oligonucleotide (Wahlestedt et al., Proc.Natl.Acad.Sci.U.S.A., 2000,97,5633-5638).
Methylene oxygen base (the 4 '-CH that had discussed2-O-2 ') BNA isomer is α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA has proved that it has splendid stability to 3 '-exonuclease.α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA be incorporated into and shown in active antisense gapmer of potent antisense and the chimera (Frieden et al., nucleic acid s Research, 2003,21,6365-6372).
Methylene oxygen base (4 '-CH2-O-2 ') existing (the Koshkin et al. that describes of the synthetic and preparation of BNA monomer adenine, cytosine, guanine, 5-methyl-cytosine, thymus pyrimidine and uracil and their oligomerization and nucleic acid recognizing characteristic, Tetrahedron, 1998,54,3607-3630).BNA and preparation thereof also have description in WO 98/39352 and WO 99/14226.
Methylene oxygen base (4 '-CH2-O-2 ') BNA analog thiophosphate-methylene oxygen base (4 '-CH2-O-2 ') BNA and 2 '-sulfo--BNA also be produced (Kumar et al., Bioorg.Med.Chem.Lett., 1998,8,2219-2222).The relevant preparation that comprises as the locking nucleoside analog of the oligodeoxyribonucleotide duplex of the substrate of nucleic acid polymerase, also existing describe (Wengel et al., WO 99/14226).In addition, this novel conformation limited (comformationally restricted) high-affinity oligonucleotide analogs of 2 '-amino-BNA synthetic also has description (Singh et al. in the art, J.Org.Chem., 1998,63,10035-10039).In addition, 2 '-amino-BNA and 2 '-methylamino-BNA has also obtained preparation, existing report before the heat stability of the duplex of they and complementary RNA chain and DNA chain.
Modified sugar moieties is known, can be used to change the affinity of (normally improving) antisense compounds and its target and/or improves the nuclease resistance.The representative list of preferred modified sugar includes but not limited to comprise methylene oxygen base (4 '-CH through the sugar (BNA) of dicyclo modification2-O-2 ') BNA and ethyleneoxy group (4 '-(CH2)2-O-2 ' abutment) BNA; Substituted sugar particularly has 2 '-F, 2 '-OCH3Or 2 '-O (CH2)2-OCH3Substituent 2 '-replacement sugar; Sugar with 4 '-thio-modification.Substituting of the also available sugar simulation of sugar group and so on.The method for preparing modified sugar is well known to a person skilled in the art.The patent and the prospectus of the preparation of this modified sugar of some representational instructions include but not limited to 4,981,957; 5,118,800; 5,319,080; 5,359,044; 5,393,878; 5,446,137; 5,466,786; 5,514,785; 5,519,134; 5,567,811; 5,576,427; 5,591,722; 5,597,909; 5,610,300; 5,627,053; 5,639,873; 5,646,265; 5,658,873; 5,670,633; 5,792,747; 5,700,920; 6,531,584; With 6,600,032; With WO 2005/121371.
In certain embodiments, BNA comprises the bicyclic nucleoside with following formula:
Wherein:
Bx is a heterocyclic base moiety;
T1Be H or hydroxyl protecting group;
T2Be H, hydroxyl protecting group or reactive phosphorus group;
Z is C1-C6Alkyl, C2-C6Thiazolinyl, C2-C6Alkynyl, substituted C1-C6Alkyl, substituted C2-C6Thiazolinyl, substituted C2-C6Alkynyl, acyl group, substituted acyl group or substituted amide.
In one embodiment, the independent quilt of each described substituent group independently is selected from the single replacement of following optional protected substituent group or polysubstituted: halogen, oxo base, hydroxyl, OJ1, NJ1J2, SJ1, N3, OC (=X) J1, OC (=X) NJ1J2, NJ3C (=X) NJ1J2And CN, wherein each J1, J2And J3Independent is H or C1-C6Alkyl, X are O, S or NJ1
In some this embodiment, the independent quilt of each described substituent group independently is selected from the single replacement of following substituent group or polysubstituted: halogen, oxo base, hydroxyl, OJ1, NJ1J2, SJ1, N3, OC (=X) J1And NJ3C (=X) NJ1J2, each J wherein1, J2And J3Independent is H, C1-C6Alkyl or substituted C1-C6Alkyl, X are O or NJ1
In certain embodiments, the Z group is by one or more XxThe C that replaces1-C6Alkyl, wherein each XxIndependent is OJ1, NJ1J2, SJ1, N3, OC (=X) J1, OC (=X) NJ1J2, NJ3C (=X) NJ1J2Or CN; Each J wherein1, J2And J3Independent is H or C1-C6Alkyl, X are O, S or NJ1In another embodiment, the Z group is by one or more XxThe C that replaces1-C6Alkyl, wherein each XxIndependent is halogen (for example fluorine), hydroxyl, alkoxyl (CH for example3O-), substituted alkoxyl or azido.
In certain embodiments, the Z group is-CH2Xx, X whereinxBe OJ1, NJ1J2, SJ1, N3, OC (=X) J1, OC (=X) NJ1J2, NJ3C (=X) NJ1J2Or CN; Each J wherein1, J2And J3Independent is H or C1-C6Alkyl, X are O, S or NJ1In another embodiment, the Z group is-CH2Xx, X whereinxBe halogen (for example fluorine), hydroxyl, alkoxyl (CH for example3O-) or azido.
In some this embodiment, the Z group is (R)-configuration:
In some this embodiment, the Z group is (S)-configuration:
In certain embodiments, each T1And T2Be hydroxyl protecting group.The preferred list of hydroxyl protecting group comprises benzyl, benzoyl, 2,6-dichloro benzyl, t-butyldimethylsilyl, t-butyldiphenylsilyl, methanesulfonate, tosylate, dimethoxytrityl (DMT), 9-phenyl yanthine-9-base (Pixyl) and 9-(right-methoxyphenyl) xanthine-9-base (MOX).In certain embodiments, T1For being selected from the hydroxyl protecting group of acetyl group, benzyl, t-butyldimethylsilyl, t-butyldiphenylsilyl and dimethoxytrityl, wherein preferred hydroxyl protecting group is T1Be 4,4 '-dimethoxytrityl.
In certain embodiments, T2Be the reactive phosphorus group, wherein preferred reactive phosphorus group comprises diisopropyl hydroxyl-oxethyl phosphoramidite and H-phosphate radical.In certain embodiments, T1Be 4,4 '-dimethoxytrityl, T2Be diisopropyl hydroxyl-oxethyl phosphoramidite.
In certain embodiments, oligomeric compounds has the monomer of at least one following formula:
Or the monomer of following formula:
Or the monomer of following formula:
Wherein
Bx is a heterocyclic base moiety;
T3Be linking group, nucleotide, oligonucleoside, oligonucleotide, single poly-subunit or oligomeric compounds between H, hydroxyl protecting group, the connection conjugated group that is connected with nucleoside or nucleoside;
T4Be linking group, nucleotide, oligonucleoside, the poly-subunit of oligonucleotide list or oligomeric compounds between H, hydroxyl protecting group, the connection conjugated group that is connected with nucleoside or nucleoside;
T wherein3And T4In linking group, nucleotide, oligonucleoside, oligonucleotide, single poly-subunit or oligomeric compounds between at least one is with nucleoside is connected nucleoside; With
Z is C1-C6Alkyl, C2-C6Thiazolinyl, C2-C6Alkynyl, substituted C1-C6Alkyl, substituted C2-C6Thiazolinyl, substituted C2-C6Alkynyl, acyl group, substituted acyl group or substituted amide.
In one embodiment, the independent quilt of each described substituent group independently is selected from the single replacement of following optional protected substituent group or polysubstituted: halogen, oxo base, hydroxyl, OJ1, NJ1J2, SJ1, N3, OC (=X) J1, OC (=X) NJ1J2, NJ3C (=X) NJ1J2And CN, wherein each J1, J2And J3Independent is H or C1-C6Alkyl, X are O, S or NJ1
In one embodiment, the independent quilt of each described substituent group independently is selected from the single replacement of following substituent group or polysubstituted: halogen, oxo base, hydroxyl, OJ1, NJ1J2, SJ1, N3, OC (=X) J1And NJ3C (=X) NJ1J2, each J wherein1, J2And J3Independent is H or C1-C6Alkyl, X are O or NJ1
In some this embodiment, at least one Z is C1-C6Alkyl or substituted C1-C6Alkyl.In certain embodiments, each Z independently is C1-C6Alkyl or substituted C1-C6Alkyl.In certain embodiments, at least one Z is C1-C6Alkyl.In certain embodiments, each Z independently is C1-C6Alkyl.In certain embodiments, at least one Z is a methyl.In certain embodiments, each Z is a methyl.In certain embodiments, at least one Z is an ethyl.In certain embodiments, each Z is an ethyl.In certain embodiments, at least one Z is substituted C1-C6Alkyl.In certain embodiments, each Z independently is substituted C1-C6Alkyl.In certain embodiments, at least one Z is substituted methyl.In certain embodiments, each Z is substituted methyl.In certain embodiments, at least one Z is substituted ethyl.In certain embodiments, each Z is substituted ethyl.
In certain embodiments, at least one substituent group is C1-C6(for example at least one Z is by one or more C to alkoxyl1-C6The C that alkoxyl replaces1-C6Alkyl).In another embodiment, each substituent group independently is C1-C6(for example each Z independently is by one or more C to alkoxyl1-C6The C that alkoxyl replaces1-C6Alkyl).
In certain embodiments, at least one C1-C6Alkoxy substituent is CH3(for example at least one Z is CH to O-3OCH2-).In another embodiment, each C1-C6Alkoxy substituent is CH3(for example each Z is CH to O-3OCH2-).
In certain embodiments, at least one substituent group is the halogen (C of at least one Z for being replaced by one or more halogens for example1-C6Alkyl).In certain embodiments, independently (for example each Z independently is the C that replaced by one or more halogens to each substituent group for halogen1-C6Alkyl).In certain embodiments, at least one halogenic substituent is that (for example at least one Z is CH to fluorine2FCH2-, CHF2CH2-or CF3CH2-).In certain embodiments, each halogenic substituent is that (for example each Z independently is CH to fluorine2FCH2-, CHF2CH2-or CF3CH2-).
In certain embodiments, at least one substituent group is the hydroxyl (C of at least one Z for being replaced by one or more hydroxyls for example1-C6Alkyl).In certain embodiments, independently (for example each Z independently is the C that replaced by one or more hydroxyls to each substituent group for hydroxyl1-C6Alkyl).In certain embodiments, at least one Z is HOCH2-.In another embodiment, each Z is HOCH2-.
In certain embodiments, at least one Z is CH3-, CH3CH2-, CH2OCH3-, CH2F-or HOCH2-.In certain embodiments, each Z independently is CH3-, CH3CH2-, CH2OCH3-, CH2F-or HOCH2-.
In certain embodiments, at least one Z group is by one or more XxThe C that replaces1-C6Alkyl, wherein each XxIndependent is OJ1, NJ1J2, SJ1, N3, OC (=X) J1, OC (=X) NJ1J2, NJ3C (=X) NJ1J2Or CN; Each J wherein1, J2And J3Independent is H or C1-C6Alkyl, X are O, S or NJ1In another embodiment, at least one Z group is by one or more XxThe C that replaces1-C6Alkyl, wherein each XxIndependent is halogen (for example fluorine), hydroxyl, alkoxyl (CH for example3O-) or azido.
In certain embodiments, each Z group independently is by one or more XxThe C that replaces1-C6Alkyl, wherein each XxIndependent is OJ1, NJ1J2, SJ1, N3, OC (=X) J1, OC (=X) NJ1J2, NJ3C (=X) NJ1J2Or CN; Each J wherein1, J2And J3Independent is H or C1-C6Alkyl, X are O, S or NJ1In another embodiment, each Z group independently is by one or more XxThe C that replaces1-C6Alkyl, wherein each XxIndependent is halogen (for example fluorine), hydroxyl, alkoxyl (CH for example3O-) or azido.
In certain embodiments, at least one Z group is-CH2Xx, X whereinxBe OJ1, NJ1J2, SJ1, N3, OC (=X) J1, OC (=X) NJ1J2, NJ3C (=X) NJ1J2Or CN; Each J wherein1, J2And J3Independent is H or C1-C6Alkyl, X are O, S or NJ1In certain embodiments, at least one Z group is-CH2Xx, X whereinxBe halogen (for example fluorine), hydroxyl, alkoxyl (CH for example3O-) or azido.
In certain embodiments, each Z group independently is-CH2Xx, each X whereinxIndependent is OJ1, NJ1J2, SJ1, N3, OC (=X) J1, OC (=X) NJ1J2, NJ3C (=X) NJ1J2Or CN; Each J wherein1, J2And J3Independent is H or C1-C6Alkyl, X are O, S or NJ1In another embodiment, each Z group independently is-CH2Xx, each X whereinxIndependent is halogen (for example fluorine), hydroxyl, alkoxyl (CH for example3O-) or azido.
In certain embodiments, at least one Z is CH3-.In another embodiment, each Z is CH3-.
In certain embodiments, at least one monomeric Z group is (the R)-configuration shown in the following formula:
Or (the R)-configuration shown in the following formula:
Or (the R)-configuration shown in the following formula:
In certain embodiments, the monomeric Z group of each of described formula is (R)-configuration.
In certain embodiments, at least one monomeric Z group is (the S)-configuration shown in the following formula:
Or (the S)-configuration shown in the following formula:
Or (the S)-configuration shown in the following formula:
In certain embodiments, the monomeric Z group of each of described formula is (S)-configuration.
In certain embodiments, T3Be H or hydroxyl protecting group.In certain embodiments, T4Be H or hydroxyl protecting group.In another embodiment, T3For with nucleoside that nucleoside, nucleotide or single poly-subunit are connected between connect gene.In certain embodiments, T4For with nucleoside that nucleoside, nucleotide or single poly-subunit are connected between linking group.In certain embodiments, T3For with nucleoside that oligonucleoside or oligonucleotide are connected between linking group.In certain embodiments, T4For with nucleoside that oligonucleoside or oligonucleotide are connected between linking group.In certain embodiments, T3For with nucleoside that oligomeric compounds is connected between linking group.In certain embodiments, T4For with nucleoside that oligomeric compounds is connected between linking group.In certain embodiments, T3And T4In at least one comprises linking group between the nucleoside that is selected from di-phosphate ester or thiophosphate.
In certain embodiments, oligomeric compounds has monomeric at least one zone of following formula of at least two adjacency:
Or monomeric at least one zone of the following formula of at least two adjacency:
Or monomeric at least one zone of the following formula of at least two adjacency:
In certain embodiments, oligomeric compounds comprises monomeric at least two zones of following formula of at least two adjacency.In certain embodiments, oligomeric compounds comprise interband every (gapped) oligomeric compounds.In certain embodiments, oligomeric compounds comprises about 8 to about 14 at least one zones in abutting connection with β-D-2 '-desoxyribofuranose yl nucleosides.In certain embodiments, oligomeric compounds comprises about 9 to about 12 at least one zones in abutting connection with β-D-2 '-desoxyribofuranose yl nucleosides.
In certain embodiments, monomer comprises sugared analogies.In some this embodiment, replace connecting key combination between sugar or sugar-nucleoside with analogies, keep the nuclear base with selected target hybridization.The representative example of sugar analogies includes but not limited to cyclohexenyl group or morpholino.The representative example that connects the analogies of key combination between sugar-nucleoside includes but not limited to that not having chirality by no electric charge connects peptide nucleic acid(PNA) (PNA) and the morpholino group that key connects.In some cases, replace the nuclear base with analogies.Representational nuclear base analogies are well known in the art, include but not limited to three Huan phenoxazine analog and universal base (28:2911-14 is attached to herein by reference for Berger et al., Nuc Acid Res.2000).The method of synthetic sugared analogies, nucleoside analogies and nuclear base analogies is well known to a person skilled in the art.
3. Dan Julian key
Described herein is with monomer (including but not limited to modified and not modified nucleoside and nucleotide) thereby the linking group of the formation oligomeric compounds that links together.According to whether having phosphorus atoms, linking group mainly is divided into two classes.The representational phosphorous key that connects includes but not limited to di-phosphate ester (P=O), phosphotriester, methyl phosphonate, phosphoramidate and thiophosphate (P=S).Representational non-phosphorous linking group includes but not limited to methylene methyl-imino (CH2-N (CH3)-O-CH2-), the sulfur diester (O-C (O)-S-), thionocarbamate (O-C (O) (NH)-S-), siloxanes (O-Si (H) 2-O-) and N, N '-dimethylformamide dimethyl hydrazine (CH2-N (CH3)-N (CH3)-).Oligomeric compounds with non-phosphorus linking group is called oligonucleoside.Connect key than natural phosphodiester, modified company's key can be used to change the nuclease resistance of (normally improving) oligomeric compounds.In certain embodiments, the Lian Jianke with chiral atom is prepared into racemic mixture, is prepared into independent enantiomer.Representational chirality connects key and includes but not limited to that phosphonate ester and thiophosphate prepare phosphorous even key and the non-phosphorous method that connects key is well known to a person skilled in the art.
Oligomeric compounds described herein contains one or more asymmetric centers, therefore produce enantiomer, diastereomer and other stereoisomerism configurations, determine with the absolute stereo chemistry, for for example sugared anomer is (R) or (S), and perhaps waiting for for example aminoacid is (D) or (L).Antisense compounds provided herein comprises all this possible isomers and their racemic form and the pure form of optically-active.
4. oligomeric compounds
In certain embodiments, this paper provides such oligomeric compounds, and it has to can be used for forming and comprises the reactive phosphorus group that for example connects company's key of key between di-phosphate ester and thiophosphate nucleoside.The method of the precursor of preparation and/or purification oligomeric compounds does not constitute the restriction to compositions provided herein and method.Synthetic and purification comprises that the method for the oligomeric compounds of DNA, RNA, oligonucleotide, oligonucleoside and antisense compounds is well known to a person skilled in the art.
In general, oligomeric compounds comprises a plurality of poly-subunits of list that linked together by linking group.The limiting examples of oligomeric compounds comprises primer, probe, antisense compounds, antisense oligonucleotide, external guide sequence (EGS) oligonucleotide, replaces montage (alternatesplicer) and siRNA.Thus, these chemical compounds can be introduced with the form of strand, two strands, annular, branch or hair clip, and can contain the structural detail such as inside or terminal process (bulge) or ring (loop).The oligomerization double chain compound can be that two chains that hybridization forms double chain compound take place, or has that enough self is complementary so that hybridization takes place and form the single chain of double chain compound wholly or in part.
In certain embodiments, the invention provides chimeric oligomeric compounds.In some this embodiment, chimeric oligomeric compounds is a chimeric oligonucleotide.In some this embodiment, chimeric oligonucleotide comprises the nucleotide through different modifying.In certain embodiments, chimeric oligonucleotide is the mixed matrix antisense oligonucleotide.
In general, chimeric oligomeric compounds can have so modified nucleoside, and they can be in position separately, perhaps can determine that clustering together in the zone of specific die body in meeting.Any combination of modifying and/or simulating group can constitute chimeric oligomeric compounds as herein described.
In certain embodiments, chimeric oligomeric compounds comprises at least one modified zone usually, and this modification can cause to the increase of the raising of the resistance of nuclease degradation, cellular uptake and/or to the raising of the binding affinity of target nucleic acids.In certain embodiments, the substrate of the enzyme that can cut RNA:DNA or RNA:RNA crossbred can be served as in the other zone of oligomeric compounds.For instance, this cell endonuclease of RNA enzyme H can cut the RNA chain of RNA:DNA duplex.Therefore, the activation of RNA enzyme H can cause the cutting of RNA target, thereby greatly strengthens the efficient to the inhibition of gene expression.Therefore, when using chimera, than for example with the thiophosphate deoxy-oligonucleotide of identical target area hybridization, also often can obtain suitable result with short oligomeric compounds.The available gel electrophoresis of the cutting of RNA target carries out conventional sense, if necessary, detects with relevant nucleic acid hybridization technique well known in the art.
In certain embodiments, chimeric oligomeric compounds is gapmer.In certain embodiments, chimeric chemical compound is short antisense compounds.In certain embodiments, lacking antisense compounds is gapmer.In some this embodiment, the mixed matrix antisense oligomers has one type internucleotide linkage in one or two pterion, have dissimilar internucleotide linkages at spacer.In some this embodiment, the mixed matrix antisense oligonucleotide has di-phosphate ester in the pterion and connects key, has thiophosphate at spacer and connects key.At some wherein in the embodiment different of the internucleotide linkage in certain pterion, that the internucleotide linkage of this pterion and spacer bridge joint is identical with internucleotide linkage in the pterion with the internucleotide linkage in the spacer.At some wherein in the embodiment different of the internucleotide linkage in certain pterion, that the internucleotide linkage of this pterion and spacer bridge joint is identical with internucleotide linkage in the spacer with the internucleotide linkage in the spacer.
C. some lacks antisense compounds
Disclosed herein is length 8-16, preferred 9-15, more preferably 9-14, the more preferably short antisense compounds of 10-14 nucleotide.In certain embodiments, the length of lacking antisense compounds is 9-14 nucleotide.In certain embodiments, the length of lacking antisense compounds is 10-14 nucleotide.In certain embodiments, this short antisense compounds is short antisense oligonucleotide.
In certain embodiments, lack antisense compounds and comprise one or more chemical modifications.In some this embodiment, short antisense compounds comprises at least one modified nucleotide.In certain embodiments, lack antisense compounds and comprise two or more at least modified nucleotide.In certain embodiments, lack antisense compounds and comprise at least one modified internucleotide linkage.In certain embodiments, lacking antisense compounds is the mixed matrix oligonucleotide.In certain embodiments, lacking antisense compounds is chimeric oligonucleotide.In certain embodiments, lack antisense oligonucleotide through evenly modifying.In certain embodiments, lacking antisense oligonucleotide comprises and independently is chosen in each nuclear base and connects the modification of key at each.
In certain embodiments, lacking antisense compounds is short gapmer.In some this embodiment, short gamper comprises at least one high-affinity and modifies in one or more pterions of chemical compound.In certain embodiments, lack antisense compounds and in each pterion, comprise 1-3 high-affinity modification.In certain embodiments, the high-affinity of lacking antisense compounds is modified and to be made the target affinity be similar to and even greater than the target affinity of longer antisense compounds.In certain embodiments, the nucleotide of modifying through high-affinity is through sugar-modified nucleotide.This nucleotide that comprises abutment between those 4 ' and 2 ' positions that comprises through sugar-modified nucleotide at sugar.Sugar-modified BNA and other 2 '-modification as the 2 '-MOE of including but not limited to of exemplary high-affinity.In alternative embodiment of the present invention, it is not 2 '-O-(CH that high-affinity is modified2)nThe sugar-modified nucleotide of H (n=1-6).In other alternative embodiment, the nucleotide of modifying through high-affinity is not 2 '-OCH3Or 2 '-OCH2CH2OCH3Nucleotide.In certain embodiments, the nucleotide of modifying through high-affinity is given the Δ T of at least 1, at least 1.5, at least 2, at least 2.5, at least 3.0, at least 3.5 or at least 4.0 degree/nucleotidemSome high-affinity nucleotide modifications can increase toxicity known in the art.As shown here, short antisense compounds with high-affinity modification of finite population (2-6 usually) demonstrates few the increasing even of toxicity to be increased, but keeping or improved affinity target RNA, also reduce significantly simultaneously the expression of RNA target.Short antisense compounds of the present invention can be chosen wantonly and comprise conjugated group, for example cholesterol or C16
1. some pterion
In certain embodiments, lack antisense compounds and comprise 5 ' pterion and/or 3 ' pterion.In this embodiment, the feature in the feature in 3 ' pterion and 5 ' pterion is independent the selection.Therefore, in this embodiment, the monomer number (length) in the monomer number in the 5 ' pterion and the 3 ' pterion can be identical or can be different; Modification in the 5 ' pterion (if any) can be identical with the modification (if any) in the 3 ' pterion, and perhaps this modification (if any) can be different; Dan Julian key in Dan Julian key in the 5 ' pterion and the 3 ' pterion can be identical or can be different.
In certain embodiments, the pterion comprises one, two or three monomers (being that length is 1,2 or 3 monomer).In certain embodiments, the monomer in pterion is modified.In some this embodiment, the monomer in pterion is modified to improve the affinity of antisense compounds to its target nucleic acids.In certain embodiments, the monomer in pterion is nucleoside or nucleotide.In some this embodiment, the nucleoside in pterion or nucleotide comprise 2 ' and modify.In some this embodiment, the monomer in pterion (nucleoside or nucleotide) is BNA.In some this embodiment, the monomer in pterion is selected from α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA, β-D-methylene oxygen base (4 '-CH2-O-2 ') BNA, ethyleneoxy group (4 '-(CH2)2-O-2 ') BNA, amino oxygen base (4 '-CH2-O-N (R)-2 ') BNA and oxygen base amino (4 '-CH2-N (R)-O-2 ') BNA.In certain embodiments, the monomer in pterion comprises in 2 ' position and is selected from following substituent group: pi-allyl, amino, azido, thio group, O-pi-allyl, O-C1-C10Alkyl ,-OCF3, O-(CH2)2-O-CH3, 2 '-O (CH2)2SCH3, O-(CH2)2-O-N (Rm) (Rn) and O-CH2-C (=O)-N (Rm) (Rn), each R whereinmAnd RnIndependent is H or substituted or unsubstituted C1-C10Alkyl.In certain embodiments, the monomer in pterion is 2 ' MOE nucleotide.
In certain embodiments, the Dan Julian key in the pterion is natural internucleotide linkage.In certain embodiments, the Dan Julian key in the pterion is between the nucleotide of non-natural or connects key between nucleoside.In certain embodiments, the Dan Julian key in the pterion more can be resisted one or more nucleases than natural internucleotide linkage.In some this embodiment, the Dan Julian key in the pterion is that thiophosphate connects key (P=S).Wherein have in the embodiment of a Dan Julian key of surpassing in the pterion at some, each Dan Julian key is identical mutually.Wherein have in the embodiment of a Dan Julian key of surpassing in the pterion at some, each Dan Julian key is different mutually.
Those of ordinary skills will appreciate that, can with feature discussed above and modify with any be combined into to exercise be used for preparing the pterion.The limiting examples that following table provides has shown how to prepare the pterion by the Dan Julian key of selecting certain monomer number, list to gather in the middle of modification (if any) and the pterion.
| Length | Monomer type/modification | Dan Julian key in the middle of the pterion |
| 1 | 2’MOE | Do not have |
| 1 | BNA | Do not have |
| 1 | Methylene oxygen base BNA | Do not have |
| 1 | ENA | Do not have |
| 2 | 2’MOE | P=S |
| 2 | BNA | P=S |
| 2 | Methylene oxygen base BNA | P=S |
| 2 | ENA | P=S |
| 2 | 2’MOE | P=O |
| 2 | BNA | P=O |
| 2 | Methylene oxygen base BNA | P=O |
| 2 | ENA | P=O |
| 3 | 2’MOE | P=S |
| 3 | BNA | P=S |
| 3 | Methylene oxygen base BNA | P=S |
| 3 | ENA | P=S |
| 3 | 2’MOE | P=O |
| 3 | BNA | P=O |
| 3 | Methylene oxygen base BNA | P=O |
| 3 | ENA | P=O |
Wherein comprise in two, three or four the monomeric embodiments in the pterion at some, these two, three or four monomers all comprise identical modification (if any).Wherein comprise in two, three or four the monomeric embodiments in the pterion at some, in these two, three or four nuclear bases one or more different modifications of one or more and one or more all the other monomeric one or more modifications that comprise are arranged.
2. some is at interval
In certain embodiments, lacking antisense compounds comprises between 5 ' pterion and 3 ' pterion at interval.In certain embodiments, comprise 5,6,7,8,9,10,11,12,13 or 14 monomers at interval.In certain embodiments, Jian Ge monomer is not modified deoxyribonucleotide.In certain embodiments, Jian Ge monomer is not modified ribonucleotide.In certain embodiments, modify (if any) at interval and cause producing such antisense compounds, when in conjunction with its target nucleic acids, this chemical compound can be supported the cutting of RNA enzyme (including but not limited to RNA enzyme H).
In certain embodiments, the Dan Julian key in the interval is natural internucleotide linkage.In certain embodiments, the Dan Julian key in the interval is company's key of non-natural.In some this embodiment, the Dan Julian key in more can be resisted one or more nucleases than natural internucleotide linkage at interval.In some this embodiment, the Dan Julian key in is that thiophosphate connects key (P=S) at interval.In certain embodiments, each the Dan Julian key in the interval is all identical mutually.In certain embodiments, each the Dan Julian key in the interval is not identical all.
Those of ordinary skills will appreciate that, can with feature discussed above and modify with any be combined into to exercise be used for preparation at interval.The limiting examples that following table provides has shown how to prepare at interval by the Dan Julian key of selecting certain monomer number, list to gather in the middle of modification (if any) and the interval region.
| Length | Monomer type/modification | Dan Julian key at interval |
| 5 | DNA | P=S |
| 6 | DNA | P=S |
| 7 | DNA | P=S |
| 8 | DNA | P=S |
| 9 | DNA | P=S |
| 10 | DNA | P=S |
| 11 | DNA | P=S |
| 12 | DNA | P=S |
| 13 | DNA | P=S |
| 14 | DNA | P=S |
| 6 | DNA | P=O |
| 7 | DNA | P=O |
| 8 | DNA | P=O |
| 9 | DNA | P=O |
| 10 | DNA | P=O |
| 11 | DNA | P=O |
| 12 | DNA | P=O |
| 8 | RNA | P=S |
| 9 | RNA | P=S |
| 10 | RNA | P=S |
| 11 | RNA | P=S |
| 12 | RNA | P=S |
Some interband every the antisense oligomeric compounds
Those of ordinary skills will appreciate that, can be selected pterion discussed above and interval, make up with multiple compound mode then, with produce interband every oligomeric compounds, include but not limited to interband every the antisense oligomeric compounds and interband every antisense oligonucleotide.The feature in 5 ' pterion and 3 ' pterion (length, modification, Lian Jian) can be selected independently of each other.Feature at interval comprises at least one and the relative modification difference of feature in 5 ' pterion and at least one and the relative modification difference in 3 ' pterion (being that at least one modification difference must be arranged between each adjacent area, so that these adjacent areas are distinguished mutually).Each feature at interval can be selected in addition independently.
In certain embodiments, the Dan Julian key in the middle of the pterion is identical with central at interval Dan Julian key.In certain embodiments, the Dan Julian key in the middle of the pterion is different with central at interval Dan Julian key.In some this embodiment, that the Dan Julian key of pterion and bridge joint at interval is identical with Dan Julian key in the pterion.In certain embodiments, with the pterion with at interval the Dan Julian key of bridge joint is identical with Dan Julian key in the interval.In certain embodiments, lack antisense compounds and have the same company's key from the beginning to the end.In some this embodiment, all keys all are thiophosphate (P=S) Lian Jian.
Those of ordinary skills will appreciate that, can with 3 ' pterion discussed above, 5 ' pterion, interval and connect key with any be combined into to exercise be used for preparing gapmer.The limiting examples that following table provides how to have shown by select a certain 5 ' pterion, at interval, 3 ' pterion and some will be at interval and company's key of each pterion bridge joint prepare gapmer.
In certain embodiments, oligomeric compounds disclosed herein can comprise about 8 to about 16, preferred 9-15, more preferably 9-14, more preferably 10-14 monomer (promptly about 8 monomer) to about 16 connections.Those of ordinary skills will appreciate that this comprises the antisense compounds of 8,9,10,11,12,13,14,15 or 16 nuclear bases.In certain embodiments, oligomeric compounds is an antisense compounds.
In certain embodiments, the length of lacking antisense compounds is 8 nucleotide.
In certain embodiments, the length of lacking antisense compounds is 9 nucleotide.
In certain embodiments, the length of lacking antisense compounds is 10 nucleotide.
In certain embodiments, the length of lacking antisense compounds is 11 nucleotide.
In certain embodiments, the length of lacking antisense compounds is 12 nucleotide.
In certain embodiments, the length of lacking antisense compounds is 13 nucleotide.
In certain embodiments, the length of lacking antisense compounds is 14 nucleotide.
In certain embodiments, the length of lacking antisense compounds is 15 nucleotide.
In certain embodiments, the length of lacking antisense compounds is 16 nucleotide.
In certain embodiments, the length of lacking antisense compounds is 8 monomers.In certain embodiments, the length of lacking antisense compounds is 9 monomers.In certain embodiments, the length of lacking antisense compounds is 10 monomers.In certain embodiments, the length of lacking antisense compounds is 11 monomers.In certain embodiments, the length of lacking antisense compounds is 12 monomers.In certain embodiments, the length of lacking antisense compounds is 13 monomers.In certain embodiments, the length of lacking antisense compounds is 14 monomers.In certain embodiments, the length of lacking antisense compounds is 15 monomers.In certain embodiments, the length of lacking antisense compounds is 16 monomers.In certain embodiments, lack antisense compounds and comprise 9-15 monomer.In certain embodiments, lack antisense compounds and comprise 10-15 monomer.In certain embodiments, lack antisense compounds and comprise 12-14 monomer.In certain embodiments, lack antisense compounds and comprise 12-14 nucleotide or nucleoside.
Those skilled in the art have learnt that behind the illustrational short antisense compounds of this paper institute, it goes without doing, and too many experiment just can be determined more short antisense compounds.
In certain embodiments, lacking antisense compounds comprises its one or both sides and is connected to the interval that surpasses a pterion.Therefore, in certain embodiments, short antisense compounds comprises two or more 5 ' pterions and two or more 3 ' pterion.In certain embodiments, lack antisense compounds and comprise one 5 ' pterion and two or more 3 ' pterion.In certain embodiments, lack antisense compounds and comprise one 3 ' pterion and two or more 5 ' pterion.Some this embodiment comprises for example with lower area: the 1 ' pterion-abutment-the 25 ' pterion-abutment-at interval-and abutment-the 23 ' pterion-abutment-the 1 ' pterion.In this embodiment, each zone is adjacent the zone and compares and have at least one and modify difference.Therefore pterion and the 1,, in this embodiment, the 25 ' pterion and the 23 ' pterion with compare at interval with the 1 ' ' pterion compares, and independently comprises one or more modification differences separately.In this embodiment, the 1 ' modification and the 1 in pterion ' one of the modification in pterion or both can be identical or different with modification (if any) at interval.
4. some conjugated group
In one aspect, oligomeric compounds is to modify by the covalently bound of one or more conjugated groups.In general, conjugated group can be modified one or more characteristics of connected oligomeric compounds, includes but not limited to pharmacodynamics, pharmacodynamics, combination, absorption, cell distribution, cellular uptake, electric charge and removing.Conjugated group is directly or by optional coupling part or linking group to be connected with parent compound such as oligomeric compounds in the conventional use of chemical field.The preferred list of conjugated group includes but not limited to intercalator (intercalator), reporter molecule, polyamine, polyamide, Polyethylene Glycol, thioether, polyethers, cholesterol, sulfo-cholesterol, cholic acid part, folic acid, lipid, phospholipid, biotin, azophenlyene, phenanthridines, anthraquinone, diamantane (obsolete), acridine, fluorescein, rhodamine, coumarin and dyestuff.
Preferably be suitable for conjugated group of the present invention and comprise lipid part such as cholesterol moiety (Letsinger et al., Proc.Natl.Acad.Sci.USA, 1989,86,6553); Cholic acid (Manoharan et al., Bioorg.Med.Chem.Lett., 1994,4,1053); Thioether, for example hexyl-S-trityl mercaptan (Manoharan et al., Ann.N.Y.Acad.Sci., 1992,660,306; Manoharan et al., Bioorg.Med.Chem.Let., 1993,3,2765); Sulfo-cholesterol (Oberhauser et al., Nucl.Acids Res., 1992,20,533); Aliphatic chain, for example dodecanediol or or undecyl residue (Saison-Behmoaras et al., EMBO J., 1991,10,111; Kabanov et al., FEBSLett., 1990,259,327; Svinarchuk et al., Biochimie, 1993,75,49); Phospholipid, for example two-cetyl-rac-glycerol or triethyl ammonium-1,2-two-O-cetyl-rac-glycerol-3-H-phosphate ester (Manoharan et al., Tetrahedron Lett., 1995,36,3651; Sheaet al., Nucl.Acids Res., 1990,18,3777); Polyamine or polyglycol chain (Manoharan et al., Nucleosides ﹠amp; Nucleotides, 1995,14,969); Adamantane acetic acid (Manoharan et al., Tetrahedron Lett., 1995,36,3651); Palmityl part (Mishra et al., Biochim.Biophys.Acta, 1995,1264,229); Perhaps 18-amine. or hexyl amino-carbonyl-oxycholesterin part (Crooke et al., J.Pharmacol.Exp.Ther., 1996,277,923).
Linking group or difunctionality coupling part (for example well known in the art those) are suitable for chemical compound provided herein.Linking group can be used for chemical functional group, conjugated group, reporter group and other groups and parent compound for example are connected in the selectivity site in the oligomeric compounds.In general, the difunctionality coupling part comprises the hydrocarbyl portion with two functional groups.One of them functional group is through selecting with binding purpose parent molecule or chemical compound, and another is through selecting with in conjunction with any selected group basically, as chemical functional group or conjugated group.In some embodiments, joint (linker) comprises unitary chain structure of repetitive such as ethylene glycol or aminoacid or oligomer.Routine is used for the example of the functional group of difunctionality coupling part, includes but not limited to the nucleophile that is used for the electrophile of nucleophilic group reaction and is used for reacting with electrophilic group.In some embodiments, the difunctionality coupling part comprises amino, hydroxyl, carboxylic acid, mercaptan, unsaturated bond (for example two keys or triple bond) etc.Some limiting examples of difunctionality coupling part comprise 8-amino-3,6-two oxa-s sad (ADO), 4-(N-maleimide ylmethyl) cyclohexane extraction-1-formic acid succinimide ester (SMCC) and 6-aminocaprolc acid (AHEX or AHA).Other linking group includes but not limited to substituted C1-C10Alkyl, substituted or unsubstituted C2-C10Substituted or the unsubstituted C of thiazolinyl2-C10Alkynyl, wherein the non-limiting list of preferred substituted comprises hydroxyl, amino, alkoxyl, carboxyl, benzyl, phenyl, nitro, mercaptan, thio alkoxy, halogen, alkyl, aryl, thiazolinyl and alkynyl.
5. synthetic, purification and analysis
Modified and the not modified nucleoside and the oligomerization of nucleotide, can be according to program (the Protocols for Oligonucleotides and Analogs that in the document DNA is reported, Ed.Agrawal (1993), Humana Press) and/or to the program (Scaringe of RNA report, Methods (2001), 23,206-217.Gait et al., Applications of Chemicallysynthesized RNA in RNA:Protein Interactions, Ed.Smith (1998), 1-36.Gallo et al., Tetrahedron (2001), 57,5707-5713) carry out.
Oligomeric compounds provided herein can be prepared expediently and routinely by the known technology in the solid phase synthesis.Have several manufacturers to sell and carry out this synthetic equipment, for example comprise Applied Biosystems (Foster City, CA).In addition or or, can adopt this synthetic any other means of carrying out well known in the art.Use similar techniques to prepare oligonucleotide such as thiophosphate and alkyl derivative, this is well-known.The present invention is not subjected to the restriction of antisense compounds synthetic method.
The method of purification and analysis oligomeric compounds is well known to a person skilled in the art.Analytical method comprises capillary electrophoresis (CE) and electron spray-mass spectrum.This synthesizing with analytical method can carry out in porous plate.Method of the present invention is not subjected to the restriction of oligomer purification process.
D. antisense mechanism
Antisense mechanism (mechanism) is the mechanism that all that relates to the hybridization of certain chemical compound and target nucleic acids, wherein Za Jiao consequence or effect are that target degraded or target occupy, and are accompanied by to relate to for example to transcribe or the stopping of cell mechanism (the cellular machinery) of montage.
One type the antisense mechanism that relates to the target degraded comprises RNA enzyme H.RNA enzyme H is a kind of cell endonuclease that can cut the RNA chain of RNA:DNA duplex.Known in this field, the strand antisense compounds of " DNA sample " can cause the RNA enzyme H activity in the mammalian cell.Therefore the activation of RNA enzyme H causes the cutting of RNA target, thereby greatly strengthens the efficient of the oligonucleotide mediated inhibition to gene expression of DNA sample.
In certain embodiments, through the antisense compounds of chemical modification to the affinity of target RNA than non-modified DNA height.In some this embodiment, this higher affinity causes the raising of usefulness, the feasible this chemical compound that can give than low dosage, and the toxicity probability descends, and therapeutic index is improved and whole medical expense descends.
Present disclosure specification proves, to be incorporated in the antisense compounds through the high-affinity nucleotide and the nucleoside of chemical modification, can make and to design length 8-16 the short antisense compounds of examining base, target RNA and/or target proteins matter that this weak point antisense compounds can be used for reducing cell, tissue and animal (including but not limited to the people) with the usefulness and the improved therapeutic index of raising.Therefore, in certain embodiments, the present invention is to provide so short antisense compounds, it comprises the high-affinity nucleotide modification that can be used for reducing target RNA in the body.Some this short antisense compounds also can be effective under than the lower dosage of the antisense compounds of describing before, and this makes and can reduce toxicity and treatment cost.In addition, some short antisense compounds has bigger oral administration probability.
Be to satisfy the demand to more potent antisense compounds, this paper provides the short antisense compounds comparing activity in vivo with longer chemical compound and improve (length 8-16, preferably 9-15, more preferably 9-14, more preferably 10-14 nucleotide).Some short antisense compounds is the gapmer chemical compound that comprises in 3 ' and 5 ' terminal (pterion) of chemical compound through the nucleotide of high-affinity chemical modification.In certain embodiments, although the adding of the nucleotide of modifying through high-affinity can make that antisense compounds length is shorter, target RNA in its predetermined body there are activity and specificity.What this paper imagined is so short antisense compounds, and wherein each pterion independently comprises 1-3 the nucleotide of modifying through high-affinity.In certain embodiments, this high-affinity modification is sugar-modified.The nucleotide of modifying through high-affinity includes but not limited to BNA and other nucleotide through 2 '-modification, as 2 '-MOE nucleotide.Also imagination is the short antisense compounds with at least one modified internucleotide linkage (for example thiophosphate internucleotide linkage).In certain embodiments, short antisense compounds of the present invention can have between all thiophosphate nucleoside and connects key.The optional conjugated group that comprises of short antisense compounds.As shown here, short antisense compounds is stronger to the affinity of DNA than them to the affinity of target RNA, and shows that by the minimizing of target mRNA and the minimizing of multiple disease indication they are more potent significantly in vivo.
This paper uses this point, promptly participate in to regulate glucose metabolism or removing, lipid metabolism, cholesterol but thanks or the RNA of insulin metabolism, is the RNA in any biological approach that participates in these processes of adjusting.This RNA is well known in the art.The example of target gene includes but not limited to that ApoB-100 (also claims APOB; Ag (x) antigen; ApoB-48; Apolipoprotein B; Apolipoprotein B-100; Apo B-48) and GCGR (also claim glucagon receptor; GR), CRP, DGAT2, GCCR, PCSK9, PTEN, PTP1B, SGLT2 and SOD1.
1. the adjusting of target expression
In certain embodiments, identify target and design the antisense oligonucleotide that to regulate this target or its expression.In certain embodiments, the oligomeric compounds of design targeting target nucleic acids molecule, this may be a rapid process of multistep.Usually, the target proteins matter of this process from identifying that its activity is to be regulated identifies that then its expression can produce the nucleic acid of this target proteins matter.In certain embodiments, the design of antisense compounds cause obtaining can with by the antisense compounds of the making nucleic acid molecular hybridization of targeting.In certain embodiments, this antisense compounds is antisense oligonucleotide or antisense oligonucleoside.In certain embodiments, antisense compounds and target nucleic acids are complementary mutually.In some this embodiment, antisense compounds and target nucleic acids are perfect complementary.In certain embodiments, antisense compounds comprises a mispairing.In certain embodiments, antisense compounds comprises two mispairing.In certain embodiments, antisense compounds comprises three or more mispairing.
The adjusting of the expression of target nucleic acids can realize by the nucleic acid function that changes any number.In certain embodiments, the function of RNA to be regulated includes but not limited to easy bit function, and the transposition function includes but not limited to that RNA translocates to the position of protein translation, RNA and translocates in the middle of the cell and carry out the position that the position of the synthetic and protein of RNA from the translation of this RNA is far apart.The RNA machining functions that can be regulated includes but not limited to that the montage (causing producing one or more RNA kinds (RNA species)) of this RNA, the 3 ' maturation that adds medicated cap, this RNA and the catalytic activity that relates to this RNA or complex of this RNA form (it can participate among (engaged in) this RNA or by this RNA and promote).The adjusting of expressing can cause the level of one or more nucleic acid species (nucleic acid species) to improve or the level of one or more nucleic acid species reduces, and described raising or reduction are interim or are in clean steady-state level (by netsteady state level).Therefore, in one embodiment, the adjusting of expression can mean the raising or the reduction of target RNA or protein level.In another embodiment, the adjusting of expression can mean the raising or the reduction of one or more RNA montage products, the perhaps variation of the ratio of two or more montage products.
In certain embodiments, the expression of target gene be with comprise about 8 to about 16, preferred 9-15, more preferably 9-14, more preferably the oligomeric compounds of 10-14 monomer (promptly about 8 monomer to about 16 connections) is regulated.Those of ordinary skills will appreciate that this comprises the method that the antisense compounds of one or more 8,9,10,11,12,13,14,15 or 16 nuclear of use bases is regulated the expression of target gene.
In certain embodiments, the method for adjusting target gene comprises that using length is the short antisense compounds of 8 nuclear bases.In certain embodiments, the method for adjusting target gene comprises that using length is the short antisense compounds of 9 nuclear bases.In certain embodiments, the method for adjusting target gene comprises that using length is the short antisense compounds of 8 nuclear bases.In certain embodiments, the method for adjusting target gene comprises that using length is the short antisense compounds of 10 nuclear bases.In certain embodiments, the method for adjusting target gene comprises that using length is the short antisense compounds of 10 nuclear bases.In certain embodiments, the method for adjusting target gene comprises that using length is the short antisense compounds of 11 nuclear bases.In certain embodiments, the method for adjusting target gene comprises that using length is the short antisense compounds of 12 nuclear bases.In certain embodiments, the method for adjusting target gene comprises that using length is the short antisense compounds of 13 nuclear bases.In certain embodiments, the method for adjusting target gene comprises that using length is the short antisense compounds of 14 nuclear bases.In certain embodiments, the method for adjusting target gene comprises that using length is the short antisense compounds of 15 nuclear bases.In certain embodiments, the method for adjusting target gene comprises that using length is the short antisense compounds of 16 nuclear bases.
In certain embodiments, the method for the expression of adjusting target gene comprises that use comprises 9-15 monomeric short antisense compounds.In certain embodiments, the method for the expression of adjusting target gene comprises that use comprises 10-15 monomeric short antisense compounds.In certain embodiments, the method for the expression of adjusting target gene comprises that use comprises 12-14 monomeric short antisense compounds.In certain embodiments, the method for the expression of adjusting target gene comprises that use comprises the short antisense compounds of 12 or 14 nucleotide or nucleoside.
2. hybridization
In certain embodiments, antisense compounds as enough complementary degree when avoiding under the bonded condition of needs specificity antisense compounds and non-target nucleic acids sequence generation non-specific binding, then it is with regard to the energy specific hybrid, described condition measure in vivo or medical treatment treatment situation under be physiological condition, be the condition of carrying out this mensuration in the situation of external test.
" stringent hybridization condition " used herein or " stringent condition " refer to that antisense compounds can hybridize with its target sequence but the condition few with the hybridization of other sequences.Stringent condition is sequence-dependent, can be different in different situations." stringent condition " of the hybridization of antisense compounds and target nucleic acids is by the characteristic of antisense compounds and forms and reach the algoscopy of studying them according to this and determine.
3. complementary
This area recognizes that mixing that the nucleotide affinity is modified can make than not modified chemical compound the more mispairing of more number is arranged.Similarly, comparable other oligonucleotide sequences of some few nucleotide sequence more can be tolerated mispairing.Those of ordinary skills can be for example by measuring melting temperature (Tm), determine the suitable mispairing number between each oligonucleotide or between certain oligonucleotide and the target nucleic acids.TmOr Δ TmCan go out by the technique computes that those of ordinary skills know.For example, and Freier etc. (Nucleic Acids Research, 1997,25,22:4429-4443) technology of Miao Shuing can allow those skilled in the art assess the ability of nucleotide modification aspect the melting temperature that improves the RNA:DNA duplex.
4. homogeneity
Antisense compounds or its part can have definite (defined) homogeneity percentage rate with certain SEQ ID NO or the chemical compound with specific Isis number.As used herein, promptly certain sequence is when it and sequence disclosed herein have identical nuclear base pairing ability, and then the sequence of it and the disclosure has homogeneity.For example, wherein contain uracil and can be considered to homogeneity, because uracil and thymidine can both match with adenine with the RNA of the thymidine (thymidine) in the open sequence that replaces chemical compound described herein.This homogeneity can be on the whole length of oligomeric compounds, perhaps in the part of antisense compounds (for example, nuclear base 1-20 and certain 20-mer of certain 27-mer can be compared, to determine the homogeneity percentage rate of this oligomeric compounds and this SEQ ID NO).Those skilled in the art recognize that certain antisense compounds does not need to have with the same sequence of those chemical compounds described herein and just can play and the similar function of antisense compounds described herein.The present invention also provides the shortening version (version) of antisense compounds teaching herein, the nonidentity version of antisense compounds perhaps teaching herein.The nonidentity version is that wherein each base does not have active those antisense compounds of the pairing identical with antisense compounds disclosed herein.Each base is because shorter or have at least one abasic site (abasic site) and do not have identical pairing activity.Perhaps, the nonidentity version can comprise that at least one is had the base (for example G can be replaced by C, A or T) that the active different bases of different pairings have replaced.The homogeneity percentage rate is to calculate according to the base number that has with the same base pairing corresponding to the SEQ ID NO that is compared or antisense compounds.The nonidentity base can be adjacent each other, perhaps can be distributed in oligonucleotide everywhere, and perhaps both of these case has.
For example, have certain 16-mer of the sequence identical, 80% homogeneity is arranged with this 20-mer with the nuclear base 2-17 of certain 20-mer.Perhaps, contain four nuclear bases with different certain 20-mer of this 20-mer, also 80% homogeneity is arranged with this 20-mer.Have certain 14-mer of the sequence identical, 78% homogeneity is arranged with this 18-mer with the nuclear base 1-14 of certain 18-mer.This calculating is fully in those skilled in the art's limit of power.
The homogeneity percentage rate is based on there is ratio in nuclear base in the original series in modified sequence percent.Therefore, the 30 nuclear base antisense compounds of sufficient sequence that comprise the complementary series (complement) of the 20 nuclear active target sections of base (target segment), can have the part that 100% homogeneity is arranged with the complementary series of the active target section of this 20 nuclear base, also comprise 10 other nuclear base portions simultaneously.In the situation of this description, the complementary series of active target section can constitute single part.In preferred embodiments, at least a portion of the complementary series of the active target section that provides of oligonucleotide provided herein and this paper has at least 80%, at least 85%, at least 90%, at least 95%, at least 96%, at least 97%, at least 98%, at least 99% or 100% homogeneity.
E. target nucleic acids, zone and section
In certain embodiments, can design short antisense compounds and come any target nucleic acids of targeting.In certain embodiments, the relevant clinically target of target nucleic acids coding.In this embodiment, can produce clinical benefit to the adjusting of target nucleic acids.Some target nucleic acids includes but not limited to the target nucleic acids that table 1 is listed.
In certain embodiments, target nucleic acids is the nucleic acid molecules of coding ApoB.The nucleic acid molecules of coding ApoB includes but not limited to SEQ ID NO:1 and SEQ ID NO:2.
In certain embodiments, target nucleic acids is the nucleic acid molecules of coding SGLT2.The nucleic acid molecules of coding SGLT2 includes but not limited to SEQ ID NO:3.
In certain embodiments, target nucleic acids is the nucleic acid molecules of coding PCSK9.The nucleic acid molecules of coding PCSK9 includes but not limited to SEQ ID NO:4.
In certain embodiments, target nucleic acids is the nucleic acid molecules of coding SOD1.The nucleic acid molecules of coding SOD1 includes but not limited to SEQ ID NO:5.
In certain embodiments, target nucleic acids is the nucleic acid molecules of coding CRP.The nucleic acid molecules of coding CRP includes but not limited to SEQ ID NO:3.
In certain embodiments, target nucleic acids is the nucleic acid molecules of coding GCCR.The nucleic acid molecules of coding GCCR includes but not limited to SEQ ID NO:7 and SEQ ID NO:8.
In certain embodiments, target nucleic acids is the nucleic acid molecules of coding GCGR.The nucleic acid molecules of coding GCGR includes but not limited to SEQ ID NO:9.
In certain embodiments, target nucleic acids is the nucleic acid molecules of encoding D GAT2.The nucleic acid molecules of encoding D GAT2 includes but not limited to SEQ ID NO:10.
In certain embodiments, target nucleic acids is the nucleic acid molecules of coding PTP1B.The nucleic acid molecules of coding PTP1B includes but not limited to SEQ ID NO:11 and SEQ ID NO:12.
In certain embodiments, target nucleic acids is the nucleic acid molecules of coding PTEN.The nucleic acid molecules of coding PTEN includes but not limited to SEQ ID NO:14 or SEQ ID NO:15.
Table 1: some target nucleic acids
The targeting process generally includes at least one such target zone, section or site of determining that target nucleic acids is central, and this target zone, section or site can make the antisense interaction occur, and make to obtain required effect.
In certain embodiments, 5 '-least significant end nucleotide in target zone is 5 ' target site of short antisense compounds, and 3 '-least significant end nucleotide in target zone is 3 ' target site of this identical short antisense compounds.In certain embodiments, 5 '-least significant end nucleotide in target zone is 5 ' target site of short antisense compounds, and 3 '-least significant end nucleotide in target zone is 3 ' target site of different short antisense compounds.In certain embodiments, the target zone comprises apart from 5 ' target site or the interior nucleotide sequence of 10,15 or 20 the nucleotide scopes in 3 ' target site.
In certain embodiments, the target zone is the zone of determining (structurallydefined) on the structure of nucleic acid.For example, in some this embodiment, 3 ' UTR, 5 ' UTR, exon, intron, coding region, translation initiation district, translation termination district or other nucleic acid region of determining can be contained in the target zone.
On the target nucleic acids by having one or more active short antisense compounds to the determined position of its targeting, be called " active target section ".In certain embodiments, having one or more active short antisense compounds is target RNA to the target nucleic acids of its targeting.When active target section is when being determined by a plurality of short antisense compounds, these chemical compounds preferably are separated by on target sequence and are no more than about 10 nucleotide, more preferably on target sequence, be separated by and be no more than about 5 nucleotide, also more preferably these short antisense compounds are successive, and most preferably these short antisense compounds are eclipsed.The short antisense compounds of in the middle of the active target section each has great difference on active (for example being determined by suppressing percent).Active short antisense compounds is those the short antisense compounds that can regulate the expression of its target nucleic acids (including but not limited to target RNA).Active short antisense compounds can suppress the expression at least 10% of its target RNA, preferred 20%.In a preferred embodiment, at least about 50%, the short antisense compounds of preferred about 70% the active target section of targeting can regulate the expression at least 40% of its target RNA.Determining the required inhibition level of active short antisense compounds at one more in the embodiment preferred, is to determine according to the result in order to the screening gained of determining active target section.
Suitable target section be active short antisense compounds institute targeting the target zone at least about 8 nuclear base portions.The target section can comprise such DNA or RNA sequence, these sequences comprise 5 ' of a target section from each illustrative (illustrative) target section-terminal at least 8 continuous kernel bases (remaining nuclear base is so continuous one section sequence (consecutive stretch) of same DNA or RNA, this section sequence just in time the upstream of 5 ' of this target section-end begin and proceed to this DNA or RNA comprise about 8 examine bases to about 16 till).The target section is also represented by such DNA or RNA sequence, these sequences comprise 3 ' of a target section from each illustrative target section-terminal at least 8 continuous kernel bases (remaining nuclear base is so continuous one section sequence of same DNA or RNA, this section sequence just in time the downstream of 3 ' of this target section-end begin and proceed to this DNA or RNA comprise about 8 examine bases to about 16 till).Also will be appreciated that, antisense target section can be represented by such DNA or RNA sequence, these sequences comprise at least 8 continuous kernel bases from the interior section of the sequence of certain illustrative target section, and can extend to short antisense compounds along either direction or both direction and comprise about 8 till about 16 nuclear bases.Those skilled in the art rely on the illustrated target section of this paper, and it goes without doing, and too much experiment just can identify more target section.
In case identify one or more targets zone, section or site, just can select the short antisense compounds that target is had enough complementarity, can be enough fully and with enough specificitys the short antisense compounds of hybridization takes place, to produce required effect.
Also can be with the such zone in the short antisense compounds targeting target nuclear base sequence, this zone comprises any continuous kernel base of length 8-16 nuclear base on the target nucleic acids molecule.
Target section length 8-16 nuclear base, that comprise one section sequence (stretch) of at least 8 continuous kernel bases selecting in the middle of the illustrative target section is also thought to be suitable for carrying out targeting.Therefore, lacking antisense compounds also can contain 8-16 that this paper confirms as in the middle of those sections of beginning in certain specific 5 ' target site and examine base.Around these zones 50, preferred 25, more preferably any 8,9,10,11 in 16 the nuclear base scopes (perimeter) or the more preferably section of 12,13,14,15 or 16 continuous kernel bases, also think to be suitable for carrying out targeting.
In another embodiment, " the suitable target section " that this paper confirmed can be applied to screen the short antisense compounds of the other expression that can regulate target nucleic acids." regulator " is such chemical compound, and they can reduce or improve the expression of target nucleic acids, includes the complementary 8 nuclear base portions of at least one and target section.Screening technique comprises such step: make the target section of nucleic acid contact and select one or more energy reductions or improve the candidate modulator of the expression of target nucleic acids with one or more candidate modulator.Can regulate the expression of (for example reduce or improve) target nucleic acids in case prove these one or more candidate modulator, this regulator can be applicable to the further research of function do to target then, perhaps uses, diagnoses and use or the medicine for treatment agent as research according to the present invention.
For all short antisense compounds that this paper discusses, sequence, monomer, single poly-modification and Dan Julian key can independently be selected separately.In certain embodiments, lacking antisense compounds is to describe by die body (motif).In this embodiment, any die body can use with any sequence, no matter whether this sequence and/or die body be clearly open in this article.In certain embodiments, lack antisense compounds and comprise the modification that is unsuitable for describing (for example, the diverse location place in the middle of it comprises several different modifying and/or connects the short antisense compounds of key) by die body.Can be any sequence and mix this combination, no matter whether this sequence is open in this article.Originally the appended sequence table of presenting a paper provides some to be independent of the nucleotide sequence of chemical modification.Though this sequence table is confirmed as each sequence " RNA " or " DNA " as required, actually, these sequences can be modified with any combination of chemical modification and/or die body.
In certain embodiments, lack antisense compounds and comprise the monomer that at least one is modified through high-affinity.In certain embodiments, provide the targeting coding to include but not limited to the short antisense compounds of the nucleic acid molecules of following target: ApoB-100 (also claims APOB; Ag (x) antigen; ApoB-48; Apolipoprotein B; Apolipoprotein B-100; Apo B-48), GCGR (also claims glucagon receptor; GR), CRP, DGAT2, GCCR, PCSK9, PTEN, PTP1B, SGLT2 and SOD1.In some this embodiment, the nucleic acid molecules of this short antisense compounds targeting coding any of these target.
F. some target
In certain embodiments, short antisense compounds can be designed to regulate any target.In certain embodiments, target is relevant clinically.In this embodiment, can produce clinical benefit to the adjusting of target.Some target is preferentially expressed in kidney.Some target is preferentially expressed in liver.Some target is relevant with metabolic disease.Some target is relevant with cardiovascular disease.In certain embodiments, target is selected from ApoB, SGLT2, PCSK9, SOD1, CRP, GCCR, GCGR, DGAT2, PTP1B and PTEN.In certain embodiments, target is selected from ApoB, SGLT2, PCSK9, SOD1, CRP, GCCR, GCGR, DGAT2 and PTP1B.In certain embodiments, target is any albumen outside the SGLT2.
In certain embodiments, lack antisense compounds and demonstrate liver and kidney specific target RNA reduction effect in the body.This specific character makes these short antisense compounds be specially adapted to suppress many target RNA that relate to metabolic disease and cardiovascular disease.Therefore, this paper provides the short antisense compounds by making described kidney or liver organization and the targeting RNA relevant with described disease to contact, and treats the method for cardiovascular disease or metabolic disease.Therefore, also provide the method for improving any indication in multiple metabolic disease or the cardiovascular disease indication with short antisense compounds of the present invention.
1.ApoB
ApoB (also claims Apolipoprotein B-100; ApoB-100; Apo B-48; ApoB-48 and Ag (x) antigen) be a kind of big glycoprotein, play indispensable effect in the assembling of lipid and secretion and in the transhipment and the receptor-mediated picked-up of different classes of lipoprotein with in sending.ApoB can carry out multiple activity, from the absorption and the processing of meals lipid, to the adjusting of circulation lipoprotein levels (Davidson and Shelness, Annu.Rev.Nutr., 2000,20,169-193).This back one behavioral illustrations it is why relevant with the atherosclerosis susceptibility, the concentration height correlation on every side of this susceptibility and the lipoprotein that contains ApoB (Davidson and Shelness, Annu.Rev.Nutr., 2000,20,169-193).ApoB-100 is the main protein component of LDL-C, and it contains this lipoprotein classification and the required domain of ldl receptor interaction.High-caliber LDL-C is the cardiovascular disease risk factor that comprises atherosclerosis.
Definition
" ApoB " is a kind of gene outcome or protein, and its expression will be regulated by lacking antisense compounds.
" ApoB nucleic acid " means the nucleic acid of any coding ApoB.For example, in certain embodiments, ApoB nucleic acid include but not limited to the to encode DNA sequence of ApoB, the RNA sequence of transcribing from the DNA of coding ApoB and the mRNA sequence of coding ApoB.
" ApoB mRNA " means the mRNA of coding ApoB.
ApoB treats indication
In certain embodiments, the invention provides the method for the expression of regulating the ApoB in the individuality, described method comprises the short antisense compounds that gives targeting ApoB nucleic acid.In certain embodiments, the invention provides the individual method of treatment, described method comprises and gives the pharmaceutical composition that one or more comprise the short antisense compounds of targeting ApoB nucleic acid.In certain embodiments, individuality suffers from hypercholesterolemia, non-familial hypercholesterolemia, familial hypercholesterolemia, the heterozygous familial hypercholesterolemia, familial hypercholesterolemia isozygotys, the Combination dyslipidemia, atherosclerosis, develop atherosclerotic risk, coronary heart disease, the coronary disease medical history, the coronary heart disease of early showing effect, one or more coronary heart disease risk factors, type ii diabetes, type ii diabetes companion dyslipidemia, dyslipidemia, hypertriglyceridemia, hyperlipemia, the high fatty acid mass formed by blood stasis, fatty degeneration of liver, non-alcoholic stellato-hepatitis or non-alcohol fatty liver.
The guilding principle that lipid reduces therapy by u.s. national cholesterol education program (NCEP) adult treatment expert scheme III (ATPIII) in calendar year 2001 set up and upgraded in 2004 (Grundyet al., Circulation, 2004,110,227-239).This guilding principle comprises acquisition complete lipoprotein general picture (profile) after fasting in 9-12 hour usually, to determine LDL-C, T-CHOL and HDL-C level.According to the guilding principle of up-to-date formulation, 130-159mg/dL, 160-189mg/dL and think critical height, height and high level respectively more than or equal to the LDL-C level of 190mg/dL.200-239mg/dL and think critical height and high level respectively more than or equal to the total cholesterol level of 240mg/dL.HDL-C level less than 40mg/dL is thought low-level.
In certain embodiments, this individuality has been confirmed as carrying out lipid reduction therapy.In some this embodiment, according to upgrading (Grundyet al. in calendar year 2001 foundation and in 2004 by u.s. national cholesterol education program (NCEP) adult treatment expert scheme III (ATPIII), Circulation, 2004,110, guilding principle 227-239), this individuality have been confirmed as carrying out lipid and have reduced therapy.In certain embodiments, need carry out its LDL-C of this individuality that lipid reduces therapy and be higher than 190mg/dL.In certain embodiments, need carry out its LDL-C of this individuality that lipid reduces therapy and be higher than 160mg/dL.In some this embodiment, its LDL-C of this individuality that need carry out lipid reduction therapy is higher than 130mg/dL.In some this embodiment, its LDL-C of this individuality that need carry out lipid reduction therapy is higher than 100mg/dL.In some this embodiment, this individuality that need carry out lipid reduction therapy should keep LDL-C to be lower than 160mg/dL.In some this embodiment, this individuality that need carry out lipid reduction therapy should keep LDL-C to be lower than 130mg/dL.In some this embodiment, this individuality that need carry out lipid reduction therapy should keep LDL-C to be lower than 100mg/dL.In some this embodiment, this individuality should keep LDL-C to be lower than 70mg/dL.
In certain embodiments, the invention provides the method that reduces the ApoB in the individuality.In certain embodiments, the invention provides the method that contains the ApoB lipoprotein that reduces in the individuality.In certain embodiments, the invention provides the method that reduces the LDL-C in the individuality.In certain embodiments, the invention provides the method that reduces the VLDL-C in the individuality.In certain embodiments, the invention provides the method that reduces the IDL-C in the individuality.In certain embodiments, the invention provides the method that reduces the non-IDL-C in the individuality.In certain embodiments, the invention provides the method that reduces the Lp (a) in the individuality.In certain embodiments, the invention provides the method that reduces the serum triglycerides in the individuality.In certain embodiments, the invention provides the method that reduces the liver tg in the individuality.In certain embodiments, the invention provides the method that reduces the Ox-LDL-C in the individuality.In certain embodiments, the invention provides the particulate method of little LDL that reduces in the individuality.In certain embodiments, the invention provides the particulate method of little VLDL that reduces in the individuality.In certain embodiments, the invention provides the method that reduces the phospholipid in the individuality.In certain embodiments, the invention provides the method that reduces the oxidized phospholipids in the individuality.
In certain embodiments, the invention provides the method that reduces the Ox-LDL-C concentration among the experimenter.In some this embodiment, the reduction of ApoB, LDL-C, VLDL-C, IDL-C, T-CHOL, non-HDL-C, Lp (a), triglyceride or Ox-LDL-C independently is selected from least 10%, at least 15%, at least 20%, at least 25%, at least 30%, at least 35%, at least 40%, at least 45%, at least 50%, at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95% and at least 100%.In some this embodiment, the reduction of ApoB, LDL-C, VLDL-C, IDL-C, T-CHOL, non-HDL-C, Lp (a), triglyceride or Ox-LDL-C independently is selected from least 20%, at least 30%, at least 40%, at least 50%, at least 60% and at least 70%.In some this embodiment, the reduction of ApoB, LDL-C, VLDL-C, IDL-C, T-CHOL, non-HDL-C, Lp (a), triglyceride or Ox-LDL-C independently is selected from least 40%, at least 50%, at least 60% and at least 70%.
In certain embodiments, the invention provides the method that improves the HDL-C concentration among the experimenter.
In certain embodiments, method provided by the invention does not reduce HDL-C.In certain embodiments, method provided by the invention does not cause the accumulation of lipid in liver.In certain embodiments, method provided by the invention does not cause fatty degeneration of liver.
In certain embodiments, can reduce again and the method for the treatment of relevant side effect when the invention provides ApoB concentration in reducing the experimenter.In some this embodiment, side effect is a liver toxicity.In some this embodiment, side effect is an abnormal liver function.In some this embodiment, side effect is that alanine aminotransferase (ALT) raises.In some this embodiment, side effect is that aspartate aminotransferase (AST) raises.
In certain embodiments, the invention provides the method that reduces the ApoB concentration among the experimenter not have to reach target LDL-C level because of lipid reduction therapy.In some this embodiment, the short antisense compounds of targeting ApoB nucleic acid is that the unique lipid that gives the experimenter reduces medicament.In some this embodiment, experimenter's lipid that acceptance (complywith) recommended of not following the doctor's advice as yet reduces therapy.In some this embodiment, Pharmaceutical composition of the present invention reduces therapy with in addition different lipid and gives altogether together.In some this embodiment, it is the LDL-Apheresis that other lipid reduces therapy.In some this embodiment, it is inhibin that other lipid reduces therapy.In some this embodiment, it is according to Ezetimibe that other lipid reduces therapy.
In certain embodiments, the invention provides the method for the ApoB concentration among the experimenter that reduction do not tolerate inhibin.In some this embodiment, because given inhibin, experimenter's creatine kinase concentration improves.In some this embodiment, because given inhibin, experimenter's abnormal liver function.In some this embodiment, because given inhibin, experimenter's myalgia.In some this embodiment, because given inhibin, the side effect of experimenter's center of origin nervous system.In certain embodiments, experimenter's inhibin of accepting to be recommended of not following the doctor's advice as yet gives.
In certain embodiments, the invention provides the method that reduces the liver tg among the experimenter.In some this embodiment, experimenter's liver tg raises.In some this embodiment, the experimenter suffers from fat hepatitis.In some this embodiment, the experimenter suffers from steatosis.In some this embodiment, the liver tg level is to measure by nuclear magnetic resonance.
In certain embodiments, the invention provides the method that reduces the coronary heart disease risk among the experimenter.In certain embodiments, the invention provides the method for the atherosclerotic progress among the experimenter that slows down.In some this embodiment, the invention provides the method that stops the atherosclerotic progress among the experimenter.In some this embodiment, the invention provides the size of the atherosclerotic plaque that reduces among the experimenter and/or the method for popular (prevalence).In certain embodiments, the method that is provided can reduce the experimenter and develop atherosclerotic risk.
In certain embodiments, the method that is provided can be improved the cardiovascular consequence among the experimenter.In some this embodiment, the improvement of cardiovascular consequence is that the risk of development coronary heart disease reduces.In some this embodiment, the improvement of cardiovascular consequence is the reduction of the incidence rate of one or more main cardiovascular events, and described incident includes but not limited to death, myocardial infarction, infraction, apoplexy, cardiogenic shock, pulmonary edema, cardiac arrest and atrial arrhythmia again.In some this embodiment, the improvement of cardiovascular consequence is confirmed by the improvement of carotid intimal medial thickness.In some this embodiment, the improvement of carotid intimal medial thickness is the reduction of thickness.In some this embodiment, the improvement of carotid intimal medial thickness is preventing of media thickness increase.
In certain embodiments, the pharmaceutical composition that comprises the short antisense compounds of targeting ApoB nucleic acid is for using in treatment.In certain embodiments, described treatment is the reduction of LDL-C, ApoB, VLDL-C, IDL-C, non-HDL-C, Lp (a), serum triglycerides, liver tg, Ox-LDL-C, little LDL granule, little VLDL, phospholipid or oxidized phospholipids in the individuality.In certain embodiments, described treatment is to following treatment of diseases: hypercholesterolemia, non-familial hypercholesterolemia, familial hypercholesterolemia, the heterozygous familial hypercholesterolemia, familial hypercholesterolemia isozygotys, the Combination dyslipidemia, atherosclerosis, develop atherosclerotic risk, coronary heart disease, the coronary disease medical history, the coronary heart disease of early showing effect, one or more coronary heart disease risk factors, type ii diabetes, type ii diabetes companion dyslipidemia, dyslipidemia, hypertriglyceridemia, hyperlipemia, the high fatty acid mass formed by blood stasis, fatty degeneration of liver, non-alcoholic stellato-hepatitis or non-alcohol fatty liver.In other embodiments, treatment is the reduction of CHD risk.In certain embodiments, treatment is atherosclerotic prevention.In certain embodiments, treatment is the prevention of coronary heart disease.
In certain embodiments, the pharmaceutical composition that will comprise the short antisense compounds of targeting ApoB nucleic acid is used for preparing the medicine in order to LDL-C, ApoB, VLDL-C, IDL-C, non-HDL-C, Lp (a), serum triglycerides, liver tg, Ox-LDL-C, little LDL granule, little VLDL, phospholipid or the oxidized phospholipids that reduces individuality.In certain embodiments, the pharmaceutical composition that will comprise the short antisense compounds of targeting ApoB nucleic acid is used to prepare in order to reduce the medicine of coronary heart disease risk.In certain embodiments, the short antisense compounds of targeting ApoB nucleic acid is used to prepare in order to treat the medicine of following disease: hypercholesterolemia, non-familial hypercholesterolemia, familial hypercholesterolemia, the heterozygous familial hypercholesterolemia, familial hypercholesterolemia isozygotys, the Combination dyslipidemia, atherosclerosis, develop atherosclerotic risk, coronary heart disease, the coronary disease medical history, the coronary heart disease of early showing effect, one or more coronary heart disease risk factors, type ii diabetes, type ii diabetes companion dyslipidemia, dyslipidemia, hypertriglyceridemia, hyperlipemia, the high fatty acid mass formed by blood stasis, fatty degeneration of liver, non-alcoholic stellato-hepatitis or non-alcohol fatty liver.
The ApoB combination treatment
In certain embodiments, the pharmaceutical composition that one or more is comprised the short antisense compounds of targeting ApoB nucleic acid gives altogether with one or more other medicament.In certain embodiments, described one or more other medicament be designed to its disease for the treatment of or disease identical with described one or more pharmaceutical compositions of the present invention.In some this embodiment, described one or more medicaments are that lipid reduces medicament.In certain embodiments, described one or more other medicament be designed to its disease for the treatment of or disease different with described one or more pharmaceutical compositions of the present invention.In certain embodiments, described one or more other medicament is designed to treat the ill effect of one or more pharmaceutical compositions of the present invention.In certain embodiments, one or more pharmaceutical compositions of the present invention are given altogether with another medicament, to treat the ill effect of other these another medicaments.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is given simultaneously.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is given at different time.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is prepared together in single dosage form.In certain embodiments, with other separately preparation of medicament of one or more pharmaceutical compositions of the present invention and one or more.
In certain embodiments, the medicament that can give altogether with the pharmaceutical composition of the short antisense compounds that comprises targeting ApoB nucleic acid comprises that lipid reduces medicament.In some this embodiment, can include but not limited to atorvastatin, simvastatin, rosuvastatin with the medicament that pharmaceutical composition of the present invention gives altogether and according to Ezetimibe.In some this embodiment, lipid is reduced medicament before giving the present composition, give.In some this embodiment, lipid is reduced medicament after giving the present composition, give.In some this embodiment, lipid is reduced medicament when giving the present composition, give.In some this embodiment, the dosage that the lipid that gives altogether reduces medicament is identical with the dosage that gives separately to be given when lipid reduces medicament.In some this embodiment, the dosage that the lipid that gives altogether reduces medicament is lower than the dosage that is given when giving lipid reduction medicament separately.In some this embodiment, the dosage that the lipid that gives altogether reduces medicament is higher than the dosage that is given when giving lipid reduction medicament separately.
In certain embodiments, it is the HMG-CoA reductase inhibitor that the lipid that gives altogether reduces medicament.In some this embodiment, the HMG-CoA reductase inhibitor is an inhibin.In some this embodiment, inhibin is selected from atorvastatin, simvastatin, pravastatin, fluvastatin and rosuvastatin.
In certain embodiments, it is cholesterol absorption inhibitor that the lipid that gives altogether reduces medicament.In some this embodiment, cholesterol absorption inhibitor is according to Ezetimibe.
In certain embodiments, it is HMG-CoA reductase inhibitor and cholesterol absorption inhibitor formulated together altogether that the lipid that gives altogether reduces medicament.In some this embodiment, it is according to Ezetimibe/simvastatin that lipid formulated together altogether reduces medicament.
In certain embodiments, it is microsomal triglyceride transfer protein inhibitor (MTP inhibitor) that the lipid that gives altogether reduces medicament.
In certain embodiments, the medicament that gives altogether is a bile acid chelating agent.In some this embodiment, bile acid chelating agent is selected from colestyramine, colestipol and colesevelam.
In certain embodiments, the medicament that gives altogether is a nicotinic acid.In some this embodiment, nicotinic acid is selected from rapid release nicotinic acid, extended release nicotinic acid and slow release nicotinic acid.
In certain embodiments, the medicament that gives altogether is Carboxymethylcellulose (fibric acid).In some this embodiment, Carboxymethylcellulose is selected from gemfibrozil, fenofibrate, chlorine Bei Te, bezafibrate and ciprofibrate.
More examples of the medicament that can give altogether with the pharmaceutical composition of the short antisense compounds that comprises targeting ApoB nucleic acid include but not limited to corticosteroid (including but not limited to prednisone); Immunoglobulin (includes but not limited to vein immunoglobulin (IVIg); Analgesic (for example acetaminophen); Antiinflammatory (including but not limited to NSAID (non-steroidal anti-inflammatory drug) (for example ibuprofen, COX-1 inhibitor and cox 2 inhibitor)); Salicylate; Antibiotic; Antiviral agent; Antifungal; Antidiabetic medicine (for example biguanide, glucosidase inhibitor, insulin, sulfonylureas and thiazolidinediones); The adrenergic modulation agent; Diuretic; Hormone (for example short anabolism steroid, androgen, estrogen, calcitonin, progesterone, somatostatin and thyroxin); Immunomodulator; Muscle relaxant; Hydryllin; Osteoporosis medicament (for example diphosphonate, calcitonin and estrogen); Prostaglandin; Antineoplastic agent; The spiritual healing medicament; Tranquilizer; Poison Oak Tree (oak) or black poison wood (sumac) product; Antibody and vaccine.
In certain embodiments, the pharmaceutical composition that comprises the short antisense compounds of targeting ApoB nucleic acid can be reduced therapy in conjunction with lipid gives.In some this embodiment, it is that curative life style changes that lipid reduces therapy.In some this embodiment, it is the LDL-Apheresis that lipid reduces therapy.
In one embodiment, antisense compounds provided herein can be used to reduce the level of the lipoprotein that contains apolipoprotein B among the people experimenter." lipoprotein that contains apolipoprotein B " used herein refers to any lipoprotein with apolipoprotein B as its protein component, it is believed that to comprise LDL, VLDL, IDL and lipoprotein.LDL, VLDL, IDL and lipoprotein contain the apolipoprotein B of a molecule separately, so serum apolipoprotein B measured value can reflect the total quantity of these lipoproteins.Known in this field, each above-mentioned lipoprotein can both cause atheroma.Therefore, one or more in the reduction serum contain the lipoprotein of apolipoprotein B, the treatment benefit are provided can for people experimenter.Little LDL granule it is believed that than big LDL granule more can cause atheroma, therefore reduces little LDL granule and the treatment benefit is provided can for people experimenter.Other lipid parameter also can determine in the experimenter.T-CHOL: HDL than or LDL: the reduction of HDL ratio is to want the improvement than the aspect of the cholesterol that obtains clinically.Also want to reduce the serum triglycerides of the philtrum that shows that lipid level raises equally, clinically.
Other indications of the cardiovascular disease that can measure in the experimenter comprise the serum LDL granular size; Serum LDL cholesteryl ester concentration; The serum LDL cholesteryl ester is formed; The degree of unsaturation of serum LDL cholesteryl ester; With the serum hdl cholesterol levels.The classification of " serum LDL granular size " used herein ester serum LDL granular size, this classification can comprise minimum, little, medium or bulky grain, represents with g/ μ mol usually.In situation of the present invention, " serum LDL cholesteryl ester concentration " means the quantity that the cholesterol that exists in the LDL granule refers to, measures with mg/dL usually.In situation of the present invention, " serum LDL cholesteryl ester composition " is the percentage measurements of exist in the serum LDL granule saturated, single unsaturated and how unsaturated cholesteryl ester fatty acid." many degrees of unsaturation of serum LDL cholesteryl ester " mean the percentage ratio of the how unsaturated cholesteryl ester fatty acid in the serum LDL granule.
Obtain serum or plasma sample for the method for analyzing with prepare blood serum sample so that the method for analysis is well known to a person skilled in the art.With regard to the measurement of lipoprotein, cholesterol, triglyceride and cholesteryl ester, term " serum " and " blood plasma " can be used in this article mutually.
In another embodiment, antisense compounds provided herein can be used to treat metabolic disease.There is multiple biomarker to can be used to assess metabolic disease.For example, blood glucose levels can be by doctor or even patient with the test kit that obtains usually or blood glucose meter (Ascensia ELITE for exampleTMKit, Ascensia (Bayer), Tarrytown NY or Accucheck, Roche Diagnostics) measure.Also can measure (glycated) hemoglobin (HbA of saccharifying1c).HbA1cBe a kind of stable less (minor) haemoglobin variant, the post translational modification of being undertaken by glucose forms in vivo, and it contains the NH of remarkable saccharifying2Terminal β chain.HbA1cBetween level and preceding 3 months average blood glucose level very strong dependency is arranged.Therefore, HbA1cOften be regarded as measuring the blood-glucose control of keeping " goldstandard " (Bunn, H.F.et al., 1978, Science.200,21-7).HbA1cCan measure by ion exchange HPLC or immunoassay; Be used for HbA1cThe family's blood collecting measured and mailing apparatus (kit) can obtain now everywhere.The serum fructosamine is that another that stablize glucose control measured, and can measure (Cobas Integra, Roche Diagnostics) by colorimetric method.
The short antisense compounds of some targeting ApoB nucleic acid
In certain embodiments, lacking the antisense compounds targeting has
The ApoB nucleic acid of the sequence of searching number NM_000384.1 (being incorporated herein) with SEQ ID NO:1.In some this embodiment, short antisense compounds and the SEQ IDNO:1 of targeting SEQ ID NO:1 have at least 90% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:1 of targeting SEQ ID NO:1 have at least 95% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:1 of targeting SEQ ID NO:1 have 100% complementarity.In certain embodiments, the short antisense compounds of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from the nucleotide sequence that table 2 and table 3 provide.
The nucleotide sequence that each SEQ ID NO provides in the table 2 and 3 is independent of any modification to sugar moieties, Dan Julian key or nuclear base.Thus, the defined short antisense compounds of certain SEQ ID NO can comprise one or more to connecting the modification of key or nuclear base between sugar moieties, nucleoside independently.Isis number (Isis NO.) described antisense compounds represented the nuclear base sequence with one or more to connecting key between sugar moieties, nucleoside or examining the combination of the modification of base.
Table 2 and 3 has been enumerated the example of the short antisense compounds of targeting SEQ ID NO:1.Table 2 has been enumerated the short antisense compounds that 100% complementarity is arranged with SEQ ID NO:1.Table 3 has been enumerated the short antisense compounds that has one or two mispairing with respect to SEQ ID NO:1.The file that is marked with " gapmer die body " is represented the pterion of each short antisense compounds-at interval-pterion die body.Spacer segment comprises 2 '-deoxyribonucleotide, and each nucleotide of each pterion section comprises the sugar through 2 '-modification.The concrete sugar through 2 '-modification is also represented in " gapmer die body " file.For example, " 2-10-2 MOE " means 2-10-2 gapmer die body, and wherein the spacer segment flank of 10 2 '-deoxyribonucleotides is connected to the pterion section of 2 nucleotide, and wherein the nucleotide of pterion section is 2 '-MOE nucleotide.Connecting key between nucleoside is thiophosphate.Short antisense compounds comprises the 5-methylcytidine that substitutes not modified cytosine, unless show " not modified cytosine " in the gapmer die body file, represented in this case cytosine is not modified cytosine.For example, " 5-mC is only in the interval " expression spacer segment has the 5-methylcytidine, and the pterion section has not modified cytosine.
Table 2: the short antisense compounds of targeting SEQ ID NO:1
| ISIS No | 5 ' target site | 3 ' target site | Sequence (5 '-3 ') | The Gapmer die body | SEQ ID NO |
| 372816 | 263 | 278 | CCGGAGGTGCTTGAAT | 3-10-3 MOE | 16 |
| 372894 | 264 | 277 | CGGAGGTGCTTGAA | 2-10-2 MOE | 17 |
| 372817 | 428 | 443 | GAAGCCATACACCTCT | 3-10-3 MOE | 18 |
| 372895 | 429 | 442 | AAGCCATACACCTC | 2-10-2 MOE | 19 |
| 372818 | 431 | 446 | GTTGAAGCCATACACC | 3-10-3 MOE | 20 |
| 372896 | 432 | 445 | TTGAAGCCATACAC | 2-10-2 MOE | 21 |
| 372819 | 438 | 453 | CCTCAGGGTTGAAGCC | 3-10-3 MOE | 22 |
| 372897 | 439 | 452 | CTCAGGGTTGAAGC | 2-10-2 MOE | 23 |
| 372820 | 443 | 458 | TTTGCCCTCAGGGTTG | 3-10-3 MOE | 24 |
| 372898 | 444 | 457 | TTGCCCTCAGGGTT | 2-10-2 MOE | 25 |
| 372821 | 468 | 483 | AGTTCTTGGTTTTCTT | 3-10-3 MOE | 26 |
| 372899 | 469 | 482 | GTTCTTGGTTTTCT | 2-10-2 MOE | 27 |
| 372822 | 587 | 602 | CCTCTTGATGTTCAGG | 3-10-3 MOE | 28 |
| 372900 | 588 | 601 | CTCTTGATGTTCAG | 2-10-2 MOE | 29 |
| 372823 | 592 | 607 | ATGCCCCTCTTGATGT | 3-10-3 MOE | 30 |
| 372901 | 593 | 606 | TGCCCCTCTTGATG | 2-10-2 MOE | 31 |
| 346583 | 715 | 728 | TGCCACATTGCCCT | 3-8-3 MOE | 32 |
| 346584 | 716 | 729 | TTGCCACATTGCCC | 3-8-3 MOE | 33 |
| 346585 | 717 | 730 | GTTGCCACATTGCC | 3-8-3 MOE | 34 |
| 346586 | 718 | 731 | TGTTGCCACATTGC | 3-8-3 MOE | 35 |
| 346587 | 719 | 732 | CTGTTGCCACATTG | 3-8-3 MOE | 36 |
| 346588 | 720 | 733 | TCTGTTGCCACATT | 3-8-3 MOE | 37 |
| 346589 | 721 | 734 | TTCTGTTGCCACAT | 3-8-3 MOE | 38 |
| 346590 | 722 | 735 | TTTCTGTTGCCACA | 3-8-3 MOE | 39 |
| 346591 | 723 | 736 | ATTTCTGTTGCCAC | 3-8-3 MOE | 40 |
| 372824 | 929 | 944 | GTAGGAGAAAGGCAGG | 3-10-3 MOE | 41 |
| 372902 | 930 | 943 | TAGGAGAAAGGCAG | 2-10-2 MOE | 42 |
| 372825 | 1256 | 1271 | GGCTTGTAAAGTGATG | 3-10-3 MOE | 43 |
| 372903 | 1257 | 1270 | GCTTGTAAAGTGAT | 2-10-2 MOE | 44 |
| 372826 | 1304 | 1319 | CCACTGGAGGATGTGA | 3-10-3 MOE | 45 |
| 372904 | 1305 | 1318 | CACTGGAGGATGTG | 2-10-2 MOE | 46 |
| 372829 | 2135 | 2150 | TTTCAGCATGCTTTCT | 3-10-3 MOE | 47 |
| 372907 | 2136 | 2149 | TTCAGCATGCTTTC | 2-10-2 MOE | 48 |
| 372832 | 2774 | 2789 | CATATTTGTCACAAAC | 3-10-3 MOE | 49 |
| 372910 | 2775 | 2788 | ATATTTGTCACAAA | 2-10-2 MOE | 50 |
| 372833 | 2779 | 2794 | ATGCCCATATTTGTCA | 3-10-3 MOE | 51 |
| 372911 | 2780 | 2793 | TGCCCATATTTGTC | 2-10-2 MOE | 52 |
| 372835 | 2961 | 2976 | TTTTGGTGGTAGAGAC | 3-10-3 MOE | 53 |
| 372913 | 2962 | 2975 | TTTGGTGGTAGAGA | 2-10-2 MOE | 54 |
| 346592 | 3248 | 3261 | TCTGCTTCGCACCT | 3-8-3 MOE | 55 |
| 346593 | 3249 | 3262 | GTCTGCTTCGCACC | 3-8-3 MOE | 56 |
| 346594 | 3250 | 3263 | AGTCTGCTTCGCAC | 3-8-3 MOE | 57 |
| 346595 | 3251 | 3264 | CAGTCTGCTTCGCA | 3-8-3 MOE | 58 |
| 346596 | 3252 | 3265 | TCAGTCTGCTTCGC | 3-8-3 MOE | 59 |
| 346597 | 3253 | 3266 | CTCAGTCTGCTTCG | 3-8-3 MOE | 60 |
| 346598 | 3254 | 3267 | CCTCAGTCTGCTTC | 3-8-3 MOE | 61 |
| 346599 | 3255 | 3268 | GCCTCAGTCTGCTT | 3-8-3 MOE | 62 |
| 346600 | 3256 | 3269 | AGCCTCAGTCTGCT | 3-8-3 MOE | 63 |
| 372836 | 3350 | 3365 | AACTCTGAGGATTGTT | 3-10-3 MOE | 64 |
| 372914 | 3351 | 3364 | ACTCTGAGGATTGT | 2-10-2 MOE | 65 |
| 372837 | 3355 | 3370 | TCATTAACTCTGAGGA | 3-10-3 MOE | 66 |
| 372915 | 3356 | 3369 | CATTAACTCTGAGG | 2-10-2 MOE | 67 |
| 372838 | 3360 | 3375 | ATTCATCATTAACTCT | 3-10-3 MOE | 68 |
| 372916 | 3361 | 3374 | TTCATCATTAACTC | 2-10-2 MOE | 69 |
| 372839 | 3409 | 3424 | TTGTTCTGAATGTCCA | 3-10-3 MOE | 70 |
| 387461 | 3409 | 3424 | TTGTTCTGAATGTCCA | Cytosine in the 3-10-3 methylene oxygen base BNA interval is not modified | 70 |
| 380147 | 3409 | 3424 | TTGTTCTGAATGTCCA | 3-10-3 methylene oxygen base BNA | 70 |
| 372917 | 3410 | 3423 | TGTTCTGAATGTCC | 2-10-2 MOE | 73 |
| 372840 | 3573 | 3588 | CAGATGAGTCCATTTG | 3-10-3 MOE | 74 |
| 372918 | 3574 | 3587 | AGATGAGTCCATTT | 2-10-2 MOE | 75 |
| 372841 | 3701 | 3716 | ATCCACAGGGAAATTG | 3-10-3 MOE | 76 |
| 372919 | 3702 | 3715 | TCCACAGGGAAATT | 2-10-2 MOE | 77 |
| 372843 | 4219 | 4234 | CAGTTGTACAAGTTGC | 3-10-3 MOE | 78 |
| 372921 | 4220 | 4233 | AGTTGTACAAGTTG | 2-10-2 MOE | 79 |
| 372844 | 4301 | 4316 | CACAGAGTCAGCCTTC | 3-10-3 MOE | 80 |
| 372922 | 4302 | 4315 | ACAGAGTCAGCCTT | 2-10-2 MOE | 81 |
| 372845 | 4308 | 4323 | GGTCAACCACAGAGTC | 3-10-3 MOE | 82 |
| 372923 | 4309 | 4322 | GTCAACCACAGAGT | 2-10-2 MOE | 83 |
| 346601 | 5588 | 5601 | CAGCCACATGCAGC | 3-8-3 MOE | 84 |
| 346602 | 5589 | 5602 | CCAGCCACATGCAG | 3-8-3 MOE | 85 |
| 346603 | 5590 | 5603 | ACCAGCCACATGCA | 3-8-3 MOE | 86 |
| 346604 | 5591 | 5604 | TACCAGCCACATGC | 3-8-3 MOE | 87 |
| 346605 | 5592 | 5605 | TTACCAGCCACATG | 3-8-3 MOE | 88 |
| 346606 | 5593 | 5606 | GTTACCAGCCACAT | 3-8-3 MOE | 89 |
| 346607 | 5594 | 5607 | GGTTACCAGCCACA | 3-8-3 MOE | 90 |
| 346608 | 5595 | 5608 | AGGTTACCAGCCAC | 3-8-3 MOE | 91 |
| 346609 | 5596 | 5609 | TAGGTTACCAGCCA | 3-8-3 MOE | 92 |
| 372851 | 5924 | 5939 | AGGTTCTGCTTTCAAC | 3-10-3 MOE | 93 |
| 372929 | 5925 | 5938 | GGTTCTGCTTTCAA | 2-10-2 MOE | 94 |
| 372854 | 6664 | 6679 | TACTGATCAAATTGTA | 3-10-3 MOE | 95 |
| 372932 | 6665 | 6678 | ACTGATCAAATTGT | 2-10-2 MOE | 96 |
| 372855 | 6908 | 6923 | TTTTTCTTGTATCTGG | 3-10-3 MOE | 97 |
| 372933 | 6909 | 6922 | TTTTCTTGTATCTG | 2-10-2 MOE | 98 |
| 372856 | 7190 | 7205 | ATCCATTAAAACCTGG | 3-10-3 MOE | 99 |
| 372934 | 7191 | 7204 | TCCATTAAAACCTG | 2-10-2 MOE | 100 |
| 372858 | 7817 | 7832 | ATATTGCTCTGCAAAG | 3-10-3 MOE | 101 |
| 372936 | 7818 | 7831 | TATTGCTCTGCAAA | 2-10-2 MOE | 102 |
| 346610 | 7818 | 7831 | TATTGCTCTGCAAA | 3-8-3 MOE | 102 |
| 346611 | 7819 | 7832 | ATATTGCTCTGCAA | 3-8-3 MOE | 104 |
| 346612 | 7820 | 7833 | AATATTGCTCTGCA | 3-8-3 MOE | 105 |
| 346613 | 7821 | 7834 | GAATATTGCTCTGC | 3-8-3 MOE | 106 |
| 346614 | 7822 | 7835 | AGAATATTGCTCTG | 3-8-3 MOE | 107 |
| 346615 | 7823 | 7836 | TAGAATATTGCTCT | 3-8-3 MOE | 108 |
| 346616 | 7824 | 7837 | ATAGAATATTGCTC | 3-8-3 MOE | 109 |
| 346617 | 7825 | 7838 | GATAGAATATTGCT | 3-8-3 MOE | 110 |
| 346618 | 7826 | 7839 | GGATAGAATATTGC | 3-8-3 MOE | 111 |
| 372859 | 7995 | 8010 | ATGGAATCCTCAAATC | 3-10-3 MOE | 112 |
| 372937 | 7996 | 8009 | TGGAATCCTCAAAT | 2-10-2 MOE | 113 |
| 372861 | 8336 | 8351 | GAATTCTGGTATGTGA | 3-10-3 MOE | 114 |
| 372939 | 8337 | 8350 | AATTCTGGTATGTG | 2-10-2 MOE | 115 |
| 372862 | 8341 | 8356 | AGCTGGAATTCTGGTA | 3-10-3 MOE | 116 |
| 372940 | 8342 | 8355 | GCTGGAATTCTGGT | 2-10-2 MOE | 117 |
| 372863 | 8539 | 8554 | TGAAAATCAAAATTGA | 3-10-3 MOE | 118 |
| 372941 | 8540 | 8553 | GAAAATCAAAATTG | 2-10-2 MOE | 119 |
| 372871 | 9344 | 9359 | AAACAGTGCATAGTTA | 3-10-3 MOE | 120 |
| 372949 | 9345 | 9358 | AACAGTGCATAGTT | 2-10-2 MOE | 121 |
| 372872 | 9515 | 9530 | TTCAGGAATTGTTAAA | 3-10-3 MOE | 122 |
| 372950 | 9516 | 9529 | TCAGGAATTGTTAA | 2-10-2 MOE | 123 |
| 372875 | 9794 | 9809 | TTTTGTTTCATTATAG | 3-10-3 MOE | 124 |
| 372953 | 9795 | 9808 | TTTGTTTCATTATA | 2-10-2 MOE | 125 |
| 372877 | 10157 | 10172 | GATGACACTTGATTTA | 3-10-3 MOE | 126 |
| 372955 | 10158 | 10171 | ATGACACTTGATTT | 2-10-2 MOE | 127 |
| 372878 | 10161 | 10176 | GTGTGATGACACTTGA | 3-10-3 MOE | 128 |
| 372956 | 10162 | 10175 | TGTGATGACACTTG | 2-10-2 MOE | 129 |
| 372879 | 10167 | 10182 | TATTCAGTGTGATGAC | 3-10-3 MOE | 130 |
| 372957 | 10168 | 10181 | ATTCAGTGTGATGA | 2-10-2 MOE | 131 |
| 372880 | 10172 | 10187 | ATTGGTATTCAGTGTG | 3-10-3 MOE | 132 |
| 372958 | 10173 | 10186 | TTGGTATTCAGTGT | 2-10-2 MOE | 133 |
| 346619 | 10838 | 10851 | CCTCTAGCTGTAAG | 3-8-3 MOE | 134 |
| 346620 | 10839 | 10852 | CCCTCTAGCTGTAA | 3-8-3 MOE | 135 |
| 346621 | 10840 | 10853 | GCCCTCTAGCTGTA | 3-8-3 MOE | 136 |
| 346622 | 10841 | 10854 | GGCCCTCTAGCTGT | 3-8-3 MOE | 137 |
| 346623 | 10842 | 10855 | AGGCCCTCTAGCTG | 3-8-3 MOE | 138 |
| 346624 | 10843 | 10856 | GAGGCCCTCTAGCT | 3-8-3 MOE | 139 |
| 346625 | 10844 | 10857 | AGAGGCCCTCTAGC | 3-8-3 MOE | 140 |
| 346626 | 10845 | 10858 | AAGAGGCCCTCTAG | 3-8-3 MOE | 141 |
| 346627 | 10846 | 10859 | AAAGAGGCCCTCTA | 3-8-3 MOE | 142 |
| 372890 | 13689 | 13704 | GAATGGACAGGTCAAT | 3-10-3 MOE | 143 |
| 372968 | 13690 | 13703 | AATGGACAGGTCAA | 2-10-2 MOE | 144 |
| 372891 | 13694 | 13709 | GTTTTGAATGGACAGG | 3-10-3 MOE | 145 |
| 372969 | 13695 | 13708 | TTTTGAATGGACAG | 2-10-2 MOE | 146 |
| 372892 | 13699 | 13714 | TGGTAGTTTTGAATGG | 3-10-3 MOE | 147 |
| 372970 | 13700 | 13713 | GGTAGTTTTGAATG | 2-10-2 MOE | 148 |
| 346628 | 13907 | 13920 | TCACTGTATGGTTT | 3-8-3 MOE | 149 |
| 346629 | 13908 | 13921 | CTCACTGTATGGTT | 3-8-3 MOE | 150 |
| 346630 | 13909 | 13922 | GCTCACTGTATGGT | 3-8-3 MOE | 151 |
| 346631 | 13910 | 13923 | GGCTCACTGTATGG | 3-8-3 MOE | 152 |
| 346632 | 13911 | 13924 | TGGCTCACTGTATG | 3-8-3 MOE | 153 |
| 346633 | 13912 | 13925 | CTGGCTCACTGTAT | 3-8-3 MOE | 154 |
| 346634 | 13913 | 13926 | GCTGGCTCACTGTA | 3-8-3 MOE | 155 |
| 346635 | 13914 | 13927 | GGCTGGCTCACTGT | 3-8-3 MOE | 156 |
| 346636 | 13915 | 13928 | AGGCTGGCTCACTG | 3-8-3 MOE | 157 |
| 346637 | 13963 | 13976 | CAGGTCCAGTTCAT | 3-8-3 MOE | 158 |
| 346638 | 13964 | 13977 | GCAGGTCCAGTTCA | 3-8-3 MOE | 159 |
| 346639 | 13965 | 13978 | TGCAGGTCCAGTTC | 3-8-3 MOE | 160 |
| 346640 | 13966 | 13979 | GTGCAGGTCCAGTT | 3-8-3 MOE | 161 |
| 346641 | 13967 | 13980 | GGTGCAGGTCCAGT | 3-8-3 MOE | 162 |
| 346642 | 13968 | 13981 | TGGTGCAGGTCCAG | 3-8-3 MOE | 163 |
| 346643 | 13969 | 13982 | TTGGTGCAGGTCCA | 3-8-3 MOE | 164 |
| 346644 | 13970 | 13983 | TTTGGTGCAGGTCC | 3-8-3 MOE | 165 |
| 346645 | 13971 | 13984 | CTTTGGTGCAGGTC | 3-8-3 MOE | 166 |
| 346646 | 14051 | 14064 | TAACTCAGATCCTG | 3-8-3 MOE | 167 |
| 346647 | 14052 | 14065 | ATAACTCAGATCCT | 3-8-3 MOE | 168 |
| 346648 | 14053 | 14066 | AATAACTCAGATCC | 3-8-3 MOE | 169 |
| 346649 | 14054 | 14067 | AAATAACTCAGATC | 3-8-3 MOE | 170 |
| 346650 | 14055 | 14068 | AAAATAACTCAGAT | 3-8-3 MOE | 171 |
| 346651 | 14056 | 14069 | CAAAATAACTCAGA | 3-8-3 MOE | 172 |
| 346652 | 14057 | 14070 | GCAAAATAACTCAG | 3-8-3 MOE | 173 |
| 346653 | 14058 | 14071 | AGCAAAATAACTCA | 3-8-3 MOE | 174 |
| 346654 | 14059 | 14072 | TAGCAAAATAACTC | 3-8-3 MOE | 175 |
Table 3: targeting SEQ ID NO:1 and have the short antisense compounds of 1 or 2 mispairing
| Isis NO. | 5 ' target site | 3 ' target site | Sequence (5 '-3 ') | The Gapmer die body | SEQ ID NO |
| 372894 | 771 | 784 | CGGAGGTGCTTGAA | 2-10-2 MOE | 17 |
| 372905 | 1111 | 1124 | CAGGGCCTGGAGAG | 2-10-2 MOE | 176 |
| 346628 | 1493 | 1506 | TCACTGTATGGTTT | 3-8-3 MOE | 149 |
| 372828 | 2006 | 2021 | TCTGAAGTCCATGATC | 3-10-3 MOE | 177 |
| 372906 | 2007 | 2020 | CTGAAGTCCATGAT | 2-10-2 MOE | 178 |
| 372830 | 2382 | 2397 | TGGGCATGATTCCATT | 3-10-3 MOE | 179 |
| 372908 | 2383 | 2396 | GGGCATGATTCCAT | 2-10-2 MOE | 180 |
| 346616 | 3162 | 3175 | ATAGAATATTGCTC | 3-8-3 MOE | 109 |
| 346617 | 3163 | 3176 | GATAGAATATTGCT | 3-8-3 MOE | 110 |
| 372929 | 3513 | 3526 | GGTTCTGCTTTCAA | 2-10-2 MOE | 94 |
| 372946 | 3800 | 3813 | TGGAGCCCACGTGC | 2-10-2 MOE | 181 |
| 372904 | 4040 | 4053 | CACTGGAGGATGTG | 2-10-2 MOE | 46 |
| 372842 | 4084 | 4099 | TTGAAGTTGAGGGCTG | 3-10-3 MOE | 182 |
| 372920 | 4085 | 4098 | TGAAGTTGAGGGCT | 2-10-2 MOE | 183 |
| 346586 | 4778 | 4791 | TGTTGCCACATTGC | 3-8-3 MOE | 35 |
| 372847 | 5030 | 5045 | ACCAGTATTAATTTTG | 3-10-3 MOE | 184 |
| 372925 | 5031 | 5044 | CCAGTATTAATTTT | 2-10-2 MOE | 185 |
| 372848 | 5192 | 5207 | GTGTTCTTTGAAGCGG | 3-10-3 MOE | 186 |
| 372926 | 5193 | 5206 | TGTTCTTTGAAGCG | 2-10-2 MOE | 187 |
| 372953 | 5625 | 5638 | TTTGTTTCATTATA | 2-10-2 MOE | 125 |
| 372935 | 7585 | 7598 | AGTTACTTTGGTGT | 2-10-2 MOE | 188 |
| 372860 | 8255 | 8270 | TGGTACATGGAAGTCT | 3-10-3 MOE | 189 |
| 372938 | 8256 | 8269 | GGTACATGGAAGTC | 2-10-2 MOE | 190 |
| 391260 | 8256 | 8269 | GGTACATGGAAGTC | 2-10-2 MOE | 190 |
| 392068 | 8256 | 8269 | GGTACATGGAAGTC | 2-10-2 MOE | 190 |
| 387462 | 8256 | 8269 | GGTACATGGAAGTC | 2-10-2 methylene oxygen base BNA | 190 |
| 391872 | 8256 | 8269 | GGTACATGGAAGTC | Cytosine in 1-1-10-2 2 '-(butyl acetamido)-palmitamide methylene oxygen base BNA/ methylene oxygen base BNA interval is not modified | 190 |
| 380148 | 8256 | 8269 | GGTACATGGAAGTC | 2-10-2 methylene oxygen base BNA | 190 |
| 391871 | 8256 | 8269 | GGTACATGGAAGTC | Cytosine in 1-1-10-2 2 '-(butyl acetamido)-palmitamide/MOE/MOE interval is not modified | 190 |
| 391755 | 8256 | 8269 | GGTACATGGAAGTC | 2-10-2ENA mC is only in the pterion | 190 |
| 398296 | 8256 | 8269 | GGTACATGGAAGTC | 2-10-2 (6 ' S)-6 '-methyl-methylene oxygen base | 190 |
| | | | The BNA cytosine is not modified | |
| 372942 | 8455 | 8468 | TCCATGCCATATGT | 2-10-2 MOE | 200 |
| 372865 | 8888 | 8903 | CCCTGAAGAAGTCCAT | 3-10-3 MOE | 201 |
| 372943 | 8889 | 8902 | CCTGAAGAAGTCCA | 2-10-2 MOE | 202 |
| 372866 | 8908 | 8923 | GCCCAGTTCCATGACC | 3-10-3 MOE | 203 |
| 372944 | 8909 | 8922 | CCCAGTTCCATGAC | 2-10-2 MOE | 204 |
| 372867 | 9058 | 9073 | TTGAGGAAGCCAGATT | 3-10-3 MOE | 205 |
| 372945 | 9059 | 9072 | TGAGGAAGCCAGAT | 2-10-2 MOE | 206 |
| 372870 | 9261 | 9276 | TGGATGCAGTAATCTC | 3-10-3 MOE | 207 |
| 372948 | 9262 | 9275 | GGATGCAGTAATCT | 2-10-2 MOE | 208 |
| 372881 | 10185 | 10200 | TATAAAGTCCAGCATT | 3-10-3 MOE | 209 |
| 372959 | 10186 | 10199 | ATAAAGTCCAGCAT | 2-10-2 MOE | 210 |
| 372882 | 10445 | 10460 | AAGTTCCTGCTTGAAG | 3-10-3 MOE | 211 |
| 372960 | 10446 | 10459 | AGTTCCTGCTTGAA | 2-10-2 MOE | 212 |
| 372964 | 11451 | 11464 | AATGGTGAAGTACT | 2-10-2 MOE | 213 |
| 346612 | 13459 | 13472 | AATATTGCTCTGCA | 3-8-3 MOE | 105 |
| 346613 | 13460 | 13473 | GAATATTGCTCTGC | 3-8-3 MOE | 106 |
In certain embodiments, the target zone is the nucleotide 263-278 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 263-278 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO:16 or 17.In some this embodiment, the short antisense compounds of the nucleotide 263-278 of targeting SEQ ID NO:1 is selected from Isis NO.372816 or 372894.
In certain embodiments, the target zone is the nucleotide 428-483 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 428-483 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 18,19,20,21,22,23,24,25,26 or 27.In some this embodiment, the short antisense compounds of the nucleotide 428-483 of targeting SEQ ID NO:1 is selected from Isis NO.372817,372895,372818,372896,372819,372897,372820,372898,372821 or 372899.
In certain embodiments, the target zone is the nucleotide 428-458 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 428-458 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 18,19,20,21,22,23,24 or 25.In some this embodiment, the short antisense compounds of the nucleotide 428-458 of targeting SEQ ID NO:1 is selected from Isis NO.372817,372895,372818,372896,372819,372897,372820 or 372898.
In certain embodiments, the target zone is the nucleotide 468-483 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 468-483 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 26 or 27.In some this embodiment, the short antisense compounds of the nucleotide 468-483 of targeting SEQ ID NO:1 is selected from Isis NO.372821 or 372899.
In certain embodiments, the target zone is the nucleotide 587-607 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 587-607 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 28,29,30 or 31.In some this embodiment, the short antisense compounds of the nucleotide 587-607 of targeting SEQ ID NO:1 is selected from ISIS NO.372822,372900,372823 or 372901.
In certain embodiments, the target zone is the nucleotide 715-736 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 715-736 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 32,33,34,35,36,37,38,39 or 40.In some this embodiment, the short antisense compounds of the nucleotide 715-736 of targeting SEQ ID NO:1 is selected from Isis NO.346583,346584,346585,346586,346587,346588,346589,346590 or 346591.
In certain embodiments, the target zone is the nucleotide 929-944 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 929-944 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 41 or 42.In some this embodiment, the short antisense compounds of the nucleotide 929-944 of targeting SEQ ID NO:1 is selected from Isis NO.372824 or 372902.
In certain embodiments, the target zone is the nucleotide 1256-1319 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 1256-1319 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 43,44,45 or 46.In some this embodiment, the short antisense compounds of the nucleotide 1256-1319 of targeting SEQ ID NO:1 is selected from Isis NO.372825,372903,372826 or 372904.
In certain embodiments, the target zone is the nucleotide 1256-1271 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 1256-1271 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 43 or 44.In some this embodiment, the short antisense compounds of the nucleotide 1256-1271 of targeting SEQ ID NO:1 is selected from Isis NO.372825 or 372903.
In certain embodiments, the target zone is the nucleotide 1304-1319 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 1304-1319 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 45 or 46.In some this embodiment, the short antisense compounds of the nucleotide 1304-1319 of targeting SEQ ID NO:1 is selected from Isis NO.372826 or 372904.
In certain embodiments, the target zone is the nucleotide 2135-2150 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 2135-2150 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 47 or 48.In some this embodiment, the short antisense compounds of the nucleotide 2135-2150 of targeting SEQ ID NO:1 is selected from ISIS NO.372829 or 372907.
In certain embodiments, the target zone is the nucleotide 2774-2794 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 2774-2794 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 49,50,51 or 52.In some this embodiment, the short antisense compounds of the nucleotide 2774-2794 of targeting SEQ ID NO:1 is selected from ISIS NO.372832,372910,372833 or 372911.
In certain embodiments, the target zone is the nucleotide 2961-2976 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 2961-2976 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 53 or 54.In some this embodiment, the short antisense compounds of the nucleotide 2961-2976 of targeting SEQ ID NO:1 is selected from ISIS NO.372835 or 372913.
In certain embodiments, the target zone is the nucleotide 3248-3269 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 3248-3269 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 55,56,57,58,59,60,61,62 or 63.In some this embodiment, the short antisense compounds of the nucleotide 3248-3269 of targeting SEQID NO:1 is selected from ISIS NO.346592,346593,346594,346595,346596,346597,346598,346599 or 346600.
In certain embodiments, the target zone is the nucleotide 3350-3375 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 3350-3375 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 64,65,66,67,68 or 69.In some this embodiment, the short antisense compounds of the nucleotide 3350-3375 of targeting SEQ ID NO:1 is selected from ISIS NO.372836,372914,372837,372915,372838 or 372916.
In certain embodiments, the target zone is the nucleotide 3409-3424 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 3409-3424 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 70 or 73.In some this embodiment, the short antisense compounds of the nucleotide 3409-3424 of targeting SEQ ID NO:1 is selected from ISIS NO.372839,387461,380147 or 372917.
In certain embodiments, the target zone is the nucleotide 3573-3588 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 3573-3588 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 74 or 75.In some this embodiment, the short antisense compounds of the nucleotide 3573-3588 of targeting SEQ ID NO:1 is selected from ISIS NO.372840 or 372918.
In certain embodiments, the target zone is the nucleotide 3701-3716 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 3701-3716 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 76 or 77.In some this embodiment, the short antisense compounds of the nucleotide 3701-3716 of targeting SEQ ID NO:1 is selected from ISIS NO.372841 or 372919.
In certain embodiments, the target zone is the nucleotide 4219-4234 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 4219-4234 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 78 or 79.In some this embodiment, the short antisense compounds of the nucleotide 4219-4234 of targeting SEQ ID NO:1 is selected from ISIS NO.372843 or 372921.
In certain embodiments, the target zone is the nucleotide 4301-4323 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 4301-4323 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 80,81,82 or 83.In some this embodiment, the short antisense compounds of the nucleotide 4301-4323 of targeting SEQ ID NO:1 is selected from ISIS NO.372844,372922,372845 or 372923.
In certain embodiments, the target zone is the nucleotide 5588-5609 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 5588-5609 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 84,85,86,87,88,89,90,91 or 92.In some this embodiment, the short antisense compounds of the nucleotide 5588-5609 of targeting SEQID NO:1 is selected from ISIS NO.346601,346602,346603,346604,346605,346606,346607,346608 or 346609.
In certain embodiments, the target zone is the nucleotide 5924-5939 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 5924-5939 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 93 or 94.In some this embodiment, the short antisense compounds of the nucleotide 5924-5939 of targeting SEQ ID NO:1 is selected from ISIS NO.372851 or 372929.
In certain embodiments, the target zone is the nucleotide 6664-6679 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 6664-6679 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 95 or 96.In some this embodiment, the short antisense compounds of the nucleotide 6664-6679 of targeting SEQ ID NO:1 is selected from ISIS NO.372854 or 372932.
In certain embodiments, the target zone is the nucleotide 6908-6923 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 6908-6923 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 97 or 98.In some this embodiment, the short antisense compounds of the nucleotide 6908-6923 of targeting SEQ ID NO:1 is selected from ISIS NO.372855 or 372933.
In certain embodiments, the target zone is the nucleotide 7190-7205 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 7190-7205 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 99 or 100.In some this embodiment, the short antisense compounds of the nucleotide 7190-7205 of targeting SEQ ID NO:1 is selected from ISIS NO.372856 or 372934.
In certain embodiments, the target zone is the nucleotide 7817-7839 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 7817-7839 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 101,102,104,105,106,107,108,109,110 or 111.In some this embodiment, the short antisense compounds of the nucleotide 7817-7839 of targeting SEQ ID NO:1 is selected from ISIS NO.372858,372936,346610,346611,346612,346613,346614,346615,346616,346617 or 346618.
In certain embodiments, the target zone is the nucleotide 7995-8010 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 7995-8010 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 112 or 113.In some this embodiment, the short antisense compounds of the nucleotide 7995-8010 of targeting SEQ ID NO:1 is selected from ISIS NO.372859 or 372937.
In certain embodiments, the target zone is the nucleotide 8336-8356 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 8336-8356 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 114,115,116 or 117.In some this embodiment, the short antisense compounds of the nucleotide 8336-8356 of targeting SEQ ID NO:1 is selected from ISIS NO.372861,372939,372862 or 372940.
In certain embodiments, the target zone is the nucleotide 8539-8554 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 8539-8554 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 118 or 119.In some this embodiment, the short antisense compounds of the nucleotide 8539-8554 of targeting SEQ ID NO:1 is selected from ISIS NO.372863 or 372941.
In certain embodiments, the target zone is the nucleotide 9344-9359 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 9344-9359 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 120 or 121.In some this embodiment, the short antisense compounds of the nucleotide 9344-9359 of targeting SEQ ID NO:1 is selected from ISIS NO.372871 or 372949.
In certain embodiments, the target zone is the nucleotide 9515-9530 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 9515-9530 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 122 or 123.In some this embodiment, the short antisense compounds of the nucleotide 9515-9530 of targeting SEQ ID NO:1 is selected from ISIS NO.372872 or 372950.
In certain embodiments, the target zone is the nucleotide 9794-9809 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 9794-9809 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 124 or 125.In some this embodiment, the short antisense compounds of the nucleotide 9794-9809 of targeting SEQ ID NO:1 is selected from ISIS NO.372875 or 372953.
In certain embodiments, the target zone is the nucleotide 10157-10187 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 10157-10187 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 126,127,128,129,130,131,132 or 133.In some this embodiment, the short antisense compounds of the nucleotide 10157-10187 of targeting SEQ ID NO:1 is selected from ISISNO.372877,372955,372878,372956,372879,372957,372880 or 372958.
In certain embodiments, the target zone is the nucleotide 10838-10859 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 10838-10859 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 134,135,136,137,138,139,140,141 or 142.In some this embodiment, the short antisense compounds of the nucleotide 10838-10859 of targeting SEQ ID NO:1 is selected from ISIS NO.346619,346620,346621,346622,346623,346624,346625,346626 or 346627.
In certain embodiments, the target zone is the nucleotide 13689-13714 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 13689-13714 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 143,144,145,146,147 or 148.In some this embodiment, the short antisense compounds of the nucleotide 13689-13714 of targeting SEQ IDNO:1 is selected from ISIS NO.372890,372968,372891,372969,372892 or 372970.
In certain embodiments, the target zone is the nucleotide 13907-13928 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 13907-13928 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 149,150,151,152,153,154,155,156 or 157.In some this embodiment, the short antisense compounds of the nucleotide 13907-13928 of targeting SEQ ID NO:1 is selected from ISIS NO.346628,346629,346630,346631,346632,346633,346634,346635 or 346636.
In certain embodiments, the target zone is the nucleotide 13963-13984 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 13963-13984 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 158,159,160,161,162,163,164,165 or 166.In some this embodiment, the short antisense compounds of the nucleotide 13963-13984 of targeting SEQ ID NO:1 is selected from ISIS NO.346637,346638,346639,346640,346641,346642,346643,346644 or 346645.
In certain embodiments, the target zone is the nucleotide 14051-14072 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 14051-14072 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 167,168,169,170,171,172,173,174 or 175.In some this embodiment, the short antisense compounds of the nucleotide 14051-14072 of targeting SEQ ID NO:1 is selected from ISIS NO.346646,346647,346648,346649,346650,346651,346652,346653 or 346654.
In certain embodiments, its length of short antisense compounds of targeting ApoB nucleic acid is 8-16, preferred 9-15, more preferably 9-14, more preferably 10-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting ApoB nucleic acid is 9-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting ApoB nucleic acid is 10-14 nucleotide.In certain embodiments, this short antisense compounds is short antisense oligonucleotide.
In certain embodiments, the short antisense compounds of targeting ApoB nucleic acid is short gapmer.In some this embodiment, comprise at least one high-affinity in the short gapmer of targeting ApoB nucleic acid one or more pterions therein and modify.In certain embodiments, the short antisense compounds of targeting ApoB nucleic acid comprises 1-3 high-affinity modification in each pterion.In some this embodiment, the nucleoside in pterion or nucleotide comprise 2 ' and modify.In some this embodiment, the monomer in pterion is BNA.In some this embodiment, the monomer in pterion is selected from α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA, β-D-methylene oxygen base (4 '-CH2-O-2 ') BNA, ethyleneoxy group (4 '-(CH2)2-O-2 ') BNA, amino oxygen base (4 '-CH2-O-N (R)-2 ') BNA and oxygen base amino (4 '-CH2-N (R)-O-2 ') BNA.In certain embodiments, the monomer in pterion comprises in 2 ' position and is selected from following substituent group: pi-allyl, amino, azido, thio group, O-pi-allyl, O-C1-C10Alkyl ,-OCF3, O-(CH2)2-O-CH3, 2 '-O (CH2)2SCH3, O-(CH2)2-O-N (Rm) (Rn) or O-CH2-C (=O)-N (Rm) (Rn), each R whereinmAnd RnIndependent is H or substituted or unsubstituted C1-C10Alkyl.In certain embodiments, the monomer in pterion is 2 ' MOE nucleotide.
In certain embodiments, the short antisense compounds of targeting ApoB nucleic acid comprises between 5 ' pterion and 3 ' pterion at interval.In certain embodiments, comprise 5,6,7,8,9,10,11,12,13 or 14 monomers at interval.In certain embodiments, Jian Ge monomer is not modified deoxyribonucleotide.In certain embodiments, Jian Ge monomer is not modified ribonucleotide.In certain embodiments, modify (if any) at interval and cause producing such antisense compounds, when in conjunction with its target nucleic acids, this chemical compound can be supported the cutting of RNA enzyme (including but not limited to RNA enzyme H).
In certain embodiments, the short antisense compounds of targeting ApoB nucleic acid has the same Dan Julian key.In some this embodiment, these keys all are that thiophosphate connects key.In certain embodiments, Lian Jian is that di-phosphate ester connects key.In certain embodiments, the short antisense compounds of targeting ApoB nucleic acid has mixed matrix.
In certain embodiments, its length of short antisense compounds of targeting ApoB nucleic acid is 8 monomers.In certain embodiments, its length of short antisense compounds of targeting ApoB nucleic acid is 9 monomers.In certain embodiments, its length of short antisense compounds of targeting ApoB nucleic acid is 10 monomers.In certain embodiments, its length of short antisense compounds of targeting ApoB nucleic acid is 11 monomers.In certain embodiments, its length of short antisense compounds of targeting ApoB nucleic acid is 12 monomers.In certain embodiments, its length of short antisense compounds of targeting ApoB nucleic acid is 13 monomers.In certain embodiments, its length of short antisense compounds of targeting ApoB nucleic acid is 14 monomers.In certain embodiments, its length of short antisense compounds of targeting ApoB nucleic acid is 15 monomers.In certain embodiments, its length of short antisense compounds of targeting ApoB nucleic acid is 16 monomers.In certain embodiments, the short antisense compounds of targeting ApoB nucleic acid comprises 9-15 monomer.In certain embodiments, the short antisense compounds of targeting ApoB nucleic acid comprises 10-15 monomer.In certain embodiments, the short antisense compounds of targeting ApoB nucleic acid comprises 12-14 monomer.In certain embodiments, the short antisense compounds of targeting ApoB nucleic acid comprises 12-14 nucleotide or nucleoside.
In certain embodiments, the invention provides the method for the expression of regulating ApoB.In certain embodiments, this method comprises the short antisense compounds that uses one or more targeting ApoB nucleic acid, and wherein the short antisense compounds of this targeting ApoB nucleic acid is about 8 to about 16, preferably 9-15, more preferably 9-14, more preferably 10-14 monomer (promptly about 8 monomer to about 16 connections).Those of ordinary skills will appreciate that, this comprises the method that the short antisense compounds that uses one or more 8,9,10,11,12,13,14,15 or 16 monomeric targeting ApoB nucleic acid is regulated the expression of ApoB.
In certain embodiments, the method for adjusting ApoB comprises that using length is the short antisense compounds of 8 monomeric targeting ApoB nucleic acid.In certain embodiments, the method for adjusting ApoB comprises that using length is the short antisense compounds of 9 monomeric targeting ApoB nucleic acid.In certain embodiments, the method for adjusting ApoB comprises that using length is the short antisense compounds of 10 monomeric targeting ApoB nucleic acid.In certain embodiments, the method for adjusting ApoB comprises that using length is the short antisense compounds of 11 monomeric targeting ApoB nucleic acid.In certain embodiments, the method for adjusting ApoB comprises that using length is the short antisense compounds of 12 monomeric targeting ApoB nucleic acid.In certain embodiments, the method for adjusting ApoB comprises that using length is the short antisense compounds of 13 monomeric targeting ApoB nucleic acid.In certain embodiments, the method for adjusting ApoB comprises that using length is the short antisense compounds of 14 monomeric targeting ApoB nucleic acid.In certain embodiments, the method for adjusting ApoB comprises that using length is the short antisense compounds of 15 monomeric targeting ApoB nucleic acid.In certain embodiments, the method for adjusting ApoB comprises that using length is the short antisense compounds of 16 monomeric targeting ApoB nucleic acid.
In certain embodiments, the method for the expression of adjusting ApoB comprises that use comprises the short antisense compounds of 9-15 monomeric targeting ApoB nucleic acid.In certain embodiments, the method for the expression of adjusting ApoB comprises that use comprises the short antisense compounds of 10-15 monomeric targeting ApoB nucleic acid.In certain embodiments, the method for the expression of adjusting ApoB comprises that use comprises the short antisense compounds of 12-14 monomeric targeting ApoB nucleic acid.In certain embodiments, the method for the expression of adjusting ApoB comprises the short antisense compounds that uses the targeting ApoB nucleic acid that comprises 12-14 nucleotide or nucleoside.
In certain embodiments, the short antisense compounds of targeting ApoB nucleic acid can have short antisense compounds characteristic or feature any or that multiple this paper summarized.In certain embodiments, the short antisense compounds of targeting ApoB nucleic acid has and is selected from following die body (pterion-deoxidation interval-pterion): 1-12-1,1-1-10-2,2-10-1-1,3-10-3,2-10-3,2-10-2,1-10-1,1-10-2,3-8-3,2-8-2,1-8-1,3-6-3 or 1-6-1, more preferably 1-10-1,2-10-2,3-10-3 and 1-9-2.
2.SGLT-2
Sodium dependent glucose transport protein 2 (SGLT-2) is expressed in kidney proximal tubule epithelial cell, absorbs glucose again and prevents the effect of loss of glucose in urine thereby play.For the people's gene group, SGLT-2 is a member in the 11 member families of sodium substrate cotransporter.Many these family members enjoy sequence homology, and for example SGLT-1 and SGLT-2 enjoy about 59% sequence homogeneity, enjoy about 70% sequence homogeneity with SGLT-3.SGLT-1 is the glucose transporter that is present among heart and the CNS.SGLT-3 is the sodium channel of experiencing glucose in the small intestinal.The separation station-keeping mode of these SGLTs is a difference part between these homologies family member.(Handlon,A.L.,Expert Opin.Ther.Patents(2005)15(11):1532-1540;Kanai et al.,J.Clin.Invest.,1994,93,397-404;Wellset al.,Am.J.Physiol.Endocrinol.Metab.,1992,263,F459-465)。
To being expelled to studies have shown that of people SGLT2 in Xenopus laevis (Xenopus) oocyte, this albumen mass-energy mediation D-glucose and Alpha-Methyl-D-pyranglucoside (α-MeGlc; A kind of glucalogue) sodium dependency transhipment, wherein the Km value to α-MeGlc is 1.6mM, sodium and glucose coupling ratio are 1: 1 (Kanai et al., J.Clin.Invest., 1994,93,397-404; You et al., J.Biol.Chem., 1995,270,29365-29371).This transport activity is suppressed by phlorhizin, and phlorhizin is a kind of plant glucosides, can be in conjunction with the glucose site of SGLTs but do not transported, thereby suppress the SGLT effect (You et al., J.Biol.Chem., 1995,270,29365-29371).
Diabetes are to be the disease of feature with the hyperglycemia due to the insulin action deficiency.Chronic hyperglycemia is the major risk factors that comprises the diabetes related complication of heart disease, retinopathy, nephropathy and neuropathy.Because kidney plays important effect in the adjusting of plasma glucose levels, the kidney glucose transporter just becoming noticeable drug targets (Wright, Am.J.Physiol.Renal Physiol., 2001,280, F10-18).Diabetic nephropathy is the common cause of the end-stage renal disease that develops in many diabeticss.The glucose toxicity that causes by long-term hyperglycemia can in diabetics, cause organize the dependency insulin resistance (Nawano et al., Am.J.Physiol.Endocrinol.Metab., 2000,278, E535-543).
Definition
" sodium dependent glucose transport protein 2 " is that its expression is treated by lacking gene outcome or the protein that antisense compounds is regulated.Sodium dependent glucose transport protein 2 is commonly referred to SGLT2, but also can be described as SLC5A2; Sodium-glucose transporter 2; Sodium glucose co-transporter 2 is white, the kidney low-affinity; Cotransporter, kidney; Solute carrier family 5 (sodium/glucose transporter), the member 2; SL52.
" SGLT2 nucleic acid " means the nucleic acid of any coding SGLT2.For example, in certain embodiments, SGLT2 nucleic acid include but not limited to the to encode DNA sequence of SGLT2, the RNA sequence of transcribing from the DNA of coding SGLT2 and the mRNA sequence of coding SGLT2." SGLT2mRNA " means the proteic mRNA of coding SGLT2.
The treatment indication
In certain embodiments, lack the expression that antisense compounds is used for regulating SGLT-2 and related protein.In certain embodiments, this adjusting is can include but not limited to that the short antisense compounds of the target nucleic acids molecular hybridization of following material realizes with one or more codings by providing: SGLT2, SL52, SLC5A2, sodium glucose co-transporter 2 is white, kidney low-affinity sodium glucose co-transporter 2 is white, kidney sodium glucose co-transporter 2 white 2 and solute carrier family 5 sodium/glucose transporter member 2.Also provide the method for treatment metabolic disease as herein described and/or cardiovascular disease and disease.In specific embodiment, the short antisense compounds that can suppress the expression of SGLT2 be used for reducing in the method for blood glucose levels of animal and postpone or the method for the outbreak of prevention type ii diabetes in.This method comprises that one or more The compounds of this invention with treatment or prevention effective dose to need to give the animal for the treatment of.These one or more chemical compounds can be the short antisense compounds of the nucleic acid of targeting coding SGLT2.This paper provides the method for the inhibition of the SGLT2 expression that strengthens in kidney cell or the renal tissue, and described method comprises that the short antisense compounds of the nucleic acid that makes this cell or tissue and one or more The compounds of this invention such as targeting coding SGLT2 contacts.
Though described some chemical compound, compositions and method specially according to some embodiment, following example only is a chemical compound in order to demonstrate the invention, and is not intended to and limits these chemical compounds.
In certain embodiments, lacking antisense compounds is the chimeric oligomeric compounds with mix sulphur substituted phosphate and phosphodiester backbone.The short antisense compounds of some mixed matrix has the central authorities interval that comprises at least 5 adjacency 2 '-deoxynucleoside, and this interval flank is connected to two pterions, and each pterion comprises at least 12 '-O-methoxy ethyl nucleoside.In certain embodiments, connecting key between the nucleoside of mixed matrix chemical compound, is that thiophosphate connects key in the interval, is that di-phosphate ester connects key in two pterions.In certain embodiments, the mixed matrix chemical compound has thiophosphate and connects key in the pterion, exception be oligonucleotide 5 ' and 3 ' terminal one or simultaneously two ends have 1 di-phosphate ester to connect key.In certain embodiments, the short antisense compounds of targeting SGLT2 has the 3-10-3 of being selected from, 2-10-3,2-10-2,1-10-1, the die body of 1-10-2,2-8-2,1-9-2,1-8-1,3-6-3 or 1-6-1 (pterion-deoxidation interval-pterion).In certain embodiments, the short antisense compounds of targeting SGLT2 has the die body (pterion-deoxidation interval-pterion) that is selected from 1-10-1,1-10-2,2-8-2,1-9-2,1-8-1,3-6-3 or 1-6-1.
In certain embodiments, targeting SGLT2 nucleic acid and short antisense compounds with mixed matrix effectively are delivered in the kidney.In certain embodiments, the short antisense compounds that gives targeting SGLT2 nucleic acid and have a mixed matrix can cause the target gene in the kidney to express adjusted.In some this embodiment, liver or Toxicity of Kidney are few or do not have.In certain embodiments, targeting SGLT2 nucleic acid and short antisense compounds with mixed matrix with compare except not having the identical short antisense compounds in external other aspects of mixture skeleton, having more usefulness aspect the reduction SGLT-2mRNA, and onset is faster.In some this embodiment, the usefulness of this raising and/or the toxicity of reduction are in mice and/or rat.In some this embodiment, the usefulness of this raising and/or the toxicity of reduction are in the people.
For example and only for purposes of illustration, only comprising thiophosphate and connect the ISIS145733 of key and comprise di-phosphate ester connect key and comprise the ISIS 257016 that thiophosphate connects key in the interval in the pterion, is identical in other respects.The both comprises sequence GAAGTAGCCACCAACTGTGC (SEQ ID NO.1572).These two oligonucleotide also comprise the interval of being made up of 10 2 '-deoxyribonucleotides, and every side joint at interval has 52 '-methoxy ethyl (2 '-MOE) nucleotide.All cytidine residues all are the 5-methylcytidines.Mixed matrix Compound I SIS 257016 compares with non-mixing parent compound ISIS 145733, is having more usefulness (referring to embodiment 9) aspect the reduction SGLT-2mRNA.
Pharmacokinetic to a certain mixed matrix Compound I SIS 257016 shows that in certain embodiments, this chemical compound plays the effect of prodrug, can be metabolised to the pharmacophore of 12 nuclear bases.To studies show that of this short antisense compounds of 12 nuclear bases corresponding to ISIS 257016 of ISIS 370717, this chemical compound has the pharmacological action (pharmacological profile) similar to ISIS 257016, but onset is faster.ISIS 370717 is 12 nuclear base antisense oligonucleotides of targeting SGLT-2, comprises sequence TAGCCACCAACT (SEQ ID NO.1554), also comprises the interval of being made up of 10 2 '-deoxyribonucleotides, and both sides respectively are connected to the pterion of 1 nucleotide at interval.(2 '-MOE) nucleotide is formed by 2 '-methoxy ethyl in the pterion.All cytidine residues all are the 5-methylcytidines.In whole oligonucleotide, connecting key between nucleoside is thiophosphate (P=S).The similarity of the pharmacological activity of ISIS 257016 and ISIS 370717 has been supported this pharmacokinetic result, and promptly ISIS 257016 is the prodrugs (referring to embodiment 10) with 12 nucleotide pharmacophore.In addition, to the great loss of activity that studies show that of stabilisation (end the adds medicated cap) version of ISIS 257016.
In certain embodiments, comprise the monomeric short antisense compounds of 2 ' MOE and be delivered to effectively in the kidney in the pterion, the treatment of carrying out with this chemical compound causes in the kidney target gene expression effectively to be regulated, and does not have liver or Toxicity of Kidney.This paper is proof also further, and in certain embodiments, the parent oligonucleotide of the SGLT-2mRNA in short antisense compounds and targeting mice and the rat is compared, and having more usefulness aspect the SGLT-2mRNA reducing, and onset is faster.This paper confirms that the short at interval aggressiveness (shortmer) of 2 ' MOE can improve usefulness and bioavailability than parent compound.
For example and only for purposes of illustration, the research of ISIS 370717 is disclosed, short antisense compounds is compared with longer parent significantly higher accumulation in renal tissue (about 50 milligrams/gram tissue).In addition, SGLT-2mRNA descends compared with the control above 80% (referring to embodiment 11).ISIS 370717 1-10-1 gapmer are used as the relevant oligonucleotide (sequence related oligos with varying motifs) of sequence that template for preparing has different die bodys.About the research that pterion, interval and total length around the assessment ISIS 370,717 12 mer oligonucleotide change can be referring to embodiment 12.Some evaluated die body comprises 1-10-1,2-8-2,1-8-1,3-6-3 and 1-6-1 (referring to the table 60 among the embodiment 12).Analyzed the effect of chemical compound to the SGLT2mRNA level.All die bodys all suppress SGLT2 expression in the body in the dose dependent mode.Find that 1-10-1,2-8-2 and 1-8-1 gapmer have usefulness especially.Use these die bodys, SGLT-2 mRNA descends compared with the control and surpasses 80%.
In certain embodiments, the invention provides targeting SGLT2 nucleic acid and have the short antisense compounds of the die body that is selected from 1-10-1 and 1-10-2 MOE gapmer.(referring to the table 62 among the embodiment 13).Analyzed of the effect of some this chemical compound to rat SGLT2mRNA.Presentation of results in the table 63,1-10-1 and 1-10-2 MOE gapmer all are to suppress SGLT2 expression in the body in the dose dependent mode, and the decline of SGLT-2mRNA can reach and surpass 80%.
Some other 1-10-1 and 2-8-2MOE gapmer (referring to for example embodiment 14 and 15) in mice and rat body inner model, have also been assessed.Many 1-10-1 and 2-8-2MOEgapmer have realized that under relatively low oligonucleotide concentration SGLT-2mRNA descends above 80%, and without any toxic action.
In another non-limiting example, also analyzed the effect of 388625 couples of Canis familiaris L. SGLT2mRNA of ISIS level.To the research explanation that Canis familiaris L. carries out, can realize that under the dosage of 1mg/kg/wk the expression of SGLT2 is suppressed above 80%.Under high slightly dosage, can realize bigger inhibition.Also confirm in Canis familiaris L., to give ISIS 388625 and improved glucose tolerance.In the glucose tolerance test of standard, to compare with saline control, the peak value plasma glucose levels on average descends and surpasses 50%, and the decline of glucose subsequently weakens (referring to embodiment 17).Equally, compare with the animal of PBS and control treatment, confirm in diabetes rat model, short antisense compounds is passed in time and can significantly be reduced plasma glucose levels and HbA1C (referring to embodiment 16).
Animal in all researchs all further carries out the toxicity assessment.For example, TBW and liver, spleen and kidney weight have been assessed.The significant change of spleen, liver weight or body weight can show that certain specific compound can cause toxic action.Find that all variations are all in the error span scope.In therapeutic process or when research stops, do not observe significant body weight change.Do not observe the significant change of liver or spleen weight.
The short antisense compounds of some targeting SGLT2 nucleic acid
In certain embodiments, lacking the antisense compounds targeting hasThe SGLT2 nucleic acid of the sequence of searching number NM_003041.1 (being incorporated herein) with SEQ ID NO:2.In some this embodiment, short antisense compounds and the SEQID NO:3 of targeting SEQ ID NO:3 have at least 90% complementarity.In some this embodiment, the short antisense compounds of targeting SEQ IDNO:3 and SEQ ID NO:3 have at least 95% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:1 of targeting SEQ ID NO:3 have 100% complementarity.In certain embodiments, the short antisense compounds of targeting SEQ ID NO:3 comprises the nucleotide sequence that is selected from the nucleotide sequence that provides in table 4 and 5.
The nucleotide sequence that each SEQ ID NO provides in the table 4 and 5 is independent of any modification to sugar moieties, Dan Julian key or nuclear base.Thus, the defined short antisense compounds of certain SEQ ID NO can comprise one or more to connecting the modification of key or nuclear base between sugar moieties, nucleoside independently.Isis number (Isis NO.) described antisense compounds represented the nuclear base sequence with one or more to connecting key between sugar moieties, nucleoside or examining the combination of the modification of base.
Table 4 and 5 has been enumerated the example of the short antisense compounds of targeting SEQ ID NO:3.Table 4 has been enumerated the short antisense compounds that 100% complementarity is arranged with SEQ ID NO:3.Table 5 has been enumerated the short antisense compounds that has one or two mispairing with respect to SEQ ID NO:3.The file that is marked with " gapmer die body " is represented the pterion of each short antisense compounds-at interval-pterion die body.Spacer segment comprises 2 '-deoxyribonucleotide, and each nucleotide of each pterion section comprises the sugar through 2 '-modification.The concrete sugar through 2 '-modification is also represented in " gapmer die body " file.For example, " 2-10-2 MOE " means 2-10-2 gapmer die body, and wherein the spacer segment flank of 10 2 '-deoxyribonucleotides is connected to the pterion section of 2 nucleotide, and wherein the nucleotide of pterion section is 2 '-MOE nucleotide.Connecting key between nucleoside is thiophosphate.Short antisense compounds comprises the 5-methylcytidine that substitutes not modified cytosine, unless show " not modified cytosine " in the gapmer die body file, represented in this case cytosine is not modified cytosine.For example, " 5-mC is only in the interval " expression spacer segment has the 5-methylcytidine, and the pterion section has not modified cytosine.
Table 4: the short antisense compounds of targeting SEQ ID NO:3
| ISIS No | 5 ' target site | 3 ' target site | Sequence (5 '-3 ') | The Gapmer die body | SEQ ID NO |
| 379684 | 84 | 95 | TGTCAGCAGGAT | 1-10-1 MOE | 214 |
| 405193 | 113 | 124 | CAGCAGGAAATA | 2-8-2 MOE | 215 |
| 405194 | 114 | 125 | CCAGCAGGAAAT | 2-8-2 MOE | 216 |
| 405195 | 115 | 126 | ACCAGCAGGAAA | 2-8-2 MOE | 217 |
| 405196 | 116 | 127 | GACCAGCAGGAA | 2-8-2 MOE | 218 |
| 405197 | 117 | 128 | TGACCAGCAGGA | 2-8-2 MOE | 219 |
| 379685 | 117 | 128 | TGACCAGCAGGA | 1-10-1 MOE | 219 |
| 405198 | 118 | 129 | ATGACCAGCAGG | 2-8-2 MOE | 221 |
| 405199 | 119 | 130 | AATGACCAGCAG | 2-8-2 MOE | 222 |
| 405200 | 120 | 131 | CAATGACCAGCA | 2-8-2 MOE | 223 |
| 405201 | 121 | 132 | CCAATGACCAGC | 2-8-2 MOE | 224 |
| 379686 | 135 | 146 | ACCACAAGCCAA | 1-10-1 MOE | 225 |
| 379711 | 172 | 183 | TAGCCGCCCACA | 1-10-1 MOE | 226 |
| 388628 | 172 | 183 | TAGCCGCCCACA | 2-8-2 MOE | 226 |
| 405202 | 207 | 218 | CCGGCCACCACA | 2-8-2 MOE | 228 |
| 405203 | 208 | 219 | ACCGGCCACCAC | 2-8-2 MOE | 229 |
| 405204 | 236 | 247 | GATGTTGCTGGC | 2-8-2 MOE | 230 |
| 379687 | 236 | 247 | GATGTTGCTGGC | 1-10-1 MOE | 230 |
| 405205 | 237 | 248 | CGATGTTGCTGG | 2-8-2 MOE | 232 |
| 405206 | 238 | 249 | CCGATGTTGCTG | 2-8-2 MOE | 233 |
| 405207 | 239 | 250 | GCCGATGTTGCT | 2-8-2 MOE | 234 |
| 405208 | 240 | 251 | TGCCGATGTTGC | 2-8-2 MOE | 235 |
| 405209 | 241 | 252 | CTGCCGATGTTG | 2-8-2 MOE | 236 |
| 405210 | 260 | 271 | CAGGCCCACAAA | 2-8-2 MOE | 237 |
| 405211 | 261 | 272 | CCAGGCCCACAA | 2-8-2 MOE | 238 |
| 405212 | 262 | 273 | GCCAGGCCCACA | 2-8-2 MOE | 239 |
| 379688 | 288 | 299 | CCAAGCCACTTG | 1-10-1 MOE | 240 |
| 379689 | 318 | 329 | AGAGCGCATTCC | 1-10-1 MOE | 241 |
| 379690 | 435 | 446 | ACAGGTAGAGGC | 1-10-1 MOE | 242 |
| 405248 | 474 | 485 | AGATCTTGGTGA | 2-8-2 MOE | 243 |
| 379691 | 474 | 485 | AGATCTTGGTGA | 1-10-1 MOE | 243 |
| 382676 | 527 | 539 | TGTTCCAGCCCAG | 1-10-2 MOE | 245 |
| 388625 | 528 | 539 | TGTTCCAGCCCA | 2-8-2 MOE | 246 |
| 389780 | 528 | 539 | TGTTCCAGCCCA | 1-9-2 MOE | 246 |
| 379692 | 528 | 539 | TGTTCCAGCCCA | 1-10-1 MOE | 246 |
| 392170 | 528 | 539 | TGTTCCAGCCCA | 1-10-1 methylene oxygen base BNA | 246 |
| 392173 | 528 | 539 | TGTTCCAGCCCA | 2-8-2 methylene oxygen base BNA | 246 |
| 405213 | 529 | 540 | ATGTTCCAGCCC | 2-8-2 MOE | 251 |
| 405214 | 564 | 575 | TGGTGATGCCCA | 2-8-2 MOE | 252 |
| 405215 | 565 | 576 | ATGGTGATGCCC | 2-8-2 MOE | 253 |
| 405216 | 566 | 577 | CATGGTGATGCC | 2-8-2 MOE | 254 |
| 379693 | 566 | 577 | CATGGTGATGCC | 1-10-1 MOE | 254 |
| 405217 | 567 | 578 | TCATGGTGATGC | 2-8-2 MOE | 256 |
| 405218 | 568 | 579 | ATCATGGTGATG | 2-8-2 MOE | 257 |
| 405219 | 587 | 598 | CCCTCCTGTCAC | 2-8-2 MOE | 258 |
| 405220 | 588 | 599 | GCCCTCCTGTCA | 2-8-2 MOE | 259 |
| 405221 | 589 | 600 | AGCCCTCCTGTC | 2-8-2 MOE | 260 |
| 405222 | 590 | 601 | CAGCCCTCCTGT | 2-8-2 MOE | 261 |
| 405223 | 591 | 602 | CCAGCCCTCCTG | 2-8-2 MOE | 262 |
| 405224 | 592 | 603 | GCCAGCCCTCCT | 2-8-2 MOE | 263 |
| 379694 | 629 | 640 | GACGAAGGTCTG | 1-10-1 MOE | 264 |
| 405225 | 707 | 718 | GTATTTGTCGAA | 2-8-2 MOE | 265 |
| 379695 | 737 | 748 | GGACACCGTCAG | 1-10-1 MOE | 266 |
| 379696 | 974 | 985 | CAGCTTCAGGTA | 1-10-1 MOE | 267 |
| 405226 | 998 | 1009 | CATGACCATGAG | 2-8-2 MOE | 268 |
| 405227 | 999 | 1010 | GCATGACCATGA | 2-8-2 MOE | 269 |
| 405228 | 1000 | 1011 | GGCATGACCATG | 2-8-2 MOE | 270 |
| 405229 | 1001 | 1012 | TGGCATGACCAT | 2-8-2 MOE | 271 |
| 405230 | 1002 | 1013 | CTGGCATGACCA | 2-8-2 MOE | 272 |
| 379697 | 1002 | 1013 | CTGGCATGACCA | 1-10-1 MOE | 272 |
| 405231 | 1003 | 1014 | CCTGGCATGACC | 2-8-2 MOE | 274 |
| 379698 | 1091 | 1102 | GCAGCCCACCTC | 1-10-1 MOE | 275 |
| 405232 | 1092 | 1103 | AGCAGCCCACCT | 2-8-2 MOE | 276 |
| 405233 | 1093 | 1104 | GAGCAGCCCACC | 2-8-2 MOE | 277 |
| 405234 | 1130 | 1141 | CATGAGCTTCAC | 2-8-2 MOE | 278 |
| 405235 | 1131 | 1142 | GCATGAGCTTCA | 2-8-2 MOE | 279 |
| 382677 | 1131 | 1143 | GGCATGAGCTTCA | 1-10-2 MOE | 280 |
| 388626 | 1132 | 1143 | GGCATGAGCTTC | 2-8-2 MOE | 281 |
| 379699 | 1132 | 1143 | GGCATGAGCTTC | 1-10-1 MOE | 281 |
| 405236 | 1133 | 1144 | GGGCATGAGCTT | 2-8-2 MOE | 283 |
| 405237 | 1157 | 1168 | CAGCATGAGTCC | 2-8-2 MOE | 284 |
| 405238 | 1158 | 1169 | CCAGCATGAGTC | 2-8-2 MOE | 285 |
| 379700 | 1158 | 1169 | CCAGCATGAGTC | 1-10-1 MOE | 285 |
| 405239 | 1159 | 1170 | GCCAGCATGAGT | 2-8-2 MOE | 287 |
| 379701 | 1230 | 1241 | CCATGGTGAAGA | 1-10-1 MOE | 288 |
| 405240 | 1542 | 1553 | CACAGCTGCCCG | 2-8-2 MOE | 289 |
| 405241 | 1543 | 1554 | ACACAGCTGCCC | 2-8-2 MOE | 290 |
| 405242 | 1544 | 1555 | CACACAGCTGCC | 2-8-2 MOE | 291 |
| 382678 | 1544 | 1556 | GCACACAGCTGCC | 1-10-2 MOE | 292 |
| 388627 | 1545 | 1556 | GCACACAGCTGC | 2-8-2 MOE | 293 |
| 379702 | 1545 | 1556 | GCACACAGCTGC | 1-10-1 MOE | 293 |
| 379703 | 1701 | 1712 | GCCGGAGACTGA | 1-10-1 MOE | 295 |
| 405243 | 1976 | 1987 | ATTGAGGTTGAC | 2-8-2 MOE | 296 |
| 405244 | 1977 | 1988 | CATTGAGGTTGA | 2-8-2 MOE | 297 |
| 405245 | 1978 | 1989 | GCATTGAGGTTG | 2-8-2 MOE | 298 |
| 405246 | 1979 | 1990 | GGCATTGAGGTT | 2-8-2 MOE | 299 |
| 405247 | 1980 | 1991 | GGGCATTGAGGT | 2-8-2 MOE | 300 |
Table 5: targeting SEQ ID NO:3 and have the short antisense compounds of 1 or 2 mispairing
| ISIS No | 5 ' target site | 3 ' target site | Sequence (5 '-3 ') | The Gapmer die body | SEQ ID NO |
| 405200 | 96 | 107 | CAATGACCAGCA | 2-8-2 MOE | 223 |
| 405215 | 382 | 393 | ATGGTGATGCCC | 2-8-2 MOE | 253 |
| 405216 | 383 | 394 | CATGGTGATGCC | 2-8-2 MOE | 254 |
| 379693 | 383 | 394 | CATGGTGATGCC | 1-10-1 MOE | 254 |
| 379701 | 471 | 482 | CCATGGTGAAGA | 1-10-1 MOE | 288 |
| 405218 | 472 | 483 | ATCATGGTGATG | 2-8-2 MOE | 257 |
| 405246 | 536 | 547 | GGCATTGAGGTT | 2-8-2 MOE | 299 |
| 405248 | 570 | 581 | AGATCTTGGTGA | 2-8-2 MOE | 243 |
| 379691 | 570 | 581 | AGATCTTGGTGA | 1-10-1 MOE | 243 |
| 379698 | 683 | 694 | GCAGCCCACCTC | 1-10-1 MOE | 275 |
| 405232 | 684 | 695 | AGCAGCCCACCT | 2-8-2 MOE | 276 |
| 379711 | 685 | 696 | TAGCCGCCCACA | 1-10-1 MOE | 226 |
| 388628 | 685 | 696 | TAGCCGCCCACA | 2-8-2 MOE | 226 |
| 379698 | 950 | 961 | GCAGCCCACCTC | 1-10-1 MOE | 275 |
| 405232 | 951 | 962 | AGCAGCCCACCT | 2-8-2 MOE | 276 |
| 405235 | 978 | 989 | GCATGAGCTTCA | 2-8-2 MOE | 279 |
| 382677 | 978 | 990 | GGCATGAGCTTCA | 1-10-2 MOE | 280 |
| 388626 | 979 | 990 | GGCATGAGCTTC | 2-8-2 MOE | 281 |
| 379699 | 979 | 990 | GGCATGAGCTTC | 1-10-1 MOE | 281 |
| 405236 | 980 | 991 | GGGCATGAGCTT | 2-8-2 MOE | 283 |
| 379698 | 1043 | 1054 | GCAGCCCACCTC | 1-10-1 MOE | 275 |
| 405239 | 1171 | 1182 | GCCAGCATGAGT | 2-8-2 MOE | 287 |
| 405209 | 1213 | 1224 | CTGCCGATGTTG | 2-8-2 MOE | 236 |
| 405233 | 1364 | 1375 | GAGCAGCCCACC | 2-8-2 MOE | 277 |
| 405240 | 1366 | 1377 | CACAGCTGCCCG | 2-8-2 MOE | 289 |
| 405211 | 1500 | 1511 | CCAGGCCCACAA | 2-8-2 MOE | 238 |
| 405212 | 1501 | 1512 | GCCAGGCCCACA | 2-8-2 MOE | 239 |
| 379695 | 1643 | 1654 | GGACACCGTCAG | 1-10-1 MOE | 266 |
| 379698 | 1875 | 1886 | GCAGCCCACCTC | 1-10-1 MOE | 275 |
| 405239 | 1993 | 2004 | GCCAGCATGAGT | 2-8-2 MOE | 287 |
| 405211 | 2210 | 2221 | CCAGGCCCACAA | 2-8-2 MOE | 238 |
| 405212 | 2211 | 2222 | GCCAGGCCCACA | 2-8-2 MOE | 239 |
In certain embodiments, the target zone is the nucleotide 85-184 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 85-184 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 85-184 comprises the nucleotide sequence that is selected from SEQ ID NO 214,215,216,217,218,219,221,222,223,224,225 or 227.In some this embodiment, the short antisense compounds of the nucleotide 85-184 of targeting SEQ ID NO:3 is selected from Isis No 379684,405193,405194,405195,405196,405197,379685,405198,405199,405200,405201,379686,379711 or 388628.
In certain embodiments, the target zone is the nucleotide 113-132 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 113-132 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 113-132 comprises the nucleotide sequence that is selected from SEQ ID NO 215,216,217,218,219,221,222,223 or 224.In some this embodiment, the short antisense compounds of the nucleotide 113-132 of targeting SEQ ID NO:3 is selected from Isis No 405193,405194,405195,405196,405197,379685,405198,405199,405200 or 405201.
In certain embodiments, the target zone is the nucleotide 207-329 of SEQ ID NO:3.3. lack in certain embodiments, the nucleotide 207-329 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 207-329 comprises the nucleotide sequence that is selected from SEQ ID NO 228,229,230,232,233,234,235,236,237,238,239,240 or 241.In some this embodiment, the short antisense compounds of the nucleotide 207-329 of targeting SEQ ID NO:3 is selected from Isis No405202,405203,405204,379687,405205,405206,405207,405208,405209,405210,405211,405212,379688 or 379689.
In certain embodiments, the target zone is the nucleotide 207-273 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 207-273 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 207-273 comprises the nucleotide sequence that is selected from SEQ IDNO 228,229,230,232,233,234,235,236,237,238 or 239.In some this embodiment, the short antisense compounds of the nucleotide 207-273 of targeting SEQ IDNO:3 is selected from Isis No 405202,405203,405204,379687,405205,405206,405207,405208,405209,405210,405211 or 405212.
In certain embodiments, the target zone is the nucleotide 207-219 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 207-219 of antisense compounds targeting SEQ ID NO:3.3. in some this embodiment, the short antisense compounds of targeted nucleotide 207-219 comprises the nucleotide sequence that is selected from SEQ ID NO 228 or 229.In some this embodiment, the short antisense compounds of the nucleotide 207-219 of targeting SEQ ID NO:3 is selected from Isis NO..405202 or 405203.
In certain embodiments, the target zone is the nucleotide 236-252 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 236-252 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 236-252 comprises the nucleotide sequence that is selected from SEQ ID NO 230,232,233,234,235 or 236.In some this embodiment, the short antisense compounds of the nucleotide 236-252 of targeting SEQ ID NO:3 is selected from Isis NO.405204,379687,405205,405206,405207,405208 or 405209.
In certain embodiments, the target zone is the nucleotide 260-273 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 260-273 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 260-273 comprises the nucleotide sequence that is selected from SEQ ID NO 237,238 or 239.In some this embodiment, the short antisense compounds of the nucleotide 260-273 of targeting SEQ ID NO:3 is selected from Isis NO.405210,405211 or 405212.
In certain embodiments, the target zone is the nucleotide 435-640 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 435-640 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 435-640 comprises the nucleotide sequence that is selected from SEQ ID NO 242,243,245,246,251,252,253,254,256,257,258,259,260,261,262,263 or 264.In some this embodiment, the short antisense compounds of the nucleotide 435-640 of targeting SEQ ID NO:3 is selected from Isis NO.379690,405248,379691,389780,379692,382676,388625,392170,392173,405213,405214,405215,405216,379693,405217,405218,405219,405220,405221,405222,405223,405224 or 379694.
In certain embodiments, the target zone is the nucleotide 527-540 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 527-540 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 527-540 comprises the nucleotide sequence that is selected from SEQ ID NO 245,246 or 251.In some this embodiment, the short antisense compounds of the nucleotide 527-540 of targeting SEQ ID NO:3 is selected from Isis NO.389780,379692,382676,388626,392170,392173 or 405213.
In certain embodiments, the target zone is the nucleotide 564-603 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 564-603 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 564-603 comprises the nucleotide sequence that is selected from SEQ ID NO 252,253,254,256,257,258,259,260,261,262 or 263.In some this embodiment, the short antisense compounds of the nucleotide 564-603 of targeting SEQ IDNO:3 is selected from Isis NO.405214,405215,405216,379693,405217,405218,405219,405220,405221,405222,405223 or 405224.
In certain embodiments, the target zone is the nucleotide 564-579 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 564-579 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 564-579 comprises the nucleotide sequence that is selected from SEQ ID NO 252,253,254,256 or 257.In some this embodiment, the short antisense compounds of the nucleotide 564-579 of targeting SEQ ID NO:3 is selected from Isis NO.405214,405215,405216,379693,405217 or 405218.
In certain embodiments, the target zone is the nucleotide 587-603 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 587-603 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 587-603 comprises the nucleotide sequence that is selected from SEQ ID NO 258,259,260,261,262 or 263.In some this embodiment, the short antisense compounds of the nucleotide 587-603 of targeting SEQ ID NO:3 is selected from Isis NO.405219,405220,405221,405222,405223 or 405224.
In certain embodiments, the target zone is the nucleotide 974-1014 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 974-1014 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 974-1014 comprises the nucleotide sequence that is selected from SEQ ID NO 267,268,269,270,271,272 or 274.In some this embodiment, the short antisense compounds of the nucleotide 974-1014 of targeting SEQ ID NO:3 is selected from Isis NO.379696,405226,405227,405228,405229,405230,379697 or 405231.
In certain embodiments, the target zone is the nucleotide 998-1014 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 998-1014 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 998-1014 comprises the nucleotide sequence that is selected from SEQ ID NO 268,269,270,271,272 or 274.In some this embodiment, the short antisense compounds of the nucleotide 998-1014 of targeting SEQ ID NO:3 is selected from Isis NO.405226,405227,405228,405229,405230,379697 or 405231.
In certain embodiments, the target zone is the nucleotide 1091-1170 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 1091-1170 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 1091-1170 comprises the nucleotide sequence that is selected from SEQ ID NO 275,276,277,278,279,280,281,283,284,285,286 or 287.In some this embodiment, the short antisense compounds of the nucleotide 1091-1170 of targeting SEQ ID NO:3 is selected from Isis NO.379698,405232,405233,405234,405235,388626,379699,382677,405236,405237,405238,379700 or 405239.
In certain embodiments, the target zone is the nucleotide 1091-1104 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 1091-1104 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 1091-1104 comprises the nucleotide sequence that is selected from SEQ ID NO 275,276 or 277.In some this embodiment, the short antisense compounds of the nucleotide 1091-1104 of targeting SEQ ID NO:3 is selected from Isis NO.379698,405232 or 405233.
In certain embodiments, the target zone is the nucleotide 1130-1144 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 1130-1144 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 1130-1144 comprises the nucleotide sequence that is selected from SEQ ID NO 278,279,280,281 or 283.In some this embodiment, the short antisense compounds of the nucleotide 1130-1144 of targeting SEQ ID NO:3 is selected from Isis NO.405234,405235,388626,379699,382677 or 405236.
In certain embodiments, the target zone is the nucleotide 1157-1170 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 1157-1170 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 1157-1170 comprises the nucleotide sequence that is selected from SEQ ID NO 284,285 or 287.In some this embodiment, the short antisense compounds of the nucleotide 1157-1170 of targeting SEQ ID NO:3 is selected from Isis NO.405237,405238,379700 or 405239.
In certain embodiments, the target zone is the nucleotide 1542-1556 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 1542-1556 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 1542-1556 comprises the nucleotide sequence that is selected from SEQ ID NO 289,290,291,292 or 293.In some this embodiment, the short antisense compounds of the nucleotide 1542-1556 of targeting SEQ ID NO:3 is selected from Isis NO.405240,405241,405242,388629,379702 or 382678.
In certain embodiments, the target zone is the nucleotide 1976-1991 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 1976-1991 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 1976-1991 comprises the nucleotide sequence that is selected from SEQ ID NO 296,297,298,299 or 300.In some this embodiment, the short antisense compounds of the nucleotide 1976-1991 of targeting SEQ ID NO:3 is selected from Isis NO.405243,405244,405245,405246 or 405247.
In certain embodiments, its length of short antisense compounds of targeting SGLT2 nucleic acid is 8-16, preferred 9-15, more preferably 9-14, more preferably 10-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting SGLT2 nucleic acid is 9-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting SGLT2 nucleic acid is 10-14 nucleotide.In certain embodiments, this short antisense compounds is short antisense oligonucleotide.
In certain embodiments, the short antisense compounds of targeting SGLT2 nucleic acid is short gapmer.In some this embodiment, comprise at least one high-affinity in one or more pterions of the short gapmer of targeting SGLT2 nucleic acid in chemical compound and modify.In certain embodiments, the short antisense compounds of targeting SGLT2 nucleic acid comprises 1-3 high-affinity modification in each pterion.In some this embodiment, the nucleoside in pterion or nucleotide comprise 2 ' and modify.In some this embodiment, the monomer in pterion is BNA.In some this embodiment, the monomer in pterion is selected from α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA, β-D-methylene oxygen base (4 '-CH2-O-2 ') BNA, ethyleneoxy group (4 '-(CH2)2-O-2 ') BNA, amino oxygen base (4 '-CH2-O-N (R)-2 ') BNA and oxygen base amino (4 '-CH2-N (R)-O-2 ') BNA.In certain embodiments, the monomer in pterion comprises in 2 ' position and is selected from following substituent group: pi-allyl, amino, azido, thio group, O-pi-allyl, O-C1-C10Alkyl ,-OCF3, O-(CH2)2-O-CH3, 2 '-O (CH2)2SCH3, O-(CH2)2-O-N (Rm) (Rn) and O-CH2-C (=O)-N (Rm) (Rn), each R whereinmAnd RnIndependent is H or substituted or unsubstituted C1-C10Alkyl.In certain embodiments, the monomer in pterion is 2 ' MOE nucleotide.
In certain embodiments, the short antisense compounds of targeting SGLT2 nucleic acid comprises between 5 ' pterion and 3 ' pterion at interval.In certain embodiments, comprise 5,6,7,8,9,10,11,12,13 or 14 monomers at interval.In certain embodiments, Jian Ge monomer is not modified deoxyribonucleotide.In certain embodiments, Jian Ge monomer is not modified ribonucleotide.In certain embodiments, modify (if any) at interval and cause producing such antisense compounds, when in conjunction with its target nucleic acids, this chemical compound can be supported the cutting of RNA enzyme (including but not limited to RNA enzyme H).
In certain embodiments, the short antisense compounds of targeting SGLT2 nucleic acid has the same Dan Julian key.In some this embodiment, these keys all are that thiophosphate connects key.In certain embodiments, Lian Jian is that di-phosphate ester connects key.In certain embodiments, the short antisense compounds of targeting SGLT2 nucleic acid has mixed matrix.
In certain embodiments, its length of short antisense compounds of targeting SGLT2 nucleic acid is 8 monomers.In certain embodiments, its length of short antisense compounds of targeting SGLT2 nucleic acid is 9 monomers.In certain embodiments, its length of short antisense compounds of targeting SGLT2 nucleic acid is 10 monomers.In certain embodiments, its length of short antisense compounds of targeting SGLT2 nucleic acid is 11 monomers.In certain embodiments, its length of short antisense compounds of targeting SGLT2 nucleic acid is 12 monomers.In certain embodiments, its length of short antisense compounds of targeting SGLT2 nucleic acid is 13 monomers.In certain embodiments, its length of short antisense compounds of targeting SGLT2 nucleic acid is 14 monomers.In certain embodiments, its length of short antisense compounds of targeting SGLT2 nucleic acid is 15 monomers.In certain embodiments, its length of short antisense compounds of targeting SGLT2 nucleic acid is 16 monomers.
In certain embodiments, the short antisense compounds of targeting SGLT2 nucleic acid comprises 9-15 monomer.In certain embodiments, the short antisense compounds of targeting SGLT2 nucleic acid comprises 10-15 monomer.In certain embodiments, the short antisense compounds of targeting SGLT2 nucleic acid comprises 12-14 monomer.In certain embodiments, the short antisense compounds of targeting SGLT2 nucleic acid comprises 12-14 nucleotide or nucleoside.
In certain embodiments, the invention provides the method for the expression of regulating SGLT2.In certain embodiments, this method comprises the short antisense compounds that uses one or more targeting SGLT2 nucleic acid, and wherein the short antisense compounds of this targeting SGLT2 nucleic acid is about 8 to about 16, preferably 9-15, more preferably 9-14, more preferably 10-14 monomer (promptly about 8 monomer to about 16 connections).Those of ordinary skills will appreciate that, this comprises the method that the short antisense compounds that uses one or more 8,9,10,11,12,13,14,15 or 16 monomeric targeting SGLT2 nucleic acid is regulated the expression of SGLT2.
In certain embodiments, the method for adjusting SGLT2 comprises that using length is the short antisense compounds of 8 monomeric targeting SGLT2 nucleic acid.In certain embodiments, the method for adjusting SGLT2 comprises that using length is the short antisense compounds of 9 monomeric targeting SGLT2 nucleic acid.In certain embodiments, the method for adjusting SGLT2 comprises that using length is the short antisense compounds of 10 monomeric targeting SGLT2 nucleic acid.In certain embodiments, the method for adjusting SGLT2 comprises that using length is the short antisense compounds of 11 monomeric targeting SGLT2 nucleic acid.In certain embodiments, the method for adjusting SGLT2 comprises that using length is the short antisense compounds of 12 monomeric targeting SGLT2 nucleic acid.In certain embodiments, the method for adjusting SGLT2 comprises that using length is the short antisense compounds of 13 monomeric targeting SGLT2 nucleic acid.In certain embodiments, the method for adjusting SGLT2 comprises that using length is the short antisense compounds of 14 monomeric targeting SGLT2 nucleic acid.In certain embodiments, the method for adjusting SGLT2 comprises that using length is the short antisense compounds of 15 monomeric targeting SGLT2 nucleic acid.In certain embodiments, the method for adjusting SGLT2 comprises that using length is the short antisense compounds of 16 monomeric targeting SGLT2 nucleic acid.
In certain embodiments, the method for the expression of adjusting SGLT2 comprises that use comprises the short antisense compounds of 9-15 monomeric targeting SGLT2 nucleic acid.In certain embodiments, the method for the expression of adjusting SGLT2 comprises that use comprises the short antisense compounds of 10-15 monomeric targeting SGLT2 nucleic acid.In certain embodiments, the method for the expression of adjusting SGLT2 comprises that use comprises the short antisense compounds of 12-14 monomeric targeting SGLT2 nucleic acid.In certain embodiments, the method for the expression of adjusting SGLT2 comprises the short antisense compounds that uses the targeting SGLT2 nucleic acid that comprises 12-14 nucleotide or nucleoside.
3.PCSK9
To suffer from the high LDL-C level in the individuality of autosomal dominant hypercholesterolemia (ADH), with the coding LDL-receptor (LDL-R), apolipoprotein B (apoB) or crude protein (proprotein) invertase subtilisin/kexin type 9 (PCSK9) gene in sudden change associate (Abifadel et al., Nat.Genet., 2003,34:154-156).Obtain function mutation (gain-of-function mutation) when relevant with high LDL-C level in finding PCSK9, PCSK9 is accredited as three locus relevant with ADH.The interior assembling of born of the same parents and the secretion of the lipoprotein of triglyceride are rich in the ApoB participation, and are the parts of LDL-R.PCSK9 is considered to reduce the LDL-R expression in the liver.The liver picked-up that contains the ApoB lipoprotein during the reduction that LDL-R expresses causes circulating reduces, and this causes cholesterol to raise.
Definition
" PCSK9 " is that its expression is treated by lacking gene outcome or the protein that antisense compounds is regulated.
" PCSK9 nucleic acid " means the nucleic acid of any coding PCSK9.For example, in certain embodiments, PCSK9 nucleic acid include but not limited to the to encode DNA sequence of PCSK9, RNA sequence of transcribing from the DNA of coding PCSK9 and the mRNA sequence of coding PCSK9.
" PCSK9mRNA " means the mRNA of coding PCSK9.
PCSK9 treats indication
In certain embodiments, the invention provides the method for the expression of regulating the PCSK9 in the individuality, described method comprises the short antisense compounds that gives targeting PCSK9 nucleic acid.In certain embodiments, the invention provides the individual method of treatment, described method comprises and gives one or more pharmaceutical compositions of the present invention.In certain embodiments, individuality suffers from hypercholesterolemia, Combination dyslipidemia, atherosclerosis, the atherosclerotic risk of development, coronary heart disease, coronary disease medical history, the coronary heart disease of early showing effect, one or more coronary heart disease risk factors, type ii diabetes, type ii diabetes companion dyslipidemia, dyslipidemia, hypertriglyceridemia, hyperlipemia, high fatty acid mass formed by blood stasis, fatty degeneration of liver, non-alcoholic stellato-hepatitis or non-alcohol fatty liver.
The guilding principle that lipid reduces therapy by u.s. national cholesterol education program (NCEP) adult treatment expert scheme III (ATPIII) in calendar year 2001 set up and upgraded in 2004 (Grundyet al., Circulation, 2004,110,227-239).This guilding principle comprises acquisition complete lipoprotein general picture (profile) after fasting in 9-12 hour usually, to determine LDL-C, T-CHOL and HDL-C level.According to the guilding principle of up-to-date formulation, 130-159mg/dL, 160-189mg/dL and think critical height, height and high level respectively more than or equal to the LDL-C level of 190mg/dL.200-239mg/dL and think critical height and high level respectively more than or equal to the total cholesterol level of 240mg/dL.HDL-C level less than 40mg/dL is thought low-level.
In certain embodiments, this individuality has been confirmed as carrying out lipid reduction therapy.In some this embodiment, according to upgrading (Grundyet al. in calendar year 2001 foundation and in 2004 by u.s. national cholesterol education program (NCEP) adult treatment expert scheme III (ATPIII), Circulation, 2004,110, guilding principle 227-239), this individuality have been confirmed as carrying out lipid and have reduced therapy.In certain embodiments, need carry out its LDL-C of this individuality that lipid reduces therapy and be higher than 190mg/dL.In certain embodiments, need carry out its LDL-C of this individuality that lipid reduces therapy and be higher than 160mg/dL.In certain embodiments, need carry out its LDL-C of this individuality that lipid reduces therapy and be higher than 130mg/dL.In certain embodiments, need carry out its LDL-C of this individuality that lipid reduces therapy and be higher than 100mg/dL.In some this embodiment, this individuality that need carry out lipid reduction therapy should keep LDL-C to be lower than 160mg/dL.In some this embodiment, this individuality that need carry out lipid reduction therapy should keep LDL-C to be lower than 130mg/dL.In some this embodiment, this individuality that need carry out lipid reduction therapy should keep LDL-C to be lower than 100mg/dL.In some this embodiment, this individuality should keep LDL-C to be lower than 70mg/dL.
In certain embodiments, the invention provides the method that reduces the ApoB in the individuality.In certain embodiments, the invention provides the method that contains the ApoB lipoprotein that reduces in the individuality.In certain embodiments, the invention provides the method that reduces the LDL-C in the individuality.In certain embodiments, the invention provides the method that reduces the VLDL-C in the individuality.In certain embodiments, the invention provides the method that reduces the IDL-C in the individuality.In certain embodiments, the invention provides the method that reduces the non-IDL-C in the individuality.In certain embodiments, the invention provides the method that reduces the Lp (a) in the individuality.In certain embodiments, the invention provides the method that reduces the serum triglycerides in the individuality.In certain embodiments, the invention provides the method that reduces the liver tg in the individuality.In certain embodiments, the invention provides the method that reduces the Ox-LDL-C in the individuality.In certain embodiments, the invention provides the particulate method of little LDL that reduces in the individuality.In certain embodiments, the invention provides the particulate method of little VLDL that reduces in the individuality.In certain embodiments, the invention provides the method that reduces the phospholipid in the individuality.In certain embodiments, the invention provides the method that reduces the oxidized phospholipids in the individuality.
In certain embodiments, method provided by the invention does not reduce HDL-C.In certain embodiments, method provided by the invention does not cause the accumulation of lipid in liver.
In certain embodiments, the pharmaceutical composition that comprises the short antisense compounds of targeting PCSK9 nucleic acid is for using in treatment.In certain embodiments, described treatment is the reduction of LDL-C, ApoB, VLDL-C, IDL-C, non-HDL-C, Lp (a), serum triglycerides, liver tg, Ox-LDL-C, little LDL granule, little VLDL, phospholipid or oxidized phospholipids in the individuality.In certain embodiments, described treatment is to following treatment of diseases: hypercholesterolemia, Combination dyslipidemia, atherosclerosis, the atherosclerotic risk of development, coronary heart disease, coronary disease medical history, the coronary heart disease of early showing effect, one or more coronary heart disease risk factors, type ii diabetes, type ii diabetes companion dyslipidemia, dyslipidemia, hypertriglyceridemia, hyperlipemia, high fatty acid mass formed by blood stasis, fatty degeneration of liver, non-alcoholic stellato-hepatitis or non-alcohol fatty liver.In other embodiments, treatment is the reduction of CHD risk.In certain embodiments, treatment is atherosclerotic prevention.In certain embodiments, treatment is the prevention of coronary heart disease.
In certain embodiments, the pharmaceutical composition that will comprise the short antisense compounds of targeting PCSK9 nucleic acid is used for preparing the medicine in order to LDL-C, ApoB, VLDL-C, IDL-C, non-HDL-C, Lp (a), serum triglycerides, liver tg, Ox-LDL-C, little LDL granule, little VLDL, phospholipid or the oxidized phospholipids that reduces individuality.In certain embodiments, the pharmaceutical composition that will comprise the short antisense compounds of targeting PCKS9 nucleic acid is used to prepare in order to reduce the medicine of coronary heart disease risk.In certain embodiments, the short antisense compounds of targeting PCSK9 nucleic acid is used to prepare in order to treat the medicine of following disease: hypercholesterolemia, Combination dyslipidemia, atherosclerosis, the atherosclerotic risk of development, coronary heart disease, coronary disease medical history, the coronary heart disease of early showing effect, one or more coronary heart disease risk factors, type ii diabetes, type ii diabetes companion dyslipidemia, dyslipidemia, hypertriglyceridemia, hyperlipemia, high fatty acid mass formed by blood stasis, fatty degeneration of liver, non-alcoholic stellato-hepatitis or non-alcohol fatty liver.
The PCSK9 combination treatment
In certain embodiments, one or more pharmaceutical compositions of the present invention are given altogether with one or more other medicament.In certain embodiments, described one or more other medicament be designed to its disease for the treatment of or disease identical with described one or more pharmaceutical compositions of the present invention.In certain embodiments, described one or more other medicament be designed to its disease for the treatment of or disease different with described one or more pharmaceutical compositions of the present invention.In certain embodiments, described one or more other medicament is designed to treat the ill effect of one or more pharmaceutical compositions of the present invention.In certain embodiments, one or more pharmaceutical compositions of the present invention are given altogether with another medicament, to treat the ill effect of this another medicament.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is given simultaneously.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is given at different time.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is prepared together in single dosage form.In certain embodiments, with other separately preparation of medicament of one or more pharmaceutical compositions of the present invention and one or more.
In certain embodiments, can comprise that lipid reduces medicament with the medicament that pharmaceutical composition of the present invention gives altogether.In some this embodiment, can include but not limited to atorvastatin, simvastatin, rosuvastatin with the medicament that pharmaceutical composition of the present invention gives altogether and according to Ezetimibe.In some this embodiment, lipid is reduced medicament give before the pharmaceutical composition of the present invention giving.In some this embodiment, lipid is reduced medicament after giving pharmaceutical composition of the present invention, give.In some this embodiment, lipid is reduced medicament when giving pharmaceutical composition of the present invention, give.In some this embodiment, the dosage that the lipid that gives altogether reduces medicament is identical with the dosage that gives separately to be given when lipid reduces medicament.In some this embodiment, the dosage that the lipid that gives altogether reduces medicament is lower than the dosage that is given when giving lipid reduction medicament separately.In some this embodiment, the dosage that the lipid that gives altogether reduces medicament is higher than the dosage that is given when giving lipid reduction medicament separately.
In certain embodiments, it is the HMG-CoA reductase inhibitor that the lipid that gives altogether reduces medicament.In some this embodiment, the HMG-CoA reductase inhibitor is an inhibin.In some this embodiment, inhibin is selected from atorvastatin, simvastatin, pravastatin, fluvastatin and rosuvastatin.
In certain embodiments, it is cholesterol absorption inhibitor that the lipid that gives altogether reduces medicament.In some this embodiment, cholesterol absorption inhibitor is according to Ezetimibe.
In certain embodiments, it is HMG-CoA reductase inhibitor and cholesterol absorption inhibitor formulated together altogether that the lipid that gives altogether reduces medicament.In some this embodiment, it is according to Ezetimibe/simvastatin that lipid formulated together altogether reduces medicament.
In certain embodiments, it is microsomal triglyceride transfer protein inhibitor (MTP inhibitor) that the lipid that gives altogether reduces medicament.
In certain embodiments, the medicament that gives altogether is the oligonucleotide of targeting ApoB nucleic acid.
In certain embodiments, the medicament that gives altogether is a bile acid chelating agent.In some this embodiment, bile acid chelating agent is selected from colestyramine, colestipol and colesevelam.
In certain embodiments, the medicament that gives altogether is a nicotinic acid.In some this embodiment, nicotinic acid is selected from rapid release nicotinic acid, extended release nicotinic acid and slow release nicotinic acid.
In certain embodiments, the medicament that gives altogether is a Carboxymethylcellulose.In some this embodiment, Carboxymethylcellulose is selected from gemfibrozil, fenofibrate, chlorine Bei Te, bezafibrate and ciprofibrate.
More examples of the medicament that can give altogether with pharmaceutical composition of the present invention include but not limited to corticosteroid (including but not limited to prednisone); Immunoglobulin (includes but not limited to vein immunoglobulin (IVIg); Analgesic (for example acetaminophen); Antiinflammatory (including but not limited to NSAID (non-steroidal anti-inflammatory drug) (for example ibuprofen, COX-1 inhibitor and cox 2 inhibitor)); Salicylate; Antibiotic; Antiviral agent; Antifungal; Antidiabetic medicine (for example biguanide, glucosidase inhibitor, insulin, sulfonylureas and thiazolidinediones); The adrenergic modulation agent; Diuretic; Hormone (for example short anabolism steroid, androgen, estrogen, calcitonin, progesterone, somatostatin and thyroxin); Immunomodulator; Muscle relaxant; Hydryllin; Osteoporosis medicament (for example diphosphonate, calcitonin and estrogen); Prostaglandin; Antineoplastic agent; The spiritual healing medicament; Tranquilizer; Poison Oak Tree (oak) or black poison wood (sumac) product; Antibody and vaccine.
In certain embodiments, pharmaceutical composition of the present invention can be reduced therapy in conjunction with lipid gives.In some this embodiment, it is that curative life style changes that lipid reduces therapy.In some this embodiment, it is the LDL Apheresis that lipid reduces therapy.
The short antisense compounds of some targeting PCSK9 nucleic acid
In certain embodiments, lacking the antisense compounds targeting has
The PCSK9 nucleic acid of the sequence of searching number NM_174936.2 (being incorporated herein) with SEQ ID NO:4.
In some this embodiment, short antisense compounds and the SEQID NO:4 of targeting SEQ ID NO:4 have at least 90% complementarity.In some this embodiment, the short antisense compounds of targeting SEQ IDNO:4 and SEQ ID NO:4 have at least 95% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:4 of targeting SEQ ID NO:4 have 100% complementarity.In certain embodiments, the short antisense compounds of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from the nucleotide sequence that provides in table 6 and 7.
The nucleotide sequence that each SEQ ID NO provides in the table 6 and 7 is independent of any to connecting the modification of key or nuclear base between sugar moieties, nucleoside.Thus, the defined short antisense compounds of certain SEQ ID NO can comprise one or more to connecting the modification of key or nuclear base between sugar moieties, nucleoside independently.Isis number (Isis NO.) described antisense compounds represented the nuclear base sequence with one or more to connecting key between sugar moieties, nucleoside or examining the combination of the modification of base.
Table 6 and 7 has been enumerated the example of the short antisense compounds of targeting SEQ ID NO:4.Table 6 has been enumerated the short antisense compounds that 100% complementarity is arranged with SEQ ID NO:4.Table 7 has been enumerated the short antisense compounds that has one or two mispairing with respect to SEQ ID NO:4.The file that is marked with " gapmer die body " is represented the pterion of each short antisense compounds-at interval-pterion die body.Spacer segment comprises 2 '-deoxyribonucleotide, and each nucleotide of each pterion section comprises the sugar through 2 '-modification.The concrete sugar through 2 '-modification is also represented in " gapmer die body " file.For example, " 2-10-2 MOE " means 2-10-2 gapmer die body, and wherein the spacer segment both sides of 10 2 '-deoxyribonucleotides are connected to the pterion section of 2 nucleotide, and wherein the nucleotide of pterion section is 2 '-MOE nucleotide.Connecting key between nucleoside is thiophosphate.Short antisense compounds comprises the 5-methylcytidine that substitutes not modified cytosine, unless show " not modified cytosine " in the gapmer die body file, represented in this case cytosine is not modified cytosine.For example, " 5-mC is only in the interval " expression spacer segment has the 5-methylcytidine, and the pterion section has not modified cytosine.
Table 6: the short antisense compounds of targeting SEQ ID NO:4
| ISIS NO. | 5 ' target site | 3 ' target site | Sequence (5 '-3 ') | The Gapmer die body | SEQ ID NO |
| 400297 | 695 | 708 | ATGGGGCAACTTCA | 2-10-2 MOE | 329 |
| 400298 | 696 | 709 | CATGGGGCAACTTC | 2-10-2 MOE | 330 |
| 400299 | 697 | 710 | ACATGGGGCAACTT | 2-10-2 MOE | 331 |
| 400300 | 742 | 755 | GGGATGCTCTGGGC | 2-10-2 MOE | 332 |
| 400301 | 757 | 770 | CGCTCCAGGTTCCA | 2-10-2 MOE | 333 |
| 400302 | 828 | 841 | GATACACCTCCACC | 2-10-2 MOE | 334 |
| 400303 | 829 | 842 | AGATACACCTCCAC | 2-10-2 MOE | 335 |
| 400304 | 830 | 843 | GAGATACACCTCCA | 2-10-2 MOE | 336 |
| 400305 | 937 | 950 | GCCTGTCTGTGGAA | 2-10-2 MOE | 337 |
| 400306 | 952 | 965 | CTGTCACACTTGCT | 2-10-2 MOE | 338 |
| 400307 | 988 | 1001 | CGGCCGCTGACCAC | 2-10-2 MOE | 339 |
| 400308 | 989 | 1002 | CCGGCCGCTGACCA | 2-10-2 MOE | 340 |
| 400309 | 990 | 1003 | CCCGGCCGCTGACC | 2-10-2 MOE | 341 |
| 400310 | 991 | 1004 | TCCCGGCCGCTGAC | 2-10-2 MOE | 342 |
| 400311 | 992 | 1005 | ATCCCGGCCGCTGA | 2-10-2 MOE | 343 |
| 400312 | 993 | 1006 | CATCCCGGCCGCTG | 2-10-2 MOE | 344 |
| 400313 | 994 | 1007 | GCATCCCGGCCGCT | 2-10-2 MOE | 345 |
| 400314 | 1057 | 1070 | GTGCCCTTCCCTTG | 2-10-2 MOE | 346 |
| 400315 | 1075 | 1088 | ATGAGGGTGCCGCT | 2-10-2 MOE | 347 |
| 400316 | 1076 | 1089 | TATGAGGGTGCCGC | 2-10-2 MOE | 348 |
| 400317 | 1077 | 1090 | CTATGAGGGTGCCG | 2-10-2 MOE | 349 |
| 400318 | 1078 | 1091 | CCTATGAGGGTGCC | 2-10-2 MOE | 350 |
| 400319 | 1093 | 1106 | CGAATAAACTCCAG | 2-10-2 MOE | 351 |
| 400320 | 1094 | 1107 | CCGAATAAACTCCA | 2-10-2 MOE | 352 |
| 400321 | 1095 | 1108 | TCCGAATAAACTCC | 2-10-2 MOE | 353 |
| 400322 | 1096 | 1109 | TTCCGAATAAACTC | 2-10-2 MOE | 354 |
| 400323 | 1147 | 1160 | GCCAGGGGCAGCAG | 2-10-2 MOE | 355 |
| 400324 | 1255 | 1268 | GAGTAGAGGCAGGC | 2-10-2 MOE | 356 |
| 400325 | 1334 | 1347 | CCCCAAAGTCCCCA | 2-10-2 MOE | 357 |
| 400326 | 1335 | 1348 | TCCCCAAAGTCCCC | 2-10-2 MOE | 358 |
| 400327 | 1336 | 1349 | GTCCCCAAAGTCCC | 2-10-2 MOE | 359 |
| 400328 | 1453 | 1466 | ACGTGGGCAGCAGC | 2-10-2 MOE | 360 |
| 400329 | 1454 | 1467 | CACGTGGGCAGCAG | 2-10-2 MOE | 361 |
| 400330 | 1455 | 1468 | CCACGTGGGCAGCA | 2-10-2 MOE | 362 |
| 400331 | 1456 | 1469 | GCCACGTGGGCAGC | 2-10-2 MOE | 363 |
| 400332 | 1569 | 1582 | CAGGGAACCAGGCC | 2-10-2 MOE | 364 |
| 400333 | 1570 | 1583 | TCAGGGAACCAGGC | 2-10-2 MOE | 365 |
| 400334 | 1571 | 1584 | CTCAGGGAACCAGG | 2-10-2 MOE | 366 |
| 400335 | 1572 | 1585 | CCTCAGGGAACCAG | 2-10-2 MOE | 367 |
| 400336 | 1573 | 1586 | TCCTCAGGGAACCA | 2-10-2 MOE | 368 |
| 400337 | 1574 | 1587 | GTCCTCAGGGAACC | 2-10-2 MOE | 369 |
| 400338 | 1575 | 1588 | GGTCCTCAGGGAAC | 2-10-2 MOE | 370 |
| 400339 | 1576 | 1589 | TGGTCCTCAGGGAA | 2-10-2 MOE | 371 |
| 400340 | 1577 | 1590 | CTGGTCCTCAGGGA | 2-10-2 MOE | 372 |
| 400341 | 1578 | 1591 | GCTGGTCCTCAGGG | 2-10-2 MOE | 373 |
| 400342 | 1621 | 1634 | GTGCTGGGGGGCAG | 2-10-2 MOE | 374 |
| 400343 | 1622 | 1635 | GGTGCTGGGGGGCA | 2-10-2 MOE | 375 |
| 400344 | 1623 | 1636 | GGGTGCTGGGGGGC | 2-10-2 MOE | 376 |
| 400345 | 1624 | 1637 | TGGGTGCTGGGGGG | 2-10-2 MOE | 377 |
| 400346 | 1738 | 1751 | GAGCAGCTCAGCAG | 2-10-2 MOE | 378 |
| 400347 | 1739 | 1752 | GGAGCAGCTCAGCA | 2-10-2 MOE | 379 |
| 400348 | 1740 | 1753 | TGGAGCAGCTCAGC | 2-10-2 MOE | 380 |
| 400349 | 1741 | 1754 | CTGGAGCAGCTCAG | 2-10-2 MOE | 381 |
| 400350 | 1834 | 1847 | CCCTCACCCCCAAA | 2-10-2 MOE | 382 |
| 400351 | 1835 | 1848 | ACCCTCACCCCCAA | 2-10-2 MOE | 383 |
| 400352 | 1836 | 1849 | CACCCTCACCCCCA | 2-10-2 MOE | 384 |
| 400353 | 1837 | 1850 | ACACCCTCACCCCC | 2-10-2 MOE | 385 |
| 400354 | 1838 | 1851 | GACACCCTCACCCC | 2-10-2 MOE | 386 |
| 400355 | 1839 | 1852 | AGACACCCTCACCC | 2-10-2 MOE | 387 |
| 400356 | 1840 | 1853 | TAGACACCCTCACC | 2-10-2 MOE | 388 |
| 400357 | 2083 | 2096 | TGGCAGCAGGAAGC | 2-10-2 MOE | 389 |
| 400358 | 2084 | 2097 | ATGGCAGCAGGAAG | 2-10-2 MOE | 390 |
| 400359 | 2085 | 2098 | CATGGCAGCAGGAA | 2-10-2 MOE | 391 |
| 400360 | 2086 | 2099 | GCATGGCAGCAGGA | 2-10-2 MOE | 392 |
| 400361 | 2316 | 2329 | GGCAGCAGATGGCA | 2-10-2 MOE | 393 |
| 400362 | 2317 | 2330 | CGGCAGCAGATGGC | 2-10-2 MOE | 394 |
| 400363 | 2318 | 2331 | CCGGCAGCAGATGG | 2-10-2 MOE | 395 |
| 400364 | 2319 | 2332 | TCCGGCAGCAGATG | 2-10-2 MOE | 396 |
| 400365 | 2320 | 2333 | CTCCGGCAGCAGAT | 2-10-2 MOE | 397 |
| 400366 | 2321 | 2334 | GCTCCGGCAGCAGA | 2-10-2 MOE | 398 |
| 400367 | 2322 | 2335 | GGCTCCGGCAGCAG | 2-10-2 MOE | 399 |
| 400368 | 2323 | 2336 | CGGCTCCGGCAGCA | 2-10-2 MOE | 400 |
| 400369 | 2324 | 2337 | CCGGCTCCGGCAGC | 2-10-2 MOE | 401 |
| 400370 | 2325 | 2338 | GCCGGCTCCGGCAG | 2-10-2 MOE | 402 |
| 400371 | 3543 | 3556 | AGTTACAAAAGCAA | 2-10-2 MOE | 403 |
| 403739 | 988 | 1001 | CGGCCGCTGACCAC | 2-10-2 (6 ' S)-6 '-methyl-methylene oxygen base BNA | 339 |
| 403740 | 1455 | 1468 | CCACGTGGGCAGCA | 2-10-2 (6 ' S)-6 '-methyl-methylene oxygen base BNA | 362 |
Table 7: targeting SEQ ID NO:4 and have the short antisense compounds of 1 or 2 mispairing
| ISIS NO. | 5 ' target site | 3 ' target site | Sequence (5 '-3 ') | The Gapmer die body | SEQ ID NO |
| 400323 | 349 | 362 | GCCAGGGGCAGCAG | 2-10-2 MOE | 355 |
| 400370 | 679 | 692 | GCCGGCTCCGGCAG | 2-10-2 MOE | 402 |
| 400361 | 1860 | 1873 | GGCAGCAGATGGCA | 2-10-2 MOE | 393 |
| 400323 | 1873 | 1886 | GCCAGGGGCAGCAG | 2-10-2 MOE | 355 |
| 400310 | 2257 | 2270 | TCCCGGCCGCTGAC | 2-10-2 MOE | 342 |
| 400361 | 2653 | 2666 | GGCAGCAGATGGCA | 2-10-2 MOE | 393 |
| 400350 | 2811 | 2824 | CCCTCACCCCCAAA | 2-10-2 MOE | 382 |
| 400351 | 2812 | 2825 | ACCCTCACCCCCAA | 2-10-2 MOE | 383 |
| 400352 | 2813 | 2826 | CACCCTCACCCCCA | 2-10-2 MOE | 384 |
| 400353 | 2814 | 2827 | ACACCCTCACCCCC | 2-10-2 MOE | 385 |
| 400334 | 2966 | 2979 | CTCAGGGAACCAGG | 2-10-2 MOE | 366 |
| 400332 | 3379 | 3392 | CAGGGAACCAGGCC | 2-10-2 MOE | 364 |
| 400340 | 3448 | 3461 | CTGGTCCTCAGGGA | 2-10-2 MOE | 372 |
| 400341 | 3449 | 3462 | GCTGGTCCTCAGGG | 2-10-2 MOE | 373 |
In certain embodiments, the target zone is the nucleotide 695-710 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 695-710 of targeting SEQ ID NO:4 comprises and is selected from SEQ ID NO:329,330 or 331 nucleotide sequence.In some this embodiment, the short antisense compounds of the nucleotide 695-710 of targeting SEQ ID NO:4 is selected from Isis NO.400297,400298 or 400299.
In certain embodiments, the target zone is the nucleotide 742-770 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 742-770 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 332 or 333.In some this embodiment, the short antisense compounds of the nucleotide 742-770 of targeting SEQ ID NO:4 is selected from Isis NO.400300 or 400301.
In certain embodiments, the target zone is the nucleotide 828-843 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 828-843 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 334,335 or 336.In some this embodiment, the short antisense compounds of the nucleotide 828-843 of targeting SEQ ID NO:4 is selected from ISIS No.400302,400303 or 400304.
In certain embodiments, the target zone is the nucleotide 937-1007 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 937-1007 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 337,338,339,340,341,342,343,344 or 345.In some this embodiment, the short antisense compounds of the nucleotide 937-1007 of targeting SEQ ID NO:4 is selected from Isis NO.400305,400306,400307,400308,400309,400310,400311,400312,400313 or 403739.
In certain embodiments, the target zone is the nucleotide 937-965 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 937-965 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 337 or 338.In some this embodiment, the short antisense compounds of the nucleotide 937-965 of targeting SEQ ID NO:4 is selected from Isis NO.400305 or 400306.
In certain embodiments, the target zone is the nucleotide 988-1007 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 988-1007 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 339,340,341,342,343,344 or 345.In some this embodiment, the short antisense compounds of the nucleotide 937-1007 of targeting SEQ IDNO:4 is selected from Isis NO.400307,400308,400309,400310,400311,400312,4003313 or 403739.
In certain embodiments, the target zone is the nucleotide 1057-1160 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 1057-1160 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 346,347,348,349,350,351,352,353,354 or 355.In some this embodiment, the short antisense compounds of the nucleotide 1057-1160 of targeting SEQ ID NO:4 is selected from ISIS NO.400314,400315,400316,400317,400318,400319,400320,400321,400322 or 400323.
In certain embodiments, the target zone is the nucleotide 1057-1109 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 1057-1109 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 346,347,348,349,350,351,352,353 or 354.In some this embodiment, the short antisense compounds of the nucleotide 1057-1109 of targeting SEQ ID NO:4 is selected from ISIS NO.400314,400315,400316,400317,400318,400319,400320,400321 or 400322.
In certain embodiments, the target zone is the nucleotide 1057-1091 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 1057-1091 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 346,347,348,349 or 350.In some this embodiment, the short antisense compounds of the nucleotide 1057-1091 of targeting SEQ ID NO:4 is selected from ISIS NO.400314,400315,400316,400317 or 400318.
In certain embodiments, the target zone is the nucleotide 1093-1109 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 1093-1109 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 351,352,353 or 354.In some this embodiment, the short antisense compounds of the nucleotide 1057-1109 of targeting SEQ ID NO:4 is selected from ISIS NO.400319,400320,400321 or 400322.
In certain embodiments, the target zone is the nucleotide 1334-1349 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 1334-1349 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 357,358 or 359.In some this embodiment, the short antisense compounds of the nucleotide 1334-1349 of targeting SEQ ID NO:4 is selected from ISIS NO 400325,400326 or 400327.
In certain embodiments, the target zone is the nucleotide 1453-1469 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 1453-1469 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 360,361,362 or 363.In some this embodiment, the short antisense compounds of the nucleotide 1453-1469 of targeting SEQ ID NO:4 is selected from ISIS NO 400328,400329,400330,400331 or 403470.
In certain embodiments, the target zone is the nucleotide 1569-1591 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 1569-1591 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 364,365,366,367,368,369,370,371,372 or 373.In some this embodiment, the short antisense compounds of the nucleotide 1569-1591 of targeting SEQ ID NO:4 is selected from ISIS NO 400332,400333,400334,400335,400336,400337,400338,400339,400340 or 400341.
In certain embodiments, the target zone is the nucleotide 1621-1637 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 1621-1637 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 374,375,376 or 377.In some this embodiment, the short antisense compounds of the nucleotide 1621-1637 of targeting SEQ ID NO:4 is selected from ISIS NO 400342,400343,400344 or 400345.
In certain embodiments, the target zone is the nucleotide 1738-1754 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 1738-1754 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 378,379,380 or 381.In some this embodiment, the short antisense compounds of the nucleotide 1738-1754 of targeting SEQ ID NO:4 is selected from ISIS NO 400346,400347,400348 or 400349.
In certain embodiments, the target zone is the nucleotide 1834-1853 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 1834-1853 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 382,383,384,385,386,387 or 388.In some this embodiment, the short antisense compounds of the nucleotide 1834-1853 of targeting SEQ IDNO:4 is selected from ISIS NO 400350,400351,400352,400353,400354,400355 or 400356.
In certain embodiments, the target zone is the nucleotide 2083-2099 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 2083-2099 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 389,390,391 or 392.In some this embodiment, the short antisense compounds of the nucleotide 2083-2099 of targeting SEQ ID NO:4 is selected from ISIS NO400357,400358,400359 or 400360.
In certain embodiments, the target zone is the nucleotide 2316-2338 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 2316-2338 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 393,394,395,396,397,398,399,400,401 or 402.In some this embodiment, the short antisense compounds of the nucleotide 2316-2338 of targeting SEQ ID NO:4 is selected from ISIS NO 400361,400362,400363,400364,400365,400366,400367,400368,400369 or 400370.
In certain embodiments, its length of short antisense compounds of targeting PCSK9 nucleic acid is 8-16, preferred 9-15, more preferably 9-14, more preferably 10-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting PCSK9 nucleic acid is 9-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting PCSK9 nucleic acid is 10-14 nucleotide.In certain embodiments, this short antisense compounds is short antisense oligonucleotide.
In certain embodiments, the short antisense compounds of targeting PCSK9 nucleic acid is short gapmer.In some this embodiment, comprise at least one high-affinity in the short gapmer of targeting PCSK9 nucleic acid one or more pterions therein and modify.In certain embodiments, the short antisense compounds of targeting PCSK9 nucleic acid comprises 1-3 high-affinity modification in each pterion.In some this embodiment, the nucleoside in pterion or nucleotide comprise 2 ' and modify.In some this embodiment, the monomer in pterion is BNA.In some this embodiment, the monomer in pterion is selected from α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA, β-D-methylene oxygen base (4 '-CH2-O-2 ') BNA, ethyleneoxy group (4 '-(CH2)2-O-2 ') BNA, amino oxygen base (4 '-CH2-O-N (R)-2 ') BNA and oxygen base amino (4 '-CH2-N (R)-O-2 ') BNA.In certain embodiments, the monomer in pterion comprises in 2 ' position and is selected from following substituent group: pi-allyl, amino, azido, thio group, O-pi-allyl, O-C1-C10Alkyl ,-OCF3, O-(CH2)2-O-CH3, 2 '-O (CH2)2SCH3, O-(CH2)2-O-N (Rm) (Rn) and O-CH2-C (=O)-N (Rm) (Rn), each R whereinmAnd RnIndependent is H or substituted or unsubstituted C1-C10Alkyl.In certain embodiments, the monomer in pterion is 2 ' MOE nucleotide.
In certain embodiments, the short antisense compounds of targeting PCSK9 nucleic acid comprises between 5 ' pterion and 3 ' pterion at interval.In certain embodiments, comprise 5,6,7,8,9,10,11,12,13 or 14 monomers at interval.In certain embodiments, Jian Ge monomer is not modified deoxyribonucleotide.In certain embodiments, Jian Ge monomer is not modified ribonucleotide.In certain embodiments, modify (if any) at interval and cause producing such antisense compounds, when in conjunction with its target nucleic acids, this chemical compound can be supported the cutting of RNA enzyme (including but not limited to RNA enzyme H).
In certain embodiments, the short antisense compounds of targeting PCSK9 nucleic acid can have short antisense compounds characteristic or feature any or that multiple this paper summarized.In certain embodiments, the short antisense compounds of targeting PCSK9 nucleic acid has and is selected from following die body (pterion-deoxidation interval-pterion): 1-12-1,1-1-10-2,2-10-1-1,3-10-3,2-10-3,2-10-2,1-10-1,1-10-2,3-8-3,2-8-2,1-8-1,3-6-3 or 1-6-1, more preferably 1-10-1,2-10-2,3-10-3 and 1-9-2.
In certain embodiments, the short antisense compounds of targeting PCSK9 nucleic acid has the same Dan Julian key.In some this embodiment, these keys all are that thiophosphate connects key.In certain embodiments, Lian Jian is that di-phosphate ester connects key.In certain embodiments, the short antisense compounds of targeting PCSK9 nucleic acid has mixed matrix.
In certain embodiments, its length of short antisense compounds of targeting PCSK9 nucleic acid is 8 monomers.In certain embodiments, its length of short antisense compounds of targeting PCSK9 nucleic acid is 9 monomers.In certain embodiments, its length of short antisense compounds of targeting PCSK9 nucleic acid is 10 monomers.In certain embodiments, its length of short antisense compounds of targeting PCSK9 nucleic acid is 11 monomers.In certain embodiments, its length of short antisense compounds of targeting PCSK9 nucleic acid is 12 monomers.In certain embodiments, its length of short antisense compounds of targeting PCSK9 nucleic acid is 13 monomers.In certain embodiments, its length of short antisense compounds of targeting PCSK9 nucleic acid is 14 monomers.In certain embodiments, its length of short antisense compounds of targeting PCSK9 nucleic acid is 15 monomers.In certain embodiments, its length of short antisense compounds of targeting PCSK9 nucleic acid is 16 monomers.In certain embodiments, the short antisense compounds of targeting PCSK9 nucleic acid comprises 9-15 monomer.In certain embodiments, the short antisense compounds of targeting PCSK9 nucleic acid comprises 10-15 monomer.In certain embodiments, the short antisense compounds of targeting PCSK9 nucleic acid comprises 12-14 monomer.In certain embodiments, the short antisense compounds of targeting PCSK9 nucleic acid comprises 12-14 nucleotide or nucleoside.
In certain embodiments, the invention provides the method for the expression of regulating PCSK9.In certain embodiments, this method comprises the short antisense compounds that uses one or more targeting PCSK9 nucleic acid, and wherein the short antisense compounds of this targeting PCSK9 nucleic acid is about 8 to about 16, preferably 9-15, more preferably 9-14, more preferably 10-14 monomer (promptly about 8 monomer to about 16 connections).Those of ordinary skills will appreciate that, this comprises the method that the short antisense compounds that uses one or more 8,9,10,11,12,13,14,15 or 16 monomeric targeting PCSK9 nucleic acid is regulated the expression of PCSK9.
In certain embodiments, the method for adjusting PCSK9 comprises that using length is the short antisense compounds of 8 monomeric targeting PCSK9 nucleic acid.In certain embodiments, the method for adjusting PCSK9 comprises that using length is the short antisense compounds of 9 monomeric targeting PCSK9 nucleic acid.In certain embodiments, the method for adjusting PCSK9 comprises that using length is the short antisense compounds of 10 monomeric targeting PCSK9 nucleic acid.In certain embodiments, the method for adjusting PCSK9 comprises that using length is the short antisense compounds of 11 monomeric targeting PCSK9 nucleic acid.In certain embodiments, the method for adjusting PCSK9 comprises that using length is the short antisense compounds of 12 monomeric targeting PCSK9 nucleic acid.In certain embodiments, the method for adjusting PCSK9 comprises that using length is the short antisense compounds of 13 monomeric targeting PCSK9 nucleic acid.In certain embodiments, the method for adjusting PCSK9 comprises that using length is the short antisense compounds of 14 monomeric targeting PCSK9 nucleic acid.In certain embodiments, the method for adjusting PCSK9 comprises that using length is the short antisense compounds of 15 monomeric targeting PCSK9 nucleic acid.In certain embodiments, the method for adjusting PCSK9 comprises that using length is the short antisense compounds of 16 monomeric targeting PCSK9 nucleic acid.
In certain embodiments, the method for the expression of adjusting PCSK9 comprises that use comprises the short antisense compounds of 9-15 monomeric targeting PCSK9 nucleic acid.In certain embodiments, the method for the expression of adjusting PCSK9 comprises that use comprises the short antisense compounds of 10-15 monomeric targeting PCSK9 nucleic acid.In certain embodiments, the method for the expression of adjusting PCSK9 comprises that use comprises the short antisense compounds of 12-14 monomeric targeting PCSK9 nucleic acid.In certain embodiments, the method for the expression of adjusting PCSK9 comprises the short antisense compounds that uses the targeting PCSK9 nucleic acid that comprises 12-14 nucleotide or nucleoside.
4. superoxide dismutase 1 (SOD1)
Superoxide dismutase (SOD) can be by the catalysis superoxides to hydrogen peroxide (H2O2) disproportionation provide opposing to the oxidative damage of biomolecule (Fridovich, Annu.Rev.Biochem., 1995,64,97-112).Superoxide dismutase mainly contains two classes.One class is made up of one group of enzyme of the avtive spot with cupric and zinc, and another kind of avtive spot have manganese or ferrum (Fridovich, Annu.Rev.Biochem., 1995,64,97-112).
The sudden change in superoxide dismutase 1 gene and the amyotrophic lateral sclerosis of dominant inheritance's form (ALS also claims Lou Gehrig disease) are relevant, and the selectivity degeneration of the above lower motor neuron of this disease is feature (Cleveland and Liu, Nat.Med., 2000,6,1320-1321).Various sudden changes are likely that to the illeffects of superoxide dismutase 1 toxicity function rather than loss superoxide dismutase 1 activity mediate by promoting, can not cause obvious disease (Al-Chalabi and Leigh because neither can shorten the life-span when in mice, not having superoxide dismutase 1 fully yet, Curr.Opin.Neurol., 2000,13,397-405; Aliskyand Davidson, Hum.Gene Ther., 2000,11,2315-2329).
Identified 100 various mutations of people SOD1 gene, these sudden changes cause about 20% familial amyotrophic lateral sclerosis (ALS) case altogether.Some sudden changes (for example modal A4V sudden change of the U.S.) are highly lethal, only can survive 9 months from the disease symptoms outbreak.Other sudden changes of SOD1 show with slower disease process.
Definition
" SOD1 " means its expression and treats by lacking gene outcome or the protein that antisense compounds is regulated.
" SOD1 nucleic acid " means the nucleic acid of any coding SOD1.For example, in certain embodiments, SOD1 nucleic acid include but not limited to the to encode DNA sequence of SOD1, the RNA sequence of transcribing from the DNA of coding SOD1 and the mRNA sequence of coding SOD1.
" SOD1 mRNA " means the mRNA of coding SOD1.
SOD1 treats indication
Found that the Antisense Suppression to superoxide dismutase 1 (SOD1) can reduce SOD1 mRNA and protein simultaneously in the animal model of familial ALS, and further caused slowing down of progression of disease, the more important thing is that the time-to-live increases.Therefore, in certain embodiments, the invention provides by the short antisense compounds of targeting SOD1 nucleic acid being suffered from the individuality of familial ALS, the method for the progression of disease in the described individuality that slows down.In some this embodiment, the short antisense compounds of targeting SOD1 directly is delivered to the cerebrospinal fluid of individuality.In some this embodiment, described method also comprises the time-to-live that increases the individuality of suffering from familial ALS.Slowing down of progression of disease represented by the improvement of one or more indications of ALS progression of disease, and described indication includes but not limited to that modified ALS functional scale, pulmonary function test and muscle strength measure.
The SOD1 combination treatment
In certain embodiments, the pharmaceutical composition that one or more is comprised the short antisense compounds of targeting SOD1 nucleic acid gives altogether with one or more other medicament.In certain embodiments, described one or more other medicament be designed to its disease for the treatment of or disease identical with described one or more pharmaceutical compositions of the present invention.In certain embodiments, described one or more other medicament be designed to its disease for the treatment of or disease different with described one or more pharmaceutical compositions of the present invention.In certain embodiments, described one or more other medicament is designed to treat the ill effect of one or more pharmaceutical compositions of the present invention.In certain embodiments, one or more pharmaceutical compositions of the present invention are given altogether with another medicament, to treat the ill effect of this another medicament.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is given simultaneously.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is given at different time.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is prepared together in single dosage form.In certain embodiments, with other separately preparation of medicament of one or more pharmaceutical compositions of the present invention and one or more.
In certain embodiments, the medicament that gives altogether is a nicotinic acid.In some this embodiment, nicotinic acid is selected from rapid release nicotinic acid, extended release nicotinic acid and slow release nicotinic acid.
In certain embodiments, the medicament that gives altogether is a Carboxymethylcellulose.In some this embodiment, Carboxymethylcellulose is selected from gemfibrozil, fenofibrate, chlorine Bei Te, bezafibrate and ciprofibrate.
More examples of the medicament that can give altogether with the pharmaceutical composition of the short antisense compounds that comprises targeting SOD1 include but not limited to corticosteroid (including but not limited to prednisone); Immunoglobulin (includes but not limited to vein immunoglobulin (IVIg); Analgesic (for example acetaminophen); Antiinflammatory (including but not limited to NSAID (non-steroidal anti-inflammatory drug) (for example ibuprofen, COX-1 inhibitor and cox 2 inhibitor)); Salicylate; Antibiotic; Antiviral agent; Antifungal; Antidiabetic medicine (for example biguanide, glucosidase inhibitor, insulin, sulfonylureas and thiazolidinediones); The adrenergic modulation agent; Diuretic; Hormone (for example short anabolism steroid, androgen, estrogen, calcitonin, progesterone, somatostatin and thyroxin); Immunomodulator; Muscle relaxant; Hydryllin; Osteoporosis medicament (for example diphosphonate, calcitonin and estrogen); Prostaglandin; Antineoplastic agent; The spiritual healing medicament; Tranquilizer; Poison Oak Tree (oak) or black poison wood (sumac) product; Antibody and vaccine.
The short antisense compounds of some targeting SOD1 nucleic acid
In certain embodiments, lacking the antisense compounds targeting hasThe SOD1 nucleic acid of the sequence of searching number NM_X02317.1 (being incorporated herein) with SEQ ID NO:5.In some this embodiment, short antisense compounds and the SEQID NO:5 of targeting SEQ ID NO:5 have at least 90% complementarity.In some this embodiment, the short antisense compounds of targeting SEQ IDNO:5 and SEQ ID NO:5 have at least 95% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:5 of targeting SEQ ID NO:5 have 100% complementarity.In certain embodiments, the short antisense compounds of targeting SEQ ID NO:5 comprises the nucleotide sequence that is selected from the nucleotide sequence that provides in table 8 and 9.
The nucleotide sequence that each SEQ ID NO provides in the table 8 and 9 is independent of any to connecting the modification of key or nuclear base between sugar moieties, nucleoside.Thus, the defined short antisense compounds of certain SEQ ID NO can comprise one or more to connecting the modification of key or nuclear base between sugar moieties, nucleoside independently.Isis number (Isis NO.) described antisense compounds represented the nuclear base sequence with one or more to connecting key between sugar moieties, nucleoside or examining the combination of the modification of base.
Table 8 has been enumerated the example of the short antisense compounds of targeting SEQ ID NO:5.Table 8 has been enumerated the short antisense compounds that 100% complementarity is arranged with SEQ ID NO:5.The file that is marked with " gapmer die body " is represented the pterion of each short antisense compounds-at interval-pterion die body.Spacer segment comprises 2 '-deoxyribonucleotide, and each nucleotide of each pterion section comprises the sugar through 2 '-modification.The concrete sugar through 2 '-modification is also represented in " gapmer die body " file.For example, " 2-10-2 MOE " means 2-10-2 gapmer die body, and wherein the spacer segment both sides of 10 2 '-deoxyribonucleotides are connected to the pterion section of 2 nucleotide, and wherein the nucleotide of pterion section is 2 '-MOE nucleotide.Connecting key between nucleoside is thiophosphate.Short antisense compounds comprises the 5-methylcytidine that substitutes not modified cytosine, unless show " not modified cytosine " in the gapmer die body file, represented in this case cytosine is not modified cytosine.For example, " 5-mC is only in the interval " expression spacer segment has the 5-methylcytidine, and the pterion section has not modified cytosine.
In certain embodiments, the short antisense compounds of targeting SOD1 nucleic acid can have short antisense compounds characteristic or feature any or that multiple this paper summarized.In certain embodiments, the short antisense compounds of targeting SOD1 nucleic acid has and is selected from following die body (pterion-deoxidation interval-pterion): 1-12-1,1-1-10-2,2-10-1-1,3-10-3,2-10-3,2-10-2,1-10-1,1-10-2,3-8-3,2-8-2,1-8-1,3-6-3 or 1-6-1, more preferably 1-10-1,2-10-2,3-10-3 and 1-9-2.
Table 8: the short antisense compounds of targeting SEQ ID NO:5
| ISIS NO. | 5 ' target site | 3 ' target site | Sequence (5 '-3 ') | The Gapmer die body | SEQ ID NO |
| 387541 | 85 | 100 | GTCGCCCTTCAGCACG | 3-10-3 MOE | 406 |
| 387540 | 86 | 99 | TCGCCCTTCAGCAC | 2-10-2 MOE | 407 |
| 387539 | 87 | 98 | CGCCCTTCAGCA | 1-10-1 MOE | 408 |
In certain embodiments, the target zone is the nucleotide 85-100 of SEQ ID NO:5.In some this embodiment, the short antisense compounds of the nucleotide 85-100 of targeting SEQ ID NO:5 comprises and is selected from SEQ ID NO:406,407 or 408 nucleotide sequence.In some this embodiment, the short antisense compounds of the nucleotide 85-100 of targeting SEQ ID NO:5 is selected from Isis No.387541,387540 or 387539.
In certain embodiments, its length of short antisense compounds of targeting SOD1 nucleic acid is 8-16, preferred 9-15, more preferably 9-14, more preferably 10-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting SOD1 nucleic acid is 9-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting SOD1 nucleic acid is 10-14 nucleotide.In certain embodiments, this short antisense compounds is short antisense oligonucleotide.
In certain embodiments, the short antisense compounds of targeting SOD1 nucleic acid is short gapmer.In some this embodiment, comprise at least one high-affinity in the short gapmer of targeting SOD1 nucleic acid one or more pterions therein and modify.In certain embodiments, the short antisense compounds of targeting SOD1 nucleic acid comprises 1-3 high-affinity modification in each pterion.In some this embodiment, the nucleoside in pterion or nucleotide comprise 2 ' and modify.In some this embodiment, the monomer in pterion is BNA.In some this embodiment, the monomer in pterion is selected from α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA, β-D-methylene oxygen base (4 '-CH2-O-2 ') BNA, ethyleneoxy group (4 '-(CH2)2-O-2 ') BNA, amino oxygen base (4 '-CH2-O-N (R)-2 ') BNA and oxygen base amino (4 '-CH2-N (R)-O-2 ') BNA.In certain embodiments, the monomer in pterion comprises in 2 ' position and is selected from following substituent group: pi-allyl, amino, azido, thio group, O-pi-allyl, O-C1-C10Alkyl ,-OCF3, O-(CH2)2-O-CH3, 2 '-O (CH2)2SCH3, O-(CH2)2-O-N (Rm) (Rn) and O-CH2-C (=O)-N (Rm) (Rn), each R whereinmAnd RnIndependent is H or substituted or unsubstituted C1-C10Alkyl.In certain embodiments, the monomer in pterion is 2 ' MOE nucleotide.
In certain embodiments, the short antisense compounds of targeting SOD1 nucleic acid comprises between 5 ' pterion and 3 ' pterion at interval.In certain embodiments, comprise 5,6,7,8,9,10,11,12,13 or 14 monomers at interval.In certain embodiments, Jian Ge monomer is not modified deoxyribonucleotide.In certain embodiments, Jian Ge monomer is not modified ribonucleotide.In certain embodiments, modify (if any) at interval and cause producing such antisense compounds, when in conjunction with its target nucleic acids, this chemical compound can be supported the cutting of RNA enzyme (including but not limited to RNA enzyme H).
In certain embodiments, the short antisense compounds of targeting SOD1 nucleic acid has the same Dan Julian key.In some this embodiment, these keys all are that thiophosphate connects key.In certain embodiments, Lian Jian is that di-phosphate ester connects key.In certain embodiments, the short antisense compounds of targeting SOD1 nucleic acid has mixed matrix.
In certain embodiments, its length of short antisense compounds of targeting SOD1 nucleic acid is 8 monomers.In certain embodiments, its length of short antisense compounds of targeting SOD1 nucleic acid is 9 monomers.In certain embodiments, its length of short antisense compounds of targeting SOD1 nucleic acid is 10 monomers.In certain embodiments, its length of short antisense compounds of targeting SOD1 nucleic acid is 11 monomers.In certain embodiments, its length of short antisense compounds of targeting SOD1 nucleic acid is 12 monomers.In certain embodiments, its length of short antisense compounds of targeting SOD1 nucleic acid is 13 monomers.In certain embodiments, its length of short antisense compounds of targeting SOD1 nucleic acid is 14 monomers.In certain embodiments, its length of short antisense compounds of targeting SOD1 nucleic acid is 15 monomers.In certain embodiments, its length of short antisense compounds of targeting SOD1 nucleic acid is 16 monomers.In certain embodiments, the short antisense compounds of targeting SOD1 nucleic acid comprises 9-15 monomer.In certain embodiments, the short antisense compounds of targeting SOD1 nucleic acid comprises 10-15 monomer.In certain embodiments, the short antisense compounds of targeting SOD1 nucleic acid comprises 12-14 monomer.In certain embodiments, the short antisense compounds of targeting SOD1 nucleic acid comprises 12-14 nucleotide or nucleoside.
In certain embodiments, the invention provides the method for the expression of regulating SOD1.In certain embodiments, this method comprises the short antisense compounds that uses one or more targeting SOD1 nucleic acid, and wherein the short antisense compounds of this targeting SOD1 nucleic acid is about 8 to about 16, preferably 9-15, more preferably 9-14, more preferably 10-14 monomer (promptly about 8 monomer to about 16 connections).Those of ordinary skills will appreciate that, this comprises the method that the short antisense compounds that uses one or more 8,9,10,11,12,13,14,15 or 16 monomeric targeting SOD1 nucleic acid is regulated the expression of SOD1.
In certain embodiments, the method for adjusting SOD1 comprises that using length is the short antisense compounds of 8 monomeric targeting SOD1 nucleic acid.In certain embodiments, the method for adjusting SOD1 comprises that using length is the short antisense compounds of 9 monomeric targeting SOD1 nucleic acid.In certain embodiments, the method for adjusting SOD1 comprises that using length is the short antisense compounds of 10 monomeric targeting SOD1 nucleic acid.In certain embodiments, the method for adjusting SOD1 comprises that using length is the short antisense compounds of 11 monomeric targeting SOD1 nucleic acid.In certain embodiments, the method for adjusting SOD1 comprises that using length is the short antisense compounds of 12 monomeric targeting SOD1 nucleic acid.In certain embodiments, the method for adjusting SOD1 comprises that using length is the short antisense compounds of 13 monomeric targeting SOD1 nucleic acid.In certain embodiments, the method for adjusting SOD1 comprises that using length is the short antisense compounds of 14 monomeric targeting SOD1 nucleic acid.In certain embodiments, the method for adjusting SOD1 comprises that using length is the short antisense compounds of 15 monomeric targeting SOD1 nucleic acid.In certain embodiments, the method for adjusting SOD1 comprises that using length is the short antisense compounds of 16 monomeric targeting SOD1 nucleic acid.
In certain embodiments, the method for the expression of adjusting SOD1 comprises that use comprises the short antisense compounds of 9-15 monomeric targeting SOD1 nucleic acid.In certain embodiments, the method for the expression of adjusting SOD1 comprises that use comprises the short antisense compounds of 10-15 monomeric targeting SOD1 nucleic acid.In certain embodiments, the method for the expression of adjusting SOD1 comprises that use comprises the short antisense compounds of 12-14 monomeric targeting SOD1 nucleic acid.In certain embodiments, the method for the expression of adjusting SOD1 comprises the short antisense compounds that uses the targeting SOD1 nucleic acid that comprises 12-14 nucleotide or nucleoside.
5.CRP
CRP (also claiming c-proteins C reactive and PTX1) is the multiple inflammatory cytokine of response and essential people's acute phase reactant of producing in liver.This protein of identifying as far back as nineteen thirty is high conservative, it is believed that it is the early stage indication of infectiousness or inflammatory disease.Plasma C RP level can respond infection, ischemia, wound, burn and inflammatory disease and increase by 1,000 times.In the patient accepts clinical trial that lipid reduces therapy (as the inhibin therapy), prove, the patient that LDL-C and CRP all reduce with only have LDL-C to reduce the patient to compare the risk mitigation of future development coronary event.
Definition
" CRP " means its expression and treats by lacking gene outcome or the protein that antisense compounds is regulated.
" CRP nucleic acid " means the nucleic acid of any coding CRP.For example, in certain embodiments, CRP nucleic acid include but not limited to the to encode DNA sequence of CRP, the RNA sequence of transcribing from the DNA of coding CRP and the mRNA of coding CRP.
" CRP mRNA " means the mRNA of coding CRP.
CRP treats indication
In certain embodiments, the invention provides the method for the CRP expression of regulating in the individuality, described method comprises that the short antisense compounds with targeting CRP nucleic acid gives this individuality.In certain embodiments, the invention provides the individual method of treatment, described method comprises and gives the pharmaceutical composition that one or more comprise the short antisense compounds of targeting CRP nucleic acid.In certain embodiments, this individuality suffers from hypercholesterolemia, non-familial hypercholesterolemia, familial hypercholesterolemia, heterozygous familial hypercholesterolemia, the familial hypercholesterolemia that isozygotys, Combination dyslipidemia, atherosclerosis, the atherosclerotic risk of development, coronary heart disease, coronary disease medical history, early show effect coronary heart disease, one or more coronary heart disease risk factors.In certain embodiments, this individuality suffers from acute coronary syndrome, blood vessel injury, arterial occlusion, unstable angina pectoris, back (post) peripheral blood vessel, back myocardial infarction (MI), thrombosis, deep venous thrombosis, end-stage renal disease (ESRD), chronic renal failure, complement activation, congestive heart failure or systemic vasculitis.In certain embodiments, this individuality suffers from apoplexy.
In certain embodiments, this individuality has carried out being selected from the operation of the implantation of optional (elective) support, angioplasty, back Percutaneous Transluminal Angioplasty (PTCA), heart transplantation, kidney dialysis or cardiopulmonary bypass.
In certain embodiments, this individuality suffers from inflammatory diseases.In some this embodiment, inflammatory diseases is selected from inflammatory bowel, ulcerative colitis, rheumatoid arthritis or osteoarthritis.
The guilding principle that lipid reduces therapy by u.s. national cholesterol education program (NCEP) adult treatment expert scheme III (ATPIII) in calendar year 2001 set up and upgraded in 2004 (Grundyet al., Circulation, 2004,110,227-239).This guilding principle comprises acquisition complete lipoprotein general picture (profile) after fasting in 9-12 hour usually, to determine LDL-C, T-CHOL and HDL-C level.According to the guilding principle of up-to-date formulation, 130-159mg/dL, 160-189mg/dL and think critical height, height and high level respectively more than or equal to the LDL-C level of 190mg/dL.200-239mg/dL and think critical height and high level respectively more than or equal to the total cholesterol level of 240mg/dL.HDL-C level less than 40mg/dL is thought low-level.
In certain embodiments, this individuality has been confirmed as carrying out lipid reduction therapy.In some this embodiment, according to upgrading (Grundyet al. in calendar year 2001 foundation and in 2004 by u.s. national cholesterol education program (NCEP) adult treatment expert scheme III (ATPIII), Circulation, 2004,110, guilding principle 227-239), this individuality have been confirmed as carrying out lipid and have reduced therapy.In certain embodiments, need carry out its LDL-C of this individuality that lipid reduces therapy and be higher than 190mg/dL.In certain embodiments, need carry out its LDL-C of this individuality that lipid reduces therapy and be higher than 160mg/dL.In certain embodiments, need carry out its LDL-C of this individuality that lipid reduces therapy and be higher than 130mg/dL.In certain embodiments, need carry out its LDL-C of this individuality that lipid reduces therapy and be higher than 100mg/dL.In some this embodiment, this individuality that need carry out lipid reduction therapy should keep LDL-C to be lower than 160mg/dL.In some this embodiment, this individuality that need carry out lipid reduction therapy should keep LDL-C to be lower than 130mg/dL.In some this embodiment, this individuality that need carry out lipid reduction therapy should keep LDL-C to be lower than 100mg/dL.In some this embodiment, this individuality should keep LDL-C to be lower than 70mg/dL.
In certain embodiments, the invention provides the method that reduces the CRP in the individuality.In some this embodiment, CRP is reduced at least 10%, at least 15%, at least 20%, at least 25%, at least 30%, at least 35%, at least 40%, at least 45%, at least 50%, at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95% and at least 100%.
In certain embodiments, method provided by the invention does not reduce HDL-C.In certain embodiments, method provided by the invention does not cause the accumulation of lipid in liver.In certain embodiments, method provided by the invention does not cause fatty degeneration of liver.
In certain embodiments, can reduce again and the method for the treatment of relevant side effect when the invention provides CRP concentration in reducing the experimenter.In some this embodiment, side effect is a liver toxicity.In some this embodiment, side effect is an abnormal liver function.In some this embodiment, side effect is that alanine aminotransferase (ALT) raises.In some this embodiment, side effect is that aspartate aminotransferase (AST) raises.
In certain embodiments, the invention provides the method that reduces the CRP concentration among the experimenter not have to reach target LDL-C level because of lipid reduction therapy.In some this embodiment, the short antisense compounds of targeting CRP nucleic acid is that the unique lipid that gives the experimenter reduces medicament.In some this embodiment, experimenter's lipid that acceptance (comply with) recommended of not following the doctor's advice as yet reduces therapy.In some this embodiment, pharmaceutical composition of the present invention reduces therapy with in addition different lipid and gives altogether together.In some this embodiment, it is the LDL-Apheresis that other lipid reduces therapy.In some this embodiment, it is inhibin that other lipid reduces therapy.In some this embodiment, it is according to Ezetimibe that other lipid reduces therapy.
In certain embodiments, the invention provides the method for the CRP concentration among the experimenter that reduction do not tolerate inhibin.In some this embodiment, because given inhibin, experimenter's creatine kinase concentration improves.In some this embodiment, because given inhibin, experimenter's abnormal liver function.In some this embodiment, because given inhibin, experimenter's myalgia.In some this embodiment, because given inhibin, the side effect of experimenter's center of origin nervous system.In certain embodiments, experimenter's inhibin of accepting to be recommended of not following the doctor's advice as yet gives.
In certain embodiments, the invention provides the method that reduces the coronary heart disease risk among the experimenter.In certain embodiments, the invention provides the method for the atherosclerotic progress among the experimenter that slows down.In some this embodiment, the invention provides the method that stops the atherosclerotic progress among the experimenter.In some this embodiment, the invention provides the size of the atherosclerotic plaque that reduces among the experimenter and/or the method for diffusion.In certain embodiments, the method that is provided can reduce the experimenter and develop atherosclerotic risk.
In certain embodiments, the method that is provided can be improved the cardiovascular consequence among the experimenter.In some this embodiment, the improvement of cardiovascular consequence is that the risk of development coronary heart disease reduces.In some this embodiment, the improvement of cardiovascular consequence is the reduction of the incidence rate of one or more main cardiovascular events, and described incident includes but not limited to death, myocardial infarction, infraction, apoplexy, cardiogenic shock, pulmonary edema, cardiac arrest and atrial arrhythmia again.In some this embodiment, the improvement of cardiovascular consequence is confirmed by the improvement of carotid intimal medial thickness.In some this embodiment, the improvement of carotid intimal medial thickness is the reduction of thickness.In some this embodiment, the improvement of carotid intimal medial thickness is preventing of media thickness increase.
In certain embodiments, the pharmaceutical composition that comprises the short antisense compounds of targeting CRP nucleic acid is for using in treatment.In certain embodiments, described treatment is the reduction of the CRP in the individuality.In certain embodiments, described treatment is to following treatment of diseases: hypercholesterolemia, non-familial hypercholesterolemia, familial hypercholesterolemia, heterozygous familial hypercholesterolemia, the familial hypercholesterolemia that isozygotys, Combination dyslipidemia, atherosclerosis, the atherosclerotic risk of development, coronary heart disease, coronary disease medical history or the coronary heart disease of early showing effect.In certain embodiments, described treatment is the reduction of CRP risk.In certain embodiments, described treatment is atherosclerotic prevention.In certain embodiments, described treatment is the prevention of coronary heart disease.In certain embodiments, described treatment is to following treatment of diseases: acute coronary syndrome, chronic renal failure, blood vessel injury, arterial occlusion, atherosclerosis thrombosis, unstable angina pectoris, back (post) peripheral blood vessel, back myocardial infarction (MI), thrombosis, deep venous thrombosis, end-stage renal disease (ESRD), complement activation, congestive heart failure or systemic vasculitis.In certain embodiments, described treatment is to having carried out being selected from the implantation of optional (elective) support, angioplasty, the treatment of the individuality of the operation of Percutaneous Transluminal Angioplasty (PTCA), heart transplantation, kidney dialysis or cardiopulmonary bypass afterwards.In certain embodiments, described treatment is the treatment to inflammatory diseases.
In certain embodiments, the pharmaceutical composition that will comprise the short antisense compounds of targeting CRP nucleic acid is used for preparing the medicine in order to the CRP that reduces individuality.In certain embodiments, the pharmaceutical composition that will comprise the short antisense compounds of targeting CRP nucleic acid is used to prepare in order to reduce the medicine of coronary heart disease risk.In certain embodiments, the short antisense compounds with targeting CRP nucleic acid is used to prepare in order to treat the medicine of following disease: hypercholesterolemia, non-familial hypercholesterolemia, familial hypercholesterolemia, heterozygous familial hypercholesterolemia, the familial hypercholesterolemia that isozygotys, Combination dyslipidemia, atherosclerosis, the atherosclerotic risk of development, coronary heart disease, coronary disease medical history, early show effect coronary heart disease or one or more coronary heart disease risk factors.
In certain embodiments, the short antisense compounds with targeting CRP nucleic acid is used to prepare in order to treat the medicine of following disease: acute coronary syndrome, chronic renal failure, blood vessel injury, arterial occlusion, atherosclerosis thrombosis, unstable angina pectoris, back (post) peripheral blood vessel, back myocardial infarction (MI), thrombosis, deep venous thrombosis, end-stage renal disease (ESRD), complement activation, congestive heart failure or systemic vasculitis.In certain embodiments, the short antisense compounds with targeting CRP nucleic acid is used to prepare the medicine of suffering from the individuality of apoplexy in order to treatment.
In certain embodiments, the short antisense compounds of targeting CRP nucleic acid is used for preparation has carried out being selected from the operation of the implantation of optional (elective) support, angioplasty, back Percutaneous Transluminal Angioplasty (PTCA), heart transplantation, kidney dialysis or cardiopulmonary bypass in order to treatment the medicine of individuality.
In certain embodiments, the short antisense compounds with targeting CRP nucleic acid is used to prepare in order to treat the medicine of inflammatory diseases.In certain embodiments, the short antisense compounds with targeting CRP nucleic acid is used to prepare in order to treat the medicine of inflammatory bowel, ulcerative colitis, rheumatoid arthritis or osteoarthritis.
The CRP combination treatment
In certain embodiments, the pharmaceutical composition that one or more is comprised the short antisense compounds of targeting CRP nucleic acid gives altogether with one or more other medicament.In certain embodiments, described one or more other medicament is that lipid reduces medicament.In certain embodiments, described one or more other medicament be designed to its disease for the treatment of or disease identical with described one or more pharmaceutical compositions of the present invention.In certain embodiments, described one or more other medicament be designed to its disease for the treatment of or disease different with described one or more pharmaceutical compositions of the present invention.In certain embodiments, described one or more other medicament is designed to treat the ill effect of one or more pharmaceutical compositions of the present invention.In certain embodiments, one or more pharmaceutical compositions of the present invention are given altogether with another medicament, to treat the ill effect of this another medicament.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is given simultaneously.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is given at different time.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is prepared together in single dosage form.In certain embodiments, with other separately preparation of medicament of one or more pharmaceutical compositions of the present invention and one or more.
In certain embodiments, the medicament that can give altogether with the pharmaceutical composition of the short antisense compounds that comprises targeting CRP nucleic acid comprises that lipid reduces medicament.In some this embodiment, can include but not limited to atorvastatin, simvastatin, rosuvastatin with the medicament that pharmaceutical composition of the present invention gives altogether and according to Ezetimibe.In some this embodiment, lipid is reduced medicament give before the pharmaceutical composition of the present invention giving.In some this embodiment, lipid is reduced medicament after giving pharmaceutical composition of the present invention, give.In some this embodiment, lipid is reduced medicament when giving pharmaceutical composition of the present invention, give.In some this embodiment, the dosage that the lipid that gives altogether reduces medicament is identical with the dosage that gives separately to be given when lipid reduces medicament.In some this embodiment, the dosage that the lipid that gives altogether reduces medicament is lower than the dosage that is given when giving lipid reduction medicament separately.In some this embodiment, the dosage that the lipid that gives altogether reduces medicament is higher than the dosage that is given when giving lipid reduction medicament separately.
In certain embodiments, it is the HMG-CoA reductase inhibitor that the lipid that gives altogether reduces medicament.In some this embodiment, the HMG-CoA reductase inhibitor is an inhibin.In some this embodiment, inhibin is selected from atorvastatin, simvastatin, pravastatin, fluvastatin and rosuvastatin.
In certain embodiments, it is ISIS 301012 that the lipid that gives altogether reduces medicament.
In certain embodiments, it is cholesterol absorption inhibitor that the lipid that gives altogether reduces medicament.In some this embodiment, cholesterol absorption inhibitor is according to Ezetimibe.
In certain embodiments, it is HMG-CoA reductase inhibitor and cholesterol absorption inhibitor formulated together altogether that the lipid that gives altogether reduces medicament.In some this embodiment, it is according to Ezetimibe/simvastatin that lipid formulated together altogether reduces medicament.
In certain embodiments, it is microsomal triglyceride transfer protein inhibitor (MTP inhibitor) that the lipid that gives altogether reduces medicament.
In certain embodiments, the medicament that gives altogether is a bile acid chelating agent.In some this embodiment, bile acid chelating agent is selected from colestyramine, colestipol and colesevelam.
In certain embodiments, the medicament that gives altogether is a nicotinic acid.In some this embodiment, nicotinic acid is selected from rapid release nicotinic acid, extended release nicotinic acid and slow release nicotinic acid.
In certain embodiments, the medicament that gives altogether is a Carboxymethylcellulose.In some this embodiment, Carboxymethylcellulose is selected from gemfibrozil, fenofibrate, chlorine Bei Te, bezafibrate and ciprofibrate.
More examples of the medicament that can give altogether with the pharmaceutical composition of the short antisense compounds that comprises targeting CRP nucleic acid include but not limited to corticosteroid (including but not limited to prednisone); Immunoglobulin (includes but not limited to vein immunoglobulin (IVIg); Analgesic (for example acetaminophen); Antiinflammatory (including but not limited to NSAID (non-steroidal anti-inflammatory drug) (for example ibuprofen, COX-1 inhibitor and cox 2 inhibitor)); Salicylate; Antibiotic; Antiviral agent; Antifungal; Antidiabetic medicine (for example biguanide, glucosidase inhibitor, insulin, sulfonylureas and thiazolidinediones); The adrenergic modulation agent; Diuretic; Hormone (for example short anabolism steroid, androgen, estrogen, calcitonin, progesterone, somatostatin and thyroxin); Immunomodulator; Muscle relaxant; Hydryllin; Osteoporosis medicament (for example diphosphonate, calcitonin and estrogen); Prostaglandin; Antineoplastic agent; The spiritual healing medicament; Tranquilizer; Poison Oak Tree (oak) or black poison wood (sumac) product; Antibody and vaccine.
In certain embodiments, the pharmaceutical composition that comprises the short antisense compounds of targeting CRP nucleic acid can be reduced therapy in conjunction with lipid gives.In some this embodiment, it is that curative life style changes that lipid reduces therapy.In some this embodiment, it is the LDL Apheresis that lipid reduces therapy.
The short antisense compounds of some targeting CRP nucleic acid
In certain embodiments, lacking the antisense compounds targeting hasThe CRP nucleic acid of the sequence of searching number NM_000567.1 (being incorporated herein) with SEQ ID NO:6.In some this embodiment, short antisense compounds and the SEQ IDNO:6 of targeting SEQ ID NO:6 have at least 90% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:6 of targeting SEQ ID NO:6 have at least 95% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:6 of targeting SEQ ID NO:6 have 100% complementarity.In certain embodiments, the short antisense compounds of targeting SEQ ID NO:6 comprises the nucleotide sequence that is selected from the nucleotide sequence that provides in the table 9.
The nucleotide sequence that each SEQ ID NO provides in the table 9 is independent of any to connecting the modification of key or nuclear base between sugar moieties, nucleoside.Thus, the defined short antisense compounds of certain SEQ ID NO can comprise one or more to connecting the modification of key or nuclear base between sugar moieties, nucleoside independently.Isis number (Isis NO.) described antisense compounds represented the nuclear base sequence with one or more to connecting key between sugar moieties, nucleoside or examining the combination of the modification of base.
Table 9 has been enumerated the example of the short antisense compounds of targeting SEQ ID NO:6.Table 9 has been enumerated the short antisense compounds that 100% complementarity is arranged with SEQ ID NO:6.The file that is marked with " gapmer die body " is represented the pterion of each short antisense compounds-at interval-pterion die body.Spacer segment comprises 2 '-deoxyribonucleotide, and each nucleotide of each pterion section comprises the sugar through 2 '-modification.The concrete sugar through 2 '-modification is also represented in " gapmer die body " file.For example, " 2-10-2 MOE " means 2-10-2 gapmer die body, and wherein the spacer segment both sides of 10 2 '-deoxyribonucleotides are connected to the pterion section of 2 nucleotide, and wherein the nucleotide of pterion section is 2 '-MOE nucleotide.Connecting key between nucleoside is thiophosphate.Short antisense compounds comprises the 5-methylcytidine that substitutes not modified cytosine, unless show " not modified cytosine " in the gapmer die body file, represented in this case cytosine is not modified cytosine.For example, " 5-mC is only in the interval " expression spacer segment has the 5-methylcytidine, and the pterion section has not modified cytosine.
In certain embodiments, the short antisense compounds of targeting CRP nucleic acid can have short antisense compounds characteristic or feature any or that multiple this paper summarized.In certain embodiments, the short antisense compounds of targeting CRP nucleic acid has and is selected from following die body (pterion-deoxidation interval-pterion): 1-12-1,1-1-10-2,2-10-1-1,3-10-3,2-10-3,2-10-2,1-10-1,1-10-2,3-8-3,2-8-2,1-8-1,3-6-3 or 1-6-1, more preferably 1-10-1,2-10-2,3-10-3 and 1-9-2.
Table 9: the short antisense compounds of targeting SEQ ID NO:6
| ISIS NO. | 5 ' target site | 3 ' target site | Sequence (5 '-3 ') | The Gapmer die body | Seq ID NO |
| 353506 | 1257 | 1272 | ACTCTGGACCCAAACC | 3-10-3 MOE | 409 |
| 353507 | 1258 | 1271 | CTCTGGACCCAAAC | 2-10-2 MOE | 410 |
| 353484 | 1305 | 1320 | CCATTTCAGGAGACCT | 3-10-3 MOE | 411 |
| 353485 | 1306 | 1319 | CATTTCAGGAGACC | 2-10-2 MOE | 412 |
In certain embodiments, the target zone is the nucleotide 1305-1320 of NM_000567.1.In some this embodiment, the short antisense compounds of the nucleotide 1305-1320 of targeting NM_000567.1 comprises the nucleotide sequence that is selected from SEQ ID NO:1305 or 1306.In some this embodiment, the short antisense compounds of the nucleotide 263-278 of targeting NM_000567.1 is selected from Isis NO.353484 or 353485.
In certain embodiments, the target zone is the nucleotide 1257-1272 of NM_000567.1.In some this embodiment, the short antisense compounds of the nucleotide 1257-1272 of targeting NM_000567.1 comprises the nucleotide sequence that is selected from SEQ ID NO 1257 or 1258.In some this embodiment, the short antisense compounds of the nucleotide 428-483 of targeting NM_000567.1 is selected from Isis NO.353506 or 353507.
In certain embodiments, its length of short antisense compounds of targeting CRP nucleic acid is 8-16, preferred 9-15, more preferably 9-14, more preferably 10-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting CRP nucleic acid is 9-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting CRP nucleic acid is 10-14 nucleotide.In certain embodiments, this short antisense compounds is short antisense oligonucleotide.
In certain embodiments, the short antisense compounds of targeting CRP nucleic acid is short gapmer.In some this embodiment, comprise at least one high-affinity in the short gapmer of targeting CRP nucleic acid one or more pterions therein and modify.In certain embodiments, the short antisense compounds of targeting CRP nucleic acid comprises 1-3 high-affinity modification in each pterion.In some this embodiment, the nucleoside in pterion or nucleotide comprise 2 ' and modify.In some this embodiment, the monomer in pterion is BNA.In some this embodiment, the monomer in pterion is selected from α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA, β-D-methylene oxygen base (4 '-CH2-O-2 ') BNA, ethyleneoxy group (4 '-(CH2)2-O-2 ') BNA, amino oxygen base (4 '-CH2-O-N (R)-2 ') BNA and oxygen base amino (4 '-CH2-N (R)-O-2 ') BNA.In certain embodiments, the monomer in pterion comprises in 2 ' position and is selected from following substituent group: pi-allyl, amino, azido, thio group, O-pi-allyl, O-C1-C10Alkyl ,-OCF3, O-(CH2)2-O-CH3, 2 '-O (CH2)2SCH3, O-(CH2)2-O-N (Rm) (Rn) and O-CH2-C (=O)-N (Rm) (Rn), each R whereinmAnd RnIndependent is H or substituted or unsubstituted C1-C10Alkyl.In certain embodiments, the monomer in pterion is 2 ' MOE nucleotide.
In certain embodiments, the short antisense compounds of targeting CRP nucleic acid comprises between 5 ' pterion and 3 ' pterion at interval.In certain embodiments, comprise 5,6,7,8,9,10,11,12,13 or 14 monomers at interval.In certain embodiments, Jian Ge monomer is not modified deoxyribonucleotide.In certain embodiments, Jian Ge monomer is not modified ribonucleotide.In certain embodiments, modify (if any) at interval and cause producing such antisense compounds, when in conjunction with its target nucleic acids, this chemical compound can be supported the cutting of RNA enzyme (including but not limited to RNA enzyme H).
In certain embodiments, the short antisense compounds of targeting CRP nucleic acid has the same Dan Julian key.In some this embodiment, these keys all are that thiophosphate connects key.In certain embodiments, Lian Jian is that di-phosphate ester connects key.In certain embodiments, the short antisense compounds of targeting CRP nucleic acid has mixed matrix.
In certain embodiments, its length of short antisense compounds of targeting CRP nucleic acid is 8 monomers.In certain embodiments, its length of short antisense compounds of targeting CRP nucleic acid is 9 monomers.In certain embodiments, its length of short antisense compounds of targeting CRP nucleic acid is 10 monomers.In certain embodiments, its length of short antisense compounds of targeting CRP nucleic acid is 11 monomers.In certain embodiments, its length of short antisense compounds of targeting CRP nucleic acid is 12 monomers.In certain embodiments, its length of short antisense compounds of targeting CRP nucleic acid is 13 monomers.In certain embodiments, its length of short antisense compounds of targeting CRP nucleic acid is 14 monomers.In certain embodiments, its length of short antisense compounds of targeting CRP nucleic acid is 15 monomers.In certain embodiments, its length of short antisense compounds of targeting CRP nucleic acid is 16 monomers.In certain embodiments, the short antisense compounds of targeting CRP nucleic acid comprises 9-15 monomer.In certain embodiments, the short antisense compounds of targeting CRP nucleic acid comprises 10-15 monomer.In certain embodiments, the short antisense compounds of targeting CRP nucleic acid comprises 12-14 monomer.In certain embodiments, the short antisense compounds of targeting CRP nucleic acid comprises 12-14 nucleotide or nucleoside.
In certain embodiments, the invention provides the method for the expression of regulating CRP.In certain embodiments, this method comprises the short antisense compounds that uses one or more targeting CRP nucleic acid, and wherein the short antisense compounds of this targeting CRP nucleic acid is about 8 to about 16, preferably 9-15, more preferably 9-14, more preferably 10-14 monomer (promptly about 8 monomer to about 16 connections).Those of ordinary skills will appreciate that, this comprises the method that the short antisense compounds that uses one or more 8,9,10,11,12,13,14,15 or 16 monomeric targeting CRP nucleic acid is regulated the expression of CRP.
In certain embodiments, the method for adjusting CRP comprises that using length is the short antisense compounds of 8 monomeric targeting CRP nucleic acid.In certain embodiments, the method for adjusting CRP comprises that using length is the short antisense compounds of 9 monomeric targeting CRP nucleic acid.In certain embodiments, the method for adjusting CRP comprises that using length is the short antisense compounds of 10 monomeric targeting CRP nucleic acid.In certain embodiments, the method for adjusting CRP comprises that using length is the short antisense compounds of 11 monomeric targeting CRP nucleic acid.In certain embodiments, the method for adjusting CRP comprises that using length is the short antisense compounds of 12 monomeric targeting CRP nucleic acid.In certain embodiments, the method for adjusting CRP comprises that using length is the short antisense compounds of 13 monomeric targeting CRP nucleic acid.In certain embodiments, the method for adjusting CRP comprises that using length is the short antisense compounds of 14 monomeric targeting CRP nucleic acid.In certain embodiments, the method for adjusting CRP comprises that using length is the short antisense compounds of 15 monomeric targeting CRP nucleic acid.In certain embodiments, the method for adjusting CRP comprises that using length is the short antisense compounds of 16 monomeric targeting CRP nucleic acid.
In certain embodiments, the method for the expression of adjusting CRP comprises that use comprises the short antisense compounds of 9-15 monomeric targeting CRP nucleic acid.In certain embodiments, the method for the expression of adjusting CRP comprises that use comprises the short antisense compounds of 10-15 monomeric targeting CRP nucleic acid.In certain embodiments, the method for the expression of adjusting CRP comprises that use comprises the short antisense compounds of 12-14 monomeric targeting CRP nucleic acid.In certain embodiments, the method for the expression of adjusting CRP comprises the short antisense compounds that uses the targeting CRP nucleic acid that comprises 12-14 nucleotide or nucleoside.
6. glycocorticosteroid receptor (GCCR)
Glucocorticoid is to obtain one of steroid hormone of identifying the earliest, be responsible for different physiological roles, including but not limited to the synthetic inhibition of inhibition, cytokine of the sedimentary increase of reduction, glycogen, immunity and the inflammatory reaction of glucose uptake and utilization in the stimulation, surrounding tissue of glyconeogenesis and the acceleration of various growth incidents.Glucocorticoid for resist stress particular importance also.The rising synthetic and that discharge of the glucocorticoid of stress-induced can cause various replying, comprise the increase that increase, the inhibition of inflammatory mediator, the synthetic inhibition of cytokine and the glucose of ventricle workload produce (Karin, Cell, 1998,93,487-490).
Natural glucocorticoid and their synthesis of derivatives all are to apply its effect by glycocorticosteroid receptor, and this receptor is the omnipresence express cell matter member of the nuclear hormone superfamily of receptor.People's glycocorticosteroid receptor also claims nuclear receptor superfamily 3, group C, and the member 1; NR3C1; GCCR; GCR; GRL; Glycocorticosteroid receptor, lymphocyte.Its gene is positioned on the human chromosome 5q11-q13, forms (Encio andDetera-Wadleigh, J Biol Chem, 1991,266,7182-7188 by 9 exons; Gehring et al., Proc Natl Acad Sci USA, 1985,82,3751-3755).Exist people's glycocorticosteroid receptor mRNA of various ways: the 5.5kb people's glycocorticosteroid receptor α cDNA that contains exons 1-8 and exon 9 α; The 4.3kb people's glycocorticosteroid receptor β cDNA that contains exons 1-8 and exon 9 β; With the 7.0kb people's glycocorticosteroid receptor α cDNA that contains exons 1-8 and whole exon 9, it comprises exon 9 α, exon 9 β and " J district ", and " J district " flank is exon 9 α and 9 β (Hollenberg et al., Nature, 1985,318,635-641; Oakley et al., J Biol Chem, 1996,271,9550-9559).People's glycocorticosteroid receptor α is the main isotype of receptor, be show steroid in conjunction with active isotype (Hollenberg et al., Nature, 1985,318,635-641).In addition, by using three different promoteres, can transcribe out three different exons 1 variants, the alternately montage of an exons 1 variant can cause producing three different editions of this exon.Therefore, people's glycocorticosteroid receptor mRNA can contain 5 different editions exons 1 (Breslin et al., MolEndocrinol, 2001,15,1381-1395).
Research to the expression pattern of the α of people's glycocorticosteroid receptor mRNA and β isotype discloses, and the expression of α isotype is horn of plenty more.Two kinds of isotypes comprise lung, kidney, heart, liver, skeletal muscle, macrophage, neutrophil cell and peripheral blood lymphocytes all similarly expressing in tissue and the cell type.Only there is people's glycocorticosteroid receptor α in colon, to express.On protein level, be subjected to all to detect the α isotype in the inspection tissue at all, and the β isotype can not detect, this prompting is under physiological condition, the montage approach of acquiescence is approach α isotype (Pujols et al., Am J Physiol Cell Physiol, 2002 that produce, 283, C1324-1331).The β isotype of glycocorticosteroid receptor is neither in conjunction with the glucocorticoid agonist, also not in conjunction with the glucocorticoid antagonist.In addition, the β isotype mainly is positioned in the nucleus of transfected cell, does not rely on hormonal stimulation.When two kinds of isotypes are all expressed in same cell, the gene expression that inhibitory hormone is inductive, glycocorticosteroid receptor is alpha mediated of glycocorticosteroid receptor β energy stimulates, this prompting β isotype plays effect (the Oakley et al. of the inhibitor of glycocorticosteroid receptor alpha active, J Biol Chem, 1996,271,9550-9559).Unless otherwise, otherwise people's glycocorticosteroid receptor described herein is defined as the omnipresence product of the gene that is positioned on the chromosome 5q11-q13.
Transfection the cell line of complementary glycocorticosteroid receptor antisense RNA chain, demonstrate that glycocorticosteroid receptor mRNA level reduces and glycocorticosteroid receptor agonist dexamethasone replied reduction (Pepin and Barden, Mol Cell Biol, 1991,11,1647-1653).The transgenic mice that carries antisense glycocorticosteroid receptor gene constructs be used to study glucocorticoid to the feedback effect of hypothalmus-pituitary-adrenal axis (Pepin etal., Nature, 1992,355,725-728).In another research to similar genetically engineered mice, caloric intake and expenditure, heart and vastus lateralis lipoprotein lipase activity and heart and brown adipose tissue norepinephrine are all compared according to mice low.On the contrary, fat content and total body energy comparison are significantly much higher according to mice.These results suggest, defective glycocorticosteroid receptor west is carried can influence the energy balance by increasing energy efficiency, and these results have given prominence to regulating action (the Richard et al. of hypothalmus-pituitary-adrenal axis variation to the muscle lipoprotein lipase activity, Am J Physiol, 1993,265, R146-150).
Assess in the animal model of anxiety, learning and memory power being designed, measured the influence to behavior of glycocorticosteroid receptor antagonist.The minimizing that glycocorticosteroid receptor is expressed in the rat of the antisense oligodeoxyribonucleotide of long-term Intraventricular infusion targeting glycocorticosteroid receptor mRNA, do not disturb space in the Morris water maze laboratory (the Engelmann et al. that cruises, Eur J Pharmacol, 1998,361,17-26).The antisense oligodeoxyribonucleotide of bilateral infusion targeting glycocorticosteroid receptor mRNA in the dentate gyrus of rat hippocampus, stationarity (immobility) (Korte et al., Eur J Pharmacol, 1996 of rat in the experiment of Porsolt forced swimming have been reduced, 301,19-25).
Glucocorticoid usually is because it uses obtaining such as the immunosuppressant in the treatment of diseases of anaphylaxis, asthma, rheumatoid arthritis, AIDS, systemic lupus erythematosus (sle) and degenerative osteoarthritis, antiinflammatory action.The negative adjusting of gene expression as the negative adjusting that the interaction by glycocorticosteroid receptor and NF-kB causes, it is believed that be the reason of glucocorticoid antiinflammatory action in vivo to small part.These three kinds of cytokines of interleukin-6, tumor necrosis factor and interleukin-1 are the reasons that cause most of hypothalamic-pituitary-adrenals (HPA) axle of inflammation in stress process to stimulate.Hpa axis and systemic sympathetic nerve and adrenal medulla system are the peripheral components of stress response system, be responsible for keeping basic stable state with stress relevant stable state.Glucocorticoid is as the end products of hpa axis, can suppress the generation of all three kinds of inflammatory cytokine, can also suppress their effects to target tissue, exception be interleukin-6, itself and glucocorticoid synergism stimulate the generation of acute phase reactant.The activity of glucocorticoid treatment can reduction hpa axis (Chrousos, N Engl J Med, 1995,332,1351-1362).
In some cases, the patient can resist the glucocorticoid treatment.A reason of the resistance of this a pair of steroid is the sudden change or the pleomorphism that exist in the glycocorticosteroid receptor gene.Be reported in and had 15 missense, 3 nonsenses, 3 frameshit, 1 splice site and 2 road montages sudden change (alternative splice mutation) and 16 relevant (Bray and Cotton of pleomorphism in addition in the NR3C1 gene with the glucocorticoid resistance, Hum Mutat, 2003,21,557-568).The other research of in the mankind, carrying out pointed out positive correlation between the allele of metabolism syndrome incidence rate and progress and glycocorticosteroid receptor (GR) gene (Rosmond, Obes Res, 2002,10,1078-1086).
The glucocorticoid insensitivity of other situations is relevant with the change of the expression of glycocorticosteroid receptor isotype.The research that people's glycocorticosteroid receptor β isotype mRNA among the glucocorticoid resistance ulcerative colitis patient is expressed discloses, the existence of this mRNA is than significantly higher in the responsive patient of glucocorticoid, the expression of this prompter's glycocorticosteroid receptor β mRNA in peripheral blood lymphocytes can be served as predictor (the Honda et al. that the glucocorticoid in the ulcerative colitis is replied, Gastroenterology, 2000,118,859-866).Increase in obviously numerous expression of glucocorticoid also being observed glycocorticosteroid receptor β in insensitive asthmatic patient.In addition, in peripheral blood lymphocytes from insensitive patient's transfection to glucocorticoid, found DNA binding ability unusual of the glycocorticosteroid receptor that causes by cytokine, and the HepG2 cell with glycocorticosteroid receptor β gene has caused remarkable reduction (the Leung et al. of glycocorticosteroid receptor α DNA binding ability, J Exp Med, 1997,186,1567-1574).The dexamethasone combination studies have shown that people's glycocorticosteroid receptor β does not change the affinity of glycocorticosteroid receptor α to the hormone part, but changes its ability in conjunction with GRE (Bamberger et al., J ClinInvest, 1995,95,2435-2441).Generally speaking, these presentation of results, glycocorticosteroid receptor β by with glycocorticosteroid receptor α competition GRE target site, can serve as on the physiology with Pathophysiology on relevant endogenous inhibitor to the glucocorticoid effect.
In liver, the glucocorticoid agonist increases the liver glucose generation by activating glycocorticosteroid receptor, and this can cause the expression of glyconeogenesis enzyme PCK (PEPCK) and G-6-Pase to increase subsequently.By glyconeogenesis, glucose be able to from non-hexose precursor such as lactic acid, acetone acid and alanine form (Link, Curr Opin InvestigDrugs, 2003,4,421-429).Steroid glycocorticosteroid receptor antagonist such as RU 486 in the rodent model of diabetes, have been tested.The mice (being called the db/db mice) that lacks the leptin acceptor gene is obesity in heredity, suffer from diabetes and hyperinsulinemia.It is about 49% to have reduced blood-glucose with the db/db mice of RU 486 treatment hyperglycemia, does not influence plasma insulin level.In addition, compare with untreated mice, expression (the Friedman et al. of glycocorticosteroid receptor response gene PEPCK, G-6-Pase, glucose transporter 2 types and the tyrosine aminotransferase of RU 486 treatments reduction the in the db/db mice, J Biol Chem, 1997,272,31475-31481).RU 486 can also be by reducing diabetes (the Gettys et al. in the ob/ob mouse model that serum insulin and blood glucose levels improve diabetes, obesity and hyperinsulinemia, Int J Obes Relat Metab Disord, 1997,21,865-873).
Because the increase of glyconeogenesis is considered to the main source of the increase that glucose produces in the diabetes, done research to multiple for the treatment target that suppresses the liver glucose generation.Because the antagonist of glycocorticosteroid receptor can improve diabetes in animal model, this chemical compound is one of potential medicine of being sought.But, the glycocorticosteroid receptor antagonist has deleterious systemic effect, comprise hpa axis activation (Link, Curr Opin InvestigDrugs, 2003,4,421-429).The active increase of hpa axis is relevant with the inhibition of immune related inflammation effect, and this suppresses to increase the susceptibility to infectious agent and tumor.The relevant disease of inhibition with the immunomediated inflammatory that causes by the defective in hpa axis or its target tissue, comprise Cushing syndrome, chronic stress, chronic alcoholism and depressive type melancholy (Chrousos, NEngl J Med, 1995,332,1351-1362).Therefore, be opened to liver specificity glycocorticosteroid receptor antagonist and can have value especially.Steroid glycocorticosteroid receptor antagonist and bile acid are puted together, so that with their targeting livers (Apelqvist et al., 2000).The at present known healing potion that does not also have energy targeting glycocorticosteroid receptor and don't unwanted periphery influence occurs (Link, Curr Opin Investig Drugs, 2003,4,421-429).Therefore, to the demand of the medicament that can effectively suppress liver glycocorticosteroid receptor long-term existence still.
Definition
" glycocorticosteroid receptor " is that its expression is treated by lacking gene outcome or the protein that antisense compounds is regulated.Glycocorticosteroid receptor is commonly referred to GCCR.
" GCCR nucleic acid " means the nucleic acid of any coding GCCR.For example, in certain embodiments, GCCR nucleic acid include but not limited to the to encode DNA sequence of GCCR, the RNA sequence of transcribing from the DNA of coding GCCR and the mRNA sequence of coding GCCR." GCCRmRNA " means the mRNA of coding GCCR.
The treatment indication
Antisense technology is the effective means that reduces the expression of specific gene product, therefore can be used for multiple in order in therapeutic, diagnostic and the research application of regulating the glycocorticosteroid receptor expression.In addition, in certain embodiments, liver be give antisense oligonucleotide find to exist one of tissue of maximum concentration (Geary et al., Curr.Opin.Investig.Drugs, 2001,2,562-573).Therefore, the method that in this embodiment, that antisense technology has been represented is noticeable, the liver specificity of glycocorticosteroid receptor is suppressed.
In certain embodiments, the short antisense compounds of the nucleic acid of targeting coding glycocorticosteroid receptor is arrived liver by precedence partition.In certain embodiments, lacking the usefulness that antisense compounds compares with longer parent compound in liver improves.In certain embodiments, target RNA is mainly expressed in liver.
Use for treatment, suffer from the disease that to treat by the expression of regulating GCCR or the experimenter of disease by giving one or more short antisense compounds, treat to suspect.In limiting examples, described method comprises that the short antisense compounds with the treatment effective dose gives the step of animal.Some short antisense compounds can suppress the active of GCCR and/or suppress the expression of GCCR.In certain embodiments, the active or expression of the GCCR among the experimenter is suppressed and reaches at least 10%, at least 20%, at least 25%, at least 30%, at least 40%, at least 50%, at least 60%, at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 98%, at least 99% or 100%.In certain embodiments, the active or expression of the GCCR among the experimenter is suppressed and reaches at least 30%.In certain embodiments, the active or expression of the GCCR among the experimenter is suppressed and reaches at least 50% or more.
The reduction of the expression of GCCR can for example be measured in blood, blood plasma, serum, fatty tissue, liver or any other body fluid, tissue or the organ of this animal.In certain embodiments, contained cell includes the nucleic acid of the GCCR that encodes and/or they contain GCCR albumen itself in the middle of this fluid to be analyzed, tissue or the organ.
Some medicine that comprises short antisense compounds and other compositionss also are provided.In certain embodiments, short antisense compounds is to be added to suitable medicine by certain chemical compound with effective dose can accept diluent or carrier, uses in pharmaceutical composition.
In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid has short antisense compounds characteristic or feature any or that multiple this paper summarized.In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid has and is selected from following die body (pterion-deoxidation interval-pterion): 1-12-1,1-1-10-2,2-10-1-1,3-10-3,2-10-3,2-10-2,1-10-1,1-10-2,3-8-3,2-8-2,1-8-1,3-6-3 or 1-6-1.In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid has and is selected from following die body (pterion-deoxidation interval-pterion): 1-10-1,2-10-2,3-10-3 and 1-9-2.In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid has and is selected from following die body (pterion-deoxidation interval-pterion): 3-10-3,2-10-3,2-10-2,1-10-1,1-10-2,2-8-2,1-8-1,3-6-3 or 1-6-1, more preferably 2-10-2 and 2-8-2.
In certain embodiments, this paper provides by short antisense compounds that gives one or more targeting GCCR nucleic acid or the pharmaceutical composition that comprises this chemical compound and treats individual method.Also provide by the short antisense compounds that gives targeting GCCR nucleic acid and treat the method for suffering from the experimenter of active diseases associated of GCCR or disease.Except diabetes particularly the type ii diabetes, include but not limited to obesity with GCCR diseases associated and disease, metabolic syndrome X, Cushing syndrome, the Ai Dixunshi disease, inflammatory diseases such as asthma, rhinitis and arthritis, anaphylaxis, autoimmune disease, immunodeficiency, anorexia, cachexia, bone loss or bone fragility and wound healing.Metabolic syndrome, metabolic syndrome X or be called for short syndrome X, be meant comprise that obesity, dyslipidemia (particularly high blood triglyceride), glucose do not tolerate, one group of risk factor of hyperglycemia and hypertension.In certain embodiments, the short antisense compounds with targeting GCCR is used for improving the hyperglycemia that is caused by systemic Steroid treatment.In addition, antisense technology provides the means of the expression that suppresses glycocorticosteroid receptor β isotype, and this isotype is proved to be overexpression in the patient who resists the glucocorticoid treatment.
In certain embodiments, the invention provides targeting coding GCCR nucleic acid, can regulate the short antisense compounds of the expression of glycocorticosteroid receptor.Medicine and other compositionss of comprising The compounds of this invention also are provided.The method of regulator of screening glycocorticosteroid receptor and the method for regulating the expression of glycocorticosteroid receptor in cell, tissue or animal are provided in addition, and described method comprises makes described cell, tissue or animal contact with one or multiple The compounds of this invention or compositions.This paper gives treatment and suspects to suffer from or easily suffer from method with the animal (particularly people) of the expression diseases associated or the disease of glycocorticosteroid receptor.This method comprises treatment or prevents one or more The compounds of this invention of effective dose or the people that compositions needs treatment.
The short antisense compounds of some targeting GCCR nucleic acid
In certain embodiments, lacking the antisense compounds targeting has
The GCCR nucleic acid of the sequence of the nucleotide 1-106000 of searching number AC012634 (being incorporated herein) with SEQ ID NO:8.In some this embodiment, short antisense compounds and the SEQ ID NO:8 of targeting SEQ ID NO:8 have at least 90% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:8 of targeting SEQ ID NO:8 have at least 95% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:8 of targeting SEQ ID NO:8 have 100% complementarity.In certain embodiments, the short antisense compounds of targeting SEQ ID NO:8 comprises the nucleotide sequence that is selected from the nucleotide sequence that provides in table 10 and 11.
The nucleotide sequence that each SEQ ID NO provides in the table 10 and 11 is independent of any to connecting the modification of key or nuclear base between sugar moieties, nucleoside.Thus, the defined short antisense compounds of certain SEQ ID NO can comprise one or more to connecting the modification of key or nuclear base between sugar moieties, nucleoside independently.Isis number (Isis NO.) described antisense compounds represented the nuclear base sequence with one or more to connecting key between sugar moieties, nucleoside or examining the combination of the modification of base.
In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid comprises the gapmer die body.In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid comprises 2-10-2 gapmer die body.
Table 10 and 11 has been enumerated the example of the short antisense compounds of targeting SEQ ID NO:8.Table 10 has been enumerated the short antisense compounds that 100% complementarity is arranged with SEQ ID NO:8.Table 11 has been enumerated the short antisense compounds that has one or two mispairing with respect to SEQ ID NO:8.The file that is marked with " gapmer die body " is represented the pterion of each short antisense compounds-at interval-pterion die body.Spacer segment comprises 2 '-deoxyribonucleotide, and each nucleotide of each pterion section comprises the sugar through 2 '-modification.The concrete sugar through 2 '-modification is also represented in " gapmer die body " file.For example, " 2-10-2 MOE " means 2-10-2 gapmer die body, and wherein the spacer segment both sides of 10 2 '-deoxyribonucleotides are connected to the pterion section of 2 nucleotide, and wherein the nucleotide of pterion section is 2 '-MOE nucleotide.Connecting key between nucleoside is thiophosphate.Short antisense compounds comprises the 5-methylcytidine that substitutes not modified cytosine, unless show " not modified cytosine " in the gapmer die body file, represented in this case cytosine is not modified cytosine.For example, " 5-mC is only in the interval " expression spacer segment has the 5-methylcytidine, and the pterion section has not modified cytosine.
Table 10: the short antisense compounds of targeting SEQ ID NO:8
| ISIS NO. | 5 ' target site | 3 ' target site | Sequence (5 '-3 ') | The Gapmer die body | SEQ ID NO |
| 371644 | 88142 | 88155 | TTTGGGAGGTGGTC | 2-10-2 MOE | 413 |
| 371645 | 88156 | 88169 | CACACCAGGCAGAG | 2-10-2 MOE | 414 |
| 371649 | 88212 | 88225 | CTTTACAGCTTCCA | 2-10-2 MOE | 415 |
| 371651 | 88242 | 88255 | CACTACCTTCCACT | 2-10-2 MOE | 416 |
| 371652 | 88248 | 88261 | AACACACACTACCT | 2-10-2 MOE | 417 |
| 371653 | 88256 | 88269 | CTCTTCAAAACACA | 2-10-2 MOE | 418 |
| 371665 | 92037 | 92050 | GTAATTGTGCTGTC | 2-10-2 MOE | 419 |
| 371669 | 92086 | 92099 | TTTTTCTTCGAATT | 2-10-2 MOE | 420 |
| 371671 | 92114 | 92127 | CATTTTCGATAGCG | 2-10-2 MOE | 421 |
| 371673 | 92142 | 92155 | ACCTTCCAGGTTCA | 2-10-2 MOE | 422 |
Table 11: targeting SEQ ID NO:8 and have the short antisense compounds of 1 or 2 mispairing
| ISIS NO | 5 ' target site | 3 ' target site | Sequence (5 '-3 ') | The Gapmer die body | SEQ ID NO |
| 371638 | 2039 | 2052 | ATAGGAAGCATAAA | 2-10-2 MOE | 423 |
| 371650 | 4949 | 4962 | TCTTTTAAAGAAGA | 2-10-2 MOE | 424 |
| 371673 | 10187 | 10200 | ACCTTCCAGGTTCA | 2-10-2 MOE | 422 |
| 371660 | 13465 | 13478 | AAGGATATTTTAAA | 2-10-2 MOE | 425 |
| 371660 | 14428 | 14441 | AAGGATATTTTAAA | 2-10-2 MOE | 425 |
| 371654 | 15486 | 15499 | GAACAAAAATTAAA | 2-10-2 MOE | 427 |
| 371661 | 16638 | 16651 | TTCCACAGATCTGT | 2-10-2 MOE | 428 |
| 371653 | 17892 | 17905 | CTCTTCAAAACACA | 2-10-2 MOE | 418 |
| 371679 | 18444 | 18457 | TTTATAAAGTAAAG | 2-10-2 MOE | 429 |
| 371645 | 19816 | 19829 | CACACCAGGCAGAG | 2-10-2 MOE | 414 |
| 371638 | 21555 | 21568 | ATAGGAAGCATAAA | 2-10-2 MOE | 423 |
| 371650 | 21775 | 21788 | TCTTTTAAAGAAGA | 2-10-2 MOE | 424 |
| 371679 | 21902 | 21915 | TTTATAAAGTAAAG | 2-10-2 MOE | 429 |
| 371655 | 22507 | 22520 | TACTGTGAGAAATA | 2-10-2 MOE | 433 |
| 371655 | 22722 | 22735 | TACTGTGAGAAATA | 2-10-2 MOE | 433 |
| 371672 | 25662 | 25675 | TTCCAGCTTGAAGA | 2-10-2 MOE | 435 |
| 371678 | 25926 | 25939 | GATCAGTTCTCATG | 2-10-2 MOE | 436 |
| 371655 | 26041 | 26054 | TACTGTGAGAAATA | 2-10-2 MOE | 433 |
| 371638 | 29770 | 29783 | ATAGGAAGCATAAA | 2-10-2 MOE | 423 |
| 371668 | 30551 | 30564 | TTATCAATGATGCA | 2-10-2 MOE | 439 |
| 371670 | 40584 | 40597 | GCATGCTGGACAGT | 2-10-2 MOE | 440 |
| 371654 | 43331 | 43344 | GAACAAAAATTAAA | 2-10-2 MOE | 427 |
| 371650 | 46024 | 46037 | TCTTTTAAAGAAGA | 2-10-2 MOE | 424 |
| 371659 | 50372 | 50385 | TTGCACCTGAACTA | 2-10-2 MOE | 443 |
| 371634 | 50565 | 50578 | CAGAATATATTTCT | 2-10-2 MOE | 444 |
| 371673 | 56942 | 56955 | ACCTTCCAGGTTCA | 2-10-2 MOE | 422 |
| 371654 | 62372 | 62385 | GAACAAAAATTAAA | 2-10-2 MOE | 427 |
| 371679 | 63537 | 63550 | TTTATAAAGTAAAG | 2-10-2 MOE | 429 |
| 371654 | 64908 | 64921 | GAACAAAAATTAAA | 2-10-2 MOE | 427 |
| 371661 | 65795 | 65808 | TTCCACAGATCTGT | 2-10-2 MOE | 428 |
| 371645 | 70997 | 71010 | CACACCAGGCAGAG | 2-10-2 MOE | 414 |
| 371661 | 77400 | 77413 | TTCCACAGATCTGT | 2-10-2 MOE | 428 |
| 371663 | 82329 | 82342 | ATAAGAGATTAAAA | 2-10-2 MOE | 450 |
| 371633 | 83426 | 83439 | TCCCCCTTCTCATT | 2-10-2 MOE | 451 |
| 371662 | 85873 | 85886 | GGGCATTGTTAAAA | 2-10-2 MOE | 452 |
| 371654 | 86476 | 86489 | GAACAAAAATTAAA | 2-10-2 MOE | 427 |
| 371679 | 86516 | 86529 | TTTATAAAGTAAAG | 2-10-2 MOE | 429 |
| 371641 | 88097 | 88110 | AGAACTCACATCTG | 2-10-2 MOE | 455 |
| 371642 | 88111 | 88124 | GAGCTGGACGGAGG | 2-10-2 MOE | 456 |
| 371646 | 88170 | 88183 | AAGCTTCATCGGAG | 2-10-2 MOE | 457 |
| 371647 | 88184 | 88197 | ATAATGGCATCCCG | 2-10-2 MOE | 458 |
| 371650 | 88226 | 88239 | TCTTTTAAAGAAGA | 2-10-2 MOE | 424 |
| 371673 | 91493 | 91506 | ACCTTCCAGGTTCA | 2-10-2 MOE | 422 |
| 371664 | 92030 | 92043 | TGCTGTCCTATAAG | 2-10-2 MOE | 460 |
| 371666 | 92044 | 92057 | CACAAAGGTAATTG | 2-10-2 MOE | 461 |
| 371667 | 92058 | 92071 | ATCATTTCTTCCAG | 2-10-2 MOE | 462 |
| 371668 | 92072 | 92085 | TTATCAATGATGCA | 2-10-2 MOE | 463 |
| 371670 | 92100 | 92113 | GCATGCTGGACAGT | 2-10-2 MOE | 440 |
| 371672 | 92128 | 92141 | TTCCAGCTTGAAGA | 2-10-2 MOE | 435 |
| 371674 | 92147 | 92160 | CCATTACCTTCCAG | 2-10-2 MOE | 466 |
| 371637 | 92983 | 92996 | GCATAAACAGGGTT | 2-10-2 MOE | 467 |
| 371654 | 93928 | 93941 | GAACAAAAATTAAA | 2-10-2 MOE | 427 |
| 371641 | 99772 | 99785 | AGAACTCACATCTG | 2-10-2 MOE | 455 |
| 371679 | 99883 | 99896 | TTTATAAAGTAAAG | 2-10-2 MOE | 429 |
| 371660 | 99933 | 99946 | AAGGATATTTTAAA | 2-10-2 MOE | 425 |
| 371635 | 105004 | 105017 | TATGAAAGGAATGT | 2-10-2 MOE | 472 |
| 371654 | 105028 | 105041 | GAACAAAAATTAAA | 2-10-2 MOE | 427 |
| 371676 | 106482 | 106495 | TTCCTTAAGCTTCC | 2-10-2 MOE | 474 |
| 371650 | 107838 | 107851 | TCTTTTAAAGAAGA | 2-10-2 MOE | 424 |
| 371673 | 110922 | 110935 | ACCTTCCAGGTTCA | 2-10-2 MOE | 422 |
| 371673 | 111580 | 111593 | ACCTTCCAGGTTCA | 2-10-2 MOE | 422 |
| 371634 | 114608 | 114621 | CAGAATATATTTCT | 2-10-2 MOE | 444 |
| 371638 | 115040 | 115053 | ATAGGAAGCATAAA | 2-10-2 MOE | 423 |
| 371660 | 116244 | 116257 | AAGGATATTTTAAA | 2-10-2 MOE | 425 |
| 371663 | 116657 | 116670 | ATAAGAGATTAAAA | 2-10-2 MOE | 450 |
| 371673 | 118068 | 118081 | ACCTTCCAGGTTCA | 2-10-2 MOE | 422 |
| 371666 | 118834 | 118847 | CACAAAGGTAATTG | 2-10-2 MOE | 461 |
| 371660 | 119858 | 119871 | AAGGATATTTTAAA | 2-10-2 MOE | 425 |
| 371660 | 120210 | 120223 | AAGGATATTTTAAA | 2-10-2 MOE | 425 |
| 371662 | 120876 | 120889 | GGGCATTGTTAAAA | 2-10-2 MOE | 452 |
| 371655 | 124004 | 124017 | TACTGTGAGAAATA | 2-10-2 MOE | 433 |
| 371656 | 124170 | 124183 | GAACAGTTAAACAT | 2-10-2 MOE | 485 |
In certain embodiments, the target zone is the nucleotide 88142-88269 of SEQ ID NO:8.In certain embodiments, lack the nucleotide 88142-88269 of antisense compounds targeting SEQ ID NO:8.In some this embodiment, the short antisense compounds of targeted nucleotide 88142-88269 comprises the nucleotide sequence that is selected from SEQ ID NO 413,414,415,416,417 or 418.In some this embodiment, the short antisense compounds of the nucleotide 88142-88269 of targeting SEQ IDNO:8 is selected from Isis NO.371644,371645,371649,371651,371652 or 371653.
In certain embodiments, the target zone is the nucleotide 88142-88169 of SEQ ID NO:8.In certain embodiments, lack the nucleotide 88142-88169 of antisense compounds targeting SEQ ID NO:8.In some this embodiment, the short antisense compounds of targeted nucleotide 88142-88169 comprises the nucleotide sequence that is selected from SEQ ID NO 413 or 414.In some this embodiment, the short antisense compounds of the nucleotide 88142-88169 of targeting SEQ ID NO:8 is selected from Isis NO.371644 or 371645.
In certain embodiments, the target zone is the nucleotide 88242-88269 of SEQ ID NO:8.In certain embodiments, lack the nucleotide 88242-88269 of antisense compounds targeting SEQ ID NO:8.In some this embodiment, the short antisense compounds of targeted nucleotide 88242-88269 comprises the nucleotide sequence that is selected from SEQ ID NO 416,417 or 418.In some this embodiment, the short antisense compounds of the nucleotide 88242-88269 of targeting SEQ ID NO:8 is selected from Isis NO.371651,371652 or 371653.
In certain embodiments, the target zone is the nucleotide 92037-92155 of SEQ ID NO:8.In certain embodiments, lack the nucleotide 92037-92155 of antisense compounds targeting SEQ ID NO:8.In some this embodiment, the short antisense compounds of targeted nucleotide 92037-92155 comprises the nucleotide sequence that is selected from SEQ ID NO 419,420,421 or 422.In some this embodiment, the short antisense compounds of the nucleotide 92037-92155 of targeting SEQ ID NO:8 is selected from Isis NO.371665,371669,371671 or 171673.
In certain embodiments, the target zone is the nucleotide 92114-92155 of SEQ ID NO:8.In certain embodiments, lack the nucleotide 92114-92155 of antisense compounds targeting SEQ ID NO:8.In some this embodiment, the short antisense compounds of targeted nucleotide 92114-92155 comprises the nucleotide sequence that is selected from SEQ ID NO 421 or 422.In some this embodiment, the short antisense compounds of the nucleotide 92114-92155 of targeting SEQ ID NO:8 is selected from Isis NO.371671 or 171673.
In certain embodiments, its length of short antisense compounds of targeting GCCR nucleic acid is 8-16, preferred 9-15, more preferably 9-14, more preferably 10-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting GCCR nucleic acid is 9-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting GCCR nucleic acid is 10-14 nucleotide.In certain embodiments, this short antisense compounds is short antisense oligonucleotide.
In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid is short gapmer.In some this embodiment, comprise at least one high-affinity in the short gapmer of targeting GCCR nucleic acid one or more pterions therein and modify.In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid comprises 1-3 high-affinity modification in each pterion.In some this embodiment, the nucleoside in pterion or nucleotide comprise 2 ' and modify.In some this embodiment, the monomer in pterion is BNA.In some this embodiment, the monomer in pterion is selected from α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA, β-D-methylene oxygen base (4 '-CH2-O-2 ') BNA, ethyleneoxy group (4 '-(CH2)2-O-2 ') BNA, amino oxygen base (4 '-CH2-O-N (R)-2 ') BNA and oxygen base amino (4 '-CH2-N (R)-O-2 ') BNA.In certain embodiments, the monomer in pterion comprises in 2 ' position and is selected from following substituent group: pi-allyl, amino, azido, thio group, O-pi-allyl, O-C1-C10Alkyl ,-OCF3, O-(CH2)2-O-CH3, 2 '-O (CH2)2SCH3, O-(CH2)2-O-N (Rm) (Rn) and O-CH2-C (=O)-N (Rm) (Rn), each R whereinmAnd RnIndependent is H or substituted or unsubstituted C1-C10Alkyl.In certain embodiments, the monomer in pterion is 2 ' MOE nucleotide.
In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid comprises between 5 ' pterion and 3 ' pterion at interval.In certain embodiments, comprise 5,6,7,8,9,10,11,12,13 or 14 monomers at interval.In certain embodiments, Jian Ge monomer is not modified deoxyribonucleotide.In certain embodiments, Jian Ge monomer is not modified ribonucleotide.In certain embodiments, modify (if any) at interval and cause producing such antisense compounds, when in conjunction with its target nucleic acids, this chemical compound can be supported the cutting of RNA enzyme (including but not limited to RNA enzyme H).
In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid has the same Dan Julian key.In some this embodiment, these keys all are that thiophosphate connects key.In certain embodiments, Lian Jian is that di-phosphate ester connects key.In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid has mixed matrix.
In certain embodiments, its length of short antisense compounds of targeting GCCR nucleic acid is 8 monomers.In certain embodiments, its length of short antisense compounds of targeting GCCR nucleic acid is 9 monomers.In certain embodiments, its length of short antisense compounds of targeting GCCR nucleic acid is 10 monomers.In certain embodiments, its length of short antisense compounds of targeting GCCR nucleic acid is 11 monomers.In certain embodiments, its length of short antisense compounds of targeting GCCR nucleic acid is 12 monomers.In certain embodiments, its length of short antisense compounds of targeting GCCR nucleic acid is 13 monomers.In certain embodiments, its length of short antisense compounds of targeting GCCR nucleic acid is 14 monomers.In certain embodiments, its length of short antisense compounds of targeting GCCR nucleic acid is 15 monomers.In certain embodiments, its length of short antisense compounds of targeting GCCR nucleic acid is 16 monomers.In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid comprises 9-15 monomer.In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid comprises 10-15 monomer.In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid comprises 12-14 monomer.In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid comprises 12-14 nucleotide or nucleoside.
In certain embodiments, the invention provides the method for the expression of regulating GCCR.In certain embodiments, this method comprises the short antisense compounds that uses one or more targeting GCCR nucleic acid, and wherein the short antisense compounds of this targeting GCCR nucleic acid is about 8 to about 16, preferably 9-15, more preferably 9-14, more preferably 10-14 monomer (promptly about 8 monomer to about 16 connections).Those of ordinary skills will appreciate that, this comprises the method that the short antisense compounds that uses one or more 8,9,10,11,12,13,14,15 or 16 monomeric targeting GCCR nucleic acid is regulated the expression of GCCR.
In certain embodiments, the method for adjusting GCCR comprises that using length is the short antisense compounds of 8 monomeric targeting GCCR nucleic acid.In certain embodiments, the method for adjusting GCCR comprises that using length is the short antisense compounds of 9 monomeric targeting GCCR nucleic acid.In certain embodiments, the method for adjusting GCCR comprises that using length is the short antisense compounds of 10 monomeric targeting GCCR nucleic acid.In certain embodiments, the method for adjusting GCCR comprises that using length is the short antisense compounds of 11 monomeric targeting GCCR nucleic acid.In certain embodiments, the method for adjusting GCCR comprises the short antisense compounds that uses 12 monomeric targeting GCCR nucleic acid of length.In certain embodiments, the method for adjusting GCCR comprises that using length is the short antisense compounds of 13 monomeric targeting GCCR nucleic acid.In certain embodiments, the method for adjusting GCCR comprises that using length is the short antisense compounds of 14 monomeric targeting GCCR nucleic acid.In certain embodiments, the method for adjusting GCCR comprises that using length is the short antisense compounds of 15 monomeric targeting GCCR nucleic acid.In certain embodiments, the method for adjusting GCCR comprises that using length is the short antisense compounds of 16 monomeric targeting GCCR nucleic acid.
In certain embodiments, the method for the expression of adjusting GCCR comprises that use comprises the short antisense compounds of 9-15 monomeric targeting GCCR nucleic acid.In certain embodiments, the method for the expression of adjusting GCCR comprises that use comprises the short antisense compounds of 10-15 monomeric targeting GCCR nucleic acid.In certain embodiments, the method for the expression of adjusting GCCR comprises that use comprises the short antisense compounds of 12-14 monomeric targeting GCCR nucleic acid.In certain embodiments, the method for the expression of adjusting GCCR comprises the short antisense compounds that uses the targeting GCCR nucleic acid that comprises 12-14 nucleotide or nucleoside.
7. glucagon receptor (GCGR)
Normal keeping of glucemia is the metabolism incident of a careful adjusting.This is responsible for keeping in postabsorptive state (postabsorbative state) 29 amino acid peptides of blood glucose levels glucagon, can increase the release of glucose by activating the lipolysis in liver glycogenolysis, glyconeogenesis, the stimulation fatty tissue and stimulating insulin secretion from liver.In hypertension glucose level process, insulin can reverse the liver glycogenolysis of glucagon mediation and the enhancing of glyconeogenesis.In diabetics, insulin or do not have, or not exclusively effectively.Though treatment of diabetes is concentrating on the increase insulin level traditionally, but the antagonism of glucagon function has been considered to a kind of alternative medicine because glucagon is to bring into play its physiological action by carrying out signal transduction with the nationality glucagon receptor, therefore glucagon receptor has been considered to potential treatment target (the Madsen et al. of diabetes, Curr.Pharm.Des., 1999,5,683-691).
Glucagon receptor belongs to the superfamily of the g protein coupled receptor with seven membrane spaning domains.It still can in conjunction with structurally with the member of the littler subfamily of the homoreceptor of the similar peptide of glucagon.The gene of coding human glucagon receptor was cloned in 1994, to the analysis of genome sequence disclosed a plurality of introns and with 82% homogeneity (Lok et al., Gene, 1994,140, the 203-209. of rat glucagon receptor gene; MacNeil et al., Biochem.Biophys.Res.Commun., 1994,198,328-334).The clone of rat glucagon receptor gene also caused multiple in addition road splice variant report (Maget et al., FEBS Lett., 1994,351,271-275).Human glucagon receptor gene mapping on chromosome 17q25 (Menzel et al., Genomics, 1994,20,327-328).Codon 40 Gly of place cause the affinity of glucagon is reduced by 3 times of (Fujisawa et al. to the missense mutation of Ser in glucagon receptor gene, Diabetologia, 1995,38,983-985), and this sudden change is associated with several morbid states, comprise noninsulindependent diabetes (Fujisawa et al., Diabetologia, 1995,38,983-985), hypertension (Chambers andMorris, Nat.Genet., 1996,12,122) and central obesity (centraladiposity) (Siani et al., Obes.Res., 2001,9,722-726).
Definition
" glucagon receptor " is that its expression is treated by lacking gene outcome or the protein that antisense compounds is regulated.Glucagon receptor is commonly referred to GCGR, but also can be described as GR, GGR, MGC138246, MGC93090.
" GCGR nucleic acid " means the nucleic acid of any coding GCGR.For example, in certain embodiments, GCGR nucleic acid include but not limited to encode GCGR (DNA) sequence of GCGR, the RNA sequence of transcribing from the DNA of coding GCGR and the mRNA sequence of coding GCGR." GCGR mRNA " means the proteic mRNA of coding GCGR.
The treatment indication
Antisense technology is to reduce the effective means that glucagon receptor (GCGR) is expressed, and has been proved to be in multiple therapeutic, diagnosis type and the application of research property to have unique applications.Thus, in certain embodiments, the invention provides targeting coding glucagon receptor nucleic acid, can regulate the short antisense compounds of the expression of glucagon receptor.This paper provides in addition and can suppress the short antisense compounds that GCGR expresses.This paper also provides treatment individual method, and described method comprises and gives the pharmaceutical composition that one or more comprise the short antisense compounds of targeting GCGR nucleic acid.In certain embodiments, because suppressing GCGR, the short antisense compounds of targeting GCGR nucleic acid expresses, this paper provides by giving the pharmaceutical composition that one or more comprise the short antisense compounds of targeting GCGR nucleic acid, treat to suffer from the method with the experimenter of active diseases associated of GCGR or disease.For example, this paper provides treatment to suffer from the experimenter's of high blood-glucose, hyperglycemia, prediabetes, type ii diabetes, metabolic syndrome, obesity and/or insulin resistance method.
This paper also is susceptible to the pharmaceutical composition of short antisense compounds that comprises one or more targeting GCGR and drug acceptable carrier, diluent, reinforcing agent or the excipient of choosing wantonly.Some The compounds of this invention also can be used for preparing in order to treatment and the glucagon effect diseases associated of GCGR mediation and the medicine of disease.
Certain embodiments of the present invention comprise the method for the expression that reduces the GCGR in tissue or the cell, and described method comprises contacts the encode short antisense compounds of nucleic acid of GCGR or the pharmaceutical composition that comprises this short antisense compounds of described cell or tissue and targeting.In some this embodiment, the invention provides the method that reduces blood glucose levels, blood triglyceride level or blood cholesterol levels among the experimenter, described method comprises and gives this experimenter with weak point antisense compounds or pharmaceutical composition.Blood levels can be blood plasma level or serum levels.What also be susceptible to is method, the method that improves the GLP-1 level of improving insulin sensitivity in the animal and the method that suppresses liver glucose output, and these methods comprise and give described animal with antisense oligonucleotide of the present invention or pharmaceutical composition.The improvement of insulin sensitivity can be represented by the reduction of circulation insulin level.
In certain embodiments, the invention provides treatment and suffer from method with the experimenter of the GLA diseases associated of GCGR mediation or disease, described method comprise will treatment or the short antisense compounds or the pharmaceutical composition of prevention effective dose give this experimenter.In certain embodiments, this disease or disease may be metabolic disease or disease.In certain embodiments, this metabolic disease or disease are diabetes, hyperglycemia, hyperlipemia, metabolic syndrome X, obesity, the high glucagonemia of constitutional, insufficient insulin or insulin resistance.In some embodiments, diabetes are type ii diabetes.In some embodiments, obesity is that meals cause.In some embodiments, hyperlipemia raises relevant with the blood lipid level.Lipid comprises cholesterol and triglyceride.In one embodiment, disease is the liver fat degeneration.In some embodiments, steatosis is fat hepatitis or non-alcoholic stellato-hepatitis.
In certain embodiments, the invention provides and use oligomeric compounds described herein, prevent or postpone the method and the method that keeps the β cell function in the animal of the outbreak that blood glucose levels raises in the animal.
The short antisense compounds of some targeting GCGR can be used to regulate the expression of the GCGR among the experimenter's (as animal, including but not limited to the people) who needs.In certain embodiments, this method comprises that the short antisense compounds with the expression that can reduce GCGR RNA of effective dose gives the step of described animal.In certain embodiments, lack level or the function that antisense compounds can reduce GCGRRNA effectively.Because the reduction of GCGR mRNA level also can cause the change of GCGR protein expression product, also can be measured this change that produces.Some can effectively reduce the level of GCGR RNA or protein expression product or the antisense compounds of function, is considered to active antisense compounds.In certain embodiments, short antisense compounds can reduce the expression of GCGR, causes RNA to reduce and reaches at least 10%, at least 20%, at least 25%, at least 30%, at least 40%, at least 50%, at least 60%, at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 98%, at least 99% or 100%.
The method of regulator of screening glucagon receptor and the method for regulating the expression of glucagon receptor in cell, tissue or animal are provided in addition, described method comprise the short antisense compounds that makes described cell, tissue or animal and one or multiple targeting GCGR or with comprise this compound compositions and contact.This paper gives treatment and suspects to suffer from or easily suffer from method with the animal (particularly people) of the expression diseases associated or the disease of glucagon receptor.Some this method comprises treatment or prevents one or more The compounds of this invention of effective dose or the people that compositions needs treatment.
The reduction of the expression of glucagon receptor can for example be measured in blood, blood plasma, serum, fatty tissue, liver or any other body fluid, tissue or the organ of this animal.Preferably, contained cell contains coding proteic nucleic acid of glucagon receptor and/or glucagon receptor albumen itself in the middle of this analyzed fluid, tissue or the organ.
Medicine and other compositionss of comprising short antisense compounds also are provided.In certain embodiments, the short antisense compounds of nucleic acid of targeting coding GCGR is to be added to suitable medicine by certain chemical compound with effective dose can accept diluent or carrier, uses in pharmaceutical composition.
The short antisense compounds of targeting GCGR nucleic acid has short antisense compounds characteristic or feature any or that multiple this paper summarized.In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid has and is selected from following die body (pterion-deoxidation interval-pterion): 1-12-1,1-1-10-2,2-10-1-1,3-10-3,2-10-3,2-10-2,1-10-1,1-10-2,3-8-3,2-8-2,1-8-1,3-6-3 or 1-6-1.In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid has and is selected from following die body (pterion-deoxidation interval-pterion): 1-12-1,2-10-2,3-10-3,3-8-3,1-1-10-2.
The short antisense compounds of some targeting GCGR nucleic acid
In certain embodiments, lack the antisense compounds targeting and have sequence
The GCGR nucleic acid of searching number NM_000160.1 (being incorporated herein) with SEQ ID NO:9.In some this embodiment, short antisense compounds and the SEQ IDNO:9 of targeting SEQ ID NO:9 have at least 90% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:9 of targeting SEQ ID NO:9 have at least 95% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:9 of targeting SEQ ID NO:9 have 100% complementarity.In certain embodiments, the short antisense compounds of targeting SEQ ID NO:9 comprises the nucleotide sequence that is selected from the nucleotide sequence that provides in table 12 and 13.
The nucleotide sequence that each SEQ ID NO provides in the table 12 and 13 is independent of any to connecting the modification of key or nuclear base between sugar moieties, nucleoside.Thus, the defined short antisense compounds of certain SEQ ID NO can comprise one or more to connecting the modification of key or nuclear base between sugar moieties, nucleoside independently.Isis number (Isis NO.) described antisense compounds represented the nuclear base sequence with one or more to connecting key between sugar moieties, nucleoside or examining the combination of the modification of base.
In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid comprises the gapmer die body.In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid comprises 3-10-3 gapmer die body.In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid comprises the gapmer die body.In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid comprises 3-8-3 gapmer die body.In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid comprises the gapmer die body.In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid comprises 2-10-2 gapmer die body.
Table 12 and 13 has been enumerated the example of the short antisense compounds of targeting SEQ ID NO:9.Table 12 has been enumerated the short antisense compounds that 100% complementarity is arranged with SEQ ID NO:9.Table 13 has been enumerated the short antisense compounds that has one or two mispairing with respect to SEQ ID NO:9.The file that is marked with " gapmer die body " is represented the pterion of each short antisense compounds-at interval-pterion die body.Spacer segment comprises 2 '-deoxyribonucleotide, and each nucleotide of each pterion section comprises the sugar through 2 '-modification.The concrete sugar through 2 '-modification is also represented in " gapmer die body " file.For example, " 2-10-2 MOE " means 2-10-2 gapmer die body, and wherein the spacer segment both sides of 10 2 '-deoxyribonucleotides are connected to the pterion section of 2 nucleotide, and wherein the nucleotide of pterion section is 2 '-MOE nucleotide.Connecting key between nucleoside is thiophosphate.Short antisense compounds comprises the 5-methylcytidine that substitutes not modified cytosine, unless show " not modified cytosine " in the gapmer die body file, represented in this case cytosine is not modified cytosine.For example, " 5-mC is only in the interval " expression spacer segment has the 5-methylcytidine, and the pterion section has not modified cytosine.
Table 12: the short antisense compounds of targeting SEQ ID NO:9
| ISIS NO. | 5 ' target site | 3 ' target site | Sequence (5 '-3 ') | The Gapmer die body | SEQ ID NO |
| 338463 | 378 | 393 | TAGAGCTTCCACTTCT | 3-10-3 MOE | 486 |
| 338534 | 378 | 391 | GAGCTTCCACTTCT | 3-8-3 MOE | 487 |
| 327130 | 499 | 512 | TGTTGGCCGTGGTA | 3-8-3 MOE | 488 |
| 327131 | 500 | 513 | ATGTTGGCCGTGGT | 3-8-3 MOE | 489 |
| 327132 | 501 | 514 | GATGTTGGCCGTGG | 3-8-3 MOE | 490 |
| 327133 | 502 | 515 | AGATGTTGGCCGTG | 3-8-3 MOE | 491 |
| 327134 | 503 | 516 | GAGATGTTGGCCGT | 3-8-3 MOE | 492 |
| 327135 | 504 | 517 | GGAGATGTTGGCCG | 3-8-3 MOE | 493 |
| 327136 | 505 | 518 | AGGAGATGTTGGCC | 3-8-3 MOE | 494 |
| 327137 | 506 | 519 | CAGGAGATGTTGGC | 3-8-3 MOE | 495 |
| 327138 | 507 | 520 | GCAGGAGATGTTGG | 3-8-3 MOE | 496 |
| 327139 | 508 | 521 | GGCAGGAGATGTTG | 3-8-3 MOE | 497 |
| 327140 | 531 | 544 | GTGGTGCCAAGGCA | 3-8-3 MOE | 498 |
| 327141 | 532 | 545 | TGTGGTGCCAAGGC | 3-8-3 MOE | 499 |
| 327142 | 533 | 546 | TTGTGGTGCCAAGG | 3-8-3 MOE | 500 |
| 327143 | 534 | 547 | TTTGTGGTGCCAAG | 3-8-3 MOE | 501 |
| 327144 | 535 | 548 | CTTTGTGGTGCCAA | 3-8-3 MOE | 502 |
| 327145 | 536 | 549 | ACTTTGTGGTGCCA | 3-8-3 MOE | 503 |
| 327146 | 537 | 550 | CACTTTGTGGTGCC | 3-8-3 MOE | 504 |
| 327147 | 538 | 551 | GCACTTTGTGGTGC | 3-8-3 MOE | 505 |
| 327148 | 539 | 552 | TGCACTTTGTGGTG | 3-8-3 MOE | 506 |
| 327149 | 540 | 553 | TTGCACTTTGTGGT | 3-8-3 MOE | 507 |
| 327150 | 545 | 558 | CGGTGTTGCACTTT | 3-8-3 MOE | 508 |
| 327151 | 546 | 559 | GCGGTGTTGCACTT | 3-8-3 MOE | 509 |
| 327152 | 547 | 560 | AGCGGTGTTGCACT | 3-8-3 MOE | 510 |
| 327153 | 548 | 561 | AAGCGGTGTTGCAC | 3-8-3 MOE | 511 |
| 327154 | 549 | 562 | GAAGCGGTGTTGCA | 3-8-3 MOE | 512 |
| 327155 | 550 | 563 | CGAAGCGGTGTTGC | 3-8-3 MOE | 513 |
| 327156 | 551 | 564 | ACGAAGCGGTGTTG | 3-8-3 MOE | 514 |
| 327157 | 552 | 565 | CACGAAGCGGTGTT | 3-8-3 MOE | 515 |
| 327158 | 553 | 566 | ACACGAAGCGGTGT | 3-8-3 MOE | 516 |
| 327159 | 554 | 567 | AACACGAAGCGGTG | 3-8-3 MOE | 517 |
| 345897 | 684 | 697 | GCTGCTGTACATCT | 2-10-2 MOE | 518 |
| 327160 | 684 | 697 | GCTGCTGTACATCT | 3-8-3 MOE | 518 |
| 327161 | 685 | 698 | AGCTGCTGTACATC | 3-8-3 MOE | 520 |
| 327162 | 686 | 699 | AAGCTGCTGTACAT | 3-8-3 MOE | 521 |
| 327163 | 687 | 700 | GAAGCTGCTGTACA | 3-8-3 MOE | 522 |
| 327164 | 688 | 701 | GGAAGCTGCTGTAC | 3-8-3 MOE | 523 |
| 327165 | 689 | 702 | TGGAAGCTGCTGTA | 3-8-3 MOE | 524 |
| 327166 | 690 | 703 | CTGGAAGCTGCTGT | 3-8-3 MOE | 525 |
| 327167 | 691 | 704 | CCTGGAAGCTGCTG | 3-8-3 MOE | 526 |
| 327168 | 692 | 705 | ACCTGGAAGCTGCT | 3-8-3 MOE | 527 |
| 327169 | 693 | 706 | CACCTGGAAGCTGC | 3-8-3 MOE | 528 |
| 327170 | 694 | 707 | TCACCTGGAAGCTG | 3-8-3 MOE | 529 |
| 327171 | 695 | 708 | ATCACCTGGAAGCT | 3-8-3 MOE | 530 |
| 327172 | 696 | 709 | CATCACCTGGAAGC | 3-8-3 MOE | 531 |
| 327173 | 697 | 710 | ACATCACCTGGAAG | 3-8-3 MOE | 532 |
| 327174 | 698 | 711 | TACATCACCTGGAA | 3-8-3 MOE | 533 |
| 327175 | 699 | 712 | GTACATCACCTGGA | 3-8-3 MOE | 534 |
| 327176 | 700 | 713 | TGTACATCACCTGG | 3-8-3 MOE | 535 |
| 327177 | 701 | 714 | GTGTACATCACCTG | 3-8-3 MOE | 536 |
| 327178 | 869 | 882 | TAGCGGGTCCTGAG | 3-8-3 MOE | 537 |
| 327179 | 870 | 883 | GTAGCGGGTCCTGA | 3-8-3 MOE | 538 |
| 327180 | 871 | 884 | TGTAGCGGGTCCTG | 3-8-3 MOE | 539 |
| 327181 | 872 | 885 | CTGTAGCGGGTCCT | 3-8-3 MOE | 540 |
| 327182 | 873 | 886 | GCTGTAGCGGGTCC | 3-8-3 MOE | 541 |
| 327183 | 874 | 887 | GGCTGTAGCGGGTC | 3-8-3 MOE | 542 |
| 327184 | 875 | 888 | TGGCTGTAGCGGGT | 3-8-3 MOE | 543 |
| 327185 | 876 | 889 | CTGGCTGTAGCGGG | 3-8-3 MOE | 544 |
| 327186 | 877 | 890 | TCTGGCTGTAGCGG | 3-8-3 MOE | 545 |
| 327187 | 878 | 891 | TTCTGGCTGTAGCG | 3-8-3 MOE | 546 |
| 327188 | 955 | 968 | TGAACACCGCGGCC | 3-8-3 MOE | 547 |
| 327189 | 956 | 969 | ATGAACACCGCGGC | 3-8-3 MOE | 548 |
| 327190 | 957 | 970 | CATGAACACCGCGG | 3-8-3 MOE | 549 |
| 327191 | 958 | 971 | GCATGAACACCGCG | 3-8-3 MOE | 550 |
| 327192 | 959 | 972 | TGCATGAACACCGC | 3-8-3 MOE | 551 |
| 327193 | 960 | 973 | TTGCATGAACACCG | 3-8-3 MOE | 552 |
| 327194 | 961 | 974 | ATTGCATGAACACC | 3-8-3 MOE | 553 |
| 327195 | 962 | 975 | TATTGCATGAACAC | 3-8-3 MOE | 554 |
| 327196 | 963 | 976 | ATATTGCATGAACA | 3-8-3 MOE | 555 |
| 327197 | 964 | 977 | CATATTGCATGAAC | 3-8-3 MOE | 556 |
| 327198 | 1019 | 1032 | AGGTTGTGCAGGTA | 3-8-3 MOE | 557 |
| 327199 | 1020 | 1033 | CAGGTTGTGCAGGT | 3-8-3 MOE | 558 |
| 327200 | 1021 | 1034 | GCAGGTTGTGCAGG | 3-8-3 MOE | 559 |
| 327201 | 1022 | 1035 | AGCAGGTTGTGCAG | 3-8-3 MOE | 560 |
| 327202 | 1023 | 1036 | CAGCAGGTTGTGCA | 3-8-3 MOE | 561 |
| 327203 | 1024 | 1037 | CCAGCAGGTTGTGC | 3-8-3 MOE | 562 |
| 327204 | 1025 | 1038 | CCCAGCAGGTTGTG | 3-8-3 MOE | 563 |
| 327205 | 1026 | 1039 | GCCCAGCAGGTTGT | 3-8-3 MOE | 564 |
| 327206 | 1027 | 1040 | GGCCCAGCAGGTTG | 3-8-3 MOE | 565 |
| 327207 | 1028 | 1041 | AGGCCCAGCAGGTT | 3-8-3 MOE | 566 |
| 338491 | 1160 | 1175 | TGTCATTGCTGGTCCA | 3-10-3 MOE | 567 |
| 338562 | 1160 | 1173 | TCATTGCTGGTCCA | 3-8-3 MOE | 568 |
| 338498 | 1307 | 1322 | TGGCCAGCCGGAACTT | 3-10-3 MOE | 569 |
| 338569 | 1307 | 1320 | GCCAGCCGGAACTT | 3-8-3 MOE | 570 |
| 338499 | 1329 | 1344 | GGGATGAGGGTCAGCG | 3-10-3 MOE | 571 |
| 338570 | 1329 | 1342 | GATGAGGGTCAGCG | 3-8-3 MOE | 572 |
| 385067 | 1364 | 1377 | AAGGCAAAGACCAC | 3-8-3 MOE | 573 |
| 338573 | 1401 | 1414 | GGAGCGCAGGGTGC | 3-8-3 MOE | 574 |
| 338580 | 1487 | 1500 | TGCACCTCCTTGTT | 3-8-3 MOE | 575 |
Table 13: targeting SEQ ID NO:9 and have the short antisense compounds of 1 or 2 mispairing
| ISIS NO. | 5 ' target site | 3 ' target site | Sequence (5 '-3 ') | The Gapmer die body | SEQ ID NO |
| 338577 | 158 | 171 | CAGCAGACCCTGGA | 3-8-3 MOE | 576 |
| 338458 | 237 | 252 | ACATCTGGCAGAGGTT | 3-10-3 MOE | 577 |
| 338529 | 237 | 250 | ATCTGGCAGAGGTT | 3-8-3 MOE | 578 |
| 338466 | 318 | 333 | CAGGCCAGCAGGAGTA | 3-10-3 MOE | 579 |
| 338537 | 318 | 331 | GGCCAGCAGGAGTA | 3-8-3 MOE | 580 |
| 338533 | 364 | 377 | CAAACAAAAAGTCC | 3-8-3 MOE | 582 |
| 338462 | 364 | 379 | CTCAAACAAAAAGTCC | 3-10-3 MOE | 581 |
| 338535 | 397 | 410 | GGTGACATTGGTCA | 3-8-3 MOE | 584 |
| 338464 | 397 | 412 | GTGGTGACATTGGTCA | 3-10-3 MOE | 583 |
| 338466 | 470 | 485 | CAGGCCAGCAGGAGTA | 3-10-3 MOE | 579 |
| 338537 | 470 | 483 | GGCCAGCAGGAGTA | 3-8-3 MOE | 580 |
| 385048 | 497 | 510 | TTGGCAGTGGTGTT | 3-8-3 MOE | 587 |
| 385049 | 500 | 513 | ATGTTGGCAGTGGT | 3-8-3 MOE | 588 |
| 338467 | 503 | 518 | AGGAAATGTTGGCAGT | 3-10-3 MOE | 589 |
| 338538 | 503 | 516 | GAAATGTTGGCAGT | 3-8-3 MOE | 590 |
| 385050 | 506 | 519 | CAGGAAATGTTGGC | 3-8-3 MOE | 591 |
| 385051 | 509 | 522 | GGGCAGGAAATGTT | 3-8-3 MOE | 592 |
| 385052 | 523 | 536 | AAGGTAGGTACCAG | 3-8-3 MOE | 593 |
| 385053 | 526 | 539 | ACCAAGGTAGGTAC | 3-8-3 MOE | 594 |
| 385056 | 535 | 548 | CTTTGTGGCACCAA | 3-8-3 MOE | 595 |
| 385057 | 538 | 551 | GCACTTTGTGGCAC | 3-8-3 MOE | 596 |
| 338539 | 539 | 552 | TGCACTTTGTGGCA | 3-8-3 MOE | 597 |
| 385058 | 541 | 554 | GCTGCACTTTGTGG | 3-8-3 MOE | 598 |
| 385059 | 544 | 557 | GGTGCTGCACTTTG | 3-8-3 MOE | 599 |
| 385060 | 547 | 560 | GGCGGTGCTGCACT | 3-8-3 MOE | 600 |
| 385063 | 556 | 569 | TGAACACTAGGCGG | 3-8-3 MOE | 601 |
| 385064 | 559 | 572 | TCTTGAACACTAGG | 3-8-3 MOE | 602 |
| 338469 | 561 | 576 | CACCTCTTGAACACTA | 3-10-3 MOE | 603 |
| 338540 | 561 | 574 | CCTCTTGAACACTA | 3-8-3 MOE | 604 |
| 385065 | 562 | 575 | ACCTCTTGAACACT | 3-8-3 MOE | 605 |
| 385066 | 565 | 578 | CACACCTCTTGAAC | 3-8-3 MOE | 606 |
| 338541 | 590 | 603 | CCTCGAACCCACTG | 3-8-3 MOE | 607 |
| 338473 | 658 | 673 | CTTCTGGACCTCGATC | 3-10-3 MOE | 608 |
| 338544 | 658 | 671 | TCTGGACCTCGATC | 3-8-3 MOE | 609 |
| 338474 | 681 | 696 | CTGCTATACATCTTGG | 3-10-3 MOE | 610 |
| 338545 | 681 | 694 | GCTATACATCTTGG | 3-8-3 MOE | 611 |
| 338475 | 703 | 718 | CACGGTGTACATCACC | 3-10-3 MOE | 612 |
| 338546 | 703 | 716 | CGGTGTACATCACC | 3-8-3 MOE | 613 |
| 338547 | 718 | 731 | ACAGACTGTAGCCC | 3-8-3 MOE | 615 |
| 338476 | 718 | 733 | GGACAGACTGTAGCCC | 3-10-3 MOE | 614 |
| 338550 | 889 | 902 | CATCGCCAATCTTC | 3-8-3 MOE | 617 |
| 338479 | 889 | 904 | GTCATCGCCAATCTTC | 3-10-3 MOE | 616 |
| 338551 | 899 | 912 | ACACTGAGGTCATC | 3-8-3 MOE | 619 |
| 338480 | 899 | 914 | TCACACTGAGGTCATC | 3-10-3 MOE | 618 |
| 338552 | 924 | 937 | CGCCCCGTCACTGA | 3-8-3 MOE | 620 |
| 338555 | 992 | 1005 | AGCAACCAGCAATA | 3-8-3 MOE | 622 |
| 338484 | 992 | 1007 | CCAGCAACCAGCAATA | 3-10-3 MOE | 621 |
| 338485 | 1018 | 1033 | CAGGCTGTACAGGTAC | 3-10-3 MOE | 623 |
| 338556 | 1018 | 1031 | GGCTGTACAGGTAC | 3-8-3 MOE | 624 |
| 338558 | 1051 | 1064 | AGCTCCTCTCAGAG | 3-8-3 MOE | 626 |
| 338487 | 1051 | 1066 | GAAGCTCCTCTCAGAG | 3-10-3 MOE | 625 |
| 338559 | 1079 | 1092 | CAGCCAATGCCCAG | 3-8-3 MOE | 628 |
| 338488 | 1079 | 1094 | CCCAGCCAATGCCCAG | 3-10-3 MOE | 627 |
| 338560 | 1131 | 1144 | AAACAGACACTTGA | 3-8-3 MOE | 630 |
| 338489 | 1131 | 1146 | TCAAACAGACACTTGA | 3-10-3 MOE | 629 |
| 338490 | 1145 | 1160 | AGCACTGAACATTCTC | 3-10-3 MOE | 631 |
| 338561 | 1145 | 1158 | CACTGAACATTCTC | 3-8-3 MOE | 632 |
| 338563 | 1181 | 1194 | ATCCACCAGAATCC | 3-8-3 MOE | 634 |
| 338492 | 1181 | 1196 | GGATCCACCAGAATCC | 3-10-3 MOE | 633 |
| 338564 | 1216 | 1229 | TGATCAGTAAGGCC | 3-8-3 MOE | 635 |
| 338565 | 1232 | 1245 | ACAAAGATGAAAAA | 3-8-3 MOE | 637 |
| 338494 | 1232 | 1247 | GGACAAAGATGAAAAA | 3-10-3 MOE | 636 |
| 338566 | 1267 | 1280 | CACGCAGCTTGGCC | 3-8-3 MOE | 639 |
| 338495 | 1267 | 1282 | GGCACGCAGCTTGGCC | 3-10-3 MOE | 638 |
| 338571 | 1344 | 1357 | GACCCCCAGCAGAG | 3-8-3 MOE | 641 |
| 338500 | 1344 | 1359 | TGGACCCCCAGCAGAG | 3-10-3 MOE | 640 |
| 385068 | 1366 | 1379 | CAAAGGCAAAGACC | 3-8-3 MOE | 642 |
| 385069 | 1369 | 1382 | TCACAAAGGCAAAG | 3-8-3 MOE | 643 |
| 385070 | 1372 | 1385 | CAGTCACAAAGGCA | 3-8-3 MOE | 644 |
| 385071 | 1375 | 1388 | CGTCAGTCACAAAG | 3-8-3 MOE | 645 |
| 385072 | 1378 | 1391 | GCTCGTCAGTCACA | 3-8-3 MOE | 646 |
| 385073 | 1381 | 1394 | CATGCTCGTCAGTC | 3-8-3 MOE | 647 |
| 386608 | 1384 | 1397 | GGGCATGCTCGTCA | 1-12-1 MOE | 648 |
| 386593 | 1384 | 1397 | GGGCATGCTCGTCA | 2-10-2 MOE | 648 |
| 396146 | 1384 | 1397 | GGGCATGCTCGTCA | 2-10-2 MOE | 648 |
| 338572 | 1384 | 1397 | GGGCATGCTCGTCA | 3-8-3 MOE | 648 |
| 396149 | 1384 | 1397 | GGGCATGCTCGTCA | 1-1-10-2 2 '-(butyl acetamido)-palmitamide/OMe/OMe | 648 |
| 386627 | 1384 | 1397 | GGGCATGCTCGTCA | 2-10-2 methylene oxygen base BNA | 648 |
| 386610 | 1387 | 1400 | CTTGGGCATGCTCG | 1-12-1 MOE | 654 |
| 386595 | 1387 | 1400 | CTTGGGCATGCTCG | 2-10-2 MOE | 654 |
| 385074 | 1387 | 1400 | CTTGGGCATGCTCG | 3-8-3 MOE | 654 |
| 385075 | 1390 | 1403 | TGCCTTGGGCATGC | 3-8-3 MOE | 657 |
| 385076 | 1393 | 1406 | GGGTGCCTTGGGCA | 3-8-3 MOE | 648 |
| 385077 | 1396 | 1409 | GCAGGGTGCCTTGG | 3-8-3 MOE | 659 |
| 385078 | 1399 | 1412 | AGCGCAGGGTGCCT | 3-8-3 MOE | 660 |
| 338502 | 1401 | 1416 | GTGGAGCGCAGGGTGC | 3-10-3 MOE | 661 |
| 385079 | 1402 | 1415 | TGGAGCGCAGGGTG | 3-8-3 MOE | 662 |
| 385080 | 1405 | 1418 | TGGTGGAGCGCAGG | 3-8-3 MOE | 663 |
| 385081 | 1408 | 1421 | GCTTGGTGGAGCGC | 3-8-3 MOE | 664 |
| 385082 | 1411 | 1424 | AGAGCTTGGTGGAG | 3-8-3 MOE | 665 |
| 338503 | 1412 | 1427 | AAAAGAGCTTGGTGGA | 3-10-3 MOE | 666 |
| 338574 | 1412 | 1425 | AAGAGCTTGGTGGA | 3-8-3 MOE | 667 |
| 385083 | 1414 | 1427 | AAAAGAGCTTGGTG | 3-8-3 MOE | 668 |
| 385084 | 1417 | 1430 | CAAAAAAGAGCTTG | 3-8-3 MOE | 669 |
| 338504 | 1434 | 1449 | AAGGAGCTGAGGAACA | 3-10-3 MOE | 670 |
| 338575 | 1434 | 1447 | GGAGCTGAGGAACA | 3-8-3 MOE | 671 |
| 327167 | 1441 | 1454 | CCTGGAAGCTGCTG | 3-8-3 MOE | 526 |
| 338576 | 1445 | 1458 | AGACCCTGGAAGGA | 3-8-3 MOE | 673 |
| 338505 | 1445 | 1460 | GCAGACCCTGGAAGGA | 3-10-3 MOE | 672 |
| 338506 | 1449 | 1464 | ACCAGCAGACCCTGGA | 3-10-3 MOE | 674 |
| 338577 | 1449 | 1462 | CAGCAGACCCTGGA | 3-8-3 MOE | 576 |
| 338507 | 1464 | 1479 | CAGTAGAGAACAGCCA | 3-10-3 MOE | 676 |
| 338578 | 1464 | 1477 | GTAGAGAACAGCCA | 3-8-3 MOE | 677 |
| 338508 | 1475 | 1490 | TGTTGAGGAAACAGTA | 3-10-3 MOE | 678 |
| 338579 | 1475 | 1488 | TTGAGGAAACAGTA | 3-8-3 MOE | 679 |
| 338509 | 1487 | 1502 | CCTGCACCTCCTTGTT | 3-10-3 MOE | 680 |
| 338580 | 1610 | 1623 | TGCACCTCCTTGTT | 3-8-3 MOE | 575 |
In certain embodiments, the target zone is the nucleotide 378-391 of SEQ ID NO:9.In certain embodiments, lack the nucleotide 378-391 of antisense compounds targeting SEQ ID NO:9.In some this embodiment, the short antisense compounds of targeted nucleotide 378-391 comprises the nucleotide sequence that is selected from SEQ ID NO 486 or 487.In some this embodiment, the short antisense compounds of the nucleotide 378-391 of targeting SEQ ID NO:9 is selected from IsisNo 338463 or 338534.
In certain embodiments, the target zone is the nucleotide 499-521 of SEQ ID NO:9.In certain embodiments, lack the nucleotide 499-521 of antisense compounds targeting SEQ ID NO:9.In some this embodiment, the short antisense compounds of targeted nucleotide 499-521 comprises the nucleotide sequence that is selected from SEQ ID NO 488,489,490,491,492,493,494,495,496 or 497.In some this embodiment, the short antisense compounds of the nucleotide 499-521 of targeting SEQ ID NO:9 is selected from Isis No 327130,327131,327132,327133,327134,327135,327136,327137,327138 or 327139.
In certain embodiments, the target zone is the nucleotide 531-553 of SEQ ID NO:9.In certain embodiments, lack the nucleotide 531-553 of antisense compounds targeting SEQ ID NO:9.In some this embodiment, the short antisense compounds of targeted nucleotide 531-553 comprises the nucleotide sequence that is selected from SEQ ID NO 498,499,500,501,502,503,504,505,506 or 507.In some this embodiment, the short antisense compounds of the nucleotide 531-553 of targeting SEQ ID NO:9 is selected from Isis No 327140,327141,327142,327143,327144,327145,327146,327147,327148 or 327149.
In certain embodiments, the target zone is the nucleotide 545-567 of SEQ ID NO:9.In certain embodiments, lack the nucleotide 545-567 of antisense compounds targeting SEQ ID NO:9.In some this embodiment, the short antisense compounds of targeted nucleotide 545-567 comprises the nucleotide sequence that is selected from SEQ ID NO 508,509,510,511,512,513,514,515,516 or 517.In some this embodiment, the short antisense compounds of the nucleotide 545-567 of targeting SEQ ID NO:9 is selected from Isis No 327150,327151,327152,327153,327154,327155,327156,327157,327158 or 327159.
In certain embodiments, the target zone is the nucleotide 531-567 of SEQ ID NO:9.In certain embodiments, lack the nucleotide 531-567 of antisense compounds targeting SEQ ID NO:9.In some this embodiment, the short antisense compounds of targeted nucleotide 531-567 comprises the nucleotide sequence that is selected from SEQ ID NO 498,499,500,501,502,503,504,505,506,507,508,509,510,511,512,513,514,515,516 or 517.In some this embodiment, the short antisense compounds of the nucleotide 531-567 of targeting SEQ ID NO:9 is selected from Isis No 327140,327141,327142,327143,327144,327145,327146,327147,327148,327149,327150,327151,327152,327153,327154,327155,327156,327157,327158 or 327159.
In certain embodiments, the target zone is the nucleotide 684-714 of SEQ ID NO:9.In certain embodiments, lack the nucleotide 684-714 of antisense compounds targeting SEQ ID NO:9.In some this embodiment, the short antisense compounds of targeted nucleotide 684-714 comprises the nucleotide sequence that is selected from SEQ ID NO 518,520,521,522,523,524,525,526,527,528,529,530,531,532,533,534,535 or 536.In some this embodiment, the short antisense compounds of the nucleotide 684-714 of targeting SEQ ID NO:9 is selected from Isis No 345897,327160,327161,327162,327163,327164,327165,327166,327167,327168,327169,327170,327171,327172,327173,327174,327175,327176 or 327177.
In certain embodiments, the target zone is the nucleotide 869-891 of SEQ ID NO:9.In certain embodiments, lack the nucleotide 869-891 of antisense compounds targeting SEQ ID NO:9.In some this embodiment, the short antisense compounds of targeted nucleotide 869-891 comprises the nucleotide sequence that is selected from SEQ ID NO 537,538,539,540,541,542,543,544,545 or 546.In some this embodiment, the short antisense compounds of the nucleotide 869-891 of targeting SEQ ID NO:9 is selected from Isis No 327178,327179,327180,327181,327182,327183,327184,327185,327186 or 327187.
In certain embodiments, the target zone is the nucleotide 955-977 of SEQ ID NO:9.In certain embodiments, lack the nucleotide 955-977 of antisense compounds targeting SEQ ID NO:9.9. in some this embodiment, the short antisense compounds of targeted nucleotide 955-977 comprises the nucleotide sequence that is selected from SEQ ID NO 547,548,549,550,551,552,553,554,555 or 556.In some this embodiment, the short antisense compounds of the nucleotide 955-977 of targeting SEQ IDNO:9 is selected from Isis No 327188,327189,327190,327191,327192,327193,327194,327195,327196 or 327197.
In certain embodiments, the target zone is the nucleotide 1019-1041 of SEQ ID NO:9.In certain embodiments, lack the nucleotide 1019-1041 of antisense compounds targeting SEQ ID NO:9.In some this embodiment, the short antisense compounds of targeted nucleotide 1019-1041 comprises the nucleotide sequence that is selected from SEQ ID NO 557,558,559,560,561,562,563,564,565 or 566.In some this embodiment, the short antisense compounds of the nucleotide 1019-1041 of targeting SEQ ID NO:9 is selected from Isis No327198,327199,327200,327201,327202,327203,327204,327205,327206 or 327207.
In certain embodiments, the target zone is the nucleotide 1160-1175 of SEQ ID NO:9.In certain embodiments, lack the nucleotide 1160-1175 of antisense compounds targeting SEQ ID NO:9.In some this embodiment, the short antisense compounds of targeted nucleotide 1160-1175 comprises the nucleotide sequence that is selected from SEQ ID NO 567 or 568.In some this embodiment, the short antisense compounds of the nucleotide 1160-1175 of targeting SEQ ID NO:9 is selected from Isis No 338491 or 338562.
In certain embodiments, the target zone is the nucleotide 1307-1377 of SEQ ID NO:9.In certain embodiments, lack the nucleotide 1307-1377 of antisense compounds targeting SEQ ID NO:9.In some this embodiment, the short antisense compounds of targeted nucleotide 1307-1377 comprises the nucleotide sequence that is selected from SEQ ID NO 569,570,571,572 or 573.In some this embodiment, the short antisense compounds of the nucleotide 1307-1377 of targeting SEQ ID NO:9 is selected from Isis No 338498,338569,338499,338570 or 385067.
In certain embodiments, the target zone is the nucleotide 1307-1414 of SEQ ID NO:9.In certain embodiments, lack the nucleotide 1307-1414 of antisense compounds targeting SEQ ID NO:9.In some this embodiment, the short antisense compounds of targeted nucleotide 1307-1414 comprises the nucleotide sequence that is selected from SEQ ID NO 569,570,571,572,573 or 574.In some this embodiment, the short antisense compounds of the nucleotide 1307-1414 of targeting SEQ ID NO:9 is selected from Isis No 338498,338569,338499,338570,385067 or 338573.
In certain embodiments, its length of short antisense compounds of targeting GCGR nucleic acid is 8-16, preferred 9-15, more preferably 9-14, more preferably 10-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting GCGR nucleic acid is 9-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting GCGR nucleic acid is 10-14 nucleotide.In certain embodiments, this short antisense compounds is short antisense oligonucleotide.
In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid is short gapmer.In some this embodiment, comprise at least one high-affinity in the short gapmer of targeting GCGR nucleic acid one or more pterions therein and modify.In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid comprises 1-3 high-affinity modification in each pterion.In some this embodiment, the nucleoside in pterion or nucleotide comprise 2 ' and modify.In some this embodiment, the monomer in pterion is BNA.In some this embodiment, the monomer in pterion is selected from α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA, β-D-methylene oxygen base (4 '-CH2-O-2 ') BNA, ethyleneoxy group (4 '-(CH2)2-O-2 ') BNA, amino oxygen base (4 '-CH2-O-N (R)-2 ') BNA and oxygen base amino (4 '-CH2-N (R)-O-2 ') BNA.In certain embodiments, the monomer in pterion comprises in 2 ' position and is selected from following substituent group: pi-allyl, amino, azido, thio group, O-pi-allyl, O-C1-C10Alkyl ,-OCF3, O-(CH2)2-O-CH3, 2 '-O (CH2)2SCH3, O-(CH2)2-O-N (Rm) (Rn) and O-CH2-C (=O)-N (Rm) (Rn), each R whereinmAnd RnIndependent is H or substituted or unsubstituted C1-C10Alkyl.In certain embodiments, the monomer in pterion is 2 ' MOE nucleotide.
In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid comprises between 5 ' pterion and 3 ' pterion at interval.In certain embodiments, comprise 5,6,7,8,9,10,11,12,13 or 14 monomers at interval.In certain embodiments, Jian Ge monomer is not modified deoxyribonucleotide.In certain embodiments, Jian Ge monomer is not modified ribonucleotide.In certain embodiments, modify (if any) at interval and cause producing such antisense compounds, when in conjunction with its target nucleic acids, this chemical compound can be supported the cutting of RNA enzyme (including but not limited to RNA enzyme H).
In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid has the same Dan Julian key.In some this embodiment, these keys all are that thiophosphate connects key.In certain embodiments, Lian Jian is that di-phosphate ester connects key.In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid has mixed matrix.
In certain embodiments, its length of short antisense compounds of targeting GCGR nucleic acid is 8 monomers.In certain embodiments, its length of short antisense compounds of targeting GCGR nucleic acid is 9 monomers.In certain embodiments, its length of short antisense compounds of targeting GCGR nucleic acid is 10 monomers.In certain embodiments, its length of short antisense compounds of targeting GCGR nucleic acid is 11 monomers.In certain embodiments, its length of short antisense compounds of targeting GCGR nucleic acid is 12 monomers.In certain embodiments, its length of short antisense compounds of targeting GCGR nucleic acid is 13 monomers.In certain embodiments, its length of short antisense compounds of targeting GCGR nucleic acid is 14 monomers.In certain embodiments, its length of short antisense compounds of targeting GCGR nucleic acid is 15 monomers.In certain embodiments, its length of short antisense compounds of targeting GCGR nucleic acid is 16 monomers.In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid comprises 9-15 monomer.In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid comprises 10-15 monomer.In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid comprises 12-14 monomer.In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid comprises 12-14 nucleotide or nucleoside.
In certain embodiments, the invention provides the method for the expression of regulating GCGR.In certain embodiments, this method comprises the short antisense compounds that uses one or more targeting GCGR nucleic acid, and wherein the short antisense compounds of this targeting GCGR nucleic acid is about 8 to about 16, preferably 9-15, more preferably 9-14, more preferably 10-14 monomer (promptly about 8 monomer to about 16 connections).Those of ordinary skills will appreciate that, this comprises the method that the short antisense compounds that uses one or more 8,9,10,11,12,13,14,15 or 16 monomeric targeting GCGR nucleic acid is regulated the expression of GCGR.
In certain embodiments, the method for adjusting GCGR comprises that using length is the short antisense compounds of 8 monomeric targeting GCGR nucleic acid.In certain embodiments, the method for adjusting GCGR comprises that using length is the short antisense compounds of 9 monomeric targeting GCGR nucleic acid.In certain embodiments, the method for adjusting GCGR comprises that using length is the short antisense compounds of 10 monomeric targeting GCGR nucleic acid.In certain embodiments, the method for adjusting GCGR comprises that using length is the short antisense compounds of 11 monomeric targeting GCGR nucleic acid.In certain embodiments, the method for adjusting GCGR comprises that using length is the short antisense compounds of 12 monomeric targeting GCGR nucleic acid.In certain embodiments, the method for adjusting GCGR comprises that using length is the short antisense compounds of 13 monomeric targeting GCGR nucleic acid.In certain embodiments, the method for adjusting GCGR comprises that using length is the short antisense compounds of 14 monomeric targeting GCGR nucleic acid.In certain embodiments, the method for adjusting GCGR comprises that using length is the short antisense compounds of 15 monomeric targeting GCGR nucleic acid.In certain embodiments, the method for adjusting GCGR comprises that using length is the short antisense compounds of 16 monomeric targeting GCGR nucleic acid.
In certain embodiments, the method for the expression of adjusting GCGR comprises that use comprises the short antisense compounds of 9-15 monomeric targeting GCGR nucleic acid.In certain embodiments, the method for the expression of adjusting GCGR comprises that use comprises the short antisense compounds of 10-15 monomeric targeting GCGR nucleic acid.In certain embodiments, the method for the expression of adjusting GCGR comprises that use comprises the short antisense compounds of 12-14 monomeric targeting GCGR nucleic acid.In certain embodiments, the method for the expression of adjusting GCGR comprises the short antisense compounds that uses the targeting GCGR nucleic acid that comprises 12-14 nucleotide or nucleoside.
8.DGAT2
DG transferring enzyme 2 (also claims DGAT2, DG O-transferring enzyme 2, acetyl-CoA: DG Acetylase 2) be proved and relate to the absorption process of triglyceride (also claiming triacylglycerol) from food.
Triglyceride is a very efficient process from the absorption of food, and it is undertaken by series of steps, meals triacylglycerol hydrolysis in enteric cavity in these steps, then in the middle of enterocyte by resynthesis.The resynthesis of triacylglycerol can be undertaken by the monoacylglycerol approach, and this approach is by monoacylglycerol acyltransferase (MGAT) catalysis diacylglycerol synthetic from monoacylglycerol and fatty acyl group-CoA.The alternative synthetic method of DG is provided by the phosphoglycerol approach, and this approach relates to bimolecular fatty acyl group-CoA and glycerol-3-phosphate coupling.In arbitrary situation, acidylate all takes place with the fatty acyl group-CoA of another molecule in DG then in by the catalytic reaction of one of two kinds of diacylglycerol acyltransferases, forms triglyceride (Farese et al.; Curr.Opin.Lipidol.; 2000,11,229-234).
By the catalytic reaction of diacylglycerol acyltransferase is the last and unique critical step of triglyceride in synthetic.Thus, diacylglycerol acyltransferase relates to the fat storage in intestinal fat absorption, lipoprotein assembling, plasma triglyceride concentration adjusting and the adipose cell.First kind of diacylglycerol acyltransferase is that DG transferring enzyme 1 was identified in nineteen sixty, encode this proteinic people and little musculus cdna separated (Cases et al., Proc.Natl.Acad.Sci.U.S.A., 1998 in 1998,95,13018-13023; Oelkers et al., J.Biol.Chem., 1998,273,26765-26771).The mice that lacks diacylglycerol acyltransferase 1 can survive, and still can pass through other biological approach synthetic glycerine three esters, this prompting exist multiple triglyceride synthesis mechanism (Smith et al., Nat.Genet., 2000,25,87-90).
Second kind of DG transferring enzyme is that DG transferring enzyme 2 (also claims DGAT2, DG O-transferring enzyme 2, acyl group-CoA: diacylglycerol acyltransferase 2) identify (Cases et al. subsequently in fungus Mortierella (Mortierella), people and mice, J.Biol.Chem., 2001,276,38870-38876; Lardizabal et al., J.Biol.Chem., 2001,276,38862-38869).Enzymatic determination shows that this protein of identifying recently has the DG transferase active really, this activity can utilize multiple long-chain fat acyl group-CoA substrate (Cases et al., J.Biol.Chem., 2001,276,38870-38876).
DG transferring enzyme 2 is members of the family of the irrelevant gene of its sequence and DG transferring enzyme 1.Except compare with DG transferring enzyme 1 on sequence different; external test proves that also DG transferring enzyme 2 has higher activity (Cases et al., J.Biol.Chem., 2001 under the magnesium chloride of low concentration and oleoyl-CoA; 276,38870-38876).The predicted protein matter sequence of DG transferring enzyme 2 contains the potential N-of at least one membrane spaning domain of inferring, three and connects glycosylation site, six total sites of potential Protein kinase C phosphorylation and infer the common sequence in phosphoglycerol site (Cases et al. in the acyltransferase with being present in; J.Biol.Chem.; 2001; 276,38870-38876).International radiation hybridization collection of illustrative plates committee (International RadiationHybrid Mapping Consortium) navigates to chromosome 11q13.3 with people's DG transferring enzyme 2.
In people tissue, in liver and white adipose tissue, detect the DG transferring enzyme 2 of top level, in mammary gland, testis and peripheral blood leucocyte level lower (Cases et al., J.Biol.Chem., 2001,276,38870-38876).In people's tissue, detect two kinds of mRNA of 2.4 and 1.8 kilobase, and the main DG transferring enzyme 2mRNA in the mouse tissue is 2.4 kilobase.Except liver and white adipose tissue; DG transferring enzyme 2 is also expressed in all sections of mouse small intestine; wherein in near-end intestinal (proximalintestine), express higher; in distal gut (distal intstine), express lower (Cases etal.; J.Biol.Chem.; 2001,276,38870-38876).
In the postnatal development process of rat liver, the DG transferase active demonstrates unique pattern.Because mRNA expresses and active pattern between do not have dependency, post translational modification may participate in DG transferring enzyme 2 active adjustings in the rat growth course (Waterman et al., J.Lipid.Res., 2002,43,1555-1562).
DG transferring enzyme 2mRNA preferentially raises by insulinize; this active external test of DG (Meegalla et al. that is confirmed by the cell membrane part of the mice adipose cell of measure cultivating; Biochem.Biophys.Res.Commun.; 2002; 298,317-323).In the mice of fasting, DG transferring enzyme 2 is expressed and is greatly reduced, and sharply increases during feeding once more.These two kinds of acetyl-CoA carboxylase and fatty acid synthase participate in the synthetic enzyme of fatty acid, and its expression pattern responds fasting and feeding more in a similar manner.These results are in conjunction with this observed result of DG transferring enzyme 2 expressed in abundance in liver; prompting DG transferring enzyme 2 and endogenous fatty acid route of synthesis be closely connected (Meegalla etal., Biochem.Biophys.Res.Commun., 2002; 298,317-323).
Provide such evidence to the research that has destructive mice in diacylglycerol acyltransferase 1 gene, promptly diacylglycerol acyltransferase 2 helps triglyceride synthetic.Intestinal in wild-type mice and DG transferring enzyme 1 deficient mice is in each stage, DG transferring enzyme 2mRNA expression levels similar (Buhman et al., J.Biol.Chem., 2002,277,25474-25479).Use magnesium chlorides such as Buhman are distinguished DG transferring enzyme 1 and 2 activity; observe in DG transferring enzyme 1 deficient mice; the DG transferase active is reduced to 50% in the near-end intestinal; in distal gut, be reduced to 10-15% (Buhman et al.; J.Biol.Chem.; 2002,277,25474-25479).
In addition, in the liver or fatty tissue of DG transferring enzyme 1 deficient mice, even behind the high fat diet in several weeks, DG transferring enzyme 2mRNA level is not raised (Cases et al., J.Biol.Chem., 2001 yet, 276,38870-38876; Chen etal., J.Clin.Invest., 2002,109,1049-1055).But; in ob/ob mice (it has the sudden change that can cause fat disease in the leptin gene); DG transferring enzyme 2 is than there being the more expression of height in wild-type mice, this prompting DG transferring enzyme 2 may cause the liparitosis that existing height accumulates in these mices on the part.In addition; the combinatorial mutagenesis of leptin and DG transferring enzyme 1; the level that can cause DG transferring enzyme 2 in the white adipose tissue to be expressed in the homologue with DG transferring enzyme 1 deficient mice is compared three times of (the Chen et al. that raise; J.Clin.Invest.; 2002; 109,1049-1055).DG transferring enzyme 2mRNA also in the skin of these mices, obtain raising (Chen et al., J.Clin.Invest., 2002,109,175-181).These Notes of Key Datas; leptin can be reduced DG transferring enzyme 2 usually and express; and the rise of DG transferring enzyme 2 in the white adipose tissue of these mices can give the triglyceride that still appears in leptin deficiency/DG transferring enzyme 1 deficient mice synthetic approach (the Chen et al. that alternative is provided; J.Clin.Invest.; 2002; 109,1049-1055).
Diacylglycerol acyltransferase 1 is rejected mice and is demonstrated attractive Phenotype, and promptly they are very lean, can resist the inductive obesity of meals, and the tissue triglycerides level reduces, to the sensitivity raising of insulin and leptin.Because it is synthetic that DG transferring enzyme 2 also participates in triglyceride, also can cause body fat content to reduce similarly to the interference of DG transferring enzyme 2.
Definition
" DGAT2 " means its expression and treats by lacking gene outcome or the protein that antisense compounds is regulated.
" DGAT2 nucleic acid " means the nucleic acid of any encoding D GAT2.For example, RNA sequence that in certain embodiments, DGAT2 nucleic acid includes but not limited to the DNA sequence of encoding D GAT2, transcribe from the DNA of encoding D GAT2 and the mRNA sequence of encoding D GAT2." DGAT2 mRNA " means the mRNA of encoding D GAT2.
The treatment indication
Antisense technology is to reduce the effective means that DGAT2 expresses, and has been proved to be in multiple therapeutic, diagnosis type and the application of research property to have unique applications.Thus, in certain embodiments, the invention provides targeting encoding D GAT2 nucleic acid, can regulate the short antisense compounds of the expression of DGAT2.This paper provides in addition and can effectively suppress the short antisense compounds that DGAT2 expresses.
In certain embodiments, the short antisense compounds of the nucleic acid by giving one or more targeting encoding D GAT2 is treated and is suspected the experimenter who suffers from DGAT2 diseases associated or disease.For example, in non-limiting embodiments, this abundant short antisense compounds of will treat effective dose that comprises gives the step of this animal.In some this embodiment, short antisense compounds can effectively suppress the active of DGAT2 or suppress the expression of DGAT2.In one embodiment, the active or expression of DGAT2 in the experimenter is suppressed at least 10%, at least 20%, at least 25%, at least 30%, at least 40%, at least 50%, at least 60%, at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 98%, at least 99% and at least 100%.In certain embodiments, the active or expression of DGAT2 in the experimenter is suppressed about 30%.More preferably, the active or expression of DGAT2 in the experimenter is suppressed 50% or more.
The reduction of the expression of DGAT2 can for example be measured in blood, blood plasma, serum, fatty tissue, liver or any other body fluid, tissue or the organ of this animal.Preferably, the central contained cell of this analyzed fluid, tissue or organ contains nucleic acid and/or the DGAT2 albumen itself of encoding D GAT2.
In certain embodiments, also provide medicine and other compositionss that comprise The compounds of this invention.For example, the short antisense compounds of targeting DGAT2 nucleic acid can be added to suitable medicine by certain chemical compound with effective dose can accept diluent or carrier, uses in pharmaceutical composition.
The short antisense compounds of some targeting DGAT2 can have short antisense compounds characteristic or feature any or that multiple this paper summarized.In certain embodiments, the short antisense compounds of targeting DGAT2 nucleic acid has and is selected from following die body (pterion-deoxidation interval-pterion): 1-12-1,1-1-10-2,2-10-1-1,3-10-3,2-10-3,2-10-2,1-10-1,1-10-2,3-8-3,2-8-2,1-8-1,3-6-3 or 1-6-1.In certain embodiments, the short antisense compounds of targeting DGAT2 nucleic acid has and is selected from following die body (pterion-deoxidation interval-pterion): 1-10-1,2-10-2 and 3-10-3.
This paper provides by short antisense compounds that gives one or more targeting DGAT2 nucleic acid or the pharmaceutical composition that comprises this chemical compound and treats individual method.Also provide by the short antisense compounds that gives targeting DGAT2 nucleic acid and treat the method for suffering from the experimenter of active diseases associated of DGAT2 or disease.Include but not limited to cardiovascular disease, obesity, diabetes, hypercholesterolemia and liver steatosis with DGAT2 diseases associated or disease.
The short antisense compounds of some targeting DGAT2 nucleic acid
In certain embodiments, lacking the antisense compounds targeting has
The DGAT2 nucleic acid of the sequence of searching number NM_032564.2 (being incorporated herein) with SEQ ID NO:10.
In some this embodiment, short antisense compounds and the SEQID NO:10 of targeting SEQ ID NO:10 have at least 90% complementarity.In some this embodiment, the short antisense compounds of targeting SEQ IDNO:10 and SEQ ID NO:10 have at least 95% complementarity.In some this embodiment, short antisense compounds and the SEQ IDNO:10 of targeting SEQ ID NO:10 have 100% complementarity.In certain embodiments, the short antisense compounds of targeting SEQ ID NO:10 comprises the nucleotide sequence that is selected from the nucleotide sequence that provides in table 14 and 15.
The nucleotide sequence that each SEQ ID NO provides in the table 14 and 15 is independent of any to connecting the modification of key or nuclear base between sugar moieties, nucleoside.Thus, the short antisense compounds that comprises the nucleotide sequence that provides in table 14 and 15 can comprise one or more to connecting the modification of key or nuclear base between sugar moieties, nucleoside independently.Isis number (Isis NO.) described antisense compounds represented the nuclear base sequence with one or more to connecting key between sugar moieties, nucleoside or examining the combination of the modification of base.
Table 14 and 15 has been enumerated the example of the short antisense compounds of targeting SEQ ID NO:10.Table 14 has been enumerated the short antisense compounds that 100% complementarity is arranged with SEQ ID NO:10.Table 15 has been enumerated the short antisense compounds that has one or two mispairing with respect to SEQ ID NO:10.The file that is marked with " gapmer die body " is represented the pterion of each short antisense compounds-at interval-pterion die body.Spacer segment comprises 2 '-deoxyribonucleotide, and each nucleotide of each pterion section comprises the sugar through 2 '-modification.The concrete sugar through 2 '-modification is also represented in " gapmer die body " file.For example, " 2-10-2 MOE " means 2-10-2 gapmer die body, and wherein the spacer segment both sides of 10 2 '-deoxyribonucleotides are connected to the pterion section of 2 nucleotide, and wherein the nucleotide of pterion section is 2 '-MOE nucleotide.Connecting key between nucleoside is thiophosphate.Short antisense compounds comprises the 5-methylcytidine that substitutes not modified cytosine, unless show " not modified cytosine " in the gapmer die body file, represented in this case cytosine is not modified cytosine.For example, " 5-mC is only in the interval " expression spacer segment has the 5-methylcytidine, and the pterion section has not modified cytosine.
Table 14: the short antisense compounds of targeting SEQ ID NO:10
| ISIS NO. | 5 ' target site | 3 ' target site | Sequence (5 '-3 ') | The Gapmer die body | SEQ ID NO |
| 372556 | 231 | 244 | ATGAGGGTCTTCAT | 2-10-2 MOE | 681 |
| 372557 | 249 | 262 | ACCCCGGAGTAGGC | 2-10-2 MOE | 682 |
| 382601 | 249 | 260 | CCCGGAGTAGGC | 1-10-1 MOE | 683 |
| 372480 | 251 | 266 | CAGGACCCCGGAGTAG | 3-10-3 MOE | 684 |
| 372481 | 252 | 267 | GCAGGACCCCGGAGTA | 3-10-3 MOE | 685 |
| 372558 | 252 | 265 | AGGACCCCGGAGTA | 2-10-2 MOE | 686 |
| 372559 | 253 | 266 | CAGGACCCCGGAGT | 2-10-2 MOE | 687 |
| 382603 | 331 | 342 | CAGACCCCTCGC | 1-10-1 MOE | 688 |
| 382604 | 361 | 372 | AGAGGATGCTGG | 1-10-1 MOE | 689 |
| 372485 | 392 | 407 | GAGCCAGGTGACAGAG | 3-10-3 MOE | 690 |
| 372563 | 393 | 406 | AGCCAGGTGACAGA | 2-10-2 MOE | 691 |
| 382605 | 397 | 408 | TGAGCCAGGTGA | 1-10-1 MOE | 692 |
| 372565 | 414 | 427 | TTTTCCACCTTGGA | 2-10-2 MOE | 693 |
| 382606 | 482 | 493 | CTGCAGGCCACT | 1-10-1 MOE | 694 |
| 372497 | 651 | 666 | TCACCAGCTGGATGGG | 3-10-3 MOE | 695 |
| 372498 | 652 | 667 | TTCACCAGCTGGATGG | 3-10-3 MOE | 696 |
| 372575 | 652 | 665 | CACCAGCTGGATGG | 2-10-2 MOE | 697 |
| 372576 | 653 | 666 | TCACCAGCTGGATG | 2-10-2 MOE | 698 |
| 382607 | 655 | 666 | TCACCAGCTGGA | 1-10-1 MOE | 699 |
| 372499 | 656 | 671 | TGTCTTCACCAGCTGG | 3-10-3 MOE | 700 |
| 372577 | 657 | 670 | GTCTTCACCAGCTG | 2-10-2 MOE | 701 |
| 372500 | 659 | 674 | GTGTGTCTTCACCAGC | 3-10-3 MOE | 702 |
| 372578 | 660 | 673 | TGTGTCTTCACCAG | 2-10-2 MOE | 703 |
| 372501 | 661 | 676 | TTGTGTGTCTTCACCA | 3-10-3 MOE | 704 |
| 372579 | 662 | 675 | TGTGTGTCTTCACC | 2-10-2 MOE | 705 |
| 372502 | 664 | 679 | AGGTTGTGTGTCTTCA | 3-10-3 MOE | 706 |
| 372580 | 665 | 678 | GGTTGTGTGTCTTC | 2-10-2 MOE | 707 |
| 372503 | 666 | 681 | GCAGGTTGTGTGTCTT | 3-10-3 MOE | 708 |
| 372581 | 667 | 680 | CAGGTTGTGTGTCT | 2-10-2 MOE | 709 |
| 372504 | 669 | 684 | TCAGCAGGTTGTGTGT | 3-10-3 MOE | 710 |
| 372582 | 670 | 683 | CAGCAGGTTGTGTG | 2-10-2 MOE | 711 |
| 372505 | 671 | 686 | GGTCAGCAGGTTGTGT | 3-10-3 MOE | 712 |
| 372506 | 672 | 687 | TGGTCAGCAGGTTGTG | 3-10-3 MOE | 713 |
| 372583 | 672 | 685 | GTCAGCAGGTTGTG | 2-10-2 MOE | 714 |
| 372584 | 673 | 686 | GGTCAGCAGGTTGT | 2-10-2 MOE | 715 |
| 372507 | 676 | 691 | CTGGTGGTCAGCAGGT | 3-10-3 MOE | 716 |
| 372585 | 677 | 690 | TGGTGGTCAGCAGG | 2-10-2 MOE | 717 |
| 382608 | 680 | 691 | CTGGTGGTCAGC | 1-10-1 MOE | 718 |
| 372508 | 681 | 696 | AGTTCCTGGTGGTCAG | 3-10-3 MOE | 719 |
| 372586 | 682 | 695 | GTTCCTGGTGGTCA | 2-10-2 MOE | 720 |
| 372509 | 684 | 699 | TATAGTTCCTGGTGGT | 3-10-3 MOE | 721 |
| 372587 | 685 | 698 | ATAGTTCCTGGTGG | 2-10-2 MOE | 722 |
| 372510 | 686 | 701 | GATATAGTTCCTGGTG | 3-10-3 MOE | 723 |
| 372588 | 687 | 700 | ATATAGTTCCTGGT | 2-10-2 MOE | 724 |
| 372511 | 691 | 706 | CCAAAGATATAGTTCC | 3-10-3 MOE | 725 |
| 372512 | 692 | 707 | TCCAAAGATATAGTTC | 3-10-3 MOE | 726 |
| 372589 | 692 | 705 | CAAAGATATAGTTC | 2-10-2 MOE | 727 |
| 372590 | 693 | 706 | CCAAAGATATAGTT | 2-10-2 MOE | 728 |
| 382609 | 724 | 735 | CCAGGCCCATGA | 1-10-1 MOE | 729 |
| 372514 | 725 | 740 | GGCACCCAGGCCCATG | 3-10-3 MOE | 730 |
| 372592 | 726 | 739 | GCACCCAGGCCCAT | 2-10-2 MOE | 731 |
| 372515 | 730 | 745 | CAGAAGGCACCCAGGC | 3-10-3 MOE | 732 |
| 372593 | 731 | 744 | AGAAGGCACCCAGG | 2-10-2 MOE | 733 |
| 382610 | 851 | 862 | CCAGACATCAGG | 1-10-1 MOE | 734 |
| 382611 | 867 | 878 | GACAGGGCAGAT | 1-10-1 MOE | 735 |
| 382602 | 868 | 879 | TGACAGGGCAGA | 1-10-1 MOE | 736 |
| 382612 | 911 | 922 | CCACTCCCATTC | 1-10-1 MOE | 737 |
| 372524 | 965 | 980 | GCCAGGCATGGAGCTC | 3-10-3 MOE | 738 |
| 372602 | 966 | 979 | CCAGGCATGGAGCT | 2-10-2 MOE | 739 |
| 382613 | 968 | 979 | CCAGGCATGGAG | 1-10-1 MOE | 740 |
| 382614 | 987 | 998 | CAGGGTGACTGC | 1-10-1 MOE | 741 |
| 372525 | 989 | 1004 | GTTCCGCAGGGTGACT | 3-10-3 MOE | 742 |
| 372603 | 990 | 1003 | TTCCGCAGGGTGAC | 2-10-2 MOE | 743 |
| 372526 | 992 | 1007 | GCGGTTCCGCAGGGTG | 3-10-3 MOE | 744 |
| 372604 | 993 | 1006 | CGGTTCCGCAGGGT | 2-10-2 MOE | 745 |
| 372530 | 1106 | 1121 | TCGGCCCCAGGAGCCC | 3-10-3 MOE | 746 |
| 372608 | 1107 | 1120 | CGGCCCCAGGAGCC | 2-10-2 MOE | 747 |
| 372531 | 1109 | 1124 | CCATCGGCCCCAGGAG | 3-10-3 MOE | 748 |
| 372609 | 1110 | 1123 | CATCGGCCCCAGGA | 2-10-2 MOE | 749 |
| 372532 | 1112 | 1127 | GACCCATCGGCCCCAG | 3-10-3 MOE | 750 |
| 372610 | 1113 | 1126 | ACCCATCGGCCCCA | 2-10-2 MOE | 751 |
| 372533 | 1117 | 1132 | TTCTGGACCCATCGGC | 3-10-3 MOE | 752 |
| 382615 | 1117 | 1128 | GGACCCATCGGC | 1-10-1 MOE | 753 |
| 372611 | 1118 | 1131 | TCTGGACCCATCGG | 2-10-2 MOE | 754 |
| 372536 | 1199 | 1214 | CACCAGCCCCCAGGTG | 3-10-3 MOE | 755 |
| 372614 | 1200 | 1213 | ACCAGCCCCCAGGT | 2-10-2 MOE | 756 |
| 372537 | 1204 | 1219 | TAGGGCACCAGCCCCC | 3-10-3 MOE | 757 |
| 372615 | 1205 | 1218 | AGGGCACCAGCCCC | 2-10-2 MOE | 758 |
| 372538 | 1209 | 1224 | TGGAGTAGGGCACCAG | 3-10-3 MOE | 759 |
| 372616 | 1210 | 1223 | GGAGTAGGGCACCA | 2-10-2 MOE | 760 |
| 382616 | 1215 | 1226 | CTTGGAGTAGGG | 1-10-1 MOE | 761 |
| 372539 | 1218 | 1233 | TGATGGGCTTGGAGTA | 3-10-3 MOE | 762 |
| 372617 | 1219 | 1232 | GATGGGCTTGGAGT | 2-10-2 MOE | 763 |
| 372540 | 1293 | 1308 | TGTGGTACAGGTCGAT | 3-10-3 MOE | 764 |
| 372618 | 1294 | 1307 | GTGGTACAGGTCGA | 2-10-2 MOE | 765 |
| 382617 | 1294 | 1305 | GGTACAGGTCGA | 1-10-1 MOE | 766 |
| 372541 | 1295 | 1310 | GGTGTGGTACAGGTCG | 3-10-3 MOE | 767 |
| 372619 | 1296 | 1309 | GTGTGGTACAGGTC | 2-10-2 MOE | 768 |
| 372542 | 1298 | 1313 | CATGGTGTGGTACAGG | 3-10-3 MOE | 769 |
| 372620 | 1299 | 1312 | ATGGTGTGGTACAG | 2-10-2 MOE | 770 |
| 372543 | 1300 | 1315 | TACATGGTGTGGTACA | 3-10-3 MOE | 771 |
| 372621 | 1301 | 1314 | ACATGGTGTGGTAC | 2-10-2 MOE | 772 |
| 372544 | 1303 | 1318 | ATGTACATGGTGTGGT | 3-10-3 MOE | 773 |
| 372622 | 1304 | 1317 | TGTACATGGTGTGG | 2-10-2 MOE | 774 |
| 382618 | 1313 | 1324 | GCCTCCATGTAC | 1-10-1 MOE | 775 |
| 382619 | 1325 | 1336 | AGCTTCACCAGG | 1-10-1 MOE | 776 |
| 382620 | 1383 | 1394 | GTTCACCTCCAG | 1-10-1 MOE | 777 |
Table 15: targeting SEQ ID NO:10 and have the short antisense compounds of 1 or 2 mispairing
| ISIS NO | 5 ' target site | 3 ' target site | Sequence (5 '-3 ') | The Gapmer die body | SEQ ID NO |
| 372608 | 151 | 164 | CGGCCCCAGGAGCC | 2-10-2 MOE | 747 |
| 372474 | 156 | 171 | CATGCCCCAGCCGCCG | 3-10-3 MOE | 778 |
| 372552 | 157 | 170 | ATGCCCCAGCCGCC | 2-10-2 MOE | 779 |
| 382609 | 167 | 178 | CCAGGCCCATGA | 1-10-1 MOE | 729 |
| 372478 | 230 | 245 | GATGAGGGTCTTCATG | 3-10-3 MOE | 780 |
| 372479 | 248 | 263 | GACCCCGGAGTAGGCA | 3-10-3 MOE | 781 |
| 382611 | 317 | 328 | GACAGGGCAGAT | 1-10-1 MOE | 735 |
| 372483 | 352 | 367 | ATGCTGGAGCCAGTGC | 3-10-3 MOE | 782 |
| 372561 | 353 | 366 | TGCTGGAGCCAGTG | 2-10-2 MOE | 783 |
| 372562 | 373 | 386 | GTCTTGGAGGGCCG | 2-10-2 MOE | 784 |
| 382602 | 388 | 399 | TGACAGGGCAGA | 1-10-1 MOE | 736 |
| 372613 | 392 | 405 | CCCAGGTGTCAGAG | 2-10-2 MOE | 785 |
| 372486 | 412 | 427 | TTTTCCACCTTGGATC | 3-10-3 MOE | 786 |
| 372564 | 413 | 426 | TTTCCACCTTGGAT | 2-10-2 MOE | 787 |
| 372487 | 413 | 428 | TTTTTCCACCTTGGAT | 3-10-3 MOE | 788 |
| 372488 | 418 | 433 | AGGTGTTTTTCCACCT | 3-10-3 MOE | 789 |
| 372566 | 419 | 432 | GGTGTTTTTCCACC | 2-10-2 MOE | 790 |
| 372489 | 459 | 474 | CCAGGAAGGATAGGAC | 3-10-3 MOE | 791 |
| 372567 | 460 | 473 | CAGGAAGGATAGGA | 2-10-2 MOE | 792 |
| 382612 | 475 | 486 | CCACTCCCATTC | 1-10-1 MOE | 737 |
| 372490 | 483 | 498 | TGACACTGCAGGCCAC | 3-10-3 MOE | 793 |
| 372568 | 484 | 497 | GACACTGCAGGCCA | 2-10-2 MOE | 794 |
| 372491 | 492 | 507 | ACATGAGGATGACACT | 3-10-3 MOE | 795 |
| 372569 | 493 | 506 | CATGAGGATGACAC | 2-10-2 MOE | 796 |
| 372492 | 503 | 518 | GCAGAAGGTGTACATG | 3-10-3 MOE | 797 |
| 372570 | 504 | 517 | CAGAAGGTGTACAT | 2-10-2 MOE | 798 |
| 372493 | 512 | 527 | GCAGTCAGTGCAGAAG | 3-10-3 MOE | 799 |
| 372571 | 513 | 526 | CAGTCAGTGCAGAA | 2-10-2 MOE | 800 |
| 372496 | 612 | 627 | ACACGGCCCAGTTTCG | 3-10-3 MOE | 801 |
| 372574 | 613 | 626 | CACGGCCCAGTTTC | 2-10-2 MOE | 802 |
| 372513 | 717 | 732 | GGCCCATGATGCCATG | 3-10-3 MOE | 803 |
| 372591 | 718 | 731 | GCCCATGATGCCAT | 2-10-2 MOE | 804 |
| 372516 | 732 | 747 | TACAGAAGGCACCCAG | 3-10-3 MOE | 805 |
| 372594 | 733 | 746 | ACAGAAGGCACCCA | 2-10-2 MOE | 806 |
| 372518 | 812 | 827 | GAAGTTGCCAGCCAAT | 3-10-3 MOE | 807 |
| 372596 | 813 | 826 | AAGTTGCCAGCCAA | 2-10-2 MOE | 808 |
| 372560 | 863 | 876 | CAGGGCAGATCCTT | 2-10-2 MOE | 809 |
| 372519 | 887 | 902 | CAAGTAGTCTATGGTG | 3-10-3 MOE | 810 |
| 372597 | 888 | 901 | AAGTAGTCTATGGT | 2-10-2 MOE | 811 |
| 372520 | 894 | 909 | TGGAAAGCAAGTAGTC | 3-10-3 MOE | 812 |
| 372598 | 895 | 908 | GGAAAGCAAGTAGT | 2-10-2 MOE | 813 |
| 372527 | 1013 | 1028 | GGCCAGCTTTACAAAG | 3-10-3 MOE | 814 |
| 372605 | 1014 | 1027 | GCCAGCTTTACAAA | 2-10-2 MOE | 815 |
| 372606 | 1020 | 1033 | CGCAGGGCCAGCTT | 2-10-2 MOE | 816 |
| 372529 | 1052 | 1067 | AAAGGAATAGGTGGGA | 3-10-3 MOE | 817 |
| 372607 | 1053 | 1066 | AAGGAATAGGTGGG | 2-10-2 MOE | 818 |
| 372534 | 1144 | 1159 | GCGAAACCAATATACT | 3-10-3 MOE | 819 |
| 372612 | 1145 | 1158 | CGAAACCAATATAC | 2-10-2 MOE | 820 |
| 372535 | 1192 | 1207 | CCCCAGGTGTCAGAGG | 3-10-3 MOE | 821 |
| 372613 | 1193 | 1206 | CCCAGGTGTCAGAG | 2-10-2 MOE | 822 |
| 372545 | 1332 | 1347 | GATTGTCAAAGAGCTT | 3-10-3 MOE | 823 |
| 372623 | 1333 | 1346 | ATTGTCAAAGAGCT | 2-10-2 MOE | 824 |
| 372546 | 1342 | 1357 | TTGGTCTTGTGATTGT | 3-10-3 MOE | 825 |
| 372624 | 1343 | 1356 | TGGTCTTGTGATTG | 2-10-2 MOE | 826 |
| 372547 | 1352 | 1367 | AAGGCCGAATTTGGTC | 3-10-3 MOE | 827 |
| 372625 | 1353 | 1366 | AGGCCGAATTTGGT | 2-10-2 MOE | 828 |
| 382601 | 1617 | 1628 | CCCGGAGTAGGC | 1-10-1 MOE | 683 |
| 382606 | 1971 | 1982 | CTGCAGGCCACT | 1-10-1 MOE | 694 |
| 382612 | 1988 | 1999 | CCACTCCCATTC | 1-10-1 MOE | 737 |
In certain embodiments, the target zone is the nucleotide 231-267 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 231-267 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 231-267 comprises the nucleotide sequence that is selected from SEQ ID NO 681,682,683,684,685,686 or 687.In some this embodiment, the short antisense compounds of the nucleotide 231-267 of targeting SEQ ID NO:10 is selected from Isis No 372556,372557,382601,372480,372481,372558 or 372559.
In certain embodiments, the target zone is the nucleotide 249-267 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 249-267 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 249-267 comprises the nucleotide sequence that is selected from SEQ ID NO 683,684,685,686 or 687.In some this embodiment, the short antisense compounds of the nucleotide 249-267 of targeting SEQ ID NO:10 is selected from Isis No 382601,372480,372481,372558 or 372559.
In certain embodiments, the target zone is the nucleotide 331-493 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 331-493 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 331-493 comprises the nucleotide sequence that is selected from SEQ ID NO 688,689,690,691,692,693 or 694.In some this embodiment, the short antisense compounds of the nucleotide 331-493 of targeting SEQ ID NO:10 is selected from Isis No 382603,382604,372485,372563,382605,372565 or 382606.
In certain embodiments, the target zone is the nucleotide 331-427 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 331-427 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 331-427 comprises the nucleotide sequence that is selected from SEQ ID NO 688,689,690,691,692 or 693.In some this embodiment, the short antisense compounds of the nucleotide 331-427 of targeting SEQ ID NO:10 is selected from Isis No 382603,382604,372485,372563,382605 or 372565.
In certain embodiments, the target zone is the nucleotide 392-408 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 392-408 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 392-408 comprises the nucleotide sequence that is selected from SEQ ID NO 690,691 or 692.In some this embodiment, the short antisense compounds of the nucleotide 392-408 of targeting SEQ ID NO:10 is selected from Isis No 372485,372563 or 382605.
In certain embodiments, the target zone is the nucleotide 651-707 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 651-707 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 651-707 comprises the nucleotide sequence that is selected from SEQ ID NO 695,696,697,698,699,700,701,702,703,704,705,706,707,708,709,710,711,712,713,714,715,716,717,718,719,720,721,722,723,724,725,726,727 or 728.In some this embodiment, the short antisense compounds of the nucleotide 651-707 of targeting SEQ ID NO:10 is selected from Isis No372497,372498,372575,372576,382607,372499,372577,372500,372578,372501,372579,372502,372580,372503,372581,372504,372582,372505,372506,372583,372584,372507,372585,382608,372508,372586,372509,372587,372510,372588,372511,372512,372589 or 372590.
In certain embodiments, the target zone is the nucleotide 724-745 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 724-745 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 724-745 comprises the nucleotide sequence that is selected from SEQ ID NO 729,730,731,732 or 733.In some this embodiment, the short antisense compounds of the nucleotide 724-745 of targeting SEQ ID NO:10 is selected from Isis No 382609,372514,372592,372515 or 372593.
In certain embodiments, the target zone is the nucleotide 651-745 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 651-745 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 651-745 comprises the nucleotide sequence that is selected from SEQ ID NO 695,696,697,698,699,700,701,702,703,704,705,706,707,708,709,710,711,712,713,714,715,716,717,718,719,720,721,722,723,724,725,726,727,728,729,730,731,732 or 733.In some this embodiment, the short antisense compounds of the nucleotide 651-745 of targeting SEQ ID NO:10 is selected from Isis No 372497,372498,372575,372576,382607,372499,372577,372500,372578,372501,372579,372502,372580,372503,372581,372504,372582,372505,372506,372583,372584,372507,372585,382608,372508,372586,372509,372587,372510,372588,372511,372512,372589,372590,382609,372514,372592,372515 or 372593.
In certain embodiments, the target zone is the nucleotide 851-922 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 851-922 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 851-922 comprises the nucleotide sequence that is selected from SEQ ID NO 734,735,736 or 737.In some this embodiment, the short antisense compounds of the nucleotide 851-922 of targeting SEQ ID NO:10 is selected from Isis No 382610,382611,382602 or 382612.
In certain embodiments, the target zone is the nucleotide 851-879 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 851-879 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 851-879 comprises the nucleotide sequence that is selected from SEQ ID NO 734,735 or 736.In some this embodiment, the short antisense compounds of the nucleotide 851-879 of targeting SEQ ID NO:10 is selected from Isis No 382610,382611 or 382602.
In certain embodiments, the target zone is the nucleotide 965-1007 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 965-1007 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 965-1007 comprises the nucleotide sequence that is selected from SEQ ID NO 738,739,740,741,742,743,744 or 745.In some this embodiment, the short antisense compounds of the nucleotide 965-1007 of targeting SEQ ID NO:10 is selected from Isis No 372524,372602,382613,382614,372525,372603,372526 or 372604.
In certain embodiments, the target zone is the nucleotide 965-979 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 965-979 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 965-979 comprises the nucleotide sequence that is selected from SEQ ID NO 738,739 or 740.In some this embodiment, the short antisense compounds of the nucleotide 965-979 of targeting SEQ ID NO:10 is selected from Isis No 372524,372602 or 382613.
In certain embodiments, the target zone is the nucleotide 987-1007 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 987-1007 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 987-1007 comprises the nucleotide sequence that is selected from SEQ ID NO 741,742,743,744 or 745.In some this embodiment, the short antisense compounds of the nucleotide 987-1007 of targeting SEQ ID NO:10 is selected from Isis No 382614,372525,372603,372526 or 372604.
In certain embodiments, the target zone is the nucleotide 1106-1132 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 1106-1132 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 1106-1132 comprises the nucleotide sequence that is selected from SEQ ID NO 746,747,748,749,750,751,752,753 or 754.In some this embodiment, the short antisense compounds of the nucleotide 1106-1132 of targeting SEQ IDNO:10 is selected from Isis No 372530,372608,372531,372609,372532,372610,372533,382615 or 372611.
In certain embodiments, the target zone is the nucleotide 1199-1233 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 1199-1233 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 1199-1233 comprises the nucleotide sequence that is selected from SEQ ID NO 755,756,757,758,759,760,761,762 or 763.In some this embodiment, the short antisense compounds of the nucleotide 1199-1233 of targeting SEQ IDNO:10 is selected from Isis No 372536,372614,372537,372615,372538,372616,382616,372539 or 372617.
In certain embodiments, the target zone is the nucleotide 1293-1394 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 1293-1394 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 1293-1394 comprises the nucleotide sequence that is selected from SEQ ID NO 764,765,766,767,768,769,770,771,772,773,774,775,776 or 777.In some this embodiment, the short antisense compounds of the nucleotide 1293-1394 of targeting SEQ ID NO:10 is selected from Isis No 372540,372618,382617,372541,372619,372542,372620,372543,372621,372544,372622,382618,382619 or 382620.
In certain embodiments, the target zone is the nucleotide 1293-1336 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 1293-1336 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 1293-1336 comprises the nucleotide sequence that is selected from SEQ ID NO 764,765,766,767,768,769,770,771,772,773,774,775 or 776.In some this embodiment, the short antisense compounds of the nucleotide 1293-1336 of targeting SEQ ID NO:10 is selected from Isis No 372540,372618,382617,372541,372619,372542,372620,372543,372621,372544,372622,382618 or 382619.
In certain embodiments, the target zone is the nucleotide 1293-1324 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 1293-1324 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 1293-1324 comprises the nucleotide sequence that is selected from SEQ ID NO 764,765,766,767,768,769,770,771,772,773,774 or 775.In some this embodiment, the short antisense compounds of the nucleotide 1293-1324 of targeting SEQ ID NO:10 is selected from Isis No 372540,372618,382617,372541,372619,372542,372620,372543,372621,372544,372622 or 382618.
In certain embodiments, its length of short antisense compounds of targeting DGAT2 nucleic acid is 8-16, preferred 9-15, more preferably 9-14, more preferably 10-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting DGAT2 nucleic acid is 9-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting DGAT2 nucleic acid is 10-14 nucleotide.In certain embodiments, this short antisense compounds is short antisense oligonucleotide.
In certain embodiments, the short antisense compounds of targeting DGAT2 nucleic acid is short gapmer.In some this embodiment, comprise at least one high-affinity in the short gapmer of targeting DGAT2 nucleic acid one or more pterions therein and modify.In certain embodiments, the short antisense compounds of targeting DGAT2 nucleic acid comprises 1-3 high-affinity modification in each pterion.In some this embodiment, the nucleoside in pterion or nucleotide comprise 2 ' and modify.In some this embodiment, the monomer in pterion is BNA.In some this embodiment, the monomer in pterion is selected from α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA, β-D-methylene oxygen base (4 '-CH2-O-2 ') BNA, ethyleneoxy group (4 '-(CH2)2-O-2 ') BNA, amino oxygen base (4 '-CH2-O-N (R)-2 ') BNA and oxygen base amino (4 '-CH2-N (R)-O-2 ') BNA.In certain embodiments, the monomer in pterion comprises in 2 ' position and is selected from following substituent group: pi-allyl, amino, azido, thio group, O-pi-allyl, O-C1-C10Alkyl ,-OCF3, O-(CH2)2-O-CH3, 2 '-O (CH2)2SCH3, O-(CH2)2-O-N (Rm) (Rn) and O-CH2-C (=O)-N (Rm) (Rn), each R whereinmAnd RnIndependent is H or substituted or unsubstituted C1-C10Alkyl.In certain embodiments, the monomer in pterion is 2 ' MOE nucleotide.
In certain embodiments, the short antisense compounds of targeting DGAT2 nucleic acid comprises between 5 ' pterion and 3 ' pterion at interval.In certain embodiments, comprise 5,6,7,8,9,10,11,12,13 or 14 monomers at interval.In certain embodiments, Jian Ge monomer is not modified deoxyribonucleotide.In certain embodiments, Jian Ge monomer is not modified ribonucleotide.In certain embodiments, modify (if any) at interval and cause producing such antisense compounds, when in conjunction with its target nucleic acids, this chemical compound can be supported the cutting of RNA enzyme (including but not limited to RNA enzyme H).
In certain embodiments, the short antisense compounds of targeting DGAT2 nucleic acid has the same Dan Julian key.In some this embodiment, these keys all are that thiophosphate connects key.In certain embodiments, Lian Jian is that di-phosphate ester connects key.In certain embodiments, the short antisense compounds of targeting DGAT2 nucleic acid has mixed matrix.
In certain embodiments, its length of short antisense compounds of targeting DGAT2 nucleic acid is 8 monomers.In certain embodiments, its length of short antisense compounds of targeting DGAT2 nucleic acid is 9 monomers.In certain embodiments, its length of short antisense compounds of targeting DGAT2 nucleic acid is 19 monomers.In certain embodiments, its length of short antisense compounds of targeting DGAT2 nucleic acid is 11 monomers.In certain embodiments, its length of short antisense compounds of targeting DGAT2 nucleic acid is 12 monomers.In certain embodiments, its length of short antisense compounds of targeting DGAT2 nucleic acid is 13 monomers.In certain embodiments, its length of short antisense compounds of targeting DGAT2 nucleic acid is 14 monomers.In certain embodiments, its length of short antisense compounds of targeting DGAT2 nucleic acid is 15 monomers.In certain embodiments, its length of short antisense compounds of targeting DGAT2 nucleic acid is 16 monomers.In certain embodiments, the short antisense compounds of targeting DGAT2 nucleic acid comprises 9-15 monomer.In certain embodiments, the short antisense compounds of targeting DGAT2 nucleic acid comprises 10-15 monomer.In certain embodiments, the short antisense compounds of targeting DGAT2 nucleic acid comprises 12-14 monomer.In certain embodiments, the short antisense compounds of targeting DGAT2 nucleic acid comprises 12-14 nucleotide or nucleoside.
In certain embodiments, the invention provides the method for the expression of regulating DGAT2.In certain embodiments, this method comprises the short antisense compounds that uses one or more targeting DGAT2 nucleic acid, and wherein the short antisense compounds of this targeting DGAT2 nucleic acid is about 8 to about 16, preferably 9-15, more preferably 9-14, more preferably 10-14 monomer (promptly about 8 monomer to about 16 connections).Those of ordinary skills will appreciate that, this comprises the method that the short antisense compounds that uses one or more 8,9,10,11,12,13,14,15 or 16 monomeric targeting DGAT2 nucleic acid is regulated the expression of DGAT2.
In certain embodiments, the method for adjusting DGAT2 comprises that using length is the short antisense compounds of 8 monomeric targeting DGAT2 nucleic acid.In certain embodiments, the method for adjusting DGAT2 comprises that using length is the short antisense compounds of 9 monomeric targeting DGAT2 nucleic acid.In certain embodiments, the method for adjusting DGAT2 comprises that using length is the short antisense compounds of 10 monomeric targeting DGAT2 nucleic acid.In certain embodiments, the method for adjusting DGAT2 comprises that using length is the short antisense compounds of 11 monomeric targeting DGAT2 nucleic acid.In certain embodiments, the method for adjusting DGAT2 comprises that using length is the short antisense compounds of 12 monomeric targeting DGAT2 nucleic acid.In certain embodiments, the method for adjusting DGAT2 comprises that using length is the short antisense compounds of 13 monomeric targeting DGAT2 nucleic acid.In certain embodiments, the method for adjusting DGAT2 comprises that using length is the short antisense compounds of 14 monomeric targeting DGAT2 nucleic acid.In certain embodiments, the method for adjusting DGAT2 comprises that using length is the short antisense compounds of 15 monomeric targeting DGAT2 nucleic acid.In certain embodiments, the method for adjusting DGAT2 comprises that using length is the short antisense compounds of 16 monomeric targeting DGAT2 nucleic acid.
In certain embodiments, the method for the expression of adjusting DGAT2 comprises that use comprises the short antisense compounds of 9-15 monomeric targeting DGAT2 nucleic acid.In certain embodiments, the method for the expression of adjusting DGAT2 comprises that use comprises the short antisense compounds of 10-15 monomeric targeting DGAT2 nucleic acid.In certain embodiments, the method for the expression of adjusting DGAT2 comprises that use comprises the short antisense compounds of 12-14 monomeric targeting DGAT2 nucleic acid.In certain embodiments, the method for the expression of adjusting DGAT2 comprises the short antisense compounds that uses the targeting DGAT2 nucleic acid that comprises 12-14 nucleotide or nucleoside.
9.PTP1B
PTP1B (also claiming protein phosphatase 1 B and PTPN1) is endoplasmic reticulum (ER) relevant enzyme, is as the main protein tyrosine phosphatase of people's Placenta Hominis separated (Tonks et al., J.Biol.Chem., 1988,263,6731-6737 at first; Tonks et al., J.Biol.Chem., 1988,263,6722-6730).
The clear and definite necessary regulating action of PTP1B in the Insulin receptor INSR Mediated Signal Transduction.In some cases, PTP1B is external and can both take place to interact and with its dephosphorylation, cause downward modulation (the Goldstein et al. of signal transduction pathway with activatory Insulin receptor INSR in intact cell, Mol.Cell.Biochem, 1998,182,91-99; Seely et al., Diabetes, 1996,45,1379-1385).In addition, PTP1B can regulate insulin the mitogenesis effect (Goldstein et al., Mol.Cell.Biochem, 1998,182,91-99).In the rat fat cell of overexpression PTP1B, the transposition of GLUT4 glucose transporter is suppressed, this hint PTP1B also be glucose transport negative growth factor (Chen etal., J.Biol.Chem., 1997,272,8026-8031).
The mice that lacks the PTP1B gene is rejected the negative adjusting that model shows that also PTP1B transduces to insulin signaling.The mice that has ruined PTP1B gene demonstrates insulin sensitivity increase and the increase of Insulin receptor INSR phosphorylation.PTP1B-/-mice when being given high fat diet, can resist weight increase and keep insulin sensitivity (Elchebly et al., Science, 1999,283,1544-1548).The obvious establishment of these researchs PTP1B is the treatment target in diabetes and the bariatrician.
Diabetes and obesity (being generically and collectively referred to as " sugared fat disease (diabesity) " now sometimes) are inter-related.Most of human obesity diseases are relevant with the leptin resistance with insulin resistance.In fact, obesity may than diabetes itself to the influence of insulin action bigger (Sindelka et al., Physiol Res., 2002,51,85-91).Syndrome X or metabolic syndrome are the new terminologies of such one group of disease, and this group disease can show the tendency that development diabetes and cardiovascular disease are arranged when occurring together.These symptoms comprise hypertension, high triglyceride, low HDL and obesity, tend to occur together in some individualities.Because the effect of PTP1B in diabetes and obesity, it has been considered to comprise the treatment target of the multiple metabolic disorder of diabetes, obesity and metabolic syndrome.By improving blood-glucose control, the inhibitor of PTP1B also can be used for slowing down, prevent, postponing or improve the sequela of diabetes, and these sequela comprise retinopathy, neuropathy, cardiovascular complication and nephropathy.
In the cell cycle process, be subjected to difference and regulate (Schievella et al., Cell.GrowthDiffer., 1993,4, PTP1B 239-246), in insulin sensitivity sex organization, be expressed as two kinds of different isotypes, these two kinds of isotypes are the generation of road montage (alternate splicing) in addition (Shifrin and Neel, J.Biol.Chem., 1993 by pre-mRNA, 268,25376-25384).In addition the ratio of the product of road montage is subjected to the influence of somatomedin such as insulin, variously be subjected to have nothing in common with each other in the inspection tissue (Sell and Reese, Mol.Genet.Metab., 1999,66,189-192).In these researchs, the level of each variant is relevant with the body fat percentage rate with plasma insulin concentration.Therefore these variants can be used as chronic hyperinsulinemia and type ii diabetes patient's biological marker.
Definition
" Protein Tyrosine Phosphatases 1B " is that its expression is treated by lacking gene outcome or the protein that antisense compounds is regulated.Protein Tyrosine Phosphatases 1B is commonly referred to PTP1B, but also can be described as Protein Tyrosine Phosphatases; PTPN1; RKPTP; Protein Tyrosine Phosphatases, non-receptor type 1.
" PTP1B nucleic acid " means the nucleic acid of any coding PTP1B.For example, in certain embodiments, PTP1B nucleic acid include but not limited to the to encode DNA sequence of PTP1B, the RNA sequence of transcribing from the DNA of coding PTP1B and the mRNA sequence of coding PTP1B.
" PTP1B mRNA " means the proteic mRNA of coding PTP1B.
The treatment indication
Antisense technology is to reduce the effective means that PTP1B expresses, and has been proved to be in multiple therapeutic, diagnosis type and the application of research property to have unique applications.Thus, in certain embodiments, the invention provides targeting coding PTP1B nucleic acid, can regulate the short antisense compounds of the expression of PTP1B.This paper provides in addition and can effectively suppress the short antisense compounds that PTP1B expresses.
In some treatment, the short antisense compounds of the nucleic acid by giving one or more targeting coding PTP1B is treated and is suspected to suffer from the disease that can treat by the expression of adjusting PTP1B or the experimenter of disease.For example, in non-limiting embodiments, described method comprises that the short antisense compounds with the treatment effective dose gives the step of animal.Short antisense compounds of the present invention can effectively suppress the active of PTP1B and/or suppress the expression of PTP1B.In one embodiment, the active or expression of the PTP1B among the experimenter is suppressed and reaches at least 10%, at least 20%, at least 25%, at least 30%, at least 40%, at least 50%, at least 60%, at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 98%, at least 99% or 100%.In certain embodiments, the active or expression of the PTP1B among the experimenter is suppressed and reaches about 30%.In certain embodiments, the active or expression of the PTP1B among the experimenter is suppressed and reaches at least 50% or more.
The reduction of the expression of PTP1B can for example be measured in blood, blood plasma, serum, fatty tissue, liver or any other body fluid, tissue or the organ of this animal.Preferably, the central contained cell of described analyzed fluid, tissue or organ contains nucleic acid and/or the PTP1B albumen itself of the PTP1B that encodes.
Some medicine that comprises The compounds of this invention and other compositionss also are provided.In certain embodiments, the short antisense compounds of targeting PTP1B nucleic acid is to be added to suitable medicine by certain chemical compound with effective dose can accept diluent or carrier, uses in pharmaceutical composition.
The short antisense compounds of targeting PTP1B nucleic acid can have short antisense compounds characteristic or feature any or that multiple this paper summarized.In certain embodiments, the short antisense compounds of targeting PTP1B nucleic acid has and is selected from following die body (pterion-deoxidation interval-pterion): 1-12-1,1-1-10-2,2-10-1-1,3-10-3,2-10-3,2-10-2,1-10-1,1-10-2,3-8-3,2-8-2,1-8-1,3-6-3 or 1-6-1, more preferably 1-10-1,2-10-2,3-10-3 and 1-9-2.
In certain embodiments, this paper provides by short antisense compounds that gives one or more targeting PTP1B nucleic acid or the pharmaceutical composition that comprises this chemical compound and treats individual method.Also provide by the short antisense compounds that gives targeting PTP1B nucleic acid and treat the method for suffering from the experimenter of active diseases associated of PTP1B or disease.Include but not limited to high blood-glucose or hyperglycemia, prediabetes, diabetes, type ii diabetes, metabolic syndrome, obesity and insulin resistance with PTP1B diseases associated and disease.Therefore, this paper provides by giving the short antisense compounds of targeting PTP1B nucleic acid, treats the method for high blood-glucose or hyperglycemia, prediabetes, diabetes, type ii diabetes, metabolic syndrome, obesity and insulin resistance.
In certain embodiments, the invention provides in order to give the experimenter, reduce the blood-glucose among this experimenter or prevent or postpone the compositions and the method for the outbreak of blood glucose levels rising among this experimenter by the short antisense inhibitor that PTP1B is expressed.
In certain embodiments, the invention provides, improve the insulin sensitivity among this experimenter or prevent or postpone the compositions and the method for the outbreak of insulin resistance among this experimenter in order to give the experimenter by the short antisense inhibitor that PTP1B is expressed.
In certain embodiments, the invention provides in order to give the experimenter, treat the metabolic disorder among this experimenter or prevent or postpone the compositions and the method for the outbreak of metabolic disorder among this experimenter by short antisense compounds with targeting PTP1B nucleic acid.This metabolic disorder can be that any and PTP1B express relevant metabolic disorder, includes but not limited to diabetes and obesity.The method that reduces obesity (adiposity) also is provided.The wherein method of the obesity (obesity) of metabolic rate raising for the treatment of also is provided.
In certain embodiments, the experimenter suffers from type ii diabetes.In certain embodiments, the experimenter demonstrates high HbA1c level.In certain embodiments, the HbA1c level be at least about 6%, at least about 7%, at least about 8%, at least about 9%, at least about 10% or at least about 11%.In preferred embodiments, HbA1cLevel reduces to about 7% or be lower than about 7%.In certain embodiments, the experimenter demonstrates high Body Mass Index.In certain embodiments, high Body Mass Index is greater than 25kg/m2In certain embodiments, the experimenter demonstrates hyperglycemia or hypertension glucose level.In a specific embodiment, blood glucose levels is a fasting blood pressure glucose level.In certain embodiments, high fasting blood pressure glucose level is 130mg/dL.In certain embodiments, the experimenter demonstrates hyperglycemia or demonstrates the fasting blood glucose levels before the treatment beginning and is higher than about 130mg/dL, baseline HbA1cLevel at least about 7% or Body Mass Index greater than 25kg/m2Or their any combination.
In certain embodiments, provide the method that reduces one or more this levels by the short antisense compounds that gives targeting PTP1B nucleic acid.For example, provide by short antisense compounds and given the experimenter, reduced fasting glucose level, HbA among the experimenter targeting PTP1B1cThe method of level or Body Mass Index level or their any combination.The fasting glucose can be fasting blood-glucose, fasting serum glucose or fasting plasma glucose.In some embodiments, fasting plasma glucose levels reduces at least about 25mg/dL or at least about 10mg/dL.In certain embodiments, described experimenter can not reach normal glucose level under the therapeutic scheme situation of accepting glucose attenuating medicament such as insulin, sulfonylureas or metformin.
In certain embodiments, the invention provides the method that changes lipid level.Some this method is to give the experimenter by the short antisense compounds with targeting PTP1B nucleic acid, reduces cholesterol, LDL and/or VLDL level among this experimenter or their any combination.In certain embodiments, the HDL level among the experimenter is to give this experimenter by the short antisense compounds with targeting PTP1B nucleic acid to improve.In certain embodiments, the LDL among the experimenter: HDL ratio and/or T-CHOL: HDL ratio are to give this experimenter by the short antisense compounds with targeting PTP1B nucleic acid to reduce.In certain embodiments, the HDL among the experimenter: LDL ratio and/or total HDL: the cholesterol ratio is to give this experimenter by the short antisense compounds with targeting PTP1B nucleic acid to improve.In certain embodiments, lipodogramme among the experimenter (lipid profile) is to give this experimenter by the short antisense compounds with targeting PTP1B nucleic acid, with raising HDL, reduction LDL, reduction VLDL, triglyceride reducing, reduction apolipoprotein B level or hypercholesterolemia reducing level or their combination, thereby be improved.In this embodiment, the experimenter is an animal, comprises the people.
Combination treatment
In certain embodiments, the pharmaceutical composition that one or more is comprised the short antisense compounds of targeting PTP1B nucleic acid gives altogether with one or more other medicament.In certain embodiments, described one or more other medicament be designed to its disease for the treatment of or disease identical with described one or more pharmaceutical compositions of the present invention.In certain embodiments, described one or more other medicament be designed to its disease for the treatment of or disease different with described one or more pharmaceutical compositions of the present invention.In certain embodiments, described one or more other medicament is designed to treat the ill effect of one or more pharmaceutical compositions of the present invention.In certain embodiments, one or more pharmaceutical compositions of the present invention are given altogether with another medicament, to treat the ill effect of this another medicament.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is given simultaneously.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is given at different time.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is prepared together in single dosage form.In certain embodiments, with other separately preparation of medicament of one or more pharmaceutical compositions of the present invention and one or more.
In certain embodiments, the medicament that can give altogether with the pharmaceutical composition of the short antisense compounds that comprises targeting PTP1B nucleic acid comprises that glucose reduces medicament and therapy.In some embodiments, glucose reduction medicament is PPAR agonist (gamma agonist, binary (dual) agonist or general (pan) agonist), dipeptidyl peptidase (IV) inhibitor, GLP-1 analog, insulin or insulin analog, insulin secretagogue, SGLT2 inhibitor, human branched chain starch analog, biguanide, alpha-glucosidase inhibitor, meglitinide, thiazolidinedione or sulfonylureas.
In some embodiments, glucose reduction medicament is the GLP-1 analog.In some embodiments, the GLP-1 analog is Exendin-4 or Li Lalu peptide (liraglutide).
In other embodiments, glucose reduction medicament is a sulfonylureas.In some embodiments, sulfonylureas is acetohexamide, chlorpropamide, tolbutamide, tolazamide, glimepiride, glipizide, glibenclamide or gliclazide.
In some embodiments, glucose reduction medicament is a biguanide.In some embodiments, biguanide is a metformin, and in some embodiments, reducing appears in the blood pressure glucose level, and lactic acidosis is as occurring increasing with the viewed lactic acidosis in metformin treatment back separately.
In some embodiments, glucose reduction medicament is a meglitinide.In some embodiments, meglitinide is Nateglinide or repaglinide.
In some embodiments, glucose reduction medicament is a thiazolidinedione.In some embodiments, thiazolidinedione is pioglitazone, rosiglitazone or troglitazone.In some embodiments, blood glucose levels occur to reduce, but weight increase do not resemble independent rosiglitazone treat viewed height.
In some embodiments, glucose reduction medicament is an alpha-glucosidase inhibitor.In some embodiments, alpha-glucosidase inhibitor is acarbose or miglitol.
In a certain embodiment, it is ISIS 113715 that the glucose that gives altogether reduces medicament.
In a certain embodiment, it is that curative life style changes that glucose reduces therapy.
In some this embodiment, glucose is reduced medicament give before the pharmaceutical composition of the present invention giving.In some this embodiment, glucose is reduced medicament after giving pharmaceutical composition of the present invention, give.In some this embodiment, glucose is reduced medicament when giving pharmaceutical composition of the present invention, give.In some this embodiment, the dosage that the glucose that gives altogether reduces medicament is identical with the dosage that gives separately to be given when glucose reduces medicament.In some this embodiment, the dosage that the glucose that gives altogether reduces medicament is lower than the dosage that is given when giving glucose reduction medicament separately.In some this embodiment, the dosage that the glucose that gives altogether reduces medicament is higher than the dosage that is given when giving glucose reduction medicament separately.
In certain embodiments, the medicament that can give altogether with the pharmaceutical composition of the short antisense compounds that comprises targeting PTP1B nucleic acid comprises that lipid reduces medicament.This lipid reduces medicament to be discussed in other places of the application, here is to be related to PTP1B and to be comprised.This lipid reduces medicament can reduce to glucose as above that medicament is described to be given.
In certain embodiments, the medicament that can give altogether with the pharmaceutical composition of the short antisense compounds that comprises targeting PTP1B nucleic acid comprises the anti-obesity medicament.This anti-obesity medicament can be as above reduces to glucose that medicament is described to be given.
Also provide the method that gives the short antisense compounds of targeting PTP1B nucleic acid by injection, this method also is included in the injection site and gives topical steroids.
Medicine
This paper also provides the short antisense compounds of targeting PTP1B nucleic acid to be used for preparation in order to reduce blood glucose levels (comprising the fasting glucose level) and HbA1cThe purposes of the medicine of level, Body Mass Index level or their any combination.This medicine can give in load phase (loading period) and the phase of keeping.In some embodiments, this medicine gives by subcutaneous or intravenous.In other embodiments, described medicine be every day at least once, each week at least once or every month at least once.In a specific embodiment, the short antisense compounds that exists in this medicine is that particularly 20 or 20 dosage with the short antisense compounds of the sequence of coker base give to be lower than longer sequence.The experimenter that this medicine can be shown high blood-glucose or hyperglycemia, prediabetes, diabetes, type ii diabetes, metabolic syndrome, obesity and insulin resistance.
Other aspects and the advantage of short antisense compounds have introduction in this article.Disclosed herein, particularly for all aspects and the advantage of other targets, be applicable to the compositions of the short antisense compounds that comprises targeting PTP1B nucleic acid and their using method.
The short antisense compounds of some targeting PTP1B nucleic acid
In certain embodiments, lacking the antisense compounds targeting has
The sequence of searching number NM_002827.2 (being incorporated herein) with SEQ ID NO:11 or

The PTP1B nucleic acid of the nucleotide 14178000-1425600 of the sequence of searching number NT_011362.9 (being incorporated herein) with SEQ ID NO:12.In some this embodiment, short antisense compounds and the SEQ ID NO:11 of targeting SEQ ID NO:11 have at least 90% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:11 of targeting SEQ ID NO:11 have at least 95% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:11 of targeting SEQ ID NO:11 have 100% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:12 of targeting SEQ ID NO:12 have at least 90% complementarity.In some this embodiment, the short antisense compounds of targeting SEQID NO:12 and SEQ ID NO:12 have at least 95% complementarity.In some this embodiment, short antisense compounds and the SEQ IDNO:12 of targeting SEQ ID NO:12 have 100% complementarity.
In certain embodiments, the short antisense compounds of targeting SEQ ID NO:11 comprises the nucleotide sequence that is selected from the nucleotide sequence that provides in table 16 and 17.In certain embodiments, the short antisense compounds of targeting SEQ ID NO:12 comprises the nucleotide sequence that is selected from the nucleotide sequence that provides in table 18 and 19.
Each nucleotide sequence that table 16,17,18 and 19 provides in each is independent of any modification to sugar moieties, Dan Julian key or nuclear base.Thus, the short antisense compounds that comprises certain nucleotide sequence that provides in the table 16,17,18 and 19 can comprise one or more to connecting the modification of key or nuclear base between sugar moieties, nucleoside independently.Isis number (Isis NO.) described antisense compounds represented the nuclear base sequence with one or more to connecting key between sugar moieties, nucleoside or examining the combination of the modification of base.
Table 16 and 17 has been enumerated the example of the short antisense compounds of targeting SEQ ID NO:11.Table 16 has been enumerated the short antisense compounds that 100% complementarity is arranged with SEQ ID NO:11.Table 17 has been enumerated the short antisense compounds that has one or two mispairing with respect to SEQ ID NO:11.Table 18 has been enumerated the short antisense compounds that 100% complementarity is arranged with SEQ ID NO:12.Table 19 has been enumerated the short antisense compounds that has 1 or 2 mispairing with respect to SEQ ID NO:12.The file that is marked with " gapmer die body " is represented the pterion of each short antisense compounds-at interval-pterion die body.Spacer segment comprises 2 '-deoxyribonucleotide, and each nucleotide of each pterion section comprises the sugar through 2 '-modification.The concrete sugar through 2 '-modification is also represented in " gapmer die body " file.For example, " 2-10-2MOE " means the 2-10-2gapmer die body, and wherein the spacer segment both sides of 10 2 '-deoxyribonucleotides are connected to the pterion section of 2 nucleotide, and wherein the nucleotide of pterion section is 2 '-MOE nucleotide.Connecting key between nucleoside is thiophosphate.Short antisense compounds comprises the 5-methylcytidine that substitutes not modified cytosine, unless show " not modified cytosine " in the gapmer die body file, represented in this case cytosine is not modified cytosine.For example, " 5-mC is only in the interval " expression spacer segment has the 5-methylcytidine, and the pterion section has not modified cytosine.
Table 16: the short antisense compounds of targeting SEQ ID NO:11
| ISIS NO. | 5 ' target site | 3 ' target site | Sequence (5 '-3 ') | The Gapmer die body | SEQ ID NO |
| 147022 | 177 | 188 | TTGTCGATCTCC | 1-10-1MOE | 886 |
| 147023 | 178 | 189 | CTTGTCGATCTC | 1-10-1MOE | 859 |
| 147024 | 179 | 190 | CCTTGTCGATCT | 1-10-1MOE | 853 |
| 147019 | 195 | 206 | TCGATCTCCTCG | 1-10-1MOE | 877 |
| 147020 | 196 | 207 | GTCGATCTCCTC | 1-10-1MOE | 868 |
| 147021 | 197 | 208 | TGTCGATCTCCT | 1-10-1MOE | 882 |
| 147022 | 198 | 209 | TTGTCGATCTCC | 1-10-1MOE | 886 |
| 147023 | 199 | 210 | CTTGTCGATCTC | 1-10-1MOE | 859 |
| 147024 | 200 | 211 | CCTTGTCGATCT | 1-10-1MOE | 853 |
| 147025 | 201 | 212 | GCCTTGTCGATC | 1-10-1MOE | 865 |
| 147026 | 202 | 213 | AGCCTTGTCGAT | 1-10-1MOE | 835 |
| 147027 | 203 | 214 | CAGCCTTGTCGA | 1-10-1MOE | 843 |
| 147028 | 204 | 215 | CCAGCCTTGTCG | 1-10-1MOE | 846 |
| 147073 | 204 | 215 | CACTGATCCTGC | 1-10-1MOE | 842 |
| 147029 | 205 | 216 | CCCAGCCTTGTC | 1-10-1MOE | 848 |
| 147030 | 206 | 217 | TCCCAGCCTTGT | 1-10-1MOE | 874 |
| 147036 | 212 | 223 | CCCAGTTCCCAG | 1-10-1MOE | 849 |
| 147037 | 213 | 224 | GCCCAGTTCCCA | 1-10-1MOE | 863 |
| 147038 | 214 | 225 | CGCCCAGTTCCC | 1-10-1MOE | 855 |
| 147039 | 215 | 226 | CCGCCCAGTTCC | 1-10-1MOE | 850 |
| 147040 | 216 | 227 | GCCGCCCAGTTC | 1-10-1MOE | 864 |
| 147041 | 217 | 228 | AGCCGCCCAGTT | 1-10-1MOE | 834 |
| 147073 | 311 | 322 | CACTGATCCTGC | 1-10-1MOE | 842 |
| 147042 | 323 | 334 | GGTCAAAAGGGC | 1-10-1MOE | 866 |
| 147043 | 324 | 335 | TGGTCAAAAGGG | 1-10-1MOE | 881 |
| 147044 | 325 | 336 | GTGGTCAAAAGG | 1-10-1MOE | 869 |
| 147045 | 326 | 337 | TGTGGTCAAAAG | 1-10-1MOE | 883 |
| 147046 | 327 | 338 | CTGTGGTCAAAA | 1-10-1MOE | 858 |
| 147047 | 328 | 339 | ACTGTGGTCAAA | 1-10-1MOE | 833 |
| 147051 | 332 | 343 | TCCGACTGTGGT | 1-10-1MOE | 875 |
| 147052 | 333 | 344 | ATCCGACTGTGG | 1-10-1MOE | 837 |
| 147053 | 334 | 345 | AATCCGACTGTG | 1-10-1MOE | 829 |
| 147054 | 335 | 346 | TAATCCGACTGT | 1-10-1MOE | 871 |
| 147055 | 336 | 347 | TTAATCCGACTG | 1-10-1MOE | 884 |
| 147056 | 337 | 348 | TTTAATCCGACT | 1-10-1MOE | 887 |
| 147057 | 338 | 349 | ATTTAATCCGAC | 1-10-1MOE | 839 |
| 147058 | 339 | 350 | AATTTAATCCGA | 1-10-1MOE | 830 |
| 147059 | 340 | 351 | CAATTTAATCCG | 1-10-1MOE | 840 |
| 147060 | 341 | 352 | GCAATTTAATCC | 1-10-1MOE | 861 |
| 147061 | 342 | 353 | TGCAATTTAATC | 1-10-1MOE | 879 |
| 147045 | 679 | 690 | TGTGGTCAAAAG | 1-10-1MOE | 883 |
| 147046 | 680 | 691 | CTGTGGTCAAAA | 1-10-1MOE | 858 |
| 147045 | 787 | 798 | TGTGGTCAAAAG | 1-10-1MOE | 883 |
| 147046 | 788 | 799 | CTGTGGTCAAAA | 1-10-1MOE | 858 |
| 147066 | 816 | 827 | CCTGCACTGACG | 1-10-1MOE | 851 |
| 404131 | 992 | 1005 | ACCTTCGATCACAG | 2-10-2MOE | 831 |
| 147062 | 1024 | 1035 | CACTGACGAGTC | 1-10-1MOE | 841 |
| 147063 | 1025 | 1036 | GCACTGACGAGT | 1-10-1MOE | 862 |
| 147064 | 1026 | 1037 | TGCACTGACGAG | 1-10-1MOE | 880 |
| 147065 | 1027 | 1038 | CTGCACTGACGA | 1-10-1MOE | 857 |
| 147066 | 1028 | 1039 | CCTGCACTGACG | 1-10-1MOE | 851 |
| 147067 | 1029 | 1040 | TCCTGCACTGAC | 1-10-1MOE | 876 |
| 147068 | 1030 | 1041 | ATCCTGCACTGA | 1-10-1MOE | 838 |
| 147069 | 1031 | 1042 | GATCCTGCACTG | 1-10-1MOE | 860 |
| 147070 | 1032 | 1043 | TGATCCTGCACT | 1-10-1MOE | 878 |
| 147071 | 1033 | 1044 | CTGATCCTGCAC | 1-10-1MOE | 856 |
| 147072 | 1034 | 1045 | ACTGATCCTGCA | 1-10-1MOE | 832 |
| 147073 | 1035 | 1046 | CACTGATCCTGC | 1-10-1MOE | 842 |
| 147067 | 1199 | 1210 | TCCTGCACTGAC | 1-10-1MOE | 876 |
| 147040 | 1288 | 1299 | GCCGCCCAGTTC | 1-10-1MOE | 864 |
| 147040 | 1396 | 1407 | GCCGCCCAGTTC | 1-10-1MOE | 864 |
| 147022 | 1868 | 1879 | TTGTCGATCTCC | 1-10-1MOE | 886 |
| 147023 | 1869 | 1880 | CTTGTCGATCTC | 1-10-1MOE | 859 |
| 147024 | 1870 | 1881 | CCTTGTCGATCT | 1-10-1MOE | 853 |
| 147019 | 1886 | 1897 | TCGATCTCCTCG | 1-10-1MOE | 877 |
| 147020 | 1887 | 1898 | GTCGATCTCCTC | 1-10-1MOE | 868 |
| 147021 | 1888 | 1899 | TGTCGATCTCCT | 1-10-1MOE | 882 |
| 147022 | 1889 | 1900 | TTGTCGATCTCC | 1-10-1MOE | 886 |
| 147023 | 1890 | 1901 | CTTGTCGATCTC | 1-10-1MOE | 859 |
| 147025 | 1892 | 1903 | GCCTTGTCGATC | 1-10-1MOE | 865 |
| 147027 | 1894 | 1905 | CAGCCTTGTCGA | 1-10-1MOE | 843 |
| 147028 | 1895 | 1906 | CCAGCCTTGTCG | 1-10-1MOE | 846 |
| 147030 | 1897 | 1908 | TCCCAGCCTTGT | 1-10-1MOE | 874 |
| 147037 | 1904 | 1915 | GCCCAGTTCCCA | 1-10-1MOE | 863 |
| 147038 | 1905 | 1916 | CGCCCAGTTCCC | 1-10-1MOE | 855 |
| 147040 | 1907 | 1918 | GCCGCCCAGTTC | 1-10-1MOE | 864 |
| 147041 | 1908 | 1919 | AGCCGCCCAGTT | 1-10-1MOE | 834 |
| 147022 | 1976 | 1987 | TTGTCGATCTCC | 1-10-1MOE | 886 |
| 147023 | 1977 | 1988 | CTTGTCGATCTC | 1-10-1MOE | 859 |
| 147024 | 1978 | 1989 | CCTTGTCGATCT | 1-10-1MOE | 853 |
| 147020 | 1995 | 2006 | GTCGATCTCCTC | 1-10-1MOE | 868 |
| 147021 | 1996 | 2007 | TGTCGATCTCCT | 1-10-1MOE | 882 |
| 147022 | 1997 | 2008 | TTGTCGATCTCC | 1-10-1MOE | 886 |
| 147023 | 1998 | 2009 | CTTGTCGATCTC | 1-10-1MOE | 859 |
| 147024 | 1999 | 2010 | CCTTGTCGATCT | 1-10-1MOE | 853 |
| 147025 | 2000 | 2011 | GCCTTGTCGATC | 1-10-1MOE | 865 |
| 147026 | 2001 | 2012 | AGCCTTGTCGAT | 1-10-1MOE | 835 |
| 147027 | 2002 | 2013 | CAGCCTTGTCGA | 1-10-1MOE | 843 |
| 147028 | 2003 | 2014 | CCAGCCTTGTCG | 1-10-1MOE | 846 |
| 147029 | 2004 | 2015 | CCCAGCCTTGTC | 1-10-1MOE | 848 |
| 147030 | 2005 | 2016 | TCCCAGCCTTGT | 1-10-1MOE | 874 |
| 147036 | 2011 | 2022 | CCCAGTTCCCAG | 1-10-1MOE | 849 |
| 147037 | 2012 | 2023 | GCCCAGTTCCCA | 1-10-1MOE | 863 |
| 147038 | 2013 | 2024 | CGCCCAGTTCCC | 1-10-1MOE | 855 |
| 147039 | 2014 | 2025 | CCGCCCAGTTCC | 1-10-1MOE | 850 |
| 147040 | 2015 | 2026 | GCCGCCCAGTTC | 1-10-1MOE | 864 |
| 147041 | 2016 | 2027 | AGCCGCCCAGTT | 1-10-1MOE | 834 |
| 404199 | 2366 | 2379 | GGTCATGCACAGGC | 2-10-2MOE | 867 |
| 404134 | 2369 | 2382 | TCAGGTCATGCACA | 2-10-2MOE | 873 |
| 404132 | 2548 | 2561 | CCTTGGAATGTCTG | 2-10-2MOE | 852 |
| 147020 | 2613 | 2624 | GTCGATCTCCTC | 1-10-1MOE | 868 |
| 147020 | 2721 | 2732 | GTCGATCTCCTC | 1-10-1MOE | 868 |
| 404133 | 3289 | 3302 | TATTCCATGGCCAT | 2-10-2MOE | 872 |
| 147032 | 6220 | 6231 | GTTCCCAGCCTT | 1-10-1MOE | 870 |
| 147033 | 6221 | 6232 | AGTTCCCAGCCT | 1-10-1MOE | 836 |
| 147034 | 6222 | 6233 | CAGTTCCCAGCC | 1-10-1MOE | 844 |
| 147044 | 6288 | 6299 | GTGGTCAAAAGG | 1-10-1MOE | 869 |
| 147045 | 6289 | 6300 | TGTGGTCAAAAG | 1-10-1MOE | 883 |
| 147032 | 6329 | 6340 | GTTCCCAGCCTT | 1-10-1MOE | 870 |
| 147033 | 6330 | 6341 | AGTTCCCAGCCT | 1-10-1MOE | 836 |
| 147034 | 6331 | 6342 | CAGTTCCCAGCC | 1-10-1MOE | 844 |
| 147044 | 6397 | 6408 | GTGGTCAAAAGG | 1-10-1MOE | 869 |
| 147045 | 6398 | 6409 | TGTGGTCAAAAG | 1-10-1MOE | 883 |
| 147058 | 7057 | 7068 | AATTTAATCCGA | 1-10-1MOE | 830 |
| 147059 | 7058 | 7069 | CAATTTAATCCG | 1-10-1MOE | 840 |
| 147060 | 7059 | 7070 | GCAATTTAATCC | 1-10-1MOE | 861 |
| 147058 | 7166 | 7177 | AATTTAATCCGA | 1-10-1MOE | 830 |
| 147059 | 7167 | 7178 | CAATTTAATCCG | 1-10-1MOE | 840 |
| 147041 | 8084 | 8095 | AGCCGCCCAGTT | 1-10-1MOE | 834 |
| 147041 | 8192 | 8203 | AGCCGCCCAGTT | 1-10-1MOE | 834 |
| 147027 | 8630 | 8641 | CAGCCTTGTCGA | 1-10-1MOE | 843 |
| 147028 | 8631 | 8642 | CCAGCCTTGTCG | 1-10-1MOE | 846 |
| 147027 | 8738 | 8749 | CAGCCTTGTCGA | 1-10-1MOE | 843 |
| 147028 | 8739 | 8750 | CCAGCCTTGTCG | 1-10-1MOE | 846 |
| 147043 | 10957 | 10968 | TGGTCAAAAGGG | 1-10-1MOE | 881 |
| 147044 | 10958 | 10969 | GTGGTCAAAAGG | 1-10-1MOE | 869 |
| 147043 | 11065 | 11076 | TGGTCAAAAGGG | 1-10-1MOE | 881 |
| 147044 | 11066 | 11077 | GTGGTCAAAAGG | 1-10-1MOE | 869 |
| 147071 | 11605 | 11616 | CTGA TCCTGCAC | 1-10-1MOE | 856 |
| 147070 | 11611 | 11622 | TGATCCTGCACT | 1-10-1MOE | 878 |
| 147071 | 11612 | 11623 | CTGATCCTGCAC | 1-10-1MOE | 856 |
| 147072 | 12294 | 12305 | ACTGATCCTGCA | 1-10-1MOE | 832 |
| 147072 | 12299 | 12310 | ACTGATCCTGCA | 1-10-1MOE | 832 |
| 147030 | 12805 | 12816 | TCCCAGCCTTGT | 1-10-1MOE | 874 |
| 147031 | 12806 | 12817 | TTCCCAGCCTTG | 1-10-1MOE | 885 |
| 147053 | 12939 | 12950 | AATCCGACTGTG | 1-10-1MOE | 829 |
| 147030 | 12986 | 12997 | TCCCAGCCTTGT | 1-10-1MOE | 874 |
| 147031 | 12987 | 12998 | TTCCCAGCCTTG | 1-10-1MOE | 885 |
| 147053 | 13120 | 13131 | AATCCGACTGTG | 1-10-1MOE | 829 |
| 147051 | 13162 | 13173 | TCCGACTGTGGT | 1-10-1MOE | 875 |
| 147061 | 13316 | 13327 | TGCAATTTAATC | 1-10-1MOE | 879 |
| 147047 | 13339 | 13350 | ACTGTGGTCAAA | 1-10-1MOE | 833 |
| 147029 | 14058 | 14069 | CCCAGCCTTGTC | 1-10-1MOE | 848 |
| 147029 | 14239 | 14250 | CCCAGCCTTGTC | 1-10-1MOE | 848 |
| 147067 | 15560 | 15571 | TCCTGCACTGAC | 1-10-1MOE | 876 |
| 147068 | 15561 | 15572 | ATCCTGCACTGA | 1-10-1MOE | 838 |
| 147067 | 15742 | 15753 | TCCTGCACTGAC | 1-10-1MOE | 876 |
| 147069 | 15744 | 15755 | GATCCTGCACTG | 1-10-1MOE | 860 |
| 147042 | 16561 | 16572 | GGTCAAAAGGGC | 1-10-1MOE | 866 |
| 147042 | 16727 | 16738 | GGTCAAAAGGGC | 1-10-1MOE | 866 |
| 147030 | 17619 | 17630 | TCCCAGCCTTGT | 1-10-1MOE | 874 |
| 147064 | 17762 | 17773 | TGCACTGACGAG | 1-10-1MOE | 880 |
| 147030 | 17787 | 17798 | TCCCAGCCTTGT | 1-10-1MOE | 874 |
| 147064 | 17930 | 17941 | TGCACTGACGAG | 1-10-1MOE | 880 |
| 147042 | 19201 | 19212 | GGTCAAAAGGGC | 1-10-1MOE | 866 |
| 147042 | 19369 | 19380 | GGTCAAAAGGGC | 1-10-1MOE | 866 |
| 147027 | 21190 | 21201 | CAGCCTTGTCGA | 1-10-1MOE | 843 |
| 147028 | 21191 | 21202 | CCAGCCTTGTCG | 1-10-1MOE | 846 |
| 147027 | 21358 | 21369 | CAGCCTTGTCGA | 1-10-1MOE | 843 |
| 147028 | 21359 | 21370 | CCAGCCTTGTCG | 1-10-1MOE | 846 |
| 147070 | 22021 | 22032 | TGATCCTGCACT | 1-10-1MOE | 878 |
| 147070 | 22189 | 22200 | TGATCCTGCACT | 1-10-1MOE | 878 |
| 147047 | 22606 | 22617 | ACTGTGGTCAAA | 1-10-1MOE | 833 |
| 147043 | 24318 | 24329 | TGGTCAAAAGGG | 1-10-1MOE | 881 |
| 147044 | 24319 | 24330 | GTGGTCAAAAGG | 1-10-1MOE | 869 |
| 147045 | 24320 | 24331 | TGTGGTCAAAAG | 1-10-1MOE | 883 |
| 147046 | 24321 | 24332 | CTGTGGTCAAAA | 1-10-1MOE | 858 |
| 147043 | 24486 | 24497 | TGGTCAAAAGGG | 1-10-1MOE | 881 |
| 147044 | 24487 | 24498 | GTGGTCAAAAGG | 1-10-1MOE | 869 |
| 147046 | 24489 | 24500 | CTGTGGTCAAAA | 1-10-1MOE | 858 |
| 147047 | 24490 | 24501 | ACTGTGGTCAAA | 1-10-1MOE | 833 |
| 147040 | 25065 | 25076 | GCCGCCCAGTTC | 1-10-1MOE | 864 |
| 147041 | 25066 | 25077 | AGCCGCCCAGTT | 1-10-1MOE | 834 |
| 147046 | 25160 | 25171 | CTGTGGTCAAAA | 1-10-1MOE | 858 |
| 147039 | 25232 | 25243 | CCGCCCAGTTCC | 1-10-1MOE | 850 |
| 147040 | 25233 | 25244 | GCCGCCCAGTTC | 1-10-1MOE | 864 |
| 147041 | 25234 | 25245 | AGCCGCCCAGTT | 1-10-1MOE | 834 |
| 147046 | 25328 | 25339 | CTGTGGTCAAAA | 1-10-1MOE | 858 |
| 147057 | 25508 | 25519 | ATTTAATCCGAC | 1-10-1MOE | 839 |
| 147061 | 25512 | 25523 | TGCAATTTAATC | 1-10-1MOE | 879 |
| 147057 | 25676 | 25687 | ATTTAATCCGAC | 1-10-1MOE | 839 |
| 147069 | 28878 | 28889 | GATCCTGCACTG | 1-10-1MOE | 860 |
| 147070 | 28879 | 28890 | TGATCCTGCACT | 1-10-1MOE | 878 |
| 147053 | 30133 | 30144 | AATCCGACTGTG | 1-10-1MOE | 829 |
| 147053 | 30278 | 30289 | AATCCGACTGTG | 1-10-1MOE | 829 |
| 147054 | 30864 | 30875 | TAATCCGACTGT | 1-10-1MOE | 871 |
| 147043 | 30985 | 30996 | TGGTCAAAAGGG | 1-10-1MOE | 881 |
| 147054 | 31011 | 31022 | TAATCCGACTGT | 1-10-1MOE | 871 |
| 147043 | 31133 | 31144 | TGGTCAAAAGGG | 1-10-1MOE | 881 |
| 147036 | 32233 | 32244 | CCCAGTTCCCAG | 1-10-1MOE | 849 |
| 147072 | 32372 | 32383 | ACTGATCCTGCA | 1-10-1MOE | 832 |
| 147072 | 32520 | 32531 | ACTGATCCTGCA | 1-10-1MOE | 832 |
| 147069 | 33056 | 33067 | GATCCTGCACTG | 1-10-1MOE | 860 |
| 147070 | 33057 | 33068 | TGATCCTGCACT | 1-10-1MOE | 878 |
| 147071 | 33058 | 33069 | CTGATCCTGCAC | 1-10-1MOE | 856 |
| 147051 | 33126 | 33137 | TCCGACTGTGGT | 1-10-1MOE | 875 |
| 147070 | 33205 | 33216 | TGATCCTGCACT | 1-10-1MOE | 878 |
| 147071 | 33206 | 33217 | CTGATCCTGCAC | 1-10-1MOE | 856 |
| 147051 | 33274 | 33285 | TCCGACTGTGGT | 1-10-1MOE | 875 |
| 147046 | 33318 | 33329 | CTGTGGTCAAAA | 1-10-1MOE | 858 |
| 147049 | 33321 | 33332 | CGACTGTGGTCA | 1-10-1MOE | 854 |
| 147051 | 33323 | 33334 | TCCGACTGTGGT | 1-10-1MOE | 875 |
| 147046 | 33466 | 33477 | CTGTGGTCAAAA | 1-10-1MOE | 858 |
| 147047 | 33467 | 33478 | ACTGTGGTCAAA | 1-10-1MOE | 833 |
| 147051 | 33471 | 33482 | TCCGACTGTGGT | 1-10-1MOE | 875 |
| 147046 | 33640 | 33651 | CTGTGGTCAAAA | 1-10-1MOE | 858 |
| 147051 | 33645 | 33656 | TCCGACTGTGGT | 1-10-1MOE | 875 |
| 147046 | 33788 | 33799 | CTGTGGTCAAAA | 1-10-1MOE | 858 |
| 147051 | 33793 | 33804 | TCCGACTGTGGT | 1-10-1MOE | 875 |
| 147059 | 35437 | 35448 | CAATTTAATCCG | 1-10-1MOE | 840 |
| 147060 | 35438 | 35449 | GCAATTTAATCC | 1-10-1MOE | 861 |
| 147060 | 35586 | 35597 | GCAATTTAATCC | 1-10-1MOE | 861 |
| 147021 | 36093 | 36104 | TGTCGATCTCCT | 1-10-1MOE | 882 |
| 147061 | 36250 | 36261 | TGCAATTTAATC | 1-10-1MOE | 879 |
| 147061 | 36398 | 36409 | TGCAATTTAATC | 1-10-1MOE | 879 |
| 147073 | 37485 | 37496 | CACTGATCCTGC | 1-10-1MOE | 842 |
| 147073 | 37633 | 37644 | CACTGATCCTGC | 1-10-1MOE | 842 |
| 147043 | 40214 | 40225 | TGGTCAAAAGGG | 1-10-1MOE | 881 |
| 147061 | 40353 | 40364 | TGCAATTTAATC | 1-10-1MOE | 879 |
| 147043 | 40362 | 40373 | TGGTCAAAAGGG | 1-10-1MOE | 881 |
| 147061 | 40501 | 40512 | TGCAATTTAATC | 1-10-1MOE | 879 |
| 147031 | 42527 | 42538 | TTCCCAGCCTTG | 1-10-1MOE | 885 |
| 147032 | 42528 | 42539 | GTTCCCAGCCTT | 1-10-1MOE | 870 |
| 147034 | 42530 | 42541 | CAGTTCCCAGCC | 1-10-1MOE | 844 |
| 147031 | 42675 | 42686 | TTCCCAGCCTTG | 1-10-1MOE | 885 |
| 147032 | 42676 | 42687 | GTTCCCA GCCTT | 1-10-1MOE | 870 |
| 147033 | 42677 | 42688 | AGTTCCCAGCCT | 1-10-1MOE | 836 |
| 147034 | 42678 | 42689 | CAGTTCCCAGCC | 1-10-1MOE | 844 |
| 147074 | 43848 | 43859 | CCACTGATCCTG | 1-10-1MOE | 845 |
| 147074 | 43996 | 44007 | CCACTGATCCTG | 1-10-1MOE | 845 |
| 147051 | 45402 | 45413 | TCCGACTGTGGT | 1-10-1MOE | 875 |
| 147051 | 45550 | 45561 | TCCGACTGTGGT | 1-10-1MOE | 875 |
| 147074 | 46125 | 46136 | CCACTGATCCTG | 1-10-1MOE | 845 |
| 147057 | 46313 | 46324 | ATTTAATCCGAC | 1-10-1MOE | 839 |
| 147058 | 46314 | 46325 | AATTTAATCCGA | 1-10-1MOE | 830 |
| 147059 | 46315 | 46326 | CAATTTAATCCG | 1-10-1MOE | 840 |
| 147061 | 46317 | 46328 | TGCAATTTAATC | 1-10-1MOE | 879 |
| 147057 | 46461 | 46472 | ATTTAATCCGAC | 1-10-1MOE | 839 |
| 147059 | 46463 | 46474 | CAATTTAATCCG | 1-10-1MOE | 840 |
| 147061 | 46465 | 46476 | TGCAATTTAATC | 1-10-1MOE | 879 |
| 147058 | 47413 | 47424 | AATTTAATCCGA | 1-10-1MOE | 830 |
| 147073 | 48221 | 48232 | CACTGATCCTGC | 1-10-1MOE | 842 |
| 147073 | 48369 | 48380 | CACTGATCCTGC | 1-10-1MOE | 842 |
| 147074 | 48370 | 48381 | CCACTGA TCCTG | 1-10-1MOE | 845 |
| 147027 | 48566 | 48577 | CAGCCTTGTCGA | 1-10-1MOE | 843 |
| 147027 | 48714 | 48725 | CAGCCTTGTCGA | 1-10-1MOE | 843 |
| 147028 | 48715 | 48726 | CCAGCCTTGTCG | 1-10-1MOE | 846 |
| 147067 | 49050 | 49061 | TCCTGCACTGAC | 1-10-1MOE | 876 |
| 147068 | 49051 | 49062 | ATCCTGCACTGA | 1-10-1MOE | 838 |
| 147067 | 49198 | 49209 | TCCTGCACTGAC | 1-10-1MOE | 876 |
| 147073 | 49524 | 49535 | CACTGATCCTGC | 1-10-1MOE | 842 |
| 147073 | 49672 | 49683 | CACTGATCCTGC | 1-10-1MOE | 842 |
| 147074 | 49673 | 49684 | CCACTGATCCTG | 1-10-1MOE | 845 |
| 147036 | 50421 | 50432 | CCCAGTTCCCAG | 1-10-1MOE | 849 |
| 147036 | 52292 | 52303 | CCCAGTTCCCAG | 1-10-1MOE | 849 |
| 147037 | 52293 | 52304 | GCCCAGTTCCCA | 1-10-1MOE | 863 |
| 147036 | 52438 | 52449 | CCCAGTTCCCAG | 1-10-1MOE | 849 |
| 147037 | 52439 | 52450 | GCCCAGTTCCCA | 1-10-1MOE | 863 |
| 147034 | 53148 | 53159 | CAGTTCCCAGCC | 1-10-1MOE | 844 |
| 147034 | 53294 | 53305 | CAGTTCCCAGCC | 1-10-1MOE | 844 |
| 147042 | 53445 | 53456 | GGTCAAAAGGGC | 1-10-1MOE | 866 |
| 147043 | 53446 | 53457 | TGGTCAAAAGGG | 1-10-1MOE | 881 |
| 147044 | 53447 | 53458 | GTGGTCAAAAGG | 1-10-1MOE | 869 |
| 147042 | 53591 | 53602 | GGTCAAAAGGGC | 1-10-1MOE | 866 |
| 147030 | 53592 | 53603 | TCCCAGCCTTGT | 1-10-1MOE | 874 |
| 147043 | 53592 | 53603 | TGGTCAAAAGGG | 1-10-1MOE | 881 |
| 147031 | 53593 | 53604 | TTCCCAGCCTTG | 1-10-1MOE | 885 |
| 147044 | 53593 | 53604 | GTGGTCAAAAGG | 1-10-1MOE | 869 |
| 147030 | 53738 | 53749 | TCCCAGCCTTGT | 1-10-1MOE | 874 |
| 147031 | 53739 | 53750 | TTCCCAGCCTTG | 1-10-1MOE | 885 |
| 147040 | 53783 | 53794 | GCCGCCCAGTTC | 1-10-1MOE | 864 |
| 147041 | 53784 | 53795 | AGCCGCCCAGTT | 1-10-1MOE | 834 |
| 147041 | 53930 | 53941 | AGCCGCCCAGTT | 1-10-1MOE | 834 |
| 147042 | 55008 | 55019 | GGTCAAAAGGGC | 1-10-1MOE | 866 |
| 147043 | 55009 | 55020 | TGGTCAAAAGGG | 1-10-1MOE | 881 |
| 147042 | 55154 | 55165 | GGTCAAAAGGGC | 1-10-1MOE | 866 |
| 147043 | 55155 | 55166 | TGGTCAAAAGGG | 1-10-1MOE | 881 |
| 147058 | 55281 | 55292 | AATTTAATCCGA | 1-10-1MOE | 830 |
| 147058 | 55427 | 55438 | AATTTAATCCGA | 1-10-1MOE | 830 |
| 147019 | 55682 | 55693 | TCGATCTCCTCG | 1-10-1MOE | 877 |
| 147021 | 55684 | 55695 | TGTCGATCTCCT | 1-10-1MOE | 882 |
| 147021 | 55830 | 55841 | TGTCGATCTCCT | 1-10-1MOE | 882 |
| 147054 | 56275 | 56286 | TAATCCGACTGT | 1-10-1MOE | 871 |
| 147055 | 56276 | 56287 | TTAATCCGACTG | 1-10-1MOE | 884 |
| 147056 | 56277 | 56288 | TTTAATCCGACT | 1-10-1MOE | 887 |
| 147058 | 56279 | 56290 | AATTTAATCCGA | 1-10-1MOE | 830 |
| 147059 | 56280 | 56291 | CAATTTAATCCG | 1-10-1MOE | 840 |
| 147060 | 56281 | 56292 | GCAATTTAATCC | 1-10-1MOE | 861 |
| 147061 | 56282 | 56293 | TGCAATTTAATC | 1-10-1MOE | 879 |
| 147051 | 56418 | 56429 | TCCGACTGTGGT | 1-10-1MOE | 875 |
| 147053 | 56420 | 56431 | AATCCGACTGTG | 1-10-1MOE | 829 |
| 147054 | 56421 | 56432 | TAATCCGACTGT | 1-10-1MOE | 871 |
| 147055 | 56422 | 56433 | TTAATCCGACTG | 1-10-1MOE | 884 |
| 147056 | 56423 | 56434 | TTTAATCCGACT | 1-10-1MOE | 887 |
| 147057 | 56424 | 56435 | ATTTAATCCGAC | 1-10-1MOE | 839 |
| 147058 | 56425 | 56436 | AATTTAATCCGA | 1-10-1MOE | 830 |
| 147061 | 56428 | 56439 | TGCAATTTAATC | 1-10-1MOE | 879 |
| 147045 | 57118 | 57129 | TGTGGTCAAAAG | 1-10-1MOE | 883 |
| 147045 | 57264 | 57275 | TGTGGTCAAAAG | 1-10-1MOE | 883 |
| 147046 | 57265 | 57276 | CTGTGGTCAAAA | 1-10-1MOE | 858 |
| 147071 | 58028 | 58039 | CTGATCCTGCAC | 1-10-1MOE | 856 |
| 147071 | 58174 | 58185 | CTGATCCTGCAC | 1-10-1MOE | 856 |
| 147043 | 61111 | 61122 | TGGTCAAAAGGG | 1-10-1MOE | 881 |
| 147071 | 61130 | 61141 | CTGATCCTGCAC | 1-10-1MOE | 856 |
| 147020 | 61226 | 61237 | GTCGATCTCCTC | 1-10-1MOE | 868 |
| 147043 | 61257 | 61268 | TGGTCAAAAGGG | 1-10-1MOE | 881 |
| 147071 | 61276 | 61287 | CTGATCCTGCAC | 1-10-1MOE | 856 |
| 147035 | 61277 | 61288 | CCAGTTCCCAGC | 1-10-1MOE | 847 |
| 147036 | 61278 | 61289 | CCCAGTTCCCAG | 1-10-1MOE | 849 |
| 147037 | 61279 | 61290 | GCCCAGTTCCCA | 1-10-1MOE | 863 |
| 147038 | 61280 | 61291 | CGCCCAGTTCCC | 1-10-1MOE | 855 |
| 147039 | 61281 | 61292 | CCGCCCAGTTCC | 1-10-1MOE | 850 |
| 147040 | 61282 | 61293 | GCCGCCCAGTTC | 1-10-1MOE | 864 |
| 147071 | 61309 | 61320 | CTGATCCTGCAC | 1-10-1MOE | 856 |
| 147020 | 61372 | 61383 | GTCGATCTCCTC | 1-10-1MOE | 868 |
| 147034 | 61422 | 61433 | CAGTTCCCAGCC | 1-10-1MOE | 844 |
| 147035 | 61423 | 61434 | CCAGTTCCCAGC | 1-10-1MOE | 847 |
| 147036 | 61424 | 61435 | CCCAGTTCCCAG | 1-10-1MOE | 849 |
| 147037 | 61425 | 61436 | GCCCAGTTCCCA | 1-10-1MOE | 863 |
| 147038 | 61426 | 61437 | CGCCCAGTTCCC | 1-10-1MOE | 855 |
| 147040 | 61428 | 61439 | GCCGCCCAGTTC | 1-10-1MOE | 864 |
| 147071 | 61455 | 61466 | CTGATCCTGCAC | 1-10-1MOE | 856 |
| 147073 | 62003 | 62014 | CACTGATCCTGC | 1-10-1MOE | 842 |
| 147073 | 62149 | 62160 | CACTGATCCTGC | 1-10-1MOE | 842 |
| 147066 | 63065 | 63076 | CCTGCACTGACG | 1-10-1MOE | 851 |
| 147068 | 63067 | 63078 | ATCCTGCACTGA | 1-10-1MOE | 838 |
| 147069 | 63146 | 63157 | GATCCTGCACTG | 1-10-1MOE | 860 |
| 147062 | 63207 | 63218 | CACTGACGAGTC | 1-10-1MOE | 841 |
| 147066 | 63211 | 63222 | CCTGCACTGACG | 1-10-1MOE | 851 |
| 147057 | 64054 | 64065 | ATTTAATCCGAC | 1-10-1MOE | 839 |
| 147036 | 64538 | 64549 | CCCAGTTCCCAG | 1-10-1MOE | 849 |
| 147037 | 64539 | 64550 | GCCCAGTTCCCA | 1-10-1MOE | 863 |
| 147037 | 64685 | 64696 | GCCCAGTTCCCA | 1-10-1MOE | 863 |
| 147066 | 64864 | 64875 | CCTGCACTGACG | 1-10-1MOE | 851 |
| 147067 | 64865 | 64876 | TCCTGCACTGAC | 1-10-1MOE | 876 |
| 147066 | 65010 | 65021 | CCTGCACTGACG | 1-10-1MOE | 851 |
| 147067 | 65011 | 65022 | TCCTGCACTGAC | 1-10-1MOE | 876 |
| 147045 | 65017 | 65028 | TGTGGTCAAAAG | 1-10-1MOE | 883 |
| 147045 | 65163 | 65174 | TGTGGTCAAAAG | 1-10-1MOE | 883 |
| 147046 | 65164 | 65175 | CTGTGGTCAAAA | 1-10-1MOE | 858 |
| 147068 | 65408 | 65419 | ATCCTGCACTGA | 1-10-1MOE | 838 |
| 147071 | 65411 | 65422 | CTGATCCTGCAC | 1-10-1MOE | 856 |
| 147069 | 65549 | 65560 | GATCCTGCACTG | 1-10-1MOE | 860 |
| 147068 | 65554 | 65565 | ATCCTGCACTGA | 1-10-1MOE | 838 |
| 147071 | 65557 | 65568 | CTGATCCTGCAC | 1-10-1MOE | 856 |
| 147029 | 67741 | 67752 | CCCAGCCTTGTC | 1-10-1MOE | 848 |
| 147030 | 67742 | 67753 | TCCCAGCCTTGT | 1-10-1MOE | 874 |
| 147031 | 67743 | 67754 | TTCCCAGCCTTG | 1-10-1MOE | 885 |
| 147028 | 67886 | 67897 | CCAGCCTTGTCG | 1-10-1MOE | 846 |
| 147029 | 67887 | 67898 | CCCAGCCTTGTC | 1-10-1MOE | 848 |
| 147030 | 67888 | 67899 | TCCCAGCCTTGT | 1-10-1MOE | 874 |
| 147031 | 67889 | 67900 | TTCCCAGCCTTG | 1-10-1MOE | 885 |
| 147043 | 68867 | 68878 | TGGTCAAAAGGG | 1-10-1MOE | 881 |
| 147044 | 68868 | 68879 | GTGGTCAAAAGG | 1-10-1MOE | 869 |
| 147045 | 68869 | 68880 | TGTGGTCAAAAG | 1-10-1MOE | 883 |
| 147043 | 69013 | 69024 | TGGTCAAAAGGG | 1-10-1MOE | 881 |
| 147044 | 69014 | 69025 | GTGGTCAAAAGG | 1-10-1MOE | 869 |
| 147045 | 69015 | 69026 | TGTGGTCAAAAG | 1-10-1MOE | 883 |
| 147046 | 69016 | 69027 | CTGTGGTCAAAA | 1-10-1MOE | 858 |
| 147071 | 69519 | 69530 | CTGATCCTGCAC | 1-10-1MOE | 856 |
| 147072 | 69520 | 69531 | ACTGATCCTGCA | 1-10-1MOE | 832 |
| 147073 | 69521 | 69532 | CACTGATCCTGC | 1-10-1MOE | 842 |
| 147071 | 69665 | 69676 | CTGATCCTGCAC | 1-10-1MOE | 856 |
| 147072 | 69666 | 69677 | ACTGATCCTGCA | 1-10-1MOE | 832 |
| 147073 | 69667 | 69678 | CACTGATCCTGC | 1-10-1MOE | 842 |
| 147074 | 69668 | 69679 | CCACTGATCCTG | 1-10-1MOE | 845 |
| 147066 | 69869 | 69880 | CCTGCACTGACG | 1-10-1MOE | 851 |
| 147066 | 70015 | 70026 | CCTGCACTGACG | 1-10-1MOE | 851 |
| 147023 | 70465 | 70476 | CTTGTCGATCTC | 1-10-1MOE | 859 |
| 147023 | 70611 | 70622 | CTTGTCGATCTC | 1-10-1MOE | 859 |
| 147062 | 70615 | 70626 | CACTGACGAGTC | 1-10-1MOE | 841 |
| 147063 | 70616 | 70627 | GCACTGACGAGT | 1-10-1MOE | 862 |
| 147064 | 70617 | 70628 | TGCACTGACGAG | 1-10-1MOE | 880 |
| 147065 | 70618 | 70629 | CTGCACTGACGA | 1-10-1MOE | 857 |
| 147066 | 70619 | 70630 | CCTGCACTGACG | 1-10-1MOE | 851 |
| 147063 | 70762 | 70773 | GCACTGACGAGT | 1-10-1MOE | 862 |
| 147064 | 70763 | 70774 | TGCACTGACGAG | 1-10-1MOE | 880 |
| 147065 | 70764 | 70775 | CTGCACTGACGA | 1-10-1MOE | 857 |
| 147066 | 70765 | 70776 | CCTGCACTGACG | 1-10-1MOE | 851 |
| 147072 | 70998 | 71009 | ACTGATCCTGCA | 1-10-1MOE | 832 |
| 147073 | 70999 | 71010 | CACTGATCCTGC | 1-10-1MOE | 842 |
| 147072 | 71144 | 71155 | ACTGATCCTGCA | 1-10-1MOE | 832 |
| 147073 | 71145 | 71156 | CACTGATCCTGC | 1-10-1MOE | 842 |
| 147074 | 71146 | 71157 | CCACTGATCCTG | 1-10-1MOE | 845 |
| 147037 | 71351 | 71362 | GCCCAGTTCCCA | 1-10-1MOE | 863 |
| 147038 | 71352 | 71363 | CGCCCAGTTCCC | 1-10-1MOE | 855 |
| 147039 | 71353 | 71364 | CCGCCCAGTTCC | 1-10-1MOE | 850 |
| 147037 | 71497 | 71508 | GCCCAGTTCCCA | 1-10-1MOE | 863 |
| 147038 | 71498 | 71509 | CGCCCAGTTCCC | 1-10-1MOE | 855 |
| 147039 | 71499 | 71510 | CCGCCCAGTTCC | 1-10-1MOE | 850 |
| 147061 | 71641 | 71652 | TGCAATTTAATC | 1-10-1MOE | 879 |
| 147061 | 71787 | 71798 | TGCAATTTAATC | 1-10-1MOE | 879 |
Table 17: targeting SEQ ID NO:11 and have the short antisense compounds of 1 or 2 mispairing
| ISIS NO. | 5 ' target site | 3 ' target site | Sequence (5 '-3 ') | The Gapmer die body | SEQ ID NO |
| 147022 | 177 | 188 | TTGTCGATCTCC | 1-10-1MOE | 886 |
| 147023 | 178 | 189 | CTTGTCGATCTC | 1-10-1MOE | 859 |
| 147020 | 196 | 207 | GTCGATCTCCTC | 1-10-1MOE | 868 |
| 147022 | 198 | 209 | TTGTCGATCTCC | 1-10-1MOE | 886 |
| 147024 | 200 | 211 | CCTTGTCGATCT | 1-10-1MOE | 853 |
| 147026 | 202 | 213 | AGCCTTGTCGAT | 1-10-1MOE | 835 |
| 147028 | 204 | 215 | CCAGCCTTGTCG | 1-10-1MOE | 846 |
| 147029 | 205 | 216 | CCCAGCCTTGTC | 1-10-1MOE | 848 |
| 147030 | 206 | 217 | TCCCAGCCTTGT | 1-10-1MOE | 874 |
| 147036 | 212 | 223 | CCCAGTTCCCAG | 1-10-1MOE | 849 |
| 147073 | 311 | 322 | CACTGATCCTGC | 1-10-1MOE | 842 |
| 147046 | 327 | 338 | CTGTGGTCAAAA | 1-10-1MOE | 858 |
| 147047 | 328 | 339 | ACTGTGGTCAAA | 1-10-1MOE | 833 |
| 147048 | 329 | 340 | GACTGTGGTCAA | 1-10-1MOE | 888 |
| 147049 | 330 | 341 | CGACTGTGGTCA | 1-10-1MOE | 854 |
| 147050 | 331 | 342 | CCGACTGTGGTC | 1-10-1MOE | 889 |
| 147051 | 332 | 343 | TCCGACTGTGGT | 1-10-1MOE | 875 |
| 147052 | 333 | 344 | ATCCGACTGTGG | 1-10-1MOE | 837 |
| 147053 | 334 | 345 | AATCCGACTGTG | 1-10-1MOE | 829 |
| 147054 | 335 | 346 | TAATCCGACTGT | 1-10-1MOE | 871 |
| 147055 | 336 | 347 | TTAATCCGACTG | 1-10-1MOE | 884 |
| 147056 | 337 | 348 | TTTAATCCGACT | 1-10-1MOE | 887 |
| 147057 | 338 | 349 | ATTTAATCCGAC | 1-10-1MOE | 839 |
| 147058 | 339 | 350 | AATTTAATCCGA | 1-10-1MOE | 830 |
| 147060 | 341 | 352 | GCAATTTAATCC | 1-10-1MOE | 861 |
| 147061 | 342 | 353 | TGCAATTTAATC | 1-10-1MOE | 879 |
| 147062 | 1024 | 1035 | CACTGACGAGTC | 1-10-1MOE | 841 |
| 147063 | 1025 | 1036 | GCACTGACGAGT | 1-10-1MOE | 862 |
| 147068 | 1030 | 1041 | ATCCTGCACTGA | 1-10-1MOE | 838 |
| 147071 | 1033 | 1044 | CTGATCCTGCAC | 1-10-1MOE | 856 |
| 147073 | 1035 | 1046 | CACTGATCCTGC | 1-10-1MOE | 842 |
| 147074 | 1036 | 1047 | CCACTGATCCTG | 1-10-1MOE | 845 |
| 147067 | 1091 | 1102 | TCCTGCACTGAC | 1-10-1MOE | 876 |
| 147024 | 1891 | 1902 | CCTTGTCGATCT | 1-10-1MOE | 853 |
| 147026 | 1893 | 1904 | AGCCTTGTCGAT | 1-10-1MOE | 835 |
| 147029 | 1896 | 1907 | CCCAGCCTTGTC | 1-10-1MOE | 848 |
| 147036 | 1903 | 1914 | CCCAGTTCCCAG | 1-10-1MOE | 849 |
| 147039 | 1906 | 1917 | CCGCCCAGTTCC | 1-10-1MOE | 850 |
| 147019 | 1994 | 2005 | TCGATCTCCTCG | 1-10-1MOE | 877 |
| 401385 | 2815 | 2828 | CCCAGTGGGTTTGA | 2-10-2MOE | 890 |
| 147033 | 5265 | 5276 | AGTTCCCAGCCT | 1-10-1MOE | 836 |
| 147033 | 5373 | 5384 | AGTTCCCAGCCT | 1-10-1MOE | 836 |
| 147060 | 7168 | 7179 | GCAATTTAATCC | 1-10-1MOE | 861 |
| 147053 | 10527 | 10538 | AATCCGACTGTG | 1-10-1MOE | 829 |
| 147053 | 10635 | 10646 | AATCCGACTGTG | 1-10-1MOE | 829 |
| 147070 | 11604 | 11615 | TGATCCTGCACT | 1-10-1MOE | 878 |
| 147071 | 11612 | 11623 | CTGATCCTGCAC | 1-10-1MOE | 856 |
| 147072 | 12294 | 12305 | ACTGATCCTGCA | 1-10-1MOE | 832 |
| 147072 | 12299 | 12310 | ACTGATCCTGCA | 1-10-1MOE | 832 |
| 147052 | 12938 | 12949 | ATCCGACTGTGG | 1-10-1MOE | 837 |
| 147052 | 13119 | 13130 | ATCCGACTGTGG | 1-10-1MOE | 837 |
| 147047 | 13158 | 13169 | ACTGTGGTCAAA | 1-10-1MOE | 833 |
| 147048 | 13159 | 13170 | GACTGTGGTCAA | 1-10-1MOE | 888 |
| 147049 | 13160 | 13171 | CGACTGTGGTCA | 1-10-1MOE | 854 |
| 147048 | 13340 | 13351 | GACTGTGGTCAA | 1-10-1MOE | 888 |
| 147049 | 13341 | 13352 | CGACTGTGGTCA | 1-10-1MOE | 854 |
| 147051 | 13343 | 13354 | TCCGACTGTGGT | 1-10-1MOE | 875 |
| 147061 | 13497 | 13508 | TGCAATTTAATC | 1-10-1MOE | 879 |
| 147069 | 15562 | 15573 | GATCCTGCACTG | 1-10-1MOE | 860 |
| 147068 | 15743 | 15754 | ATCCTGCACTGA | 1-10-1MOE | 838 |
| 147049 | 17181 | 17192 | CGACTGTGGTCA | 1-10-1MOE | 854 |
| 147049 | 17349 | 17360 | CGACTGTGGTCA | 1-10-1MOE | 854 |
| 147047 | 22438 | 22449 | ACTGTGGTCAAA | 1-10-1MOE | 833 |
| 147047 | 24322 | 24333 | ACTGTGGTCAAA | 1-10-1MOE | 833 |
| 147045 | 24488 | 24499 | TGTGGTCAAAAG | 1-10-1MOE | 883 |
| 147039 | 25064 | 25075 | CCGCCCAGTTCC | 1-10-1MOE | 850 |
| 147057 | 25508 | 25519 | ATTTAATCCGAC | 1-10-1MOE | 839 |
| 147057 | 25676 | 25687 | ATTTAATCCGAC | 1-10-1MOE | 839 |
| 147061 | 25680 | 25691 | TGCAATTTAATC | 1-10-1MOE | 879 |
| 147069 | 28731 | 28742 | GATCCTGCACTG | 1-10-1MOE | 860 |
| 147052 | 30132 | 30143 | ATCCGACTGTGG | 1-10-1MOE | 837 |
| 147052 | 30277 | 30288 | ATCCGACTGTGG | 1-10-1MOE | 837 |
| 147036 | 32085 | 32096 | CCCAGTTCCCAG | 1-10-1MOE | 849 |
| 147072 | 32520 | 32531 | ACTGATCCTGCA | 1-10-1MOE | 832 |
| 147071 | 33058 | 33069 | CTGATCCTGCAC | 1-10-1MOE | 856 |
| 147050 | 33125 | 33136 | CCGACTGTGGTC | 1-10-1MOE | 889 |
| 147069 | 33204 | 33215 | GATCCTGCACTG | 1-10-1MOE | 860 |
| 147050 | 33273 | 33284 | CCGACTGTGGTC | 1-10-1MOE | 889 |
| 147047 | 33319 | 33330 | ACTGTGGTCAAA | 1-10-1MOE | 833 |
| 147050 | 33322 | 33333 | CCGACTGTGGTC | 1-10-1MOE | 889 |
| 147052 | 33324 | 33335 | ATCCGACTGTGG | 1-10-1MOE | 837 |
| 147049 | 33469 | 33480 | CGACTGTGGTCA | 1-10-1MOE | 854 |
| 147050 | 33470 | 33481 | CCGACTGTGGTC | 1-10-1MOE | 889 |
| 147052 | 33472 | 33483 | ATCCGACTGTGG | 1-10-1MOE | 837 |
| 147047 | 33641 | 33652 | ACTGTGGTCAAA | 1-10-1MOE | 833 |
| 147047 | 33789 | 33800 | ACTGTGGTCAAA | 1-10-1MOE | 833 |
| 147059 | 35585 | 35596 | CAATTTAATCCG | 1-10-1MOE | 840 |
| 147021 | 36241 | 36252 | TGTCGATCTCCT | 1-10-1MOE | 882 |
| 147073 | 37633 | 37644 | CACTGATCCTGC | 1-10-1MOE | 842 |
| 147033 | 42529 | 42540 | AGTTCCCAGCCT | 1-10-1MOE | 836 |
| 147050 | 45401 | 45412 | CCGACTGTGGTC | 1-10-1MOE | 889 |
| 147050 | 45549 | 45560 | CCGACTGTGGTC | 1-10-1MOE | 889 |
| 147074 | 46125 | 46136 | CCACTGATCCTG | 1-10-1MOE | 845 |
| 147057 | 46313 | 46324 | ATTTAATCCGAC | 1-10-1MOE | 839 |
| 147058 | 46462 | 46473 | AATTTAATCCGA | 1-10-1MOE | 830 |
| 147058 | 47413 | 47424 | AATTTAATCCGA | 1-10-1MOE | 830 |
| 147058 | 47561 | 47572 | AATTTAATCCGA | 1-10-1MOE | 830 |
| 147073 | 48221 | 48232 | CACTGATCCTGC | 1-10-1MOE | 842 |
| 147073 | 48369 | 48380 | CACTGATCCTGC | 1-10-1MOE | 842 |
| 147028 | 48567 | 48578 | CCAGCCTTGTCG | 1-10-1MOE | 846 |
| 147068 | 49199 | 49210 | ATCCTGCACTGA | 1-10-1MOE | 838 |
| 147036 | 50273 | 50284 | CCCAGTTCCCAG | 1-10-1MOE | 849 |
| 147040 | 53929 | 53940 | GCCGCCCAGTTC | 1-10-1MOE | 864 |
| 147047 | 54769 | 54780 | ACTGTGGTCAAA | 1-10-1MOE | 833 |
| 147048 | 54770 | 54781 | GACTGTGGTCAA | 1-10-1MOE | 888 |
| 147047 | 54915 | 54926 | ACTGTGGTCAAA | 1-10-1MOE | 833 |
| 147048 | 54916 | 54927 | GACTGTGGTCAA | 1-10-1MOE | 888 |
| 147019 | 55828 | 55839 | TCGATCTCCTCG | 1-10-1MOE | 877 |
| 147047 | 56268 | 56279 | ACTGTGGTCAAA | 1-10-1MOE | 833 |
| 147048 | 56269 | 56280 | GACTGTGGTCAA | 1-10-1MOE | 888 |
| 147049 | 56270 | 56281 | CGACTGTGGTCA | 1-10-1MOE | 854 |
| 147050 | 56271 | 56282 | CCGACTGTGGTC | 1-10-1MOE | 889 |
| 147051 | 56272 | 56283 | TCCGACTGTGGT | 1-10-1MOE | 875 |
| 147052 | 56273 | 56284 | ATCCGACTGTGG | 1-10-1MOE | 837 |
| 147053 | 56274 | 56285 | AATCCGACTGTG | 1-10-1MOE | 829 |
| 147056 | 56277 | 56288 | TTTAATCCGACT | 1-10-1MOE | 887 |
| 147057 | 56278 | 56289 | ATTTAATCCGAC | 1-10-1MOE | 839 |
| 147047 | 56414 | 56425 | ACTGTGGTCAAA | 1-10-1MOE | 833 |
| 147048 | 56415 | 56426 | GACTGTGGTCAA | 1-10-1MOE | 888 |
| 147049 | 56416 | 56427 | CGACTGTGGTCA | 1-10-1MOE | 854 |
| 147050 | 56417 | 56428 | CCGACTGTGGTC | 1-10-1MOE | 889 |
| 147052 | 56419 | 56430 | ATCCGACTGTGG | 1-10-1MOE | 837 |
| 147057 | 56424 | 56435 | ATTTAATCCGAC | 1-10-1MOE | 839 |
| 147058 | 56425 | 56436 | AATTTAATCCGA | 1-10-1MOE | 830 |
| 147059 | 56426 | 56437 | CAATTTAATCCG | 1-10-1MOE | 840 |
| 147060 | 56427 | 56438 | GCAATTTAATCC | 1-10-1MOE | 861 |
| 147046 | 57119 | 57130 | CTGTGGTCAAAA | 1-10-1MOE | 858 |
| 147071 | 58174 | 58185 | CTGATCCTGCAC | 1-10-1MOE | 856 |
| 147071 | 61130 | 61141 | CTGATCCTGCAC | 1-10-1MOE | 856 |
| 147034 | 61276 | 61287 | CAGTTCCCAGCC | 1-10-1MOE | 844 |
| 147071 | 61309 | 61320 | CTGATCCTGCAC | 1-10-1MOE | 856 |
| 147039 | 61427 | 61438 | CCGCCCAGTTCC | 1-10-1MOE | 850 |
| 147071 | 61455 | 61466 | CTGATCCTGCAC | 1-10-1MOE | 856 |
| 147073 | 62003 | 62014 | CACTGATCCTGC | 1-10-1MOE | 842 |
| 147062 | 63061 | 63072 | CACTGACGAGTC | 1-10-1MOE | 841 |
| 147068 | 63213 | 63224 | ATCCTGCACTGA | 1-10-1MOE | 838 |
| 147069 | 63292 | 63303 | GATCCTGCACTG | 1-10-1MOE | 860 |
| 147057 | 64054 | 64065 | ATTTAATCCGAC | 1-10-1MOE | 839 |
| 147057 | 64200 | 64211 | ATTTAATCCGAC | 1-10-1MOE | 839 |
| 147070 | 64427 | 64438 | TGATCCTGCACT | 1-10-1MOE | 878 |
| 147070 | 64573 | 64584 | TGATCCTGCACT | 1-10-1MOE | 878 |
| 147036 | 64684 | 64695 | CCCAGTTCCCAG | 1-10-1MOE | 849 |
| 147046 | 65018 | 65029 | CTGTGGTCAAAA | 1-10-1MOE | 858 |
| 147071 | 65557 | 65568 | CTGATCCTGCAC | 1-10-1MOE | 856 |
| 147069 | 65695 | 65706 | GATCCTGCACTG | 1-10-1MOE | 860 |
| 147047 | 66163 | 66174 | ACTGTGGTCAAA | 1-10-1MOE | 833 |
| 147047 | 66309 | 66320 | ACTGTGGTCAAA | 1-10-1MOE | 833 |
| 147028 | 67740 | 67751 | CCAGCCTTGTCG | 1-10-1MOE | 846 |
| 147046 | 68870 | 68881 | CTGTGGTCAAAA | 1-10-1MOE | 858 |
| 147047 | 68871 | 68882 | ACTGTGGTCAAA | 1-10-1MOE | 833 |
| 147048 | 68872 | 68883 | GACTGTGGTCAA | 1-10-1MOE | 888 |
| 147049 | 68873 | 68884 | CGACTGTGGTCA | 1-10-1MOE | 854 |
| 147047 | 69017 | 69028 | ACTGTGGTCAAA | 1-10-1MOE | 833 |
| 147048 | 69018 | 69029 | GACTGTGGTCAA | 1-10-1MOE | 888 |
| 147049 | 69019 | 69030 | CGACTGTGGTCA | 1-10-1MOE | 854 |
| 147071 | 69519 | 69530 | CTGATCCTGCAC | 1-10-1MOE | 856 |
| 147073 | 69521 | 69532 | CACTGATCCTGC | 1-10-1MOE | 842 |
| 147071 | 69665 | 69676 | CTGATCCTGCAC | 1-10-1MOE | 856 |
| 147072 | 69666 | 69677 | ACTGATCCTGCA | 1-10-1MOE | 832 |
| 147024 | 70466 | 70477 | CCTTGTCGATCT | 1-10-1MOE | 853 |
| 147024 | 70612 | 70623 | CCTTGTCGATCT | 1-10-1MOE | 853 |
| 147062 | 70761 | 70772 | CACTGACGAGTC | 1-10-1MOE | 841 |
| 147072 | 70998 | 71009 | ACTGATCCTGCA | 1-10-1MOE | 832 |
| 147073 | 70999 | 71010 | CACTGATCCTGC | 1-10-1MOE | 842 |
| 147072 | 71144 | 71155 | ACTGATCCTGCA | 1-10-1MOE | 832 |
| 147073 | 71145 | 71156 | CACTGATCCTGC | 1-10-1MOE | 842 |
| 147048 | 71366 | 71377 | GACTGTGGTCAA | 1-10-1MOE | 888 |
| 147048 | 71512 | 71523 | GACTGTGGTCAA | 1-10-1MOE | 888 |
Table 18: the short antisense compounds of targeting SEQ ID NO:12
| ISIS NO. | 5 ' target site | 3 ' target site | Sequence (5 '-3 ') | The Gapmer die body | Seq ID NO |
| 398163 | 20 | 31 | ATGTCAACCGGC | 1-10-1MOE | 908 |
| 384545 | 23 | 34 | CAAGTAGGATGT | 1-10-1MOE | 951 |
| 147705 | 159 | 170 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 147703 | 245 | 256 | TGGCTTCATGTC | 1-10-1MOE | 971 |
| 398090 | 283 | 296 | TTGTTCTTAGGAAG | 2-10-2MOE | 972 |
| 147704 | 285 | 296 | TTGTTCTTAGGA | 1-10-1MOE | 1012 |
| 147705 | 291 | 302 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 147709 | 311 | 322 | CCATTTTTATCA | 1-10-1MOE | 978 |
| 147733 | 349 | 360 | TTCTTGATGTCC | 1-10-1MOE | 891 |
| 147707 | 360 | 371 | TAGTCATTATCT | 1-10-1MOE | 977 |
| 147708 | 366 | 377 | TTGATATAGTCA | 1-10-1MOE | 997 |
| 390030 | 381 | 392 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147709 | 386 | 397 | CCATTTTTATCA | 1-10-1MOE | 978 |
| 147081 | 393 | 404 | GCTCCTTCCACT | 1-10-1MOE | 1006 |
| 398091 | 393 | 406 | GGGCTTCTTCCATT | 2-10-2MOE | 979 |
| 398166 | 395 | 406 | GGGCTTCTTCCA | 1-10-1MOE | 1070 |
| 147709 | 418 | 429 | CCATTTTTATCA | 1-10-1MOE | 978 |
| 147711 | 425 | 436 | AAGGGCCCTGGG | 1-10-1MOE | 1040 |
| 147712 | 461 | 472 | ACACCATCTCCC | 1-10-1MOE | 1005 |
| 147713 | 466 | 477 | CTCCCACACCAT | 1-10-1MOE | 985 |
| 147714 | 471 | 482 | TTCTGCTCCCAC | 1-10-1MOE | 986 |
| 147715 | 496 | 507 | GTTGAGCATGAC | 1-10-1MOE | 1077 |
| 147716 | 521 | 532 | TTAACGAGCCTT | 1-10-1MOE | 949 |
| 147717 | 574 | 585 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147717 | 607 | 618 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147708 | 612 | 623 | TTGATATAGTCA | 1-10-1MOE | 997 |
| 147718 | 621 | 632 | TAATATGACTTG | 1-10-1MOE | 998 |
| 147746 | 625 | 636 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398167 | 704 | 715 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 398092 | 705 | 718 | AGTCAGGCCATGTG | 2-10-2MOE | 1060 |
| 147723 | 715 | 726 | GACTCCAAAGTC | 1-10-1MOE | 892 |
| 398093 | 758 | 771 | TCGGACTTTGAAAA | 2-10-2MOE | 1009 |
| 398168 | 760 | 771 | TCGGACTTTGAA | 1-10-1MOE | 1008 |
| 147738 | 780 | 791 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 398094 | 848 | 861 | ATCAGCCAGACAGA | 2-10-2MOE | 1010 |
| 398169 | 849 | 860 | TCAGCCAGACAG | 1-10-1MOE | 909 |
| 398164 | 873 | 884 | TTGTCGATCTGC | 1-10-1MOE | 1014 |
| 147735 | 973 | 984 | GGAGAAGCGCAG | 1-10-1MOE | 1016 |
| 147737 | 984 | 995 | ACAGCCAGGTAG | 1-10-1MOE | 1067 |
| 368369 | 1025 | 1040 | TCCTGCACTGACGAGT | 3-10-3MOE | 893 |
| 368372 | 1031 | 1046 | CACTGATCCTGCACTG | 3-10-3MOE | 894 |
| 368353 | 1033 | 1046 | CACTGATCCTGCAC | 2-10-2MOE | 1007 |
| 368354 | 1035 | 1048 | TCCACTGATCCTGC | 2-10-2MOE | 1024 |
| 368388 | 1035 | 1050 | CTTCCACTGATCCTTA | 3-10-3MOE | 895 |
| 368355 | 1036 | 1049 | TTCCACTGATCCTG | 2-10-2MOE | 1025 |
| 368356 | 1037 | 1050 | CTTCCACTGATCCT | 2-10-2MOE | 1027 |
| 368376 | 1037 | 1052 | TCCTTCCACTGATCCT | 3-10-3MOE | 1028 |
| 147076 | 1038 | 1049 | TTCCACTGATCC | 1-10-1MOE | 1029 |
| 368357 | 1038 | 1051 | CCTTCCACTGATCC | 2-10-2MOE | 1046 |
| 147077 | 1039 | 1050 | CTTCCACTGATC | 1-10-1MOE | 1047 |
| 368358 | 1039 | 1052 | TCCTTCCACTGATC | 2-10-2MOE | 1031 |
| 368378 | 1039 | 1054 | GCTCCTTCCACTGATC | 3-10-3MOE | 1032 |
| 368359 | 1041 | 1054 | GCTCCTTCCACTGA | 2-10-2MOE | 1033 |
| 147080 | 1042 | 1053 | CTCCTTCCACTG | 1-10-1MOE | 1021 |
| 147081 | 1043 | 1054 | GCTCCTTCCACT | 1-10-1MOE | 1006 |
| 368360 | 1043 | 1056 | AAGCTCCTTCCACT | 2-10-2MOE | 1035 |
| 368380 | 1043 | 1058 | GAAAGCTCCTTCCACT | 3-10-3MOE | 896 |
| 147082 | 1044 | 1055 | AGCTCCTTCCAC | 1-10-1MOE | 1036 |
| 368381 | 1045 | 1060 | GGGAAAGCTCCTTCCA | 3-10-3MOE | 1037 |
| 147739 | 1107 | 1118 | CGTTTGGGTGGC | 1-10-1MOE | 1023 |
| 147741 | 1165 | 1176 | CACCCACTGGTG | 1-10-1MOE | 1055 |
| 398097 | 1194 | 1207 | GGCAGTCTTTATCC | 2-10-2MOE | 897 |
| 147742 | 1273 | 1284 | AACTTCAGTGTC | 1-10-1MOE | 1041 |
| 147743 | 1388 | 1399 | AGGGCTTCCAGT | 1-10-1MOE | 1042 |
| 147744 | 1392 | 1403 | AGGAAGGGCTTC | 1-10-1MOE | 1043 |
| 147745 | 1398 | 1409 | TTGACCAGGAAG | 1-10-1MOE | 1058 |
| 398157 | 1455 | 1468 | GGAAACATACCCTG | 2-10-2MOE | 1045 |
| 398167 | 1475 | 1486 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 398092 | 1476 | 1489 | AGTCAGGCCATGTG | 2-10-2MOE | 1060 |
| 368357 | 1596 | 1609 | CCTTCCACTGATCC | 2-10-2MOE | 1046 |
| 398160 | 1691 | 1704 | GAATAGGTTAAGGC | 2-10-2MOE | 1048 |
| 398163 | 1711 | 1722 | ATGTCAACCGGC | 1-10-1MOE | 908 |
| 147746 | 1750 | 1761 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 389949 | 1777 | 1788 | GCGCGAGCCCGA | 1-10-1MOE | 1061 |
| 398161 | 1790 | 1803 | AACAATGTGTTGTA | 2-10-2MOE | 1049 |
| 147746 | 1799 | 1810 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398163 | 1819 | 1830 | ATGTCAACCGGC | 1-10-1MOE | 908 |
| 389950 | 1848 | 1859 | CCCTGAAGGTTC | 1-10-1MOE | 1063 |
| 398164 | 1889 | 1900 | TTGTCGATCTGC | 1-10-1MOE | 1014 |
| 147702 | 1917 | 1928 | CTGGTAAATAGC | 1-10-1MOE | 898 |
| 147088 | 1971 | 1982 | CCCTCTACACCA | 1-10-1MOE | 1050 |
| 398102 | 2003 | 2016 | CTACCTGAGGATTT | 2-10-2MOE | 899 |
| 398103 | 2010 | 2023 | CCCAGTACTACCTG | 2-10-2MOE | 900 |
| 147737 | 2386 | 2397 | ACAGCCAGGTAG | 1-10-1MOE | 1067 |
| 398095 | 2407 | 2420 | CATCAGCAAGAGGC | 2-10-2MOE | 1011 |
| 398106 | 2441 | 2454 | TGGAAAACTGCACC | 2-10-2MOE | 1068 |
| 147745 | 2497 | 2508 | TTGACCAGGAAG | 1-10-1MOE | 1058 |
| 147712 | 2499 | 2510 | ACACCATCTCCC | 1-10-1MOE | 1005 |
| 147712 | 2607 | 2618 | ACACCATCTCCC | 1-10-1MOE | 1005 |
| 147745 | 2689 | 2700 | TTGACCAGGAAG | 1-10-1MOE | 1058 |
| 398167 | 2706 | 2717 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 398092 | 2707 | 2720 | AGTCAGGCCATGTG | 2-10-2MOE | 1060 |
| 398166 | 2966 | 2977 | GGGCTTCTTCCA | 1-10-1MOE | 1070 |
| 147091 | 2992 | 3003 | GTTCCCTCTACA | 1-10-1MOE | 1004 |
| 147092 | 2993 | 3004 | TGTTCCCTCTAC | 1-10-1MOE | 901 |
| 389949 | 3008 | 3019 | GCGCGAGCCCGA | 1-10-1MOE | 1061 |
| 147087 | 3149 | 3160 | CCTCTACACCAG | 1-10-1MOE | 982 |
| 147088 | 3150 | 3161 | CCCTCTACACCA | 1-10-1MOE | 1050 |
| 398113 | 3160 | 3173 | AGGAGGTTAAACCA | 2-10-2MOE | 905 |
| 147087 | 3257 | 3268 | CCTCTACACCAG | 1-10-1MOE | 982 |
| 147088 | 3258 | 3269 | CCCTCTACACCA | 1-10-1MOE | 1050 |
| 147737 | 3591 | 3602 | ACAGCCAGGTAG | 1-10-1MOE | 1067 |
| 147737 | 3617 | 3628 | ACAGCCAGGTAG | 1-10-1MOE | 1067 |
| 147079 | 3637 | 3648 | TCCTTCCACTGA | 1-10-1MOE | 1001 |
| 147080 | 3638 | 3649 | CTCCTTCCACTG | 1-10-1MOE | 1021 |
| 398095 | 3638 | 3651 | CATCAGCAAGAGGC | 2-10-2MOE | 1011 |
| 398106 | 3672 | 3685 | TGGAAAACTGCACC | 2-10-2MOE | 1068 |
| 398107 | 3678 | 3691 | TATTCCTGGAAAAC | 2-10-2MOE | 902 |
| 147691 | 3806 | 3817 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 147683 | 3848 | 3859 | GCTTACGATTGT | 1-10-1MOE | 922 |
| 147738 | 3853 | 3864 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 398167 | 3926 | 3937 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 398109 | 3945 | 3958 | CAAGAAGTGTGGTT | 2-10-2MOE | 903 |
| 398167 | 4034 | 4045 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 398110 | 4083 | 4096 | GTTCCCTTTGCAGG | 2-10-2MOE | 952 |
| 398111 | 4168 | 4181 | GTGAAAATGCTGGC | 2-10-2MOE | 904 |
| 147706 | 4238 | 4249 | GCTGACATCTCG | 1-10-1MOE | 1071 |
| 398112 | 4282 | 4295 | CAGCCTGGCACCTA | 2-10-2MOE | 1072 |
| 147746 | 4315 | 4326 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398113 | 4391 | 4404 | AGGAGGTTAAACCA | 2-10-2MOE | 905 |
| 398115 | 4484 | 4497 | AGTAAATATTGGCT | 2-10-2MOE | 1076 |
| 390030 | 4491 | 4502 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 390030 | 4537 | 4548 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147703 | 5034 | 5045 | TGGCTTCATGTC | 1-10-1MOE | 971 |
| 147684 | 5035 | 5046 | ACCCAGTCAGGG | 1-10-1MOE | 964 |
| 398125 | 5075 | 5088 | CAGTAAGGAATTTT | 2-10-2MOE | 913 |
| 147696 | 5083 | 5094 | TGGATGATTGGC | 1-10-1MOE | 906 |
| 147684 | 5143 | 5154 | ACCCAGTCAGGG | 1-10-1MOE | 964 |
| 147712 | 5366 | 5377 | ACACCATCTCCC | 1-10-1MOE | 1005 |
| 147714 | 5416 | 5427 | TTCTGCTCCCAC | 1-10-1MOE | 986 |
| 398128 | 5443 | 5456 | CTAAATTTAGTTCA | 2-10-2MOE | 911 |
| 147712 | 5474 | 5485 | ACACCATCTCCC | 1-10-1MOE | 1005 |
| 147746 | 5498 | 5509 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147714 | 5524 | 5535 | TTCTGCTCCCAC | 1-10-1MOE | 986 |
| 147736 | 5600 | 5611 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147085 | 5762 | 5773 | TCTACACCAGGT | 1-10-1MOE | 961 |
| 147679 | 5825 | 5836 | CAAAAGGATCCC | 1-10-1MOE | 907 |
| 390030 | 6803 | 6814 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 398142 | 6885 | 6898 | CCAGCACACTGGAA | 2-10-2MOE | 923 |
| 398142 | 6994 | 7007 | CCAGCACACTGGAA | 2-10-2MOE | 923 |
| 398166 | 7306 | 7317 | GGGCTTCTTCCA | 1-10-1MOE | 1070 |
| 147684 | 7551 | 7562 | ACCCAGTCAGGG | 1-10-1MOE | 964 |
| 147085 | 8308 | 8319 | TCTACACCAGGT | 1-10-1MOE | 961 |
| 147085 | 8416 | 8427 | TCTACACCAGGT | 1-10-1MOE | 961 |
| 398163 | 8473 | 8484 | ATGTCAACCGGC | 1-10-1MOE | 908 |
| 147718 | 8523 | 8534 | TAATATGACTTG | 1-10-1MOE | 998 |
| 147718 | 8631 | 8642 | TAATATGACTTG | 1-10-1MOE | 998 |
| 147691 | 8806 | 8817 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 147728 | 8835 | 8846 | GCCAGACAGAAG | 1-10-1MOE | 1013 |
| 147728 | 8943 | 8954 | GCCAGACAGAAG | 1-10-1MOE | 1013 |
| 398169 | 8946 | 8957 | TCAGCCAGACAG | 1-10-1MOE | 909 |
| 147742 | 9060 | 9071 | AACTTCAGTGTC | 1-10-1MOE | 1041 |
| 404136 | 9162 | 9175 | TAAGTGTCCCTTTG | 2-10-2MOE | 910 |
| 147746 | 9963 | 9974 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 9966 | 9977 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 9969 | 9980 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 9991 | 10002 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 10071 | 10082 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 10074 | 10085 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 10077 | 10088 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 390030 | 10170 | 10181 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147084 | 10220 | 10231 | CTACACCAGGTC | 1-10-1MOE | 993 |
| 390030 | 10278 | 10289 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147085 | 10329 | 10340 | TCTACACCAGGT | 1-10-1MOE | 961 |
| 147711 | 10684 | 10695 | AAGGGCCCTGGG | 1-10-1MOE | 1040 |
| 147711 | 10792 | 10803 | AAGGGCCCTGGG | 1-10-1MOE | 1040 |
| 398128 | 11333 | 11346 | CTAAATTTAGTTCA | 2-10-2MOE | 911 |
| 147707 | 11960 | 11971 | TAGTCATTATCT | 1-10-1MOE | 977 |
| 147707 | 11965 | 11976 | TAGTCATTATCT | 1-10-1MOE | 977 |
| 147090 | 12013 | 12024 | TTCCCTCTACAC | 1-10-1MOE | 955 |
| 398096 | 12146 | 12159 | GGAGAAGCGCAGCT | 2-10-2MOE | 1015 |
| 398166 | 12214 | 12225 | GGGCTTCTTCCA | 1-10-1MOE | 1070 |
| 398135 | 12308 | 12321 | GACTACATTTTACA | 2-10-2MOE | 912 |
| 147741 | 12389 | 12400 | CACCCACTGGTG | 1-10-1MOE | 1055 |
| 398125 | 12431 | 12444 | CAGTAAGGAATTTT | 2-10-2MOE | 913 |
| 147714 | 12585 | 12596 | TTCTGCTCCCAC | 1-10-1MOE | 986 |
| 147718 | 12594 | 12605 | TAATATGACTTG | 1-10-1MOE | 998 |
| 398125 | 12612 | 12625 | CAGTAAGGAATTTT | 2-10-2MOE | 913 |
| 147737 | 12803 | 12814 | ACAGCCAGGTAG | 1-10-1MOE | 1067 |
| 147746 | 12876 | 12887 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147691 | 12900 | 12911 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 398137 | 13111 | 13124 | TGTGTCCCTCAGTC | 2-10-2MOE | 914 |
| 398138 | 13254 | 13267 | AACATCAAGCTTGA | 2-10-2MOE | 931 |
| 398137 | 13292 | 13305 | TGTGTCCCTCAGTC | 2-10-2MOE | 914 |
| 398138 | 13435 | 13448 | AACATCAAGCTTGA | 2-10-2MOE | 931 |
| 389764 | 14020 | 14031 | CTGCAACATGAT | 1-9-2MOE | 1018 |
| 389948 | 14067 | 14078 | CCGTTGGACCCC | 1-10-1MOE | 915 |
| 389948 | 14248 | 14259 | CCGTTGGACCCC | 1-10-1MOE | 915 |
| 147738 | 14279 | 14290 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 147698 | 14572 | 14583 | CCCGCCACCACC | 1-10-1MOE | 928 |
| 147717 | 14750 | 14761 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147717 | 14932 | 14943 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 398167 | 15374 | 15385 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 147736 | 16444 | 16455 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147746 | 16510 | 16521 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147738 | 16590 | 16601 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 147746 | 16676 | 16687 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398167 | 16797 | 16808 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 398144 | 16911 | 16924 | GACAGCTTCTATAA | 2-10-2MOE | 916 |
| 389764 | 17096 | 17107 | CTGCAACATGAT | 1-9-2MOE | 1018 |
| 147709 | 17238 | 17249 | CCATTTTTATCA | 1-10-1MOE | 978 |
| 147709 | 17406 | 17417 | CCATTTTTATCA | 1-10-1MOE | 978 |
| 147695 | 17466 | 17477 | TCATTCCCCACT | 1-10-1MOE | 984 |
| 147746 | 17497 | 17508 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147088 | 17539 | 17550 | CCCTCTACACCA | 1-10-1MOE | 1050 |
| 147711 | 17808 | 17819 | AAGGGCCCTGGG | 1-10-1MOE | 1040 |
| 147711 | 17976 | 17987 | AAGGGCCCTGGG | 1-10-1MOE | 1040 |
| 398139 | 18049 | 18062 | AGTGACTGACCACA | 2-10-2MOE | 917 |
| 398139 | 18217 | 18230 | AGTGACTGACCACA | 2-10-2MOE | 917 |
| 398140 | 18596 | 18609 | GTAGCATAGAGCCT | 2-10-2MOE | 918 |
| 398140 | 18764 | 18777 | GTAGCATAGAGCCT | 2-10-2MOE | 918 |
| 398167 | 18927 | 18938 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 398141 | 18947 | 18960 | CAGATCTTGTCAAG | 2-10-2MOE | 919 |
| 398167 | 19095 | 19106 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 398141 | 19115 | 19128 | CAGATCTTGTCAAG | 2-10-2MOE | 919 |
| 147746 | 19207 | 19218 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147711 | 19508 | 19519 | AAGGGCCCTGGG | 1-10-1MOE | 1040 |
| 147729 | 19554 | 19565 | GTAAGAGGCAGG | 1-10-1MOE | 920 |
| 147718 | 19617 | 19628 | TAATATGACTTG | 1-10-1MOE | 998 |
| 390030 | 19618 | 19629 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147701 | 19671 | 19682 | CCATGGCGGGAC | 1-10-1MOE | 921 |
| 147711 | 19676 | 19687 | AAGGGCCCTGGG | 1-10-1MOE | 1040 |
| 147718 | 19785 | 19796 | TAATATGACTTG | 1-10-1MOE | 998 |
| 147079 | 20515 | 20526 | TCCTTCCACTGA | 1-10-1MOE | 1001 |
| 389764 | 20620 | 20631 | CTGCAACATGAT | 1-9-2MOE | 1018 |
| 398142 | 20653 | 20666 | CCAGCACACTGGAA | 2-10-2MOE | 923 |
| 147078 | 20682 | 20693 | CCTTCCACTGAT | 1-10-1MOE | 1044 |
| 147079 | 20683 | 20694 | TCCTTCCACTGA | 1-10-1MOE | 1001 |
| 147080 | 20704 | 20715 | CTCCTTCCACTG | 1-10-1MOE | 1021 |
| 147081 | 20705 | 20716 | GCTCCTTCCACT | 1-10-1MOE | 1006 |
| 389965 | 20788 | 20799 | CTGCAACATGAT | 1-10-1MOE | 1018 |
| 147746 | 20870 | 20881 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 21038 | 21049 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147717 | 21080 | 21091 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147076 | 21222 | 21233 | TTCCACTGATCC | 1-10-1MOE | 1029 |
| 398094 | 21441 | 21454 | ATCAGCCAGACAGA | 2-10-2MOE | 1010 |
| 147746 | 21633 | 21644 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147738 | 21884 | 21895 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 147683 | 21939 | 21950 | GCTTACGATTGT | 1-10-1MOE | 922 |
| 147743 | 22213 | 22224 | AGGGCTTCCAGT | 1-10-1MOE | 1042 |
| 147736 | 22759 | 22770 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147736 | 22927 | 22938 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 398142 | 23008 | 23021 | CCAGCACACTGGAA | 2-10-2MOE | 923 |
| 398147 | 23784 | 23797 | CTACAGGACAATAC | 2-10-2MOE | 957 |
| 398147 | 23952 | 23965 | CTACAGGACAATAC | 2-10-2MOE | 957 |
| 147713 | 24434 | 24445 | CTCCCACACCAT | 1-10-1MOE | 985 |
| 389965 | 24543 | 24554 | CTGCAACATGAT | 1-10-1MOE | 1018 |
| 147713 | 24602 | 24613 | CTCCCACACCAT | 1-10-1MOE | 985 |
| 389965 | 24711 | 24722 | CTGCAACATGAT | 1-10-1MOE | 1018 |
| 147746 | 25384 | 25395 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398143 | 25505 | 25518 | GTCAGTCCCAGCTA | 2-10-2MOE | 924 |
| 147691 | 25610 | 25621 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 398130 | 25672 | 25685 | TTAGTATGACAGCT | 2-10-2MOE | 925 |
| 147746 | 25810 | 25821 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 25978 | 25989 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 26172 | 26183 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398151 | 26718 | 26731 | TCAGTGTAGGAAGA | 2-10-2MOE | 926 |
| 147728 | 26917 | 26928 | GCCAGACAGAAG | 1-10-1MOE | 1013 |
| 398152 | 27708 | 27721 | TGAATATACAGATG | 2-10-2MOE | 927 |
| 147698 | 28629 | 28640 | CCCGCCACCACC | 1-10-1MOE | 928 |
| 389965 | 28714 | 28725 | CTGCAACATGAT | 1-10-1MOE | 1018 |
| 389764 | 28714 | 28725 | CTGCAACATGAT | 1-9-2MOE | 1018 |
| 389764 | 28861 | 28872 | CTGCAACATGAT | 1-9-2MOE | 1018 |
| 390030 | 29945 | 29956 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147744 | 30654 | 30665 | AGGAAGGGCTTC | 1-10-1MOE | 1043 |
| 147093 | 30836 | 30847 | TTGTTCCCTCTA | 1-10-1MOE | 929 |
| 147746 | 30957 | 30968 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 31105 | 31116 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 390030 | 31477 | 31488 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 384545 | 31829 | 31840 | CAAGTAGGATGT | 1-10-1MOE | 951 |
| 384545 | 31977 | 31988 | CAAGTAGGATGT | 1-10-1MOE | 951 |
| 401382 | 32094 | 32107 | TCTACCTGAGTCCA | 2-10-2MOE | 930 |
| 147089 | 32387 | 32398 | TCCCTCTACACC | 1-10-1MOE | 956 |
| 389950 | 32949 | 32960 | CCCTGAAGGTTC | 1-10-1MOE | 1063 |
| 398165 | 33002 | 33013 | GTTCTTAGGAAG | 1-10-1MOE | 968 |
| 147081 | 33073 | 33084 | GCTCCTTCCACT | 1-10-1MOE | 1006 |
| 147082 | 33074 | 33085 | AGCTCCTTCCAC | 1-10-1MOE | 1036 |
| 389950 | 33097 | 33108 | CCCTGAAGGTTC | 1-10-1MOE | 1063 |
| 147736 | 33160 | 33171 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147081 | 33221 | 33232 | GCTCCTTCCACT | 1-10-1MOE | 1006 |
| 368360 | 33221 | 33234 | AAGCTCCTTCCACT | 2-10-2MOE | 1035 |
| 147082 | 33222 | 33233 | AGCTCCTTCCAC | 1-10-1MOE | 1036 |
| 398138 | 33244 | 33257 | AACATCAAGCTTGA | 2-10-2MOE | 931 |
| 147746 | 33250 | 33261 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398138 | 33392 | 33405 | AACATCAAGCTTGA | 2-10-2MOE | 931 |
| 401383 | 33588 | 33601 | GATCACCTTCAGAG | 2-10-2MOE | 932 |
| 147746 | 33886 | 33897 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 34606 | 34617 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398165 | 34704 | 34715 | GTTCTTAGGAAG | 1-10-1MOE | 968 |
| 147717 | 34745 | 34756 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147746 | 34754 | 34765 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398165 | 34852 | 34863 | GTTCTTAGGAAG | 1-10-1MOE | 968 |
| 147717 | 34893 | 34904 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 401384 | 34905 | 34918 | TGAACACATCACTA | 2-10-2MOE | 933 |
| 147738 | 35391 | 35402 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 147736 | 35396 | 35407 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147738 | 35539 | 35550 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 147691 | 35554 | 35565 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 147691 | 35702 | 35713 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 147746 | 35814 | 35825 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 401385 | 36109 | 36122 | CCCAGTGGGTTTGA | 2-10-2MOE | 890 |
| 147691 | 36360 | 36371 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 147746 | 36416 | 36427 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147731 | 36620 | 36631 | TTTCCTCTTGTC | 1-10-1MOE | 934 |
| 147714 | 37881 | 37892 | TTCTGCTCCCAC | 1-10-1MOE | 986 |
| 147714 | 38029 | 38040 | TTCTGCTCCCAC | 1-10-1MOE | 986 |
| 147681 | 38512 | 38523 | ATGTCATTAAAC | 1-10-1MOE | 965 |
| 401386 | 38516 | 38529 | TAATTGATGTCAAT | 2-10-2MOE | 935 |
| 401387 | 38518 | 38531 | AGTAATTGATGTCA | 2-10-2MOE | 936 |
| 401388 | 38520 | 38533 | ACAGTAATTGATGT | 2-10-2MOE | 937 |
| 401389 | 38522 | 38535 | TTACAGTAATTGAT | 2-10-2MOE | 938 |
| 401390 | 38524 | 38537 | ACTTACAGTAATTG | 2-10-2MOE | 939 |
| 401391 | 38526 | 38539 | AGACTTACAGTAAT | 2-10-2MOE | 940 |
| 401392 | 38528 | 38541 | TCAGACTTACAGTA | 2-10-2MOE | 941 |
| 401393 | 38530 | 38543 | AATCAGACTTACAG | 2-10-2MOE | 942 |
| 401394 | 38532 | 38545 | TGAATCAGACTTAC | 2-10-2MOE | 943 |
| 401395 | 38534 | 38547 | AATGAATCAGACTT | 2-10-2MOE | 944 |
| 147738 | 38909 | 38920 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 147738 | 39057 | 39068 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 390030 | 39249 | 39260 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 390030 | 39397 | 39408 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 401396 | 39488 | 39501 | TGCAGGATGTTGAG | 2-10-2MOE | 945 |
| 147717 | 39545 | 39556 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147746 | 39641 | 39652 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147717 | 39693 | 39704 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147746 | 39729 | 39740 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 39877 | 39888 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 40185 | 40196 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 40478 | 40489 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398166 | 40589 | 40600 | GGGCTTCTTCCA | 1-10-1MOE | 1070 |
| 147735 | 40662 | 40673 | GGAGAAGCGCAG | 1-10-1MOE | 1016 |
| 147746 | 40706 | 40717 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398166 | 40737 | 40748 | GGGCTTCTTCCA | 1-10-1MOE | 1070 |
| 147746 | 40854 | 40865 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 401397 | 41012 | 41025 | CTGGTCAGCATTGA | 2-10-2MOE | 946 |
| 147718 | 41070 | 41081 | TAATATGACTTG | 1-10-1MOE | 998 |
| 147718 | 41218 | 41229 | TAATATGACTTG | 1-10-1MOE | 998 |
| 147717 | 41221 | 41232 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147717 | 41369 | 41380 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147717 | 41599 | 41610 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147717 | 41747 | 41758 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 401398 | 41768 | 41781 | CAAAGTCCCTTAGC | 2-10-2MOE | 947 |
| 390030 | 42056 | 42067 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 398153 | 42157 | 42170 | ATTTCTCTTACAGG | 2-10-2MOE | 948 |
| 398153 | 42305 | 42318 | ATTTCTCTTACAGG | 2-10-2MOE | 948 |
| 147710 | 42691 | 42702 | TATAGCTCCTCT | 1-10-1MOE | 994 |
| 147079 | 43322 | 43333 | TCCTTCCACTGA | 1-10-1MOE | 1001 |
| 147080 | 43323 | 43334 | CTCCTTCCACTG | 1-10-1MOE | 1021 |
| 147716 | 43477 | 43488 | TTAACGAGCCTT | 1-10-1MOE | 949 |
| 147746 | 43992 | 44003 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147736 | 44137 | 44148 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 384545 | 44242 | 44253 | CAAGTAGGATGT | 1-10-1MOE | 951 |
| 147687 | 44354 | 44365 | CGACACGGGAAC | 1-10-1MOE | 950 |
| 384545 | 44390 | 44401 | CAAGTAGGATGT | 1-10-1MOE | 951 |
| 398110 | 44713 | 44726 | GTTCCCTTTGCAGG | 2-10-2MOE | 952 |
| 147705 | 45092 | 45103 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 147705 | 45240 | 45251 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 147074 | 45977 | 45988 | CCACTGATCCTG | 1-10-1MOE | 845 |
| 147075 | 45978 | 45989 | TCCACTGATCCT | 1-10-1MOE | 1026 |
| 147076 | 45979 | 45990 | TTCCACTGATCC | 1-10-1MOE | 1029 |
| 147076 | 46127 | 46138 | TTCCACTGATCC | 1-10-1MOE | 1029 |
| 401399 | 46247 | 46260 | ATTAGCCATATCTC | 2-10-2MOE | 953 |
| 147705 | 46555 | 46566 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 147714 | 46685 | 46696 | TTCTGCTCCCAC | 1-10-1MOE | 986 |
| 147705 | 46703 | 46714 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 390030 | 46859 | 46870 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 390030 | 46933 | 46944 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147681 | 46984 | 46995 | ATGTCATTAAAC | 1-10-1MOE | 965 |
| 390030 | 47007 | 47018 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147746 | 47023 | 47034 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 390030 | 47081 | 47092 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147681 | 47132 | 47143 | ATGTCATTAAAC | 1-10-1MOE | 965 |
| 147746 | 47171 | 47182 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 401400 | 47411 | 47424 | AGCATTCAGCAGTG | 2-10-2MOE | 954 |
| 147746 | 47461 | 47472 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147086 | 47608 | 47619 | CTCTACACCAGG | 1-10-1MOE | 969 |
| 147087 | 47609 | 47620 | CCTCTACACCAG | 1-10-1MOE | 982 |
| 147088 | 47610 | 47621 | CCCTCTACACCA | 1-10-1MOE | 1050 |
| 147090 | 47612 | 47623 | TTCCCTCTACAC | 1-10-1MOE | 955 |
| 147691 | 47729 | 47740 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 147086 | 47756 | 47767 | CTCTACACCAGG | 1-10-1MOE | 969 |
| 147088 | 47758 | 47769 | CCCTCTACACCA | 1-10-1MOE | 1050 |
| 147089 | 47759 | 47770 | TCCCTCTACACC | 1-10-1MOE | 956 |
| 390030 | 47847 | 47858 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 390030 | 47995 | 48006 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147691 | 48393 | 48404 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 398147 | 48887 | 48900 | CTACAGGACAATAC | 2-10-2MOE | 957 |
| 147706 | 49133 | 49144 | GCTGACATCTCG | 1-10-1MOE | 1071 |
| 147706 | 49281 | 49292 | GCTGACATCTCG | 1-10-1MOE | 1071 |
| 398168 | 49742 | 49753 | TCGGACTTTGAA | 1-10-1MOE | 1008 |
| 401401 | 49791 | 49804 | AACTGGGTTAAGTA | 2-10-2MOE | 958 |
| 147689 | 49936 | 49947 | CAGAGAAGGTCT | 1-10-1MOE | 987 |
| 401402 | 50192 | 50205 | TGAACACGCTATCC | 2-10-2MOE | 959 |
| 398117 | 50241 | 50254 | TTTCCACTTGGGTG | 2-10-2MOE | 960 |
| 147736 | 50582 | 50593 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 398168 | 50703 | 50714 | TCGGACTTTGAA | 1-10-1MOE | 1008 |
| 398168 | 50849 | 50860 | TCGGACTTTGAA | 1-10-1MOE | 1008 |
| 147746 | 51019 | 51030 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147708 | 51101 | 51112 | TTGATATAGTCA | 1-10-1MOE | 997 |
| 147746 | 51178 | 51189 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147708 | 51247 | 51258 | TTGATATAGTCA | 1-10-1MOE | 997 |
| 147083 | 51281 | 51292 | TACACCAGGTCA | 1-10-1MOE | 973 |
| 147081 | 51287 | 51298 | GCTCCTTCCACT | 1-10-1MOE | 1006 |
| 147082 | 51288 | 51299 | AGCTCCTTCCAC | 1-10-1MOE | 1036 |
| 147746 | 51331 | 51342 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147085 | 51416 | 51427 | TCTACACCAGGT | 1-10-1MOE | 961 |
| 147083 | 51427 | 51438 | TACACCAGGTCA | 1-10-1MOE | 973 |
| 147081 | 51433 | 51444 | GCTCCTTCCACT | 1-10-1MOE | 1006 |
| 147082 | 51434 | 51445 | AGCTCCTTCCAC | 1-10-1MOE | 1036 |
| 147728 | 51522 | 51533 | GCCAGACAGAAG | 1-10-1MOE | 1013 |
| 147085 | 51562 | 51573 | TCTACACCAGGT | 1-10-1MOE | 961 |
| 147081 | 51633 | 51644 | GCTCCTTCCACT | 1-10-1MOE | 1006 |
| 368360 | 51633 | 51646 | AAGCTCCTTCCACT | 2-10-2MOE | 1035 |
| 147082 | 51634 | 51645 | AGCTCCTTCCAC | 1-10-1MOE | 1036 |
| 368361 | 51635 | 51648 | GAAAGCTCCTTCCA | 2-10-2MOE | 962 |
| 368360 | 51779 | 51792 | AAGCTCCTTCCACT | 2-10-2MOE | 1035 |
| 147082 | 51780 | 51791 | AGCTCCTTCCAC | 1-10-1MOE | 1036 |
| 147736 | 51859 | 51870 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147684 | 51867 | 51878 | ACCCAGTCAGGG | 1-10-1MOE | 964 |
| 147746 | 51918 | 51929 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147077 | 51988 | 51999 | CTTCCACTGATC | 1-10-1MOE | 1047 |
| 147746 | 52064 | 52075 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147084 | 52125 | 52136 | CTACACCAGGTC | 1-10-1MOE | 993 |
| 147079 | 52136 | 52147 | TCCTTCCACTGA | 1-10-1MOE | 1001 |
| 147681 | 52231 | 52242 | ATGTCATTAAAC | 1-10-1MOE | 965 |
| 147084 | 52271 | 52282 | CTACACCAGGTC | 1-10-1MOE | 993 |
| 147691 | 52312 | 52323 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 401403 | 52318 | 52331 | TTTCCTAGGAGGTG | 2-10-2MOE | 967 |
| 398167 | 52527 | 52538 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 147703 | 52670 | 52681 | TGGCTTCATGTC | 1-10-1MOE | 971 |
| 398167 | 52673 | 52684 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 398165 | 52708 | 52719 | GTTCTTAGGAAG | 1-10-1MOE | 968 |
| 398090 | 52708 | 52721 | TTGTTCTTAGGAAG | 2-10-2MOE | 972 |
| 147705 | 52716 | 52727 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 147682 | 52717 | 52728 | CGGGTACTATGG | 1-10-1MOE | 992 |
| 398167 | 52762 | 52773 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 147703 | 52816 | 52827 | TGGCTTCATGTC | 1-10-1MOE | 971 |
| 398090 | 52854 | 52867 | TTGTTCTTAGGAAG | 2-10-2MOE | 972 |
| 147704 | 52856 | 52867 | TTGTTCTTAGGA | 1-10-1MOE | 1012 |
| 147705 | 52862 | 52873 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 398167 | 52908 | 52919 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 147084 | 53704 | 53715 | CTACACCAGGTC | 1-10-1MOE | 993 |
| 147088 | 53708 | 53719 | CCCTCTACACCA | 1-10-1MOE | 1050 |
| 147083 | 53849 | 53860 | TACACCAGGTCA | 1-10-1MOE | 973 |
| 147084 | 53850 | 53861 | CTACACCAGGTC | 1-10-1MOE | 993 |
| 147086 | 53852 | 53863 | CTCTACACCAGG | 1-10-1MOE | 969 |
| 147088 | 53854 | 53865 | CCCTCTACACCA | 1-10-1MOE | 1050 |
| 398167 | 53870 | 53881 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 147703 | 54137 | 54148 | TGGCTTCATGTC | 1-10-1MOE | 971 |
| 398155 | 54172 | 54185 | TGTTTTTACACAGA | 2-10-2MOE | 970 |
| 390030 | 54263 | 54274 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147705 | 54275 | 54286 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 147703 | 54283 | 54294 | TGGCTTCATGTC | 1-10-1MOE | 971 |
| 390030 | 54409 | 54420 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147704 | 54965 | 54976 | TTGTTCTTAGGA | 1-10-1MOE | 1012 |
| 147705 | 54971 | 54982 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 398090 | 55109 | 55122 | TTGTTCTTAGGAAG | 2-10-2MOE | 972 |
| 147705 | 55117 | 55128 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 147083 | 55206 | 55217 | TACACCAGGTCA | 1-10-1MOE | 973 |
| 147084 | 55207 | 55218 | CTACACCAGGTC | 1-10-1MOE | 993 |
| 147084 | 55353 | 55364 | CTACACCAGGTC | 1-10-1MOE | 993 |
| 147705 | 55524 | 55535 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 147685 | 55602 | 55613 | GGCTGACATTCA | 1-10-1MOE | 975 |
| 401404 | 55638 | 55651 | TGAGCTACAGTAGG | 2-10-2MOE | 974 |
| 147685 | 55748 | 55759 | GGCTGACATTCA | 1-10-1MOE | 975 |
| 147712 | 55819 | 55830 | ACACCATCTCCC | 1-10-1MOE | 1005 |
| 147712 | 55965 | 55976 | ACACCATCTCCC | 1-10-1MOE | 1005 |
| 147707 | 56300 | 56311 | TAGTCATTATCT | 1-10-1MOE | 977 |
| 147708 | 56306 | 56317 | TTGATATAGTCA | 1-10-1MOE | 997 |
| 390030 | 56321 | 56332 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147709 | 56326 | 56337 | CCATTTTTATCA | 1-10-1MOE | 978 |
| 398091 | 56333 | 56346 | GGGCTTCTTCCATT | 2-10-2MOE | 979 |
| 401405 | 56408 | 56421 | TGGTCAACTGAAAG | 2-10-2MOE | 976 |
| 147707 | 56446 | 56457 | TAGTCATTATCT | 1-10-1MOE | 977 |
| 147708 | 56452 | 56463 | TTGATATAGTCA | 1-10-1MOE | 997 |
| 147709 | 56472 | 56483 | CCATTTTTATCA | 1-10-1MOE | 978 |
| 398091 | 56479 | 56492 | GGGCTTCTTCCATT | 2-10-2MOE | 979 |
| 401406 | 56570 | 56583 | GGTGTGGATAACAG | 2-10-2MOE | 980 |
| 368366 | 56664 | 56677 | CTGATCCTTAGAAG | 2-10-2MOE | 1019 |
| 398148 | 57157 | 57170 | TCATAACTATTAAG | 2-10-2MOE | 981 |
| 147082 | 57220 | 57231 | AGCTCCTTCCAC | 1-10-1MOE | 1036 |
| 398148 | 57303 | 57316 | TCATAACTATTAAG | 2-10-2MOE | 981 |
| 147082 | 57366 | 57377 | AGCTCCTTCCAC | 1-10-1MOE | 1036 |
| 147743 | 57758 | 57769 | AGGGCTTCCAGT | 1-10-1MOE | 1042 |
| 398093 | 57963 | 57976 | TCGGACTTTGAAAA | 2-10-2MOE | 1009 |
| 398093 | 58109 | 58122 | TCGGACTTTGAAAA | 2-10-2MOE | 1009 |
| 147735 | 58279 | 58290 | GGAGAAGCGCAG | 1-10-1MOE | 1016 |
| 147087 | 58821 | 58832 | CCTCTACACCAG | 1-10-1MOE | 982 |
| 147087 | 58967 | 58978 | CCTCTACACCAG | 1-10-1MOE | 982 |
| 390030 | 59180 | 59191 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 390030 | 59326 | 59337 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147711 | 59357 | 59368 | AAGGGCCCTGGG | 1-10-1MOE | 1040 |
| 147743 | 59382 | 59393 | AGGGCTTCCAGT | 1-10-1MOE | 1042 |
| 147711 | 59503 | 59514 | AAGGGCCCTGGG | 1-10-1MOE | 1040 |
| 147711 | 59675 | 59686 | AAGGGCCCTGGG | 1-10-1MOE | 1040 |
| 401407 | 59710 | 59723 | CAGCTTAGGCAGAG | 2-10-2MOE | 983 |
| 147712 | 59711 | 59722 | ACACCATCTCCC | 1-10-1MOE | 1005 |
| 147713 | 59716 | 59727 | CTCCCACACCAT | 1-10-1MOE | 985 |
| 147714 | 59721 | 59732 | TTCTGCTCCCAC | 1-10-1MOE | 986 |
| 147695 | 59722 | 59733 | TCATTCCCCACT | 1-10-1MOE | 984 |
| 147715 | 59746 | 59757 | GTTGAGCATGAC | 1-10-1MOE | 1077 |
| 147711 | 59821 | 59832 | AAGGGCCCTGGG | 1-10-1MOE | 1040 |
| 390030 | 59847 | 59858 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147712 | 59857 | 59868 | ACACCATCTCCC | 1-10-1MOE | 1005 |
| 147713 | 59862 | 59873 | CTCCCACACCAT | 1-10-1MOE | 985 |
| 147714 | 59867 | 59878 | TTCTGCTCCCAC | 1-10-1MOE | 986 |
| 390030 | 59993 | 60004 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 389949 | 60471 | 60482 | GCGCGAGCCCGA | 1-10-1MOE | 1061 |
| 147746 | 60619 | 60630 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147689 | 61113 | 61124 | CAGAGAAGGTCT | 1-10-1MOE | 987 |
| 398105 | 61267 | 61280 | TGCACAGGCAGGTT | 2-10-2MOE | 1066 |
| 147680 | 61473 | 61484 | GTATGCACTGCT | 1-10-1MOE | 988 |
| 147080 | 61757 | 61768 | CTCCTTCCACTG | 1-10-1MOE | 1021 |
| 147078 | 61901 | 61912 | CCTTCCACTGAT | 1-10-1MOE | 1044 |
| 147079 | 61902 | 61913 | TCCTTCCACTGA | 1-10-1MOE | 1001 |
| 147088 | 62215 | 62226 | CCCTCTACACCA | 1-10-1MOE | 1050 |
| 401408 | 62600 | 62613 | CAATGAAGCACAGG | 2-10-2MOE | 989 |
| 147688 | 62843 | 62854 | TCCCAAACAAAT | 1-10-1MOE | 990 |
| 147746 | 63102 | 63113 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 63248 | 63259 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 401409 | 63430 | 63443 | ATTCTTAACACAGA | 2-10-2MOE | 991 |
| 147682 | 63483 | 63494 | CGGGTACTATGG | 1-10-1MOE | 992 |
| 147084 | 63677 | 63688 | CTACACCAGGTC | 1-10-1MOE | 993 |
| 147710 | 64847 | 64858 | TATAGCTCCTCT | 1-10-1MOE | 994 |
| 147710 | 64993 | 65004 | TATAGCTCCTCT | 1-10-1MOE | 994 |
| 147746 | 65151 | 65162 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 401410 | 65263 | 65276 | CATTTAGGGTCTAA | 2-10-2MOE | 995 |
| 147717 | 65862 | 65873 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147717 | 65895 | 65906 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147708 | 65900 | 65911 | TTGATATAGTCA | 1-10-1MOE | 997 |
| 147718 | 65909 | 65920 | TAATATGACTTG | 1-10-1MOE | 998 |
| 147717 | 66008 | 66019 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147717 | 66041 | 66052 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147708 | 66046 | 66057 | TTGATATAGTCA | 1-10-1MOE | 997 |
| 147718 | 66055 | 66066 | TAATATGACTTG | 1-10-1MOE | 998 |
| 401411 | 66123 | 66136 | AGCCGCCTGAAGTG | 2-10-2MOE | 999 |
| 147697 | 66497 | 66508 | CCCCAGCAGCGG | 1-10-1MOE | 1000 |
| 368377 | 66562 | 66577 | CTCCTTCCACTGATCC | 3-10-3MOE | 1030 |
| 147077 | 66563 | 66574 | CTTCCACTGATC | 1-10-1MOE | 1047 |
| 368358 | 66563 | 66576 | TCCTTCCACTGATC | 2-10-2MOE | 1031 |
| 147078 | 66564 | 66575 | CCTTCCACTGAT | 1-10-1MOE | 1044 |
| 147079 | 66565 | 66576 | TCCTTCCACTGA | 1-10-1MOE | 1001 |
| 147080 | 66566 | 66577 | CTCCTTCCACTG | 1-10-1MOE | 1021 |
| 147697 | 66643 | 66654 | CCCCAGCAGCGG | 1-10-1MOE | 1000 |
| 368358 | 66709 | 66722 | TCCTTCCACTGATC | 2-10-2MOE | 1031 |
| 147078 | 66710 | 66721 | CCTTCCACTGAT | 1-10-1MOE | 1044 |
| 147079 | 66711 | 66722 | TCCTTCCACTGA | 1-10-1MOE | 1001 |
| 147075 | 66999 | 67010 | TCCACTGATCCT | 1-10-1MOE | 1026 |
| 147705 | 67067 | 67078 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 147088 | 67409 | 67420 | CCCTCTACACCA | 1-10-1MOE | 1050 |
| 147080 | 67430 | 67441 | CTCCTTCCACTG | 1-10-1MOE | 1021 |
| 147082 | 67432 | 67443 | AGCTCCTTCCAC | 1-10-1MOE | 1036 |
| 147737 | 67455 | 67466 | ACAGCCAGGTAG | 1-10-1MOE | 1067 |
| 147088 | 67555 | 67566 | CCCTCTACACCA | 1-10-1MOE | 1050 |
| 147082 | 67578 | 67589 | AGCTCCTTCCAC | 1-10-1MOE | 1036 |
| 401412 | 67637 | 67650 | TAAATCCTCTAGCA | 2-10-2MOE | 1003 |
| 147091 | 67729 | 67740 | GTTCCCTCTACA | 1-10-1MOE | 1004 |
| 147742 | 67737 | 67748 | AACTTCAGTGTC | 1-10-1MOE | 1041 |
| 147712 | 68527 | 68538 | ACACCATCTCCC | 1-10-1MOE | 1005 |
| 147712 | 68673 | 68684 | ACACCATCTCCC | 1-10-1MOE | 1005 |
| 147711 | 68760 | 68771 | AAGGGCCCTGGG | 1-10-1MOE | 1040 |
| 147711 | 68906 | 68917 | AAGGGCCCTGGG | 1-10-1MOE | 1040 |
| 389965 | 69271 | 69282 | CTGCAACATGAT | 1-10-1MOE | 1018 |
| 389965 | 69417 | 69428 | CTGCAACATGAT | 1-10-1MOE | 1018 |
| 368353 | 69519 | 69532 | CACTGATCCTGCAC | 2-10-2MOE | 1007 |
| 147080 | 69630 | 69641 | CTCCTTCCACTG | 1-10-1MOE | 1021 |
| 147081 | 69631 | 69642 | GCTCCTTCCACT | 1-10-1MOE | 1006 |
| 368353 | 69665 | 69678 | CACTGATCCTGCAC | 2-10-2MOE | 1007 |
| 398167 | 69757 | 69768 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 398092 | 69758 | 69771 | AGTCAGGCCATGTG | 2-10-2MOE | 1060 |
| 398093 | 69811 | 69824 | TCGGACTTTGAAAA | 2-10-2MOE | 1009 |
| 398168 | 69813 | 69824 | TCGGACTTTGAA | 1-10-1MOE | 1008 |
| 398167 | 69903 | 69914 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 398093 | 69957 | 69970 | TCGGACTTTGAAAA | 2-10-2MOE | 1009 |
| 398094 | 70047 | 70060 | ATCAGCCAGACAGA | 2-10-2MOE | 1010 |
| 398095 | 70065 | 70078 | CATCAGCAAGAGGC | 2-10-2MOE | 1011 |
| 147704 | 70137 | 70148 | TTGTTCTTAGGA | 1-10-1MOE | 1012 |
| 147728 | 70450 | 70461 | GCCAGACAGAAG | 1-10-1MOE | 1013 |
| 398164 | 70464 | 70475 | TTGTCGATCTGC | 1-10-1MOE | 1014 |
| 398096 | 70562 | 70575 | GGAGAAGCGCAGCT | 2-10-2MOE | 1015 |
| 147735 | 70564 | 70575 | GGAGAAGCGCAG | 1-10-1MOE | 1016 |
| 147737 | 70575 | 70586 | ACAGCCAGGTAG | 1-10-1MOE | 1067 |
| 147735 | 70710 | 70721 | GGAGAAGCGCAG | 1-10-1MOE | 1016 |
| 147737 | 70721 | 70732 | ACAGCCAGGTAG | 1-10-1MOE | 1067 |
| 404131 | 70729 | 70742 | ACCTTCGATCACAG | 2-10-2MOE | 831 |
| 368349 | 70762 | 70775 | CTGCACTGACGAGT | 2-10-2MOE | 1017 |
| 389965 | 70930 | 70941 | CTGCAACATGAT | 1-10-1MOE | 1018 |
| 368366 | 70995 | 71008 | CTGATCCTTAGAAG | 2-10-2MOE | 1019 |
| 368354 | 70999 | 71012 | TCCACTGATCCTGC | 2-10-2MOE | 1024 |
| 368375 | 71000 | 71015 | CCTTCCACTGATCCTG | 3-10-3MOE | 1020 |
| 368356 | 71001 | 71014 | CTTCCACTGATCCT | 2-10-2MOE | 1027 |
| 368376 | 71001 | 71016 | TCCTTCCACTGATCCT | 3-10-3MOE | 1028 |
| 368357 | 71002 | 71015 | CCTTCCACTGATCC | 2-10-2MOE | 1046 |
| 368377 | 71002 | 71017 | CTCCTTCCACTGATCC | 3-10-3MOE | 1030 |
| 147077 | 71003 | 71014 | CTTCCACTGATC | 1-10-1MOE | 1047 |
| 368358 | 71003 | 71016 | TCCTTCCACTGATC | 2-10-2MOE | 1031 |
| 368378 | 71003 | 71018 | GCTCCTTCCACTGATC | 3-10-3MOE | 1032 |
| 147078 | 71004 | 71015 | CCTTCCACTGAT | 1-10-1MOE | 1044 |
| 368359 | 71005 | 71018 | GCTCCTTCCACTGA | 2-10-2MOE | 1033 |
| 368379 | 71005 | 71020 | AAGCTCCTTCCACTGA | 3-10-3MOE | 1034 |
| 147080 | 71006 | 71017 | CTCCTTCCACTG | 1-10-1MOE | 1021 |
| 147082 | 71008 | 71019 | AGCTCCTTCCAC | 1-10-1MOE | 1036 |
| 401413 | 71019 | 71032 | TGCAGCCATGTACT | 2-10-2MOE | 1022 |
| 147738 | 71067 | 71078 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 147739 | 71071 | 71082 | CGTTTGGGTGGC | 1-10-1MOE | 1023 |
| 147741 | 71129 | 71140 | CACCCACTGGTG | 1-10-1MOE | 1055 |
| 368354 | 71145 | 71158 | TCCACTGATCCTGC | 2-10-2MOE | 1024 |
| 368355 | 71146 | 71159 | TTCCACTGATCCTG | 2-10-2MOE | 1025 |
| 147075 | 71147 | 71158 | TCCACTGATCCT | 1-10-1MOE | 1026 |
| 368356 | 71147 | 71160 | CTTCCACTGATCCT | 2-10-2MOE | 1027 |
| 368376 | 71147 | 71162 | TCCTTCCACTGATCCT | 3-10-3MOE | 1028 |
| 147076 | 71148 | 71159 | TTCCACTGATCC | 1-10-1MOE | 1029 |
| 368357 | 71148 | 71161 | CCTTCCACTGATCC | 2-10-2MOE | 1046 |
| 368377 | 71148 | 71163 | CTCCTTCCACTGATCC | 3-10-3MOE | 1030 |
| 147077 | 71149 | 71160 | CTTCCACTGATC | 1-10-1MOE | 1047 |
| 368358 | 71149 | 71162 | TCCTTCCACTGATC | 2-10-2MOE | 1031 |
| 368378 | 71149 | 71164 | GCTCCTTCCACTGATC | 3-10-3MOE | 1032 |
| 147078 | 71150 | 71161 | CCTTCCACTGAT | 1-10-1MOE | 1044 |
| 368359 | 71151 | 71164 | GCTCCTTCCACTGA | 2-10-2MOE | 1033 |
| 368379 | 71151 | 71166 | AAGCTCCTTCCACTGA | 3-10-3MOE | 1034 |
| 368360 | 71153 | 71166 | AAGCTCCTTCCACT | 2-10-2MOE | 1035 |
| 147082 | 71154 | 71165 | AGCTCCTTCCAC | 1-10-1MOE | 1036 |
| 368381 | 71155 | 71170 | GGGAAAGCTCCTTCCA | 3-10-3MOE | 1037 |
| 390030 | 71986 | 71997 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 390030 | 72132 | 72143 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147711 | 72300 | 72311 | AAGGGCCCTGGG | 1-10-1MOE | 1040 |
| 401414 | 72347 | 72360 | TTGCAATGTCTGGC | 2-10-2MOE | 1038 |
| 147741 | 72400 | 72411 | CACCCACTGGTG | 1-10-1MOE | 1055 |
| 401415 | 72415 | 72428 | GATTTATCTGGCTG | 2-10-2MOE | 1039 |
| 147711 | 72446 | 72457 | AAGGGCCCTGGG | 1-10-1MOE | 1040 |
| 147742 | 72575 | 72586 | AACTTCAGTGTC | 1-10-1MOE | 1041 |
| 147743 | 72690 | 72701 | AGGGCTTCCAGT | 1-10-1MOE | 1042 |
| 147744 | 72694 | 72705 | AGGAAGGGCTTC | 1-10-1MOE | 1043 |
| 147745 | 72700 | 72711 | TTGACCAGGAAG | 1-10-1MOE | 1058 |
| 147742 | 72721 | 72732 | AACTTCAGTGTC | 1-10-1MOE | 1041 |
| 147743 | 72836 | 72847 | AGGGCTTCCAGT | 1-10-1MOE | 1042 |
| 147744 | 72840 | 72851 | AGGAAGGGCTTC | 1-10-1MOE | 1043 |
| 368357 | 72898 | 72911 | CCTTCCACTGATCC | 2-10-2MOE | 1046 |
| 147078 | 72900 | 72911 | CCTTCCACTGAT | 1-10-1MOE | 1044 |
| 398157 | 72903 | 72916 | GGAAACATACCCTG | 2-10-2MOE | 1045 |
| 368357 | 73044 | 73057 | CCTTCCACTGATCC | 2-10-2MOE | 1046 |
| 147077 | 73045 | 73056 | CTTCCACTGATC | 1-10-1MOE | 1047 |
| 147746 | 73052 | 73063 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 73101 | 73112 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398160 | 73139 | 73152 | GAATAGGTTAAGGC | 2-10-2MOE | 1048 |
| 147746 | 73198 | 73209 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398161 | 73238 | 73251 | AACAATGTGTTGTA | 2-10-2MOE | 1049 |
| 147088 | 73419 | 73430 | CCCTCTACACCA | 1-10-1MOE | 1050 |
| 404140 | 73457 | 73470 | GCACACAGCTGAGG | 2-10-2MOE | 1051 |
| 404139 | 73459 | 73472 | GTGCACACAGCTGA | 2-10-2MOE | 1052 |
| 399301 | 73461 | 73474 | GTGTGCACACAGCT | 2-10-2MOE | 1542 |
| 404137 | 73463 | 73476 | CAGTGTGCACACAG | 2-10-2MOE | 1053 |
| 404138 | 73465 | 73478 | CTCAGTGTGCACAC | 2-10-2MOE | 1054 |
| 147741 | 73705 | 73716 | CACCCACTGGTG | 1-10-1MOE | 1055 |
| 404135 | 73858 | 73871 | CATTTCCATGGCCA | 2-10-2MOE | 1056 |
| 398167 | 74008 | 74019 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 398092 | 74009 | 74022 | AGTCAGGCCATGTG | 2-10-2MOE | 1060 |
| 398162 | 74114 | 74127 | ACCAAACAGTTCAG | 2-10-2MOE | 1057 |
| 147745 | 74137 | 74148 | TTGACCAGGAAG | 1-10-1MOE | 1058 |
| 398167 | 74154 | 74165 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 398092 | 74155 | 74168 | AGTCAGGCCATGTG | 2-10-2MOE | 1060 |
| 389949 | 74310 | 74321 | GCGCGAGCCCGA | 1-10-1MOE | 1061 |
| 147740 | 74485 | 74496 | TGTGAGGCTCCA | 1-10-1MOE | 1062 |
| 389950 | 74527 | 74538 | CCCTGAAGGTTC | 1-10-1MOE | 1063 |
| 398101 | 74656 | 74669 | TTTGATAAAGCCCT | 2-10-2MOE | 1064 |
| 398104 | 74805 | 74818 | CAAGAAGACCTTAC | 2-10-2MOE | 1065 |
| 147737 | 74893 | 74904 | ACAGCCAGGTAG | 1-10-1MOE | 1067 |
| 398105 | 74894 | 74907 | TGCACAGGCAGGTT | 2-10-2MOE | 1066 |
| 147737 | 74919 | 74930 | ACAGCCAGGTAG | 1-10-1MOE | 1067 |
| 398106 | 74974 | 74987 | TGGAAAACTGCACC | 2-10-2MOE | 1068 |
| 404199 | 75045 | 75058 | GGTCATGCACAGGC | 2-10-2MOE | 867 |
| 404134 | 75048 | 75061 | TCAGGTCATGCACA | 2-10-2MOE | 873 |
| 398106 | 75120 | 75133 | TGGAAAACTGCACC | 2-10-2MOE | 1068 |
| 147738 | 75155 | 75166 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 404132 | 75227 | 75240 | CCTTGGAATGTCTG | 2-10-2MOE | 852 |
| 147738 | 75301 | 75312 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 398166 | 75499 | 75510 | GGGCTTCTTCCA | 1-10-1MOE | 1070 |
| 147746 | 75617 | 75628 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147706 | 75686 | 75697 | GCTGACATCTCG | 1-10-1MOE | 1071 |
| 398112 | 75730 | 75743 | CAGCCTGGCACCTA | 2-10-2MOE | 1072 |
| 147746 | 75763 | 75774 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398115 | 75786 | 75799 | AGTAAATATTGGCT | 2-10-2MOE | 1076 |
| 390030 | 75839 | 75850 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 398114 | 75916 | 75929 | AGGCATATAGCAGA | 2-10-2MOE | 1075 |
| 398115 | 75932 | 75945 | AGTAAATATTGGCT | 2-10-2MOE | 1076 |
| 404133 | 75968 | 75981 | TATTCCATGGCCAT | 2-10-2MOE | 872 |
| 147715 | 77045 | 77056 | GTTGAGCATGAC | 1-10-1MOE | 1077 |
| 147715 | 77190 | 77201 | GTTGAGCATGAC | 1-10-1MOE | 1077 |
| 147693 | 77385 | 77396 | GTGCGCTCCCAT | 1-10-1MOE | 1078 |
| 398173 | 40201 | 40212 | CAGCCTGGGCAC | 1-10-1MOE | 1543 |
| 398173 | 72764 | 72775 | CA GCCTGGGCA C | 1-10-1MOE | 1543 |
| 399096 | 1986 | 1999 | TGCTCGAACTCCTT | 2-10-2MOE | 1544 |
| 399102 | 52822 | 52835 | GAAGTCACTGGCTT | 2-10-2MOE | 1545 |
| 399103 | 52824 | 52837 | GGGAAGTCACTGGC | 2-10-2MOE | 1546 |
| 399113 | 59827 | 59840 | GTTAGGCAAAGGGC | 2-10-2MOE | 1547 |
| 399132 | 69977 | 69990 | GGGCTGAGTGACCC | 2-10-2MOE | 1548 |
| 399173 | 74592 | 74605 | ATGCTAGTGCACTA | 2-10-2MOE | 1549 |
| 399208 | 75900 | 75913 | AGCTCGCTACCTCT | 2-10-2MOE | 1550 |
| 399276 | 27559 | 27572 | GAGGTATCCCATCT | 2-10-2MOE | 1551 |
| 399315 | 74039 | 74052 | GGCAACTTCAACCT | 2-10-2MOE | 1552 |
Table 19: targeting SEQ ID NO:12 and have the short antisense compounds of 1 or 2 mispairing
| ISISNO. | 5 ' target site | 3 ' target site | Sequence (5 '-3 ') | The Gapmer die body | SeqID NO |
| 398163 | 20 | 31 | ATGTCAACCGGC | 1-10-1MOE | 908 |
| 384545 | 23 | 34 | CAAGTAGGATGT | 1-10-1MOE | 951 |
| 147733 | 26 | 37 | TTCTTGATGTCC | 1-10-1MOE | 891 |
| 147721 | 59 | 70 | AATGCAGGATCT | 1-10-1MOE | 1118 |
| 147700 | 110 | 121 | GCGCTAGGCCGC | 1-10-1MOE | 1110 |
| 384545 | 130 | 141 | CAAGTAGGATGT | 1-10-1MOE | 951 |
| 147705 | 159 | 170 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 147701 | 167 | 178 | CCATGGCGGGAC | 1-10-1MOE | 921 |
| 398164 | 198 | 209 | TTGTCGATCTGC | 1-10-1MOE | 1014 |
| 147730 | 199 | 210 | CTTGTCCATCAG | 1-10-1MOE | 1121 |
| 147702 | 226 | 237 | CTGGTAAATAGC | 1-10-1MOE | 898 |
| 147703 | 245 | 256 | TGGCTTCATGTC | 1-10-1MOE | 971 |
| 147705 | 266 | 277 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 398165 | 283 | 294 | GTTCTTAGGAAG | 1-10-1MOE | 968 |
| 147704 | 285 | 296 | TTGTTCTTAGGA | 1-10-1MOE | 1012 |
| 147705 | 291 | 302 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 147709 | 311 | 322 | CCATTTTTATCA | 1-10-1MOE | 978 |
| 147733 | 349 | 360 | TTCTTGATGTCC | 1-10-1MOE | 891 |
| 147707 | 360 | 371 | TAGTCATTATCT | 1-10-1MOE | 977 |
| 147708 | 366 | 377 | TTGATATAGTCA | 1-10-1MOE | 997 |
| 390030 | 381 | 392 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147709 | 386 | 397 | CCATTTTTATCA | 1-10-1MOE | 978 |
| 147081 | 393 | 404 | GCTCCTTCCACT | 1-10-1MOE | 1006 |
| 398091 | 393 | 406 | GGGCTTCTTCCATT | 2-10-2MOE | 979 |
| 398166 | 395 | 406 | GGGCTTCTTCCA | 1-10-1MOE | 1070 |
| 147712 | 461 | 472 | ACACCATCTCCC | 1-10-1MOE | 1005 |
| 147713 | 466 | 477 | CTCCCACACCAT | 1-10-1MOE | 985 |
| 147714 | 471 | 482 | TTCTGCTCCCAC | 1-10-1MOE | 986 |
| 147710 | 502 | 513 | TATAGCTCCTCT | 1-10-1MOE | 994 |
| 147736 | 551 | 562 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147717 | 574 | 585 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147717 | 607 | 618 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147710 | 609 | 620 | TATAGCTCCTCT | 1-10-1MOE | 994 |
| 147708 | 612 | 623 | TTGATATAGTCA | 1-10-1MOE | 997 |
| 147718 | 621 | 632 | TAATATGACTTG | 1-10-1MOE | 998 |
| 147746 | 625 | 636 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147736 | 658 | 669 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147720 | 676 | 687 | GATCTCTCGAGT | 1-10-1MOE | 1117 |
| 147721 | 683 | 694 | AATGCAGGATCT | 1-10-1MOE | 1118 |
| 398167 | 704 | 715 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 398092 | 705 | 718 | AGTCAGGCCATGTG | 2-10-2MOE | 1060 |
| 147722 | 709 | 720 | AAAGTCAGGCCA | 1-10-1MOE | 1130 |
| 147723 | 715 | 726 | GACTCCAAAGTC | 1-10-1MOE | 892 |
| 147746 | 733 | 744 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398093 | 758 | 771 | TCGGACTTTGAAAA | 2-10-2MOE | 1009 |
| 398168 | 760 | 771 | TCGGACTTTGAA | 1-10-1MOE | 1008 |
| 147725 | 761 | 772 | CTCGGACTTTGA | 1-10-1MOE | 1119 |
| 147726 | 766 | 777 | TGACTCTCGGAC | 1-10-1MOE | 1120 |
| 147738 | 780 | 791 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 147727 | 807 | 818 | CAGTGGACCACA | 1-10-1MOE | 1128 |
| 147728 | 846 | 857 | GCCAGACAGAAG | 1-10-1MOE | 1013 |
| 398094 | 848 | 861 | ATCAGCCAGACAGA | 2-10-2MOE | 1010 |
| 398169 | 849 | 860 | TCAGCCAGACAG | 1-10-1MOE | 909 |
| 147729 | 863 | 874 | GTAAGAGGCAGG | 1-10-1MOE | 920 |
| 398095 | 866 | 879 | CATCAGCAAGAGGC | 2-10-2MOE | 1011 |
| 398164 | 873 | 884 | TTGTCGATCTGC | 1-10-1MOE | 1014 |
| 147730 | 874 | 885 | CTTGTCCATCAG | 1-10-1MOE | 1121 |
| 147731 | 880 | 891 | TTTCCTCTTGTC | 1-10-1MOE | 934 |
| 147732 | 885 | 896 | GGGTCTTTCCTC | 1-10-1MOE | 1122 |
| 147738 | 888 | 899 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 147733 | 906 | 917 | TTCTTGATGTCC | 1-10-1MOE | 891 |
| 398096 | 971 | 984 | GGAGAAGCGCAGCT | 2-10-2MOE | 1015 |
| 147735 | 973 | 984 | GGAGAAGCGCAG | 1-10-1MOE | 1016 |
| 147736 | 978 | 989 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147729 | 979 | 990 | GTAAGAGGCAGG | 1-10-1MOE | 920 |
| 147737 | 984 | 995 | ACAGCCAGGTAG | 1-10-1MOE | 1067 |
| 368349 | 1025 | 1038 | CTGCACTGACGAGT | 2-10-2MOE | 1017 |
| 368369 | 1025 | 1040 | TCCTGCACTGACGAGT | 3-10-3MOE | 893 |
| 368350 | 1027 | 1040 | TCCTGCACTGACGA | 2-10-2MOE | 1079 |
| 368370 | 1027 | 1042 | GATCCTGCACTGACGA | 3-10-3MOE | 1080 |
| 368351 | 1029 | 1042 | GATCCTGCACTGAC | 2-10-2MOE | 1081 |
| 368371 | 1029 | 1044 | CTGATCCTGCACTGAC | 3-10-3MOE | 1082 |
| 368352 | 1031 | 1044 | CTGATCCTGCACTG | 2-10-2MOE | 1105 |
| 368372 | 1031 | 1046 | CACTGATCCTGCACTG | 3-10-3MOE | 894 |
| 368353 | 1033 | 1046 | CACTGATCCTGCAC | 2-10-2MOE | 1007 |
| 368373 | 1033 | 1048 | TCCACTGATCCTGCAC | 3-10-3MOE | 1083 |
| 368354 | 1035 | 1048 | TCCACTGATCCTGC | 2-10-2MOE | 1024 |
| 368368 | 1035 | 1048 | TCCACTGATCCTTA | 2-10-2MOE | 1127 |
| 368374 | 1035 | 1050 | CTTCCACTGATCCTGC | 3-10-3MOE | 1126 |
| 368388 | 1035 | 1050 | CTTCCACTGATCCTTA | 3-10-3MOE | 895 |
| 147074 | 1036 | 1047 | CCACTGATCCTG | 1-10-1MOE | 845 |
| 368355 | 1036 | 1049 | TTCCACTGATCCTG | 2-10-2MOE | 1025 |
| 368375 | 1036 | 1051 | CCTTCCACTGATCCTG | 3-10-3MOE | 1020 |
| 147075 | 1037 | 1048 | TCCACTGATCCT | 1-10-1MOE | 1026 |
| 368356 | 1037 | 1050 | CTTCCACTGATCCT | 2-10-2MOE | 1027 |
| 368376 | 1037 | 1052 | TCCTTCCACTGATCCT | 3-10-3MOE | 1028 |
| 147076 | 1038 | 1049 | TTCCACTGATCC | 1-10-1MOE | 1029 |
| 368357 | 1038 | 1051 | CCTTCCACTGATCC | 2-10-2MOE | 1046 |
| 368377 | 1038 | 1053 | CTCCTTCCA CTGATCC | 3-10-3MOE | 1030 |
| 147077 | 1039 | 1050 | CTTCCACTGATC | 1-10-1MOE | 1047 |
| 368358 | 1039 | 1052 | TCCTTCCACTGATC | 2-10-2MOE | 1031 |
| 368378 | 1039 | 1054 | GCTCCTTCCACTGATC | 3-10-3MOE | 1032 |
| 147078 | 1040 | 1051 | CCTTCCACTGAT | 1-10-1MOE | 1044 |
| 147079 | 1041 | 1052 | TCCTTCCACTGA | 1-10-1MOE | 1001 |
| 368359 | 1041 | 1054 | GCTCCTTCCACTGA | 2-10-2MOE | 1033 |
| 368379 | 1041 | 1056 | AAGCTCCTTCCACTGA | 3-10-3MOE | 1034 |
| 147080 | 1042 | 1053 | CTCCTTCCACTG | 1-10-1MOE | 1021 |
| 147081 | 1043 | 1054 | GCTCCTTCCACT | 1-10-1MOE | 1006 |
| 368360 | 1043 | 1056 | AAGCTCCTTCCACT | 2-10-2MOE | 1035 |
| 368380 | 1043 | 1058 | GAAAGCTCCTTCCACT | 3-10-3MOE | 896 |
| 147082 | 1044 | 1055 | AGCTCCTTCCAC | 1-10-1MOE | 1036 |
| 368361 | 1045 | 1058 | GAAAGCTCCTTCCA | 2-10-2MOE | 962 |
| 368381 | 1045 | 1060 | GGGAAAGCTCCTTCCA | 3-10-3MOE | 1037 |
| 147729 | 1087 | 1098 | GTAAGAGGCAGG | 1-10-1MOE | 920 |
| 147738 | 1103 | 1114 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 147739 | 1107 | 1118 | CGTTTGGGTGGC | 1-10-1MOE | 1023 |
| 147740 | 1124 | 1135 | TGTGAGGCTCCA | 1-10-1MOE | 1062 |
| 398117 | 1164 | 1177 | TTTCCACTTGGGTG | 2-10-2MOE | 960 |
| 147741 | 1165 | 1176 | CACCCACTGGTG | 1-10-1MOE | 1055 |
| 398097 | 1194 | 1207 | GGCAGTCTTTATCC | 2-10-2MOE | 897 |
| 398098 | 1272 | 1285 | TAACTTCAGTGTCT | 2-10-2MOE | 1131 |
| 398117 | 1272 | 1285 | TTTCCACTTGGGTG | 2-10-2MOE | 960 |
| 147742 | 1273 | 1284 | AACTTCAGTGTC | 1-10-1MOE | 1041 |
| 147698 | 1293 | 1304 | CCCGCCACCACC | 1-10-1MOE | 928 |
| 147743 | 1388 | 1399 | AGGGCTTCCAGT | 1-10-1MOE | 1042 |
| 398099 | 1388 | 1401 | GAAGGGCTTCCAGT | 2-10-2MOE | 1132 |
| 147744 | 1392 | 1403 | AGGAAGGGCTTC | 1-10-1MOE | 1043 |
| 398100 | 1395 | 1408 | TGACCAGGAAGGGC | 2-10-2MOE | 1133 |
| 147745 | 1398 | 1409 | TTGACCAGGAAG | 1-10-1MOE | 1058 |
| 398157 | 1455 | 1468 | GGAAACATACCCTG | 2-10-2MOE | 1045 |
| 147745 | 1458 | 1469 | TTGACCAGGAAG | 1-10-1MOE | 1058 |
| 398167 | 1475 | 1486 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 398118 | 1564 | 1577 | CGCGAGATATCTAA | 2-10-2MOE | 1084 |
| 147697 | 1575 | 1586 | CCCCAGCAGCGG | 1-10-1MOE | 1000 |
| 147076 | 1596 | 1607 | TTCCACTGATCC | 1-10-1MOE | 1029 |
| 368357 | 1596 | 1609 | CCTTCCACTGATCC | 2-10-2MOE | 1046 |
| 147077 | 1597 | 1608 | CTTCCACTGATC | 1-10-1MOE | 1047 |
| 147078 | 1598 | 1609 | CCTTCCACTGAT | 1-10-1MOE | 1044 |
| 398118 | 1672 | 1685 | CGCGAGATATCTAA | 2-10-2MOE | 1084 |
| 398158 | 1681 | 1694 | AGGCCCTGAGATTA | 2-10-2MOE | 1134 |
| 147697 | 1683 | 1694 | CCCCAGCAGCGG | 1-10-1MOE | 1000 |
| 398159 | 1686 | 1699 | GGTTAAGGCCCTGA | 2-10-2MOE | 1135 |
| 398160 | 1691 | 1704 | GAATAGGTTAAGGC | 2-10-2MOE | 1048 |
| 398163 | 1711 | 1722 | ATGTCAACCGGC | 1-10-1MOE | 908 |
| 147733 | 1717 | 1728 | TTCTTGATGTCC | 1-10-1MOE | 891 |
| 147089 | 1747 | 1758 | TCCCTCTACACC | 1-10-1MOE | 956 |
| 147090 | 1748 | 1759 | TTCCCTCTACAC | 1-10-1MOE | 955 |
| 147746 | 1750 | 1761 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 389949 | 1777 | 1788 | GCGCGAGCCCGA | 1-10-1MOE | 1061 |
| 398161 | 1790 | 1803 | AACAATGTGTTGTA | 2-10-2MOE | 1049 |
| 147746 | 1799 | 1810 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147700 | 1801 | 1812 | GCGCTAGGCCGC | 1-10-1MOE | 1110 |
| 147740 | 1806 | 1817 | TGTGAGGCTCCA | 1-10-1MOE | 1062 |
| 398163 | 1819 | 1830 | ATGTCAACCGGC | 1-10-1MOE | 908 |
| 147733 | 1825 | 1836 | TTCTTGATGTCC | 1-10-1MOE | 891 |
| 389950 | 1848 | 1859 | CCCTGAAGGTTC | 1-10-1MOE | 1063 |
| 147701 | 1858 | 1869 | CCATGGCGGGAC | 1-10-1MOE | 921 |
| 398164 | 1889 | 1900 | TTGTCGATCTGC | 1-10-1MOE | 1014 |
| 147730 | 1890 | 1901 | CTTGTCCATCAG | 1-10-1MOE | 1121 |
| 147700 | 1909 | 1920 | GCGCTAGGCCGC | 1-10-1MOE | 1110 |
| 398119 | 1920 | 1933 | CGCACCTGGTAAAT | 2-10-2MOE | 1085 |
| 147685 | 1957 | 1968 | GGCTGACATTCA | 1-10-1MOE | 975 |
| 147701 | 1966 | 1977 | CCATGGCGGGAC | 1-10-1MOE | 921 |
| 398120 | 1966 | 1979 | GTTCAAGCGGCCTA | 2-10-2MOE | 1086 |
| 398101 | 1977 | 1990 | TTTGATAAAGCCCT | 2-10-2MOE | 1064 |
| 398164 | 1997 | 2008 | TTGTCGATCTGC | 1-10-1MOE | 1014 |
| 147730 | 1998 | 2009 | CTTGTCCATCAG | 1-10-1MOE | 1121 |
| 147702 | 2025 | 2036 | CTGGTAAATAGC | 1-10-1MOE | 898 |
| 398119 | 2028 | 2041 | CGCACCTGGTAAAT | 2-10-2MOE | 1085 |
| 398120 | 2074 | 2087 | GTTCAAGCGGCCTA | 2-10-2MOE | 1086 |
| 398105 | 2099 | 2112 | TGCACAGGCAGGTT | 2-10-2MOE | 1066 |
| 147736 | 2204 | 2215 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147741 | 2257 | 2268 | CACCCACTGGTG | 1-10-1MOE | 1055 |
| 398104 | 2272 | 2285 | CAAGAAGACCTTAC | 2-10-2MOE | 1065 |
| 147737 | 2360 | 2371 | ACAGCCAGGTAG | 1-10-1MOE | 1067 |
| 398105 | 2361 | 2374 | TGCACAGGCAGGTT | 2-10-2MOE | 1066 |
| 147737 | 2386 | 2397 | ACAGCCAGGTAG | 1-10-1MOE | 1067 |
| 398095 | 2407 | 2420 | CATCAGCAAGAGGC | 2-10-2MOE | 1011 |
| 398106 | 2441 | 2454 | TGGAAAACTGCACC | 2-10-2MOE | 1068 |
| 398107 | 2447 | 2460 | TATTCCTGGAAAAC | 2-10-2MOE | 902 |
| 398121 | 2474 | 2487 | GTGCCTAGCACAGA | 2-10-2MOE | 1097 |
| 147745 | 2497 | 2508 | TTGACCAGGAAG | 1-10-1MOE | 1058 |
| 147712 | 2499 | 2510 | ACACCATCTCCC | 1-10-1MOE | 1005 |
| 398108 | 2544 | 2557 | GGAATGTCTGAGTT | 2-10-2MOE | 1136 |
| 147691 | 2575 | 2586 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 398121 | 2582 | 2595 | GTGCCTAGCACAGA | 2-10-2MOE | 1097 |
| 147738 | 2622 | 2633 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 398162 | 2666 | 2679 | ACCAAACAGTTCAG | 2-10-2MOE | 1057 |
| 147745 | 2689 | 2700 | TTGACCAGGAAG | 1-10-1MOE | 1058 |
| 398167 | 2706 | 2717 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 398092 | 2707 | 2720 | AGTCAGGCCATGTG | 2-10-2MOE | 1060 |
| 398109 | 2714 | 2727 | CAAGAAGTGTGGTT | 2-10-2MOE | 903 |
| 398110 | 2852 | 2865 | GTTCCCTTTGCA GG | 2-10-2MOE | 952 |
| 147091 | 2854 | 2865 | GTTCCCTCTACA | 1-10-1MOE | 1004 |
| 147723 | 2924 | 2935 | GACTCCAAAGTC | 1-10-1MOE | 892 |
| 398111 | 2937 | 2950 | GTGAAAATGCTGGC | 2-10-2MOE | 904 |
| 398166 | 2966 | 2977 | GGGCTTCTTCCA | 1-10-1MOE | 1070 |
| 147089 | 2978 | 2989 | TCCCTCTACACC | 1-10-1MOE | 956 |
| 147090 | 2979 | 2990 | TTCCCTCTACAC | 1-10-1MOE | 955 |
| 147706 | 3007 | 3018 | GCTGACATCTCG | 1-10-1MOE | 1071 |
| 389949 | 3008 | 3019 | GCGCGAGCCCGA | 1-10-1MOE | 1061 |
| 147723 | 3032 | 3043 | GACTCCAAAGTC | 1-10-1MOE | 892 |
| 147740 | 3037 | 3048 | TGTGAGGCTCCA | 1-10-1MOE | 1062 |
| 398112 | 3051 | 3064 | CAGCCTGGCACCTA | 2-10-2MOE | 1072 |
| 389950 | 3079 | 3090 | CCCTGAAGGTTC | 1-10-1MOE | 1063 |
| 147746 | 3084 | 3095 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398122 | 3148 | 3161 | CCCTTTACACAAGT | 2-10-2MOE | 1087 |
| 147089 | 3151 | 3162 | TCCCTCTACACC | 1-10-1MOE | 956 |
| 147090 | 3152 | 3163 | TTCCCTCTACAC | 1-10-1MOE | 955 |
| 398113 | 3160 | 3173 | AGGAGGTTAAACCA | 2-10-2MOE | 905 |
| 147685 | 3188 | 3199 | GGCTGACATTCA | 1-10-1MOE | 975 |
| 398101 | 3208 | 3221 | TTTGATAAAGCCCT | 2-10-2MOE | 1064 |
| 398102 | 3234 | 3247 | CTACCTGAGGATTT | 2-10-2MOE | 899 |
| 398123 | 3235 | 3248 | CTCAAAATAGATTT | 2-10-2MOE | 1088 |
| 398114 | 3237 | 3250 | AGGCATATAGCAGA | 2-10-2MOE | 1075 |
| 398103 | 3241 | 3254 | CCCAGTACTACCTG | 2-10-2MOE | 900 |
| 398115 | 3253 | 3266 | AGTAAATATTGGCT | 2-10-2MOE | 1076 |
| 398122 | 3256 | 3269 | CCCTTTACACAAGT | 2-10-2MOE | 1087 |
| 147089 | 3259 | 3270 | TCCCTCTACACC | 1-10-1MOE | 956 |
| 147090 | 3260 | 3271 | TTCCCTCTACAC | 1-10-1MOE | 955 |
| 398116 | 3266 | 3279 | TAATGACCTGATGA | 2-10-2MOE | 1137 |
| 390030 | 3306 | 3317 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 398123 | 3343 | 3356 | CTCAAAATAGATTT | 2-10-2MOE | 1088 |
| 147736 | 3435 | 3446 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 398104 | 3503 | 3516 | CAAGAAGACCTTAC | 2-10-2MOE | 1065 |
| 147737 | 3591 | 3602 | ACAGCCAGGTAG | 1-10-1MOE | 1067 |
| 398105 | 3592 | 3605 | TGCACAGGCAGGTT | 2-10-2MOE | 1066 |
| 147719 | 3608 | 3619 | CCAACTCCAACT | 1-10-1MOE | 1116 |
| 147737 | 3617 | 3628 | ACAGCCAGGTAG | 1-10-1MOE | 1067 |
| 401398 | 3621 | 3634 | CAAAGTCCCTTAGC | 2-10-2MOE | 947 |
| 147079 | 3637 | 3648 | TCCTTCCACTGA | 1-10-1MOE | 1001 |
| 147080 | 3638 | 3649 | CTCCTTCCACTG | 1-10-1MOE | 1021 |
| 398095 | 3638 | 3651 | CATCAGCAAGAGGC | 2-10-2MOE | 1011 |
| 398106 | 3672 | 3685 | TGGAAAACTGCACC | 2-10-2MOE | 1068 |
| 147733 | 3687 | 3698 | TTCTTGATGTCC | 1-10-1MOE | 891 |
| 147731 | 3688 | 3699 | TTTCCTCTTGTC | 1-10-1MOE | 934 |
| 147719 | 3716 | 3727 | CCAACTCCAACT | 1-10-1MOE | 1116 |
| 147745 | 3728 | 3739 | TTGACCAGGAAG | 1-10-1MOE | 1058 |
| 147683 | 3740 | 3751 | GCTTACGATTGT | 1-10-1MOE | 922 |
| 147079 | 3745 | 3756 | TCCTTCCACTGA | 1-10-1MOE | 1001 |
| 147080 | 3746 | 3757 | CTCCTTCCACTG | 1-10-1MOE | 1021 |
| 398108 | 3775 | 3788 | GGAATGTCTGAGTT | 2-10-2MOE | 1136 |
| 147733 | 3795 | 3806 | TTCTTGATGTCC | 1-10-1MOE | 891 |
| 147731 | 3796 | 3807 | TTTCCTCTTGTC | 1-10-1MOE | 934 |
| 147691 | 3806 | 3817 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 147738 | 3853 | 3864 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 398167 | 3926 | 3937 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 147691 | 3978 | 3989 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 398167 | 4034 | 4045 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 147091 | 4085 | 4096 | GTTCCCTCTACA | 1-10-1MOE | 1004 |
| 147691 | 4086 | 4097 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 398111 | 4168 | 4181 | GTGAAAATGCTGGC | 2-10-2MOE | 904 |
| 398166 | 4197 | 4208 | GGGCTTCTTCCA | 1-10-1MOE | 1070 |
| 147091 | 4223 | 4234 | GTTCCCTCTACA | 1-10-1MOE | 1004 |
| 147092 | 4224 | 4235 | TGTTCCCTCTAC | 1-10-1MOE | 901 |
| 398112 | 4282 | 4295 | CAGCCTGGCACCTA | 2-10-2MOE | 1072 |
| 147746 | 4315 | 4326 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398113 | 4391 | 4404 | AGGAGGTTAAACCA | 2-10-2MOE | 905 |
| 147723 | 4422 | 4433 | GACTCCAAAGTC | 1-10-1MOE | 892 |
| 398114 | 4468 | 4481 | AGGCATATAGCAGA | 2-10-2MOE | 1075 |
| 398115 | 4484 | 4497 | AGTAAATATTGGCT | 2-10-2MOE | 1076 |
| 390030 | 4491 | 4502 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 398116 | 4497 | 4510 | TAATGACCTGATGA | 2-10-2MOE | 1137 |
| 147723 | 4530 | 4541 | GACTCCAAAGTC | 1-10-1MOE | 892 |
| 390030 | 4599 | 4610 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 398124 | 4761 | 4774 | CACATGAGCTATTC | 2-10-2MOE | 1089 |
| 398124 | 4869 | 4882 | CACATGAGCTATTC | 2-10-2MOE | 1089 |
| 147703 | 4926 | 4937 | TGGCTTCATGTC | 1-10-1MOE | 971 |
| 147692 | 4928 | 4939 | CTCACCTTCATG | 1-10-1MOE | 1113 |
| 147696 | 4975 | 4986 | TGGATGATTGGC | 1-10-1MOE | 906 |
| 147703 | 5034 | 5045 | TGGCTTCATGTC | 1-10-1MOE | 971 |
| 147692 | 5036 | 5047 | CTCACCTTCATG | 1-10-1MOE | 1113 |
| 147098 | 5173 | 5184 | AGTTGTTGTTCC | 1-10-1MOE | 1112 |
| 398125 | 5183 | 5196 | CAGTAAGGAATTTT | 2-10-2MOE | 913 |
| 398126 | 5216 | 5229 | GTGAAGTGAGTCAT | 2-10-2MOE | 1090 |
| 147098 | 5281 | 5292 | AGTTGTTGTTCC | 1-10-1MOE | 1112 |
| 398127 | 5283 | 5296 | GGTCACTCAAGATG | 2-10-2MOE | 1091 |
| 398126 | 5324 | 5337 | GTGAAGTGAGTCAT | 2-10-2MOE | 1090 |
| 398128 | 5335 | 5348 | CTAAATTTAGTTCA | 2-10-2MOE | 911 |
| 398127 | 5391 | 5404 | GGTCACTCAAGATG | 2-10-2MOE | 1091 |
| 398128 | 5443 | 5456 | CTAAATTTAGTTCA | 2-10-2MOE | 911 |
| 147712 | 5474 | 5485 | ACACCATCTCCC | 1-10-1MOE | 1005 |
| 147736 | 5600 | 5611 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147746 | 5606 | 5617 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398129 | 5628 | 5641 | TTTGAGGAGCTATT | 2-10-2MOE | 1106 |
| 147085 | 5654 | 5665 | TCTACACCAGGT | 1-10-1MOE | 961 |
| 147736 | 5708 | 5719 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 398129 | 5736 | 5749 | TTTGAGGAGCTATT | 2-10-2MOE | 1106 |
| 147679 | 5934 | 5945 | CAAAAGGATCCC | 1-10-1MOE | 907 |
| 147723 | 6229 | 6240 | GACTCCAAAGTC | 1-10-1MOE | 892 |
| 147723 | 6338 | 6349 | GACTCCAAAGTC | 1-10-1MOE | 892 |
| 390030 | 6803 | 6814 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 398142 | 6885 | 6898 | CCAGCACACTGGAA | 2-10-2MOE | 923 |
| 390030 | 6912 | 6923 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 398142 | 6994 | 7007 | CCAGCACACTGGAA | 2-10-2MOE | 923 |
| 147695 | 7054 | 7065 | TCATTCCCCACT | 1-10-1MOE | 984 |
| 147695 | 7163 | 7174 | TCATTCCCCACT | 1-10-1MOE | 984 |
| 398166 | 7197 | 7208 | GGGCTTCTTCCA | 1-10-1MOE | 1070 |
| 398166 | 7306 | 7317 | GGGCTTCTTCCA | 1-10-1MOE | 1070 |
| 147684 | 7442 | 7453 | ACCCAGTCAGGG | 1-10-1MOE | 964 |
| 398130 | 7694 | 7707 | TTAGTATGACAGCT | 2-10-2MOE | 925 |
| 398131 | 7711 | 7724 | GGACTCACTCAGCA | 2-10-2MOE | 1092 |
| 398130 | 7802 | 7815 | TTAGTATGACAGCT | 2-10-2MOE | 925 |
| 398125 | 7804 | 7817 | CAGTAAGGAATTTT | 2-10-2MOE | 913 |
| 398131 | 7819 | 7832 | GGACTCACTCAGCA | 2-10-2MOE | 1092 |
| 390030 | 7877 | 7888 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 398125 | 7912 | 7925 | CAGTAAGGAATTTT | 2-10-2MOE | 913 |
| 390030 | 7985 | 7996 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 398132 | 8031 | 8044 | TCAGGGCTACTCAT | 2-10-2MOE | 1093 |
| 398132 | 8139 | 8152 | TCAGGGCTACTCAT | 2-10-2MOE | 1093 |
| 147684 | 8148 | 8159 | ACCCAGTCAGGG | 1-10-1MOE | 964 |
| 147684 | 8256 | 8267 | ACCCAGTCAGGG | 1-10-1MOE | 964 |
| 398163 | 8365 | 8376 | ATGTCAACCGGC | 1-10-1MOE | 908 |
| 398166 | 8447 | 8458 | GGGCTTCTTCCA | 1-10-1MOE | 1070 |
| 398163 | 8473 | 8484 | ATGTCAACCGGC | 1-10-1MOE | 908 |
| 398166 | 8555 | 8566 | GGGCTTCTTCCA | 1-10-1MOE | 1070 |
| 147718 | 8631 | 8642 | TAATATGACTTG | 1-10-1MOE | 998 |
| 147691 | 8698 | 8709 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 147691 | 8806 | 8817 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 147728 | 8835 | 8846 | GCCAGACAGAAG | 1-10-1MOE | 1013 |
| 147727 | 8876 | 8887 | CAGTGGACCACA | 1-10-1MOE | 1128 |
| 147728 | 8943 | 8954 | GCCAGACAGAAG | 1-10-1MOE | 1013 |
| 398169 | 8946 | 8957 | TCAGCCAGACAG | 1-10-1MOE | 909 |
| 147727 | 8984 | 8995 | CAGTGGACCACA | 1-10-1MOE | 1128 |
| 147742 | 9060 | 9071 | AACTTCAGTGTC | 1-10-1MOE | 1041 |
| 398133 | 9112 | 9125 | CAGCACTAGATTCA | 2-10-2MOE | 1094 |
| 384545 | 9135 | 9146 | CAAGTAGGATGT | 1-10-1MOE | 951 |
| 147742 | 9168 | 9179 | AACTTCAGTGTC | 1-10-1MOE | 1041 |
| 398133 | 9220 | 9233 | CAGCACTAGATTCA | 2-10-2MOE | 1094 |
| 384545 | 9243 | 9254 | CAAGTAGGATGT | 1-10-1MOE | 951 |
| 398125 | 9368 | 9381 | CAGTAAGGAATTTT | 2-10-2MOE | 913 |
| 398125 | 9476 | 9489 | CAGTAAGGAATTTT | 2-10-2MOE | 913 |
| 401409 | 9516 | 9529 | ATTCTTAACACAGA | 2-10-2MOE | 991 |
| 147096 | 9594 | 9605 | TTGTTGTTCCCT | 1-10-1MOE | 1107 |
| 147733 | 9597 | 9608 | TTCTTGATGTCC | 1-10-1MOE | 891 |
| 147720 | 9689 | 9700 | GATCTCTCGAGT | 1-10-1MOE | 1117 |
| 147096 | 9702 | 9713 | TTGTTGTTCCCT | 1-10-1MOE | 1107 |
| 147733 | 9705 | 9716 | TTCTTGATGTCC | 1-10-1MOE | 891 |
| 147720 | 9797 | 9808 | GATCTCTCGAGT | 1-10-1MOE | 1117 |
| 147746 | 9963 | 9974 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 9966 | 9977 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 9969 | 9980 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 9991 | 10002 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 10071 | 10082 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 10074 | 10085 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 10077 | 10088 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 10099 | 10110 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398134 | 10153 | 10166 | TAGCTTAATGTAAC | 2-10-2MOE | 1095 |
| 147085 | 10221 | 10232 | TCTACACCAGGT | 1-10-1MOE | 961 |
| 398134 | 10261 | 10274 | TAGCTTAATGTAAC | 2-10-2MOE | 1095 |
| 390030 | 10278 | 10289 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147084 | 10328 | 10339 | CTACACCAGGTC | 1-10-1MOE | 993 |
| 147711 | 10684 | 10695 | AAGGGCCCTGGG | 1-10-1MOE | 1040 |
| 398128 | 11333 | 11346 | CTAAATTTAGTTCA | 2-10-2MOE | 911 |
| 398128 | 11340 | 11353 | CTAAATTTAGTTCA | 2-10-2MOE | 911 |
| 147730 | 11783 | 11794 | CTTGTCCATCAG | 1-10-1MOE | 1121 |
| 147731 | 11789 | 11800 | TTTCCTCTTGTC | 1-10-1MOE | 934 |
| 147730 | 11790 | 11801 | CTTGTCCATCAG | 1-10-1MOE | 1121 |
| 147731 | 11796 | 11807 | TTTCCTCTTGTC | 1-10-1MOE | 934 |
| 147707 | 11960 | 11971 | TAGTCATTATCT | 1-10-1MOE | 977 |
| 147090 | 12008 | 12019 | TTCCCTCTACAC | 1-10-1MOE | 955 |
| 147091 | 12009 | 12020 | GTTCCCTCTACA | 1-10-1MOE | 1004 |
| 147091 | 12014 | 12025 | GTTCCCTCTACA | 1-10-1MOE | 1004 |
| 398096 | 12141 | 12154 | GGAGAAGCGCAGCT | 2-10-2MOE | 1015 |
| 147735 | 12143 | 12154 | GGAGAAGCGCAG | 1-10-1MOE | 1016 |
| 398096 | 12146 | 12159 | GGAGAAGCGCAGCT | 2-10-2MOE | 1015 |
| 147735 | 12148 | 12159 | GGAGAAGCGCAG | 1-10-1MOE | 1016 |
| 398166 | 12209 | 12220 | GGGCTTCTTCCA | 1-10-1MOE | 1070 |
| 398166 | 12214 | 12225 | GGGCTTCTTCCA | 1-10-1MOE | 1070 |
| 398135 | 12303 | 12316 | GACTACATTTTACA | 2-10-2MOE | 912 |
| 147741 | 12389 | 12400 | CACCCACTGGTG | 1-10-1MOE | 1055 |
| 147741 | 12394 | 12405 | CACCCACTGGTG | 1-10-1MOE | 1055 |
| 398125 | 12431 | 12444 | CAGTAAGGAATTTT | 2-10-2MOE | 913 |
| 147714 | 12585 | 12596 | TTCTGCTCCCAC | 1-10-1MOE | 986 |
| 147718 | 12594 | 12605 | TAATATGACTTG | 1-10-1MOE | 998 |
| 398125 | 12612 | 12625 | CAGTAAGGAATTTT | 2-10-2MOE | 913 |
| 147737 | 12803 | 12814 | ACAGCCAGGTAG | 1-10-1MOE | 1067 |
| 147746 | 12876 | 12887 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147691 | 12900 | 12911 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 398136 | 12915 | 12928 | TTGTGACATCTAGG | 2-10-2MOE | 1096 |
| 147737 | 12984 | 12995 | ACAGCCAGGTAG | 1-10-1MOE | 1067 |
| 147746 | 13057 | 13068 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147691 | 13081 | 13092 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 398136 | 13096 | 13109 | TTGTGACATCTAGG | 2-10-2MOE | 1096 |
| 398138 | 13254 | 13267 | AACATCAAGCTTGA | 2-10-2MOE | 931 |
| 398138 | 13435 | 13448 | AACATCAAGCTTGA | 2-10-2MOE | 931 |
| 147691 | 13488 | 13499 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 147681 | 13659 | 13670 | ATGTCATTAAAC | 1-10-1MOE | 965 |
| 147691 | 13669 | 13680 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 389965 | 13839 | 13850 | CTGCAACATGAT | 1-10-1MOE | 1018 |
| 389764 | 13839 | 13850 | CTGCAACATGAT | 1-9-2MOE | 1018 |
| 147681 | 13840 | 13851 | ATGTCATTAAAC | 1-10-1MOE | 965 |
| 389965 | 14020 | 14031 | CTGCAACATGAT | 1-10-1MOE | 1018 |
| 389764 | 14020 | 14031 | CTGCAACATGAT | 1-9-2MOE | 1018 |
| 389948 | 14067 | 14078 | CCGTTGGACCCC | 1-10-1MOE | 915 |
| 147736 | 14123 | 14134 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 389948 | 14248 | 14259 | CCGTTGGACCCC | 1-10-1MOE | 915 |
| 147738 | 14279 | 14290 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 147736 | 14304 | 14315 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147731 | 14411 | 14422 | TTTCCTCTTGTC | 1-10-1MOE | 934 |
| 147738 | 14461 | 14472 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 147692 | 14475 | 14486 | CTCACCTTCATG | 1-10-1MOE | 1113 |
| 147731 | 14593 | 14604 | TTTCCTCTTGTC | 1-10-1MOE | 934 |
| 389950 | 14614 | 14625 | CCCTGAAGGTTC | 1-10-1MOE | 1063 |
| 147692 | 14657 | 14668 | CTCACCTTCATG | 1-10-1MOE | 1113 |
| 147717 | 14750 | 14761 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147698 | 14754 | 14765 | CCCGCCACCACC | 1-10-1MOE | 928 |
| 389950 | 14796 | 14807 | CCCTGAAGGTTC | 1-10-1MOE | 1063 |
| 398112 | 14863 | 14876 | CAGCCTGGCACCTA | 2-10-2MOE | 1072 |
| 398121 | 14875 | 14888 | GTGCCTAGCACAGA | 2-10-2MOE | 1097 |
| 147717 | 14932 | 14943 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 398112 | 15045 | 15058 | CAGCCTGGCACCTA | 2-10-2MOE | 1072 |
| 398121 | 15057 | 15070 | GTGCCTAGCACAGA | 2-10-2MOE | 1097 |
| 147730 | 15117 | 15128 | CTTGTCCATCAG | 1-10-1MOE | 1121 |
| 147730 | 15299 | 15310 | CTTGTCCATCAG | 1-10-1MOE | 1121 |
| 401407 | 15339 | 15352 | CAGCTTAGGCAGAG | 2-10-2MOE | 983 |
| 398167 | 15556 | 15567 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 147736 | 16444 | 16455 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147746 | 16510 | 16521 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147738 | 16590 | 16601 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 147736 | 16610 | 16621 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 398167 | 16631 | 16642 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 401411 | 16657 | 16670 | AGCCGCCTGAAGTG | 2-10-2MOE | 999 |
| 147746 | 16676 | 16687 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398144 | 16745 | 16758 | GACAGCTTCTATAA | 2-10-2MOE | 916 |
| 147738 | 16756 | 16767 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 398167 | 16797 | 16808 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 398144 | 16911 | 16924 | GACAGCTTCTATAA | 2-10-2MOE | 916 |
| 389965 | 17096 | 17107 | CTGCAACATGAT | 1-10-1MOE | 1018 |
| 389764 | 17096 | 17107 | CTGCAACATGAT | 1-9-2MOE | 1018 |
| 389965 | 17264 | 17275 | CTGCAACATGAT | 1-10-1MOE | 1018 |
| 389764 | 17264 | 17275 | CTGCAACATGAT | 1-9-2MOE | 1018 |
| 147709 | 17406 | 17417 | CCATTTTTATCA | 1-10-1MOE | 978 |
| 147745 | 17443 | 17454 | TTGACCAGGAAG | 1-10-1MOE | 1058 |
| 147746 | 17497 | 17508 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147720 | 17589 | 17600 | GATCTCTCGAGT | 1-10-1MOE | 1117 |
| 147745 | 17611 | 17622 | TTGACCAGGAAG | 1-10-1MOE | 1058 |
| 147695 | 17634 | 17645 | TCATTCCCCACT | 1-10-1MOE | 984 |
| 147746 | 17665 | 17676 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147088 | 17707 | 17718 | CCCTCTACACCA | 1-10-1MOE | 1050 |
| 147720 | 17757 | 17768 | GATCTCTCGAGT | 1-10-1MOE | 1117 |
| 147711 | 17808 | 17819 | AAGGGCCCTGGG | 1-10-1MOE | 1040 |
| 147711 | 17976 | 17987 | AAGGGCCCTGGG | 1-10-1MOE | 1040 |
| 398139 | 18049 | 18062 | AGTGACTGACCACA | 2-10-2MOE | 917 |
| 398139 | 18217 | 18230 | AGTGACTGACCACA | 2-10-2MOE | 917 |
| 398140 | 18596 | 18609 | GTAGCATAGAGCCT | 2-10-2MOE | 918 |
| 398140 | 18764 | 18777 | GTAGCATAGAGCCT | 2-10-2MOE | 918 |
| 398167 | 18927 | 18938 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 398167 | 19095 | 19106 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 147724 | 19147 | 19158 | GAAATTGAGGAA | 1-10-1MOE | 1139 |
| 147746 | 19207 | 19218 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147724 | 19315 | 19326 | GAAATTGAGGAA | 1-10-1MOE | 1139 |
| 147740 | 19348 | 19359 | TGTGAGGCTCCA | 1-10-1MOE | 1062 |
| 147746 | 19375 | 19386 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147729 | 19386 | 19397 | GTAAGAGGCAGG | 1-10-1MOE | 920 |
| 147701 | 19503 | 19514 | CCATGGCGGGAC | 1-10-1MOE | 921 |
| 147711 | 19508 | 19519 | AAGGGCCCTGGG | 1-10-1MOE | 1040 |
| 147740 | 19516 | 19527 | TGTGAGGCTCCA | 1-10-1MOE | 1062 |
| 147718 | 19617 | 19628 | TAATATGACTTG | 1-10-1MOE | 998 |
| 390030 | 19618 | 19629 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147679 | 19635 | 19646 | CAAAAGGATCCC | 1-10-1MOE | 907 |
| 147711 | 19676 | 19687 | AAGGGCCCTGGG | 1-10-1MOE | 1040 |
| 147694 | 19747 | 19758 | CAGCCTACCAGT | 1-10-1MOE | 1098 |
| 147718 | 19785 | 19796 | TAATATGACTTG | 1-10-1MOE | 998 |
| 390030 | 19786 | 19797 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147679 | 19803 | 19814 | CAAAAGGATCCC | 1-10-1MOE | 907 |
| 147698 | 19852 | 19863 | CCCGCCACCACC | 1-10-1MOE | 928 |
| 147694 | 19915 | 19926 | CAGCCTACCAGT | 1-10-1MOE | 1098 |
| 147704 | 20011 | 20022 | TTGTTCTTAGGA | 1-10-1MOE | 1012 |
| 147698 | 20020 | 20031 | CCCGCCACCACC | 1-10-1MOE | 928 |
| 398142 | 20485 | 20498 | CCAGCACACTGGAA | 2-10-2MOE | 923 |
| 147078 | 20514 | 20525 | CCTTCCACTGAT | 1-10-1MOE | 1044 |
| 147079 | 20515 | 20526 | TCCTTCCACTGA | 1-10-1MOE | 1001 |
| 147080 | 20516 | 20527 | CTCCTTCCACTG | 1-10-1MOE | 1021 |
| 398143 | 20561 | 20574 | GTCAGTCCCAGCTA | 2-10-2MOE | 924 |
| 389965 | 20620 | 20631 | CTGCAACATGAT | 1-10-1MOE | 1018 |
| 389764 | 20620 | 20631 | CTGCAACATGAT | 1-9-2MOE | 1018 |
| 398142 | 20653 | 20666 | CCAGCACACTGGAA | 2-10-2MOE | 923 |
| 147078 | 20682 | 20693 | CCTTCCACTGAT | 1-10-1MOE | 1044 |
| 147079 | 20683 | 20694 | TCCTTCCACTGA | 1-10-1MOE | 1001 |
| 147080 | 20684 | 20695 | CTCCTTCCACTG | 1-10-1MOE | 1021 |
| 147080 | 20704 | 20715 | CTCCTTCCACTG | 1-10-1MOE | 1021 |
| 147081 | 20705 | 20716 | GCTCCTTCCACT | 1-10-1MOE | 1006 |
| 398143 | 20729 | 20742 | GTCAGTCCCAGCTA | 2-10-2MOE | 924 |
| 389965 | 20788 | 20799 | CTGCAACATGAT | 1-10-1MOE | 1018 |
| 389764 | 20788 | 20799 | CTGCAACATGAT | 1-9-2MOE | 1018 |
| 147746 | 20870 | 20881 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147080 | 20872 | 20883 | CTCCTTCCACTG | 1-10-1MOE | 1021 |
| 147081 | 20873 | 20884 | GCTCCTTCCACT | 1-10-1MOE | 1006 |
| 147746 | 21038 | 21049 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147717 | 21080 | 21091 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147076 | 21222 | 21233 | TTCCACTGATCC | 1-10-1MOE | 1029 |
| 147076 | 21390 | 21401 | TTCCACTGATCC | 1-10-1MOE | 1029 |
| 398094 | 21441 | 21454 | ATCAGCCAGACAGA | 2-10-2MOE | 1010 |
| 147746 | 21465 | 21476 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398094 | 21609 | 21622 | ATCAGCCAGACAGA | 2-10-2MOE | 1010 |
| 398169 | 21610 | 21621 | TCAGCCAGACAG | 1-10-1MOE | 909 |
| 147746 | 21633 | 21644 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147738 | 21884 | 21895 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 147743 | 22045 | 22056 | AGGGCTTCCAGT | 1-10-1MOE | 1042 |
| 147738 | 22052 | 22063 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 147683 | 22107 | 22118 | GCTTACGATTGT | 1-10-1MOE | 922 |
| 147743 | 22213 | 22224 | AGGGCTTCCAGT | 1-10-1MOE | 1042 |
| 147681 | 22566 | 22577 | ATGTCATTAAAC | 1-10-1MOE | 965 |
| 389950 | 22619 | 22630 | CCCTGAAGGTTC | 1-10-1MOE | 1063 |
| 147681 | 22734 | 22745 | ATGTCATTAAA C | 1-10-1MOE | 965 |
| 147736 | 22759 | 22770 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 389950 | 22787 | 22798 | CCCTGAAGGTTC | 1-10-1MOE | 1063 |
| 389949 | 22794 | 22805 | GCGCGAGCCCGA | 1-10-1MOE | 1061 |
| 147736 | 22927 | 22938 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 389949 | 22962 | 22973 | GCGCGAGCCCGA | 1-10-1MOE | 1061 |
| 398144 | 22962 | 22975 | GACAGCTTCTATAA | 2-10-2MOE | 916 |
| 398142 | 23008 | 23021 | CCAGCACACTGGAA | 2-10-2MOE | 923 |
| 147727 | 23019 | 23030 | CAGTGGACCACA | 1-10-1MOE | 1128 |
| 398169 | 23064 | 23075 | TCAGCCAGACAG | 1-10-1MOE | 909 |
| 398144 | 23130 | 23143 | GACAGCTTCTATAA | 2-10-2MOE | 916 |
| 398145 | 23154 | 23167 | ACATGTCAGTAATT | 2-10-2MOE | 1099 |
| 398142 | 23176 | 23189 | CCAGCACACTGGAA | 2-10-2MOE | 923 |
| 147727 | 23187 | 23198 | CAGTGGACCACA | 1-10-1MOE | 1128 |
| 147735 | 23243 | 23254 | GGAGAAGCGCAG | 1-10-1MOE | 1016 |
| 398145 | 23322 | 23335 | ACATGTCAGTAATT | 2-10-2MOE | 1099 |
| 147735 | 23411 | 23422 | GGAGAAGCGCAG | 1-10-1MOE | 1016 |
| 398146 | 23478 | 23491 | CTCATGGACACAAA | 2-10-2MOE | 1100 |
| 398146 | 23646 | 23659 | CTCATGGACACAAA | 2-10-2MOE | 1100 |
| 398147 | 23784 | 23797 | CTACAGGACAATAC | 2-10-2MOE | 957 |
| 398114 | 23853 | 23866 | AGGCATATAGCAGA | 2-10-2MOE | 1075 |
| 398147 | 23952 | 23965 | CTACAGGACAATAC | 2-10-2MOE | 957 |
| 398114 | 24021 | 24034 | AGGCATATAGCAGA | 2-10-2MOE | 1075 |
| 147702 | 24319 | 24330 | CTGGTAAATAGC | 1-10-1MOE | 898 |
| 147702 | 24487 | 24498 | CTGGTAAATAGC | 1-10-1MOE | 898 |
| 389965 | 24543 | 24554 | CTGCAACATGAT | 1-10-1MOE | 1018 |
| 389764 | 24543 | 24554 | CTGCAACATGAT | 1-9-2MOE | 1018 |
| 147713 | 24602 | 24613 | CTCCCACACCAT | 1-10-1MOE | 985 |
| 389965 | 24711 | 24722 | CTGCAACATGAT | 1-10-1MOE | 1018 |
| 389764 | 24711 | 24722 | CTGCAACATGAT | 1-9-2MOE | 1018 |
| 147684 | 24918 | 24929 | ACCCAGTCAGGG | 1-10-1MOE | 964 |
| 147684 | 25086 | 25097 | ACCCAGTCAGGG | 1-10-1MOE | 964 |
| 398148 | 25152 | 25165 | TCATAACTATTAAG | 2-10-2MOE | 981 |
| 398144 | 25192 | 25205 | GACAGCTTCTATAA | 2-10-2MOE | 916 |
| 147746 | 25216 | 25227 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147736 | 25313 | 25324 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 398148 | 25320 | 25333 | TCATAACTATTAAG | 2-10-2MOE | 981 |
| 398143 | 25337 | 25350 | GTCAGTCCCAGCTA | 2-10-2MOE | 924 |
| 398144 | 25360 | 25373 | GACAGCTTCTATAA | 2-10-2MOE | 916 |
| 147746 | 25384 | 25395 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147691 | 25442 | 25453 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 147736 | 25481 | 25492 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 398130 | 25504 | 25517 | TTAGTATGACAGCT | 2-10-2MOE | 925 |
| 147691 | 25610 | 25621 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 147721 | 25662 | 25673 | AATGCAGGATCT | 1-10-1MOE | 1118 |
| 398130 | 25672 | 25685 | TTAGTATGACAGCT | 2-10-2MOE | 925 |
| 147688 | 25750 | 25761 | TCCCAAACAAAT | 1-10-1MOE | 990 |
| 147746 | 25810 | 25821 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147721 | 25830 | 25841 | AATGCAGGATCT | 1-10-1MOE | 1118 |
| 147688 | 25918 | 25929 | TCCCAAACAAAT | 1-10-1MOE | 990 |
| 147746 | 25978 | 25989 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 26172 | 26183 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 26340 | 26351 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398149 | 26492 | 26505 | GGAAGTTTTCAAGT | 2-10-2MOE | 1101 |
| 398150 | 26526 | 26539 | GAATCTGGAGGTAA | 2-10-2MOE | 1102 |
| 398149 | 26641 | 26654 | GGAAGTTTTCAAGT | 2-10-2MOE | 1101 |
| 398150 | 26675 | 26688 | GAATCTGGAGGTAA | 2-10-2MOE | 1102 |
| 147729 | 26712 | 26723 | GTAAGAGGCAGG | 1-10-1MOE | 920 |
| 398151 | 26718 | 26731 | TCAGTGTAGGAAGA | 2-10-2MOE | 926 |
| 147729 | 26861 | 26872 | GTAAGAGGCAGG | 1-10-1MOE | 920 |
| 398151 | 26867 | 26880 | TCAGTGTAGGAAGA | 2-10-2MOE | 926 |
| 147728 | 26917 | 26928 | GCCAGACAGAAG | 1-10-1MOE | 1013 |
| 147728 | 27066 | 27077 | GCCAGACAGAAG | 1-10-1MOE | 1013 |
| 147076 | 27258 | 27269 | TTCCACTGATCC | 1-10-1MOE | 1029 |
| 147731 | 27267 | 27278 | TTTCCTCTTGTC | 1-10-1MOE | 934 |
| 147076 | 27407 | 27418 | TTCCACTGATCC | 1-10-1MOE | 1029 |
| 147731 | 27416 | 27427 | TTTCCTCTTGTC | 1-10-1MOE | 934 |
| 398152 | 27559 | 27572 | TGAATATACAGATG | 2-10-2MOE | 927 |
| 398152 | 27708 | 27721 | TGAATATACAGATG | 2-10-2MOE | 927 |
| 147696 | 28265 | 28276 | TGGATGATTGGC | 1-10-1MOE | 906 |
| 147696 | 28414 | 28425 | TGGATGATTGGC | 1-10-1MOE | 906 |
| 147698 | 28481 | 28492 | CCCGCCACCACC | 1-10-1MOE | 928 |
| 147720 | 28662 | 28673 | GATCTCTCGAGT | 1-10-1MOE | 1117 |
| 389965 | 28714 | 28725 | CTGCAACATGAT | 1-10-1MOE | 1018 |
| 389764 | 28714 | 28725 | CTGCAACATGAT | 1-9-2MOE | 1018 |
| 389965 | 28861 | 28872 | CTGCAACATGAT | 1-10-1MOE | 1018 |
| 389764 | 28861 | 28872 | CTGCAACATGAT | 1-9-2MOE | 1018 |
| 398153 | 28980 | 28993 | ATTTCTCTTACAGG | 2-10-2MOE | 948 |
| 398153 | 29126 | 29139 | ATTTCTCTTACAGG | 2-10-2MOE | 948 |
| 147719 | 29570 | 29581 | CCAACTCCAACT | 1-10-1MOE | 1116 |
| 398154 | 29692 | 29705 | AGCCCCTTGGCCGT | 2-10-2MOE | 1103 |
| 147719 | 29715 | 29726 | CCAACTCCAACT | 1-10-1MOE | 1116 |
| 398155 | 29785 | 29798 | TGTTTTTACACAGA | 2-10-2MOE | 970 |
| 398154 | 29837 | 29850 | A GCCCCTTGGCCGT | 2-10-2MOE | 1103 |
| 401384 | 29905 | 29918 | TGAACACATCACTA | 2-10-2MOE | 933 |
| 398155 | 29930 | 29943 | TGTTTTTACACAGA | 2-10-2MOE | 970 |
| 390030 | 29945 | 29956 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 390030 | 30090 | 30101 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 398156 | 30141 | 30154 | GAATACTTCAAATC | 2-10-2MOE | 1104 |
| 398156 | 30286 | 30299 | GAATACTTCAAATC | 2-10-2MOE | 1104 |
| 389948 | 30384 | 30395 | CCGTTGGACCCC | 1-10-1MOE | 915 |
| 389948 | 30530 | 30541 | CCGTTGGACCCC | 1-10-1MOE | 915 |
| 398142 | 30591 | 30604 | CCAGCACACTGGAA | 2-10-2MOE | 923 |
| 147744 | 30654 | 30665 | AGGAAGGGCTTC | 1-10-1MOE | 1043 |
| 147093 | 30689 | 30700 | TTGTTCCCTCTA | 1-10-1MOE | 929 |
| 398142 | 30738 | 30751 | CCAGCACACTGGAA | 2-10-2MOE | 923 |
| 147744 | 30801 | 30812 | AGGAAGGGCTTC | 1-10-1MOE | 1043 |
| 398168 | 31082 | 31093 | TCGGACTTTGAA | 1-10-1MOE | 1008 |
| 147746 | 31105 | 31116 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398168 | 31230 | 31241 | TCGGACTTTGAA | 1-10-1MOE | 1008 |
| 390030 | 31329 | 31340 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147736 | 31458 | 31469 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 390030 | 31477 | 31488 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147736 | 31606 | 31617 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147698 | 31713 | 31724 | CCCGCCACCACC | 1-10-1MOE | 928 |
| 384545 | 31829 | 31840 | CAAGTAGGATGT | 1-10-1MOE | 951 |
| 147698 | 31861 | 31872 | CCCGCCACCACC | 1-10-1MOE | 928 |
| 147723 | 31941 | 31952 | GACTCCAAAGTC | 1-10-1MOE | 892 |
| 384545 | 31977 | 31988 | CAAGTAGGATGT | 1-10-1MOE | 951 |
| 147692 | 32061 | 32072 | CTCACCTTCATG | 1-10-1MOE | 1113 |
| 147723 | 32089 | 32100 | GACTCCAAAGTC | 1-10-1MOE | 892 |
| 147692 | 32209 | 32220 | CTCACCTTCATG | 1-10-1MOE | 1113 |
| 147089 | 32535 | 32546 | TCCCTCTACACC | 1-10-1MOE | 956 |
| 401396 | 32569 | 32582 | TGCAGGATGTTGAG | 2-10-2MOE | 945 |
| 147730 | 32714 | 32725 | CTTGTCCATCAG | 1-10-1MOE | 1121 |
| 398165 | 32854 | 32865 | GTTCTTAGGAAG | 1-10-1MOE | 968 |
| 147730 | 32862 | 32873 | CTTGTCCATCAG | 1-10-1MOE | 1121 |
| 389950 | 32949 | 32960 | CCCTGAAGGTTC | 1-10-1MOE | 1063 |
| 398165 | 33002 | 33013 | GTTCTTAGGAAG | 1-10-1MOE | 968 |
| 147736 | 33012 | 33023 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 368352 | 33056 | 33069 | CTGATCCTGCACTG | 2-10-2MOE | 1105 |
| 147081 | 33073 | 33084 | GCTCCTTCCACT | 1-10-1MOE | 1006 |
| 368360 | 33073 | 33086 | AAGCTCCTTCCACT | 2-10-2MOE | 1035 |
| 147082 | 33074 | 33085 | AGCTCCTTCCA C | 1-10-1MOE | 1036 |
| 389950 | 33097 | 33108 | CCCTGAAGGTTC | 1-10-1MOE | 1063 |
| 147736 | 33160 | 33171 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 368352 | 33204 | 33217 | CTGATCCTGCACTG | 2-10-2MOE | 1105 |
| 147081 | 33221 | 33232 | GCTCCTTCCACT | 1-10-1MOE | 1006 |
| 147082 | 33222 | 33233 | AGCTCCTTCCAC | 1-10-1MOE | 1036 |
| 398138 | 33244 | 33257 | AACATCAAGCTTGA | 2-10-2MOE | 931 |
| 147746 | 33250 | 33261 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398138 | 33392 | 33405 | AACATCAAGCTTGA | 2-10-2MOE | 931 |
| 147746 | 33398 | 33409 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147732 | 33652 | 33663 | GGGTCTTTCCTC | 1-10-1MOE | 1122 |
| 147724 | 33733 | 33744 | GAAATTGAGGAA | 1-10-1MOE | 1139 |
| 147732 | 33800 | 33811 | GGGTCTTTCCTC | 1-10-1MOE | 1122 |
| 147724 | 33881 | 33892 | GAAATTGAGGAA | 1-10-1MOE | 1139 |
| 147719 | 33976 | 33987 | CCAACTCCAACT | 1-10-1MOE | 1116 |
| 147746 | 34034 | 34045 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398129 | 34045 | 34058 | TTTGAGGAGCTATT | 2-10-2MOE | 1106 |
| 147719 | 34124 | 34135 | CCAACTCCAACT | 1-10-1MOE | 1116 |
| 147721 | 34156 | 34167 | AATGCAGGATCT | 1-10-1MOE | 1118 |
| 398129 | 34193 | 34206 | TTTGAGGAGCTATT | 2-10-2MOE | 1106 |
| 147721 | 34304 | 34315 | AATGCAGGATCT | 1-10-1MOE | 1118 |
| 147746 | 34606 | 34617 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398165 | 34704 | 34715 | GTTCTTAGGAAG | 1-10-1MOE | 968 |
| 147746 | 34754 | 34765 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398165 | 34852 | 34863 | GTTCTTAGGAAG | 1-10-1MOE | 968 |
| 147717 | 34893 | 34904 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147719 | 34976 | 34987 | CCAACTCCAACT | 1-10-1MOE | 1116 |
| 147092 | 34987 | 34998 | TGTTCCCTCTAC | 1-10-1MOE | 901 |
| 147719 | 35124 | 35135 | CCAACTCCAACT | 1-10-1MOE | 1116 |
| 147092 | 35135 | 35146 | TGTTCCCTCTAC | 1-10-1MOE | 901 |
| 147736 | 35248 | 35259 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147738 | 35391 | 35402 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 147736 | 35396 | 35407 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147738 | 35539 | 35550 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 147691 | 35554 | 35565 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 147691 | 35702 | 35713 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 147746 | 35814 | 35825 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147733 | 35889 | 35900 | TTCTTGATGTCC | 1-10-1MOE | 891 |
| 147733 | 35923 | 35934 | TTCTTGATGTCC | 1-10-1MOE | 891 |
| 147746 | 35962 | 35973 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147726 | 35978 | 35989 | TGACTCTCGGAC | 1-10-1MOE | 1120 |
| 147733 | 36037 | 36048 | TTCTTGATGTCC | 1-10-1MOE | 891 |
| 147733 | 36071 | 36082 | TTCTTGATGTCC | 1-10-1MOE | 891 |
| 147726 | 36126 | 36137 | TGACTCTCGGAC | 1-10-1MOE | 1120 |
| 147736 | 36359 | 36370 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147691 | 36360 | 36371 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 147736 | 36507 | 36518 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147691 | 36508 | 36519 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 147746 | 36564 | 36575 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147723 | 36575 | 36586 | GACTCCAAAGTC | 1-10-1MOE | 892 |
| 147731 | 36620 | 36631 | TTTCCTCTTGTC | 1-10-1MOE | 934 |
| 147723 | 36723 | 36734 | GACTCCAAAGTC | 1-10-1MOE | 892 |
| 147731 | 36768 | 36779 | TTTCCTCTTGTC | 1-10-1MOE | 934 |
| 398169 | 37174 | 37185 | TCAGCCAGACAG | 1-10-1MOE | 909 |
| 147688 | 37380 | 37391 | TCCCAAACAAAT | 1-10-1MOE | 990 |
| 147688 | 37528 | 37539 | TCCCAAACAAAT | 1-10-1MOE | 990 |
| 147714 | 37881 | 37892 | TTCTGCTCCCAC | 1-10-1MOE | 986 |
| 147714 | 38029 | 38040 | TTCTGCTCCCAC | 1-10-1MOE | 986 |
| 147681 | 38364 | 38375 | ATGTCATTAAAC | 1-10-1MOE | 965 |
| 147736 | 38766 | 38777 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147738 | 38909 | 38920 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 147736 | 38914 | 38925 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147738 | 39057 | 39068 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 390030 | 39249 | 39260 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 390030 | 39397 | 39408 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147717 | 39545 | 39556 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147717 | 39693 | 39704 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147746 | 39729 | 39740 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 39789 | 39800 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147691 | 39829 | 39840 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 147746 | 39877 | 39888 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147691 | 39977 | 39988 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 147727 | 39983 | 39994 | CAGTGGACCACA | 1-10-1MOE | 1128 |
| 147727 | 40131 | 40142 | CAGTGGACCACA | 1-10-1MOE | 1128 |
| 147746 | 40333 | 40344 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147719 | 40457 | 40468 | CCAACTCCAACT | 1-10-1MOE | 1116 |
| 147679 | 40467 | 40478 | CAAAAGGATCCC | 1-10-1MOE | 907 |
| 147746 | 40478 | 40489 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147741 | 40565 | 40576 | CACCCACTGGTG | 1-10-1MOE | 1055 |
| 398166 | 40589 | 40600 | GGGCTTCTTCCA | 1-10-1MOE | 1070 |
| 147719 | 40605 | 40616 | CCAACTCCAACT | 1-10-1MOE | 1116 |
| 147679 | 40615 | 40626 | CAAAAGGATCCC | 1-10-1MOE | 907 |
| 147746 | 40626 | 40637 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147735 | 40662 | 40673 | GGAGAAGCGCAG | 1-10-1MOE | 1016 |
| 147746 | 40706 | 40717 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147741 | 40713 | 40724 | CACCCACTGGTG | 1-10-1MOE | 1055 |
| 398166 | 40737 | 40748 | GGGCTTCTTCCA | 1-10-1MOE | 1070 |
| 147735 | 40810 | 40821 | GGAGAAGCGCAG | 1-10-1MOE | 1016 |
| 147746 | 40854 | 40865 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147718 | 41218 | 41229 | TAATATGACTTG | 1-10-1MOE | 998 |
| 147717 | 41221 | 41232 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147717 | 41369 | 41380 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147723 | 41627 | 41638 | GACTCCAAAGTC | 1-10-1MOE | 892 |
| 147717 | 41747 | 41758 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147723 | 41775 | 41786 | GACTCCAAAGTC | 1-10-1MOE | 892 |
| 390030 | 41908 | 41919 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 390030 | 42056 | 42067 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 398153 | 42157 | 42170 | ATTTCTCTTACAGG | 2-10-2MOE | 948 |
| 398153 | 42305 | 42318 | ATTTCTCTTACAGG | 2-10-2MOE | 948 |
| 147690 | 42423 | 42434 | TGAAGTTAATTC | 1-10-1MOE | 1138 |
| 147695 | 42521 | 42532 | TCATTCCCCACT | 1-10-1MOE | 984 |
| 147710 | 42543 | 42554 | TATAGCTCCTCT | 1-10-1MOE | 994 |
| 147690 | 42571 | 42582 | TGAAGTTAATTC | 1-10-1MOE | 1138 |
| 147695 | 42669 | 42680 | TCATTCCCCACT | 1-10-1MOE | 984 |
| 147078 | 43321 | 43332 | CCTTCCACTGAT | 1-10-1MOE | 1044 |
| 147079 | 43322 | 43333 | TCCTTCCACTGA | 1-10-1MOE | 1001 |
| 147716 | 43329 | 43340 | TTAACGAGCCTT | 1-10-1MOE | 949 |
| 147078 | 43469 | 43480 | CCTTCCACTGAT | 1-10-1MOE | 1044 |
| 147079 | 43470 | 43481 | TCCTTCCACTGA | 1-10-1MOE | 1001 |
| 147080 | 43471 | 43482 | CTCCTTCCACTG | 1-10-1MOE | 1021 |
| 398102 | 43837 | 43850 | CTACCTGAGGATTT | 2-10-2MOE | 899 |
| 147074 | 43848 | 43859 | CCACTGATCCTG | 1-10-1MOE | 845 |
| 401408 | 43871 | 43884 | CAATGAAGCACAGG | 2-10-2MOE | 989 |
| 398102 | 43985 | 43998 | CTACCTGAGGATTT | 2-10-2MOE | 899 |
| 147736 | 44137 | 44148 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147746 | 44140 | 44151 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147687 | 44206 | 44217 | CGACACGGGAAC | 1-10-1MOE | 950 |
| 147743 | 44223 | 44234 | AGGGCTTCCAGT | 1-10-1MOE | 1042 |
| 384545 | 44242 | 44253 | CAAGTAGGATGT | 1-10-1MOE | 951 |
| 147736 | 44285 | 44296 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147743 | 44371 | 44382 | AGGGCTTCCAGT | 1-10-1MOE | 1042 |
| 384545 | 44390 | 44401 | CAAGTAGGATGT | 1-10-1MOE | 951 |
| 147728 | 44589 | 44600 | GCCAGACAGAAG | 1-10-1MOE | 1013 |
| 389948 | 44628 | 44639 | CCGTTGGACCCC | 1-10-1MOE | 915 |
| 147720 | 44703 | 44714 | GATCTCTCGAGT | 1-10-1MOE | 1117 |
| 147728 | 44729 | 44740 | GCCAGACAGAAG | 1-10-1MOE | 1013 |
| 147728 | 44737 | 44748 | GCCAGACAGAAG | 1-10-1MOE | 1013 |
| 389948 | 44776 | 44787 | CCGTTGGACCCC | 1-10-1MOE | 915 |
| 147720 | 44851 | 44862 | GATCTCTCGAGT | 1-10-1MOE | 1117 |
| 398110 | 44861 | 44874 | GTTCCCTTTGCAGG | 2-10-2MOE | 952 |
| 147728 | 44877 | 44888 | GCCAGACAGAAG | 1-10-1MOE | 1013 |
| 147705 | 45092 | 45103 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 147705 | 45240 | 45251 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 147681 | 45337 | 45348 | ATGTCATTAAAC | 1-10-1MOE | 965 |
| 147681 | 45485 | 45496 | ATGTCATTAAAC | 1-10-1MOE | 965 |
| 147096 | 45660 | 45671 | TTGTTGTTCCCT | 1-10-1MOE | 1107 |
| 147096 | 45808 | 45819 | TTGTTGTTCCCT | 1-10-1MOE | 1107 |
| 368368 | 45976 | 45989 | TCCACTGATCCTTA | 2-10-2MOE | 1127 |
| 147074 | 45977 | 45988 | CCACTGATCCTG | 1-10-1MOE | 845 |
| 147075 | 45978 | 45989 | TCCACTGATCCT | 1-10-1MOE | 1026 |
| 147076 | 45979 | 45990 | TTCCACTGATCC | 1-10-1MOE | 1029 |
| 368368 | 46124 | 46137 | TCCACTGATCCTTA | 2-10-2MOE | 1127 |
| 147075 | 46126 | 46137 | TCCACTGATCCT | 1-10-1MOE | 1026 |
| 147076 | 46127 | 46138 | TTCCACTGATCC | 1-10-1MOE | 1029 |
| 147705 | 46555 | 46566 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 147714 | 46685 | 46696 | TTCTGCTCCCAC | 1-10-1MOE | 986 |
| 147705 | 46703 | 46714 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 147714 | 46833 | 46844 | TTCTGCTCCCAC | 1-10-1MOE | 986 |
| 390030 | 47007 | 47018 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147746 | 47023 | 47034 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 47171 | 47182 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147085 | 47607 | 47618 | TCTACACCAGGT | 1-10-1MOE | 961 |
| 147746 | 47609 | 47620 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147089 | 47611 | 47622 | TCCCTCTACACC | 1-10-1MOE | 956 |
| 147091 | 47613 | 47624 | GTTCCCTCTACA | 1-10-1MOE | 1004 |
| 401384 | 47689 | 47702 | TGAACACATCACTA | 2-10-2MOE | 933 |
| 147691 | 47729 | 47740 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 147085 | 47755 | 47766 | TCTACACCAGGT | 1-10-1MOE | 961 |
| 147087 | 47757 | 47768 | CCTCTACACCAG | 1-10-1MOE | 982 |
| 147090 | 47760 | 47771 | TTCCCTCTACAC | 1-10-1MOE | 955 |
| 147091 | 47761 | 47772 | GTTCCCTCTACA | 1-10-1MOE | 1004 |
| 147099 | 47770 | 47781 | GAGTTGTTGTTC | 1-10-1MOE | 1108 |
| 147100 | 47771 | 47782 | CGAGTTGTTGTT | 1-10-1MOE | 1109 |
| 390030 | 47847 | 47858 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147691 | 47877 | 47888 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 147099 | 47918 | 47929 | GAGTTGTTGTTC | 1-10-1MOE | 1108 |
| 147100 | 47919 | 47930 | CGAGTTGTTGTT | 1-10-1MOE | 1109 |
| 390030 | 47995 | 48006 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147074 | 48222 | 48233 | CCACTGATCCTG | 1-10-1MOE | 845 |
| 147731 | 48340 | 48351 | TTTCCTCTTGTC | 1-10-1MOE | 934 |
| 147691 | 48393 | 48404 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 147731 | 48488 | 48499 | TTTCCTCTTGTC | 1-10-1MOE | 934 |
| 147691 | 48541 | 48552 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 398147 | 48887 | 48900 | CTACAGGACAATAC | 2-10-2MOE | 957 |
| 398147 | 49035 | 49048 | CTACAGGACAATAC | 2-10-2MOE | 957 |
| 147074 | 49525 | 49536 | CCACTGATCCTG | 1-10-1MOE | 845 |
| 398168 | 49742 | 49753 | TCGGACTTTGAA | 1-10-1MOE | 1008 |
| 384545 | 49858 | 49869 | CAAGTAGGATGT | 1-10-1MOE | 951 |
| 398168 | 49890 | 49901 | TCGGACTTTGAA | 1-10-1MOE | 1008 |
| 147724 | 49974 | 49985 | GAAATTGAGGAA | 1-10-1MOE | 1139 |
| 384545 | 50006 | 50017 | CAAGTAGGATGT | 1-10-1MOE | 951 |
| 147689 | 50084 | 50095 | CAGAGAAGGTCT | 1-10-1MOE | 987 |
| 147687 | 50102 | 50113 | CGACACGGGAAC | 1-10-1MOE | 950 |
| 147724 | 50122 | 50133 | GAAATTGAGGAA | 1-10-1MOE | 1139 |
| 147687 | 50250 | 50261 | CGACACGGGAAC | 1-10-1MOE | 950 |
| 398117 | 50389 | 50402 | TTTCCACTTGGGTG | 2-10-2MOE | 960 |
| 147736 | 50436 | 50447 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147736 | 50582 | 50593 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 398168 | 50703 | 50714 | TCGGACTTTGAA | 1-10-1MOE | 1008 |
| 401397 | 50822 | 50835 | CTGGTCAGCATTGA | 2-10-2MOE | 946 |
| 147746 | 51019 | 51030 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147708 | 51101 | 51112 | TTGATATAGTCA | 1-10-1MOE | 997 |
| 147746 | 51165 | 51176 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 51185 | 51196 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147708 | 51247 | 51258 | TTGATATAGTCA | 1-10-1MOE | 997 |
| 147081 | 51287 | 51298 | GCTCCTTCCACT | 1-10-1MOE | 1006 |
| 147082 | 51288 | 51299 | AGCTCCTTCCAC | 1-10-1MOE | 1036 |
| 147746 | 51324 | 51335 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 51331 | 51342 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147728 | 51376 | 51387 | GCCAGACAGAAG | 1-10-1MOE | 1013 |
| 147729 | 51406 | 51417 | GTAAGAGGCAGG | 1-10-1MOE | 920 |
| 147081 | 51433 | 51444 | GCTCCTTCCACT | 1-10-1MOE | 1006 |
| 147082 | 51434 | 51445 | AGCTCCTTCCAC | 1-10-1MOE | 1036 |
| 147728 | 51492 | 51503 | GCCAGACAGAAG | 1-10-1MOE | 1013 |
| 147728 | 51522 | 51533 | GCCAGACAGAAG | 1-10-1MOE | 1013 |
| 147729 | 51552 | 51563 | GTAAGAGGCAGG | 1-10-1MOE | 920 |
| 368360 | 51633 | 51646 | AAGCTCCTTCCACT | 2-10-2MOE | 1035 |
| 147082 | 51634 | 51645 | AGCTCCTTCCAC | 1-10-1MOE | 1036 |
| 368361 | 51635 | 51648 | GAAAGCTCCTTCCA | 2-10-2MOE | 962 |
| 147728 | 51638 | 51649 | GCCAGACAGAAG | 1-10-1MOE | 1013 |
| 147695 | 51644 | 51655 | TCATTCCCCACT | 1-10-1MOE | 984 |
| 147736 | 51713 | 51724 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147684 | 51721 | 51732 | ACCCAGTCAGGG | 1-10-1MOE | 964 |
| 147081 | 51779 | 51790 | GCTCCTTCCACT | 1-10-1MOE | 1006 |
| 368360 | 51779 | 51792 | AAGCTCCTTCCACT | 2-10-2MOE | 1035 |
| 147082 | 51780 | 51791 | AGCTCCTTCCAC | 1-10-1MOE | 1036 |
| 368361 | 51781 | 51794 | GAAAGCTCCTTCCA | 2-10-2MOE | 962 |
| 147695 | 51790 | 51801 | TCATTCCCCACT | 1-10-1MOE | 984 |
| 147736 | 51859 | 51870 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147077 | 51988 | 51999 | CTTCCACTGATC | 1-10-1MOE | 1047 |
| 147079 | 51990 | 52001 | TCCTTCCACTGA | 1-10-1MOE | 1001 |
| 147746 | 52064 | 52075 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147681 | 52085 | 52096 | ATGTCATTAAAC | 1-10-1MOE | 965 |
| 147077 | 52134 | 52145 | CTTCCACTGATC | 1-10-1MOE | 1047 |
| 147079 | 52136 | 52147 | TCCTTCCACTGA | 1-10-1MOE | 1001 |
| 147691 | 52166 | 52177 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 147719 | 52252 | 52263 | CCAACTCCAACT | 1-10-1MOE | 1116 |
| 147691 | 52312 | 52323 | GA GGTGGGAAAA | 1-10-1MOE | 966 |
| 147719 | 52398 | 52409 | CCAACTCCAACT | 1-10-1MOE | 1116 |
| 147728 | 52428 | 52439 | GCCAGACAGAAG | 1-10-1MOE | 1013 |
| 147729 | 52483 | 52494 | GTAAGAGGCAGG | 1-10-1MOE | 920 |
| 398167 | 52527 | 52538 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 147682 | 52571 | 52582 | CGGGTACTATGG | 1-10-1MOE | 992 |
| 147728 | 52574 | 52585 | GCCAGACAGAAG | 1-10-1MOE | 1013 |
| 147724 | 52615 | 52626 | GAAATTGAGGAA | 1-10-1MOE | 1139 |
| 147729 | 52629 | 52640 | GTAAGAGGCAGG | 1-10-1MOE | 920 |
| 147703 | 52670 | 52681 | TGGCTTCATGTC | 1-10-1MOE | 971 |
| 398167 | 52673 | 52684 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 398165 | 52708 | 52719 | GTTCTTAGGAAG | 1-10-1MOE | 968 |
| 147704 | 52710 | 52721 | TTGTTCTTAGGA | 1-10-1MOE | 1012 |
| 147705 | 52716 | 52727 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 147724 | 52761 | 52772 | GAAATTGAGGAA | 1-10-1MOE | 1139 |
| 398167 | 52762 | 52773 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 147703 | 52816 | 52827 | TGGCTTCATGTC | 1-10-1MOE | 971 |
| 398165 | 52854 | 52865 | GTTCTTAGGAAG | 1-10-1MOE | 968 |
| 147704 | 52856 | 52867 | TTGTTCTTAGGA | 1-10-1MOE | 1012 |
| 147705 | 52862 | 52873 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 398167 | 52908 | 52919 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 147689 | 53063 | 53074 | CAGAGAAGGTCT | 1-10-1MOE | 987 |
| 147727 | 53111 | 53122 | CAGTGGACCACA | 1-10-1MOE | 1128 |
| 147727 | 53158 | 53169 | CAGTGGACCACA | 1-10-1MOE | 1128 |
| 147689 | 53209 | 53220 | CAGAGAAGGTCT | 1-10-1MOE | 987 |
| 147727 | 53257 | 53268 | CAGTGGACCACA | 1-10-1MOE | 1128 |
| 147727 | 53304 | 53315 | CAGTGGACCACA | 1-10-1MOE | 1128 |
| 147680 | 53638 | 53649 | GTATGCACTGCT | 1-10-1MOE | 988 |
| 147722 | 53650 | 53661 | AAAGTCAGGCCA | 1-10-1MOE | 1130 |
| 147083 | 53703 | 53714 | TACACCAGGTCA | 1-10-1MOE | 973 |
| 147085 | 53705 | 53716 | TCTACACCAGGT | 1-10-1MOE | 961 |
| 147086 | 53706 | 53717 | CTCTACACCAGG | 1-10-1MOE | 969 |
| 398167 | 53724 | 53735 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 147684 | 53747 | 53758 | ACCCAGTCAGGG | 1-10-1MOE | 964 |
| 147680 | 53784 | 53795 | GTATGCACTGCT | 1-10-1MOE | 988 |
| 147722 | 53796 | 53807 | AAAGTCAGGCCA | 1-10-1MOE | 1130 |
| 147085 | 53851 | 53862 | TCTACACCAGGT | 1-10-1MOE | 961 |
| 398167 | 53870 | 53881 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 147684 | 53893 | 53904 | ACCCAGTCAGGG | 1-10-1MOE | 964 |
| 398155 | 54026 | 54039 | TGTTTTTACACAGA | 2-10-2MOE | 970 |
| 147703 | 54137 | 54148 | TGGCTTCATGTC | 1-10-1MOE | 971 |
| 398155 | 54172 | 54185 | TGTTTTTACACAGA | 2-10-2MOE | 970 |
| 147705 | 54275 | 54286 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 147703 | 54283 | 54294 | TGGCTTCATGTC | 1-10-1MOE | 971 |
| 147705 | 54421 | 54432 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 147727 | 54853 | 54864 | CAGTGGACCACA | 1-10-1MOE | 1128 |
| 398165 | 54963 | 54974 | GTTCTTAGGAAG | 1-10-1MOE | 968 |
| 398090 | 54963 | 54976 | TTGTTCTTAGGAAG | 2-10-2MOE | 972 |
| 147704 | 54965 | 54976 | TTGTTCTTAGGA | 1-10-1MOE | 1012 |
| 147705 | 54971 | 54982 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 147727 | 54999 | 55010 | CAGTGGACCACA | 1-10-1MOE | 1128 |
| 398165 | 55109 | 55120 | GTTCTTAGGAAG | 1-10-1MOE | 968 |
| 147704 | 55111 | 55122 | TTGTTCTTAGGA | 1-10-1MOE | 1012 |
| 147705 | 55117 | 55128 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 147083 | 55352 | 55363 | TACACCAGGTCA | 1-10-1MOE | 973 |
| 147705 | 55378 | 55389 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 147705 | 55524 | 55535 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 147712 | 55819 | 55830 | ACACCATCTCCC | 1-10-1MOE | 1005 |
| 147712 | 55965 | 55976 | ACACCATCTCCC | 1-10-1MOE | 1005 |
| 147733 | 56289 | 56300 | TTCTTGATGTCC | 1-10-1MOE | 891 |
| 147707 | 56300 | 56311 | TAGTCATTATCT | 1-10-1MOE | 977 |
| 147708 | 56306 | 56317 | TTGATATAGTCA | 1-10-1MOE | 997 |
| 390030 | 56321 | 56332 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147081 | 56333 | 56344 | GCTCCTTCCACT | 1-10-1MOE | 1006 |
| 398166 | 56335 | 56346 | GGGCTTCTTCCA | 1-10-1MOE | 1070 |
| 147733 | 56435 | 56446 | TTCTTGATGTCC | 1-10-1MOE | 891 |
| 147707 | 56446 | 56457 | TAGTCATTATCT | 1-10-1MOE | 977 |
| 147708 | 56452 | 56463 | TTGATATAGTCA | 1-10-1MOE | 997 |
| 390030 | 56467 | 56478 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147081 | 56479 | 56490 | GCTCCTTCCACT | 1-10-1MOE | 1006 |
| 398091 | 56479 | 56492 | GGGCTTCTTCCATT | 2-10-2MOE | 979 |
| 398166 | 56481 | 56492 | GGGCTTCTTCCA | 1-10-1MOE | 1070 |
| 368366 | 56518 | 56531 | CTGATCCTTAGAAG | 2-10-2MOE | 1019 |
| 147743 | 57612 | 57623 | AGGGCTTCCAGT | 1-10-1MOE | 1042 |
| 147700 | 57709 | 57720 | GCGCTAGGCCGC | 1-10-1MOE | 1110 |
| 147743 | 57758 | 57769 | AGGGCTTCCAGT | 1-10-1MOE | 1042 |
| 147700 | 57855 | 57866 | GCGCTAGGCCGC | 1-10-1MOE | 1110 |
| 398093 | 57963 | 57976 | TCGGACTTTGAAAA | 2-10-2MOE | 1009 |
| 398168 | 57965 | 57976 | TCGGACTTTGAA | 1-10-1MOE | 1008 |
| 147698 | 58105 | 58116 | CCCGCCACCACC | 1-10-1MOE | 928 |
| 398093 | 58109 | 58122 | TCGGACTTTGAAAA | 2-10-2MOE | 1009 |
| 398168 | 58111 | 58122 | TCGGACTTTGAA | 1-10-1MOE | 1008 |
| 147698 | 58251 | 58262 | CCCGCCACCACC | 1-10-1MOE | 928 |
| 147735 | 58279 | 58290 | GGAGAAGCGCAG | 1-10-1MOE | 1016 |
| 147735 | 58425 | 58436 | GGAGAAGCGCAG | 1-10-1MOE | 1016 |
| 404135 | 58946 | 58959 | CATTTCCATGGCCA | 2-10-2MOE | 1056 |
| 390030 | 59326 | 59337 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147711 | 59357 | 59368 | AAGGGCCCTGGG | 1-10-1MOE | 1040 |
| 147743 | 59382 | 59393 | AGGGCTTCCAGT | 1-10-1MOE | 1042 |
| 147711 | 59503 | 59514 | AAGGGCCCTGGG | 1-10-1MOE | 1040 |
| 147743 | 59528 | 59539 | AGGGCTTCCAGT | 1-10-1MOE | 1042 |
| 147695 | 59576 | 59587 | TCATTCCCCACT | 1-10-1MOE | 984 |
| 147713 | 59716 | 59727 | CTCCCACACCAT | 1-10-1MOE | 985 |
| 147714 | 59721 | 59732 | TTCTGCTCCCAC | 1-10-1MOE | 986 |
| 147715 | 59746 | 59757 | GTTGAGCATGAC | 1-10-1MOE | 1077 |
| 147716 | 59771 | 59782 | TTAACGAGCCTT | 1-10-1MOE | 949 |
| 147712 | 59857 | 59868 | ACACCATCTCCC | 1-10-1MOE | 1005 |
| 147714 | 59867 | 59878 | TTCTGCTCCCAC | 1-10-1MOE | 986 |
| 147715 | 59892 | 59903 | GTTGAGCATGAC | 1-10-1MOE | 1077 |
| 147716 | 59917 | 59928 | TTAA CGAGCCTT | 1-10-1MOE | 949 |
| 390030 | 59993 | 60004 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147690 | 60270 | 60281 | TGAAGTTAATTC | 1-10-1MOE | 1138 |
| 389949 | 60325 | 60336 | GCGCGAGCCCGA | 1-10-1MOE | 1061 |
| 147690 | 60416 | 60427 | TGAAGTTAATTC | 1-10-1MOE | 1138 |
| 389949 | 60471 | 60482 | GCGCGAGCCCGA | 1-10-1MOE | 1061 |
| 147746 | 60619 | 60630 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 384545 | 60676 | 60687 | CAAGTAGGATGT | 1-10-1MOE | 951 |
| 147746 | 60765 | 60776 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 384545 | 60822 | 60833 | CAAGTAGGATGT | 1-10-1MOE | 951 |
| 147689 | 60967 | 60978 | CAGAGAAGGTCT | 1-10-1MOE | 987 |
| 147689 | 61008 | 61019 | CAGAGAAGGTCT | 1-10-1MOE | 987 |
| 147689 | 61049 | 61060 | CAGAGAAGGTCT | 1-10-1MOE | 987 |
| 398105 | 61121 | 61134 | TGCACAGGCAGGTT | 2-10-2MOE | 1066 |
| 147689 | 61154 | 61165 | CAGAGAAGGTCT | 1-10-1MOE | 987 |
| 147689 | 61195 | 61206 | CAGAGAAGGTCT | 1-10-1MOE | 987 |
| 398105 | 61267 | 61280 | TGCACAGGCAGGTT | 2-10-2MOE | 1066 |
| 147692 | 61365 | 61376 | CTCACCTTCATG | 1-10-1MOE | 1113 |
| 147692 | 61511 | 61522 | CTCACCTTCATG | 1-10-1MOE | 1113 |
| 147680 | 61619 | 61630 | GTATGCACTGCT | 1-10-1MOE | 988 |
| 147078 | 61755 | 61766 | CCTTCCACTGAT | 1-10-1MOE | 1044 |
| 147079 | 61756 | 61767 | TCCTTCCACTGA | 1-10-1MOE | 1001 |
| 147080 | 61757 | 61768 | CTCCTTCCACTG | 1-10-1MOE | 1021 |
| 147078 | 61901 | 61912 | CCTTCCACTGAT | 1-10-1MOE | 1044 |
| 147079 | 61902 | 61913 | TCCTTCCACTGA | 1-10-1MOE | 1001 |
| 147080 | 61903 | 61914 | CTCCTTCCACTG | 1-10-1MOE | 1021 |
| 147088 | 62361 | 62372 | CCCTCTACACCA | 1-10-1MOE | 1050 |
| 401384 | 62573 | 62586 | TGAACACATCACTA | 2-10-2MOE | 933 |
| 147688 | 62697 | 62708 | TCCCAAACAAAT | 1-10-1MOE | 990 |
| 147746 | 63102 | 63113 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147721 | 63225 | 63236 | AATGCAGGATCT | 1-10-1MOE | 1118 |
| 147742 | 63226 | 63237 | AACTTCAGTGTC | 1-10-1MOE | 1041 |
| 147746 | 63248 | 63259 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147682 | 63337 | 63348 | CGGGTACTATGG | 1-10-1MOE | 992 |
| 147721 | 63371 | 63382 | AATGCAGGATCT | 1-10-1MOE | 1118 |
| 147742 | 63372 | 63383 | AACTTCAGTGTC | 1-10-1MOE | 1041 |
| 147688 | 63401 | 63412 | TCCCAAACAAAT | 1-10-1MOE | 990 |
| 147097 | 63449 | 63460 | GTTGTTGTTCCC | 1-10-1MOE | 1111 |
| 147098 | 63450 | 63461 | AGTTGTTGTTCC | 1-10-1MOE | 1112 |
| 401409 | 63458 | 63471 | ATTCTTAACACAGA | 2-10-2MOE | 991 |
| 147084 | 63531 | 63542 | CTACACCAGGTC | 1-10-1MOE | 993 |
| 147688 | 63547 | 63558 | TCCCAAACAAAT | 1-10-1MOE | 990 |
| 147097 | 63595 | 63606 | GTTGTTGTTCCC | 1-10-1MOE | 1111 |
| 147098 | 63596 | 63607 | AGTTGTTGTTCC | 1-10-1MOE | 1112 |
| 147721 | 64086 | 64097 | AATGCAGGATCT | 1-10-1MOE | 1118 |
| 147721 | 64232 | 64243 | AATGCAGGATCT | 1-10-1MOE | 1118 |
| 147692 | 64233 | 64244 | CTCACCTTCATG | 1-10-1MOE | 1113 |
| 147692 | 64379 | 64390 | CTCACCTTCATG | 1-10-1MOE | 1113 |
| 147729 | 64633 | 64644 | GTAAGAGGCAGG | 1-10-1MOE | 920 |
| 401403 | 64746 | 64759 | TTTCCTAGGAGGTG | 2-10-2MOE | 967 |
| 147729 | 64779 | 64790 | GTAAGAGGCAGG | 1-10-1MOE | 920 |
| 147746 | 65151 | 65162 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147746 | 65297 | 65308 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147689 | 65302 | 65313 | CAGAGAAGGTCT | 1-10-1MOE | 987 |
| 147689 | 65448 | 65459 | CAGAGAAGGTCT | 1-10-1MOE | 987 |
| 147717 | 65862 | 65873 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147717 | 65895 | 65906 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147729 | 66000 | 66011 | GTAAGAGGCAGG | 1-10-1MOE | 920 |
| 147717 | 66008 | 66019 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147717 | 66041 | 66052 | ATCTTCAGAGAT | 1-10-1MOE | 996 |
| 147708 | 66046 | 66057 | TTGATATAGTCA | 1-10-1MOE | 997 |
| 147718 | 66055 | 66066 | TAATATGACTTG | 1-10-1MOE | 998 |
| 147729 | 66146 | 66157 | GTAAGAGGCAGG | 1-10-1MOE | 920 |
| 147089 | 66236 | 66247 | TCCCTCTACACC | 1-10-1MOE | 956 |
| 368363 | 66281 | 66294 | CTTAGAAGGCAGCA | 2-10-2MOE | 1114 |
| 147727 | 66293 | 66304 | CAGTGGACCACA | 1-10-1MOE | 1128 |
| 147093 | 66319 | 66330 | TTGTTCCCTCTA | 1-10-1MOE | 929 |
| 147094 | 66320 | 66331 | GTTGTTCCCTCT | 1-10-1MOE | 1115 |
| 147089 | 66382 | 66393 | TCCCTCTACACC | 1-10-1MOE | 956 |
| 368363 | 66427 | 66440 | CTTAGAAGGCAGCA | 2-10-2MOE | 1114 |
| 147727 | 66439 | 66450 | CAGTGGACCACA | 1-10-1MOE | 1128 |
| 147719 | 66441 | 66452 | CCAACTCCAACT | 1-10-1MOE | 1116 |
| 147093 | 66465 | 66476 | TTGTTCCCTCTA | 1-10-1MOE | 929 |
| 147094 | 66466 | 66477 | GTTGTTCCCTCT | 1-10-1MOE | 1115 |
| 147075 | 66561 | 66572 | TCCACTGATCCT | 1-10-1MOE | 1026 |
| 368357 | 66562 | 66575 | CCTTCCACTGATCC | 2-10-2MOE | 1046 |
| 147076 | 66562 | 66573 | TTCCACTGATCC | 1-10-1MOE | 1029 |
| 368377 | 66562 | 66577 | CTCCTTCCACTGATCC | 3-10-3MOE | 1030 |
| 147077 | 66563 | 66574 | CTTCCACTGATC | 1-10-1MOE | 1047 |
| 368358 | 66563 | 66576 | TCCTTCCACTGATC | 2-10-2MOE | 1031 |
| 147078 | 66564 | 66575 | CCTTCCACTGAT | 1-10-1MOE | 1044 |
| 147079 | 66565 | 66576 | TCCTTCCACTGA | 1-10-1MOE | 1001 |
| 147080 | 66566 | 66577 | CTCCTTCCACTG | 1-10-1MOE | 1021 |
| 147081 | 66567 | 66578 | GCTCCTTCCACT | 1-10-1MOE | 1006 |
| 147719 | 66587 | 66598 | CCAACTCCAACT | 1-10-1MOE | 1116 |
| 147075 | 66707 | 66718 | TCCACTGATCCT | 1-10-1MOE | 1026 |
| 368377 | 66708 | 66723 | CTCCTTCCACTGATCC | 3-10-3MOE | 1030 |
| 147076 | 66708 | 66719 | TTCCACTGATCC | 1-10-1MOE | 1029 |
| 368357 | 66708 | 66721 | CCTTCCACTGATCC | 2-10-2MOE | 1046 |
| 147077 | 66709 | 66720 | CTTCCACTGATC | 1-10-1MOE | 1047 |
| 147078 | 66710 | 66721 | CCTTCCACTGAT | 1-10-1MOE | 1044 |
| 147079 | 66711 | 66722 | TCCTTCCACTGA | 1-10-1MOE | 1001 |
| 147080 | 66712 | 66723 | CTCCTTCCACTG | 1-10-1MOE | 1021 |
| 147081 | 66713 | 66724 | GCTCCTTCCACT | 1-10-1MOE | 1006 |
| 147089 | 66842 | 66853 | TCCCTCTACACC | 1-10-1MOE | 956 |
| 147089 | 66988 | 66999 | TCCCTCTACACC | 1-10-1MOE | 956 |
| 147075 | 66999 | 67010 | TCCACTGATCCT | 1-10-1MOE | 1026 |
| 147075 | 67145 | 67156 | TCCACTGATCCT | 1-10-1MOE | 1026 |
| 147705 | 67213 | 67224 | CGGTTTTTGTTC | 1-10-1MOE | 1002 |
| 401413 | 67301 | 67314 | TGCAGCCATGTACT | 2-10-2MOE | 1022 |
| 147737 | 67309 | 67320 | ACAGCCAGGTAG | 1-10-1MOE | 1067 |
| 147080 | 67430 | 67441 | CTCCTTCCACTG | 1-10-1MOE | 1021 |
| 147737 | 67455 | 67466 | ACAGCCAGGTAG | 1-10-1MOE | 1067 |
| 147080 | 67576 | 67587 | CTCCTTCCACTG | 1-10-1MOE | 1021 |
| 147082 | 67578 | 67589 | AGCTCCTTCCAC | 1-10-1MOE | 1036 |
| 147090 | 67582 | 67593 | TTCCCTCTACAC | 1-10-1MOE | 955 |
| 147091 | 67583 | 67594 | GTTCCCTCTACA | 1-10-1MOE | 1004 |
| 147742 | 67591 | 67602 | AACTTCAGTGTC | 1-10-1MOE | 1041 |
| 147090 | 67728 | 67739 | TTCCCTCTACAC | 1-10-1MOE | 955 |
| 147698 | 68036 | 68047 | CCCGCCACCACC | 1-10-1MOE | 928 |
| 147698 | 68182 | 68193 | CCCGCCACCACC | 1-10-1MOE | 928 |
| 147681 | 68267 | 68278 | ATGTCATTAAAC | 1-10-1MOE | 965 |
| 147721 | 68386 | 68397 | AATGCAGGATCT | 1-10-1MOE | 1118 |
| 147681 | 68413 | 68424 | ATGTCATTAAAC | 1-10-1MOE | 965 |
| 147712 | 68527 | 68538 | ACACCATCTCCC | 1-10-1MOE | 1005 |
| 147721 | 68532 | 68543 | AATGCAGGATCT | 1-10-1MOE | 1118 |
| 147711 | 68760 | 68771 | AAGGGCCCTGGG | 1-10-1MOE | 1040 |
| 147711 | 68906 | 68917 | AAGGGCCCTGGG | 1-10-1MOE | 1040 |
| 147696 | 69045 | 69056 | TGGATGATTGGC | 1-10-1MOE | 906 |
| 147696 | 69191 | 69202 | TGGATGATTGGC | 1-10-1MOE | 906 |
| 147723 | 69194 | 69205 | GACTCCAAAGTC | 1-10-1MOE | 892 |
| 147723 | 69210 | 69221 | GACTCCAAA GTC | 1-10-1MOE | 892 |
| 389965 | 69271 | 69282 | CTGCAACATGAT | 1-10-1MOE | 1018 |
| 389764 | 69271 | 69282 | CTGCAACATGAT | 1-9-2MOE | 1018 |
| 147723 | 69340 | 69351 | GACTCCAAAGTC | 1-10-1MOE | 892 |
| 147723 | 69356 | 69367 | GACTCCAAAGTC | 1-10-1MOE | 892 |
| 398101 | 69357 | 69370 | TTTGATAAAGCCCT | 2-10-2MOE | 1064 |
| 389965 | 69417 | 69428 | CTGCAACATGAT | 1-10-1MOE | 1018 |
| 389764 | 69417 | 69428 | CTGCAACATGAT | 1-9-2MOE | 1018 |
| 398101 | 69503 | 69516 | TTTGATAAAGCCCT | 2-10-2MOE | 1064 |
| 368353 | 69519 | 69532 | CACTGATCCTGCAC | 2-10-2MOE | 1007 |
| 147074 | 69522 | 69533 | CCACTGATCCTG | 1-10-1MOE | 845 |
| 147081 | 69631 | 69642 | GCTCCTTCCACT | 1-10-1MOE | 1006 |
| 368353 | 69665 | 69678 | CACTGATCCTGCAC | 2-10-2MOE | 1007 |
| 147720 | 69729 | 69740 | GATCTCTCGAGT | 1-10-1MOE | 1117 |
| 147721 | 69736 | 69747 | AATGCAGGATCT | 1-10-1MOE | 1118 |
| 398167 | 69757 | 69768 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 147722 | 69762 | 69773 | AAAGTCAGGCCA | 1-10-1MOE | 1130 |
| 147723 | 69768 | 69779 | GACTCCAAA GTC | 1-10-1MOE | 892 |
| 147080 | 69776 | 69787 | CTCCTTCCACTG | 1-10-1MOE | 1021 |
| 147081 | 69777 | 69788 | GCTCCTTCCACT | 1-10-1MOE | 1006 |
| 398093 | 69811 | 69824 | TCGGACTTTGAAAA | 2-10-2MOE | 1009 |
| 398168 | 69813 | 69824 | TCGGACTTTGAA | 1-10-1MOE | 1008 |
| 147725 | 69814 | 69825 | CTCGGACTTTGA | 1-10-1MOE | 1119 |
| 147726 | 69819 | 69830 | TGACTCTCGGAC | 1-10-1MOE | 1120 |
| 147727 | 69860 | 69871 | CAGTGGACCACA | 1-10-1MOE | 1128 |
| 147720 | 69875 | 69886 | GATCTCTCGAGT | 1-10-1MOE | 1117 |
| 147721 | 69882 | 69893 | AATGCAGGATCT | 1-10-1MOE | 1118 |
| 147728 | 69899 | 69910 | GCCAGACAGAAG | 1-10-1MOE | 1013 |
| 398094 | 69901 | 69914 | ATCAGCCAGACAGA | 2-10-2MOE | 1010 |
| 398167 | 69903 | 69914 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 398092 | 69904 | 69917 | AGTCAGGCCATGTG | 2-10-2MOE | 1060 |
| 147722 | 69908 | 69919 | AAAGTCAGGCCA | 1-10-1MOE | 1130 |
| 147723 | 69914 | 69925 | GACTCCAAAGTC | 1-10-1MOE | 892 |
| 147729 | 69916 | 69927 | GTAAGAGGCAGG | 1-10-1MOE | 920 |
| 398095 | 69919 | 69932 | CATCAGCAAGAGGC | 2-10-2MOE | 1011 |
| 398093 | 69957 | 69970 | TCGGACTTTGAAAA | 2-10-2MOE | 1009 |
| 398168 | 69959 | 69970 | TCGGACTTTGAA | 1-10-1MOE | 1008 |
| 147725 | 69960 | 69971 | CTCGGACTTTGA | 1-10-1MOE | 1119 |
| 147726 | 69965 | 69976 | TGACTCTCGGAC | 1-10-1MOE | 1120 |
| 147704 | 69991 | 70002 | TTGTTCTTAGGA | 1-10-1MOE | 1012 |
| 147727 | 70006 | 70017 | CAGTGGACCACA | 1-10-1MOE | 1128 |
| 147728 | 70045 | 70056 | GCCAGACAGAAG | 1-10-1MOE | 1013 |
| 398094 | 70047 | 70060 | ATCAGCCAGACAGA | 2-10-2MOE | 1010 |
| 398169 | 70048 | 70059 | TCAGCCAGACAG | 1-10-1MOE | 909 |
| 147729 | 70062 | 70073 | GTAAGAGGCAGG | 1-10-1MOE | 920 |
| 398095 | 70065 | 70078 | CATCAGCAAGAGGC | 2-10-2MOE | 1011 |
| 147704 | 70137 | 70148 | TTGTTCTTAGGA | 1-10-1MOE | 1012 |
| 147697 | 70161 | 70172 | CCCCAGCAGCGG | 1-10-1MOE | 1000 |
| 147697 | 70307 | 70318 | CCCCAGCAGCGG | 1-10-1MOE | 1000 |
| 147728 | 70450 | 70461 | GCCAGACAGAAG | 1-10-1MOE | 1013 |
| 398164 | 70464 | 70475 | TTGTCGATCTGC | 1-10-1MOE | 1014 |
| 147730 | 70465 | 70476 | CTTGTCCATCAG | 1-10-1MOE | 1121 |
| 147731 | 70471 | 70482 | TTTCCTCTTGTC | 1-10-1MOE | 934 |
| 147732 | 70476 | 70487 | GGGTCTTTCCTC | 1-10-1MOE | 1122 |
| 147733 | 70497 | 70508 | TTCTTGATGTCC | 1-10-1MOE | 891 |
| 398096 | 70562 | 70575 | GGAGAAGCGCAGCT | 2-10-2MOE | 1015 |
| 147735 | 70564 | 70575 | GGAGAAGCGCAG | 1-10-1MOE | 1016 |
| 147736 | 70569 | 70580 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147737 | 70575 | 70586 | ACAGCCAGGTAG | 1-10-1MOE | 1067 |
| 147728 | 70596 | 70607 | GCCAGACAGAAG | 1-10-1MOE | 1013 |
| 398164 | 70610 | 70621 | TTGTCGATCTGC | 1-10-1MOE | 1014 |
| 147730 | 70611 | 70622 | CTTGTCCATCAG | 1-10-1MOE | 1121 |
| 368349 | 70616 | 70629 | CTGCACTGACGAGT | 2-10-2MOE | 1017 |
| 147731 | 70617 | 70628 | TTTCCTCTTGTC | 1-10-1MOE | 934 |
| 147732 | 70622 | 70633 | GGGTCTTTCCTC | 1-10-1MOE | 1122 |
| 147733 | 70643 | 70654 | TTCTTGATGTCC | 1-10-1MOE | 891 |
| 398096 | 70708 | 70721 | GGAGAAGCGCAGCT | 2-10-2MOE | 1015 |
| 147735 | 70710 | 70721 | GGAGAAGCGCAG | 1-10-1MOE | 1016 |
| 147736 | 70715 | 70726 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147737 | 70721 | 70732 | ACAGCCAGGTAG | 1-10-1MOE | 1067 |
| 389764 | 70784 | 70795 | CTGCAACATGAT | 1-9-2MOE | 1018 |
| 389965 | 70784 | 70795 | CTGCAACATGAT | 1-10-1MOE | 1018 |
| 389965 | 70930 | 70941 | CTGCAACATGAT | 1-10-1MOE | 1018 |
| 389764 | 70930 | 70941 | CTGCAACATGAT | 1-9-2MOE | 1018 |
| 368386 | 70995 | 71010 | CACTGATCCTTAGAAG | 3-10-3MOE | 1123 |
| 368367 | 70997 | 71010 | CACTGATCCTTAGA | 2-10-2MOE | 1124 |
| 368387 | 70997 | 71012 | TCCACTGATCCTTAGA | 3-10-3MOE | 1125 |
| 368354 | 70999 | 71012 | TCCACTGATCCTGC | 2-10-2MOE | 1024 |
| 368374 | 70999 | 71014 | CTTCCACTGATCCTGC | 3-10-3MOE | 1126 |
| 368368 | 70999 | 71012 | TCCACTGATCCTTA | 2-10-2MOE | 1127 |
| 368388 | 70999 | 71014 | CTTCCACTGATCCTTA | 3-10-3MOE | 895 |
| 368355 | 71000 | 71013 | TTCCACTGATCCTG | 2-10-2MOE | 1025 |
| 147074 | 71000 | 71011 | CCACTGATCCTG | 1-10-1MOE | 845 |
| 368375 | 71000 | 71015 | CCTTCCACTGATCCTG | 3-10-3MOE | 1020 |
| 147075 | 71001 | 71012 | TCCACTGATCCT | 1-10-1MOE | 1026 |
| 368376 | 71001 | 71016 | TCCTTCCACTGATCCT | 3-10-3MOE | 1028 |
| 147076 | 71002 | 71013 | TTCCACTGATCC | 1-10-1MOE | 1029 |
| 368357 | 71002 | 71015 | CCTTCCACTGATCC | 2-10-2MOE | 1046 |
| 368377 | 71002 | 71017 | CTCCTTCCACTGATCC | 3-10-3MOE | 1030 |
| 147077 | 71003 | 71014 | CTTCCACTGATC | 1-10-1MOE | 1047 |
| 368378 | 71003 | 71018 | GCTCCTTCCACTGATC | 3-10-3MOE | 1032 |
| 147078 | 71004 | 71015 | CCTTCCACTGAT | 1-10-1MOE | 1044 |
| 368359 | 71005 | 71018 | GCTCCTTCCACTGA | 2-10-2MOE | 1033 |
| 368379 | 71005 | 71020 | AAGCTCCTTCCACTGA | 3-10-3MOE | 1034 |
| 147079 | 71005 | 71016 | TCCTTCCACTGA | 1-10-1MOE | 1001 |
| 147080 | 71006 | 71017 | CTCCTTCCACTG | 1-10-1MOE | 1021 |
| 368360 | 71007 | 71020 | AAGCTCCTTCCACT | 2-10-2MOE | 1035 |
| 368380 | 71007 | 71022 | GAAAGCTCCTTCCACT | 3-10-3MOE | 896 |
| 147081 | 71007 | 71018 | GCTCCTTCCACT | 1-10-1MOE | 1006 |
| 147082 | 71008 | 71019 | AGCTCCTTCCAC | 1-10-1MOE | 1036 |
| 368361 | 71009 | 71022 | GAAAGCTCCTTCCA | 2-10-2MOE | 962 |
| 368381 | 71009 | 71024 | GGGAAAGCTCCTTCCA | 3-10-3MOE | 1037 |
| 147738 | 71067 | 71078 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 147739 | 71071 | 71082 | CGTTTGGGTGGC | 1-10-1MOE | 1023 |
| 147740 | 71088 | 71099 | TGTGAGGCTCCA | 1-10-1MOE | 1062 |
| 147741 | 71129 | 71140 | CACCCACTGGTG | 1-10-1MOE | 1055 |
| 368366 | 71141 | 71154 | CTGATCCTTAGAAG | 2-10-2MOE | 1019 |
| 368386 | 71141 | 71156 | CACTGATCCTTAGAAG | 3-10-3MOE | 1123 |
| 368367 | 71143 | 71156 | CACTGATCCTTAGA | 2-10-2MOE | 1124 |
| 368387 | 71143 | 71158 | TCCACTGATCCTTAGA | 3-10-3MOE | 1125 |
| 368374 | 71145 | 71160 | CTTCCACTGATCCTGC | 3-10-3MOE | 1126 |
| 368354 | 71145 | 71158 | TCCACTGATCCTGC | 2-10-2MOE | 1024 |
| 368368 | 71145 | 71158 | TCCACTGATCCTTA | 2-10-2MOE | 1127 |
| 368388 | 71145 | 71160 | CTTCCACTGATCCTTA | 3-10-3MOE | 895 |
| 368355 | 71146 | 71159 | TTCCACTGATCCTG | 2-10-2MOE | 1025 |
| 368375 | 71146 | 71161 | CCTTCCACTGATCCTG | 3-10-3MOE | 1020 |
| 147075 | 71147 | 71158 | TCCACTGATCCT | 1-10-1MOE | 1026 |
| 368356 | 71147 | 71160 | CTTCCACTGATCCT | 2-10-2MOE | 1027 |
| 368376 | 71147 | 71162 | TCCTTCCACTGATCCT | 3-10-3MOE | 1028 |
| 147076 | 71148 | 71159 | TTCCACTGATCC | 1-10-1MOE | 1029 |
| 368357 | 71148 | 71161 | CCTTCCACTGATCC | 2-10-2MOE | 1046 |
| 368377 | 71148 | 71163 | CTCCTTCCACTGATCC | 3-10-3MOE | 1030 |
| 147077 | 71149 | 71160 | CTTCCACTGATC | 1-10-1MOE | 1047 |
| 368358 | 71149 | 71162 | TCCTTCCACTGATC | 2-10-2MOE | 1031 |
| 368378 | 71149 | 71164 | GCTCCTTCCACTGATC | 3-10-3MOE | 1032 |
| 147078 | 71150 | 71161 | CCTTCCACTGAT | 1-10-1MOE | 1044 |
| 368359 | 71151 | 71164 | GCTCCTTCCACTGA | 2-10-2MOE | 1033 |
| 147079 | 71151 | 71162 | TCCTTCCACTGA | 1-10-1MOE | 1001 |
| 368379 | 71151 | 71166 | AAGCTCCTTCCACTGA | 3-10-3MOE | 1034 |
| 147080 | 71152 | 71163 | CTCCTTCCACTG | 1-10-1MOE | 1021 |
| 368380 | 71153 | 71168 | GAAAGCTCCTTCCACT | 3-10-3MOE | 896 |
| 147081 | 71153 | 71164 | GCTCCTTCCACT | 1-10-1MOE | 1006 |
| 368360 | 71153 | 71166 | AAGCTCCTTCCACT | 2-10-2MOE | 1035 |
| 147082 | 71154 | 71165 | AGCTCCTTCCAC | 1-10-1MOE | 1036 |
| 368381 | 71155 | 71170 | GGGAAAGCTCCTTCCA | 3-10-3MOE | 1037 |
| 368361 | 71155 | 71168 | GAAAGCTCCTTCCA | 2-10-2MOE | 962 |
| 398097 | 71158 | 71171 | GGCAGTCTTTATCC | 2-10-2MOE | 897 |
| 147738 | 71213 | 71224 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 147739 | 71217 | 71228 | CGTTTGGGTGGC | 1-10-1MOE | 1023 |
| 147740 | 71234 | 71245 | TGTGAGGCTCCA | 1-10-1MOE | 1062 |
| 147741 | 71275 | 71286 | CACCCACTGGTG | 1-10-1MOE | 1055 |
| 398097 | 71304 | 71317 | GGCAGTCTTTATCC | 2-10-2MOE | 897 |
| 147727 | 71702 | 71713 | CAGTGGACCACA | 1-10-1MOE | 1128 |
| 147727 | 71848 | 71859 | CAGTGGACCACA | 1-10-1MOE | 1128 |
| 390030 | 71986 | 71997 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147102 | 72015 | 72026 | TGCGAGTTGTTG | 1-10-1MOE | 1129 |
| 390030 | 72132 | 72143 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 147102 | 72161 | 72172 | TGCGAGTTGTTG | 1-10-1MOE | 1129 |
| 147722 | 72199 | 72210 | AAAGTCAGGCCA | 1-10-1MOE | 1130 |
| 147696 | 72232 | 72243 | TGGATGATTGGC | 1-10-1MOE | 906 |
| 147741 | 72254 | 72265 | CACCCACTGGTG | 1-10-1MOE | 1055 |
| 147722 | 72345 | 72356 | AAAGTCAGGCCA | 1-10-1MOE | 1130 |
| 147696 | 72378 | 72389 | TGGATGATTGGC | 1-10-1MOE | 906 |
| 147741 | 72400 | 72411 | CACCCACTGGTG | 1-10-1MOE | 1055 |
| 147711 | 72446 | 72457 | AAGGGCCCTGGG | 1-10-1MOE | 1040 |
| 398098 | 72574 | 72587 | TAACTTCAGTGTCT | 2-10-2MOE | 1131 |
| 147742 | 72575 | 72586 | AACTTCAGTGTC | 1-10-1MOE | 1041 |
| 147698 | 72595 | 72606 | CCCGCCACCACC | 1-10-1MOE | 928 |
| 147743 | 72690 | 72701 | AGGGCTTCCAGT | 1-10-1MOE | 1042 |
| 398099 | 72690 | 72703 | GAAGGGCTTCCAGT | 2-10-2MOE | 1132 |
| 147744 | 72694 | 72705 | AGGAAGGGCTTC | 1-10-1MOE | 1043 |
| 398100 | 72697 | 72710 | TGACCAGGAAGGGC | 2-10-2MOE | 1133 |
| 147745 | 72700 | 72711 | TTGACCAGGAAG | 1-10-1MOE | 1058 |
| 398098 | 72720 | 72733 | TAACTTCAGTGTCT | 2-10-2MOE | 1131 |
| 147742 | 72721 | 72732 | AACTTCAGTGTC | 1-10-1MOE | 1041 |
| 147698 | 72741 | 72752 | CCCGCCACCACC | 1-10-1MOE | 928 |
| 398157 | 72757 | 72770 | GGAAACATACCCTG | 2-10-2MOE | 1045 |
| 147743 | 72836 | 72847 | AGGGCTTCCAGT | 1-10-1MOE | 1042 |
| 398099 | 72836 | 72849 | GAAGGGCTTCCAGT | 2-10-2MOE | 1132 |
| 147744 | 72840 | 72851 | AGGAAGGGCTTC | 1-10-1MOE | 1043 |
| 398100 | 72843 | 72856 | TGACCAGGAAGGGC | 2-10-2MOE | 1133 |
| 147745 | 72846 | 72857 | TTGACCAGGAAG | 1-10-1MOE | 1058 |
| 147076 | 72898 | 72909 | TTCCACTGATCC | 1-10-1MOE | 1029 |
| 368357 | 72898 | 72911 | CCTTCCACTGATCC | 2-10-2MOE | 1046 |
| 147077 | 72899 | 72910 | CTTCCACTGATC | 1-10-1MOE | 1047 |
| 147078 | 72900 | 72911 | CCTTCCACTGAT | 1-10-1MOE | 1044 |
| 398157 | 72903 | 72916 | GGAAACATACCCTG | 2-10-2MOE | 1045 |
| 398158 | 72983 | 72996 | AGGCCCTGAGATTA | 2-10-2MOE | 1134 |
| 398159 | 72988 | 73001 | GGTTAAGGCCCTGA | 2-10-2MOE | 1135 |
| 398160 | 72993 | 73006 | GAATAGGTTAAGGC | 2-10-2MOE | 1048 |
| 147076 | 73044 | 73055 | TTCCACTGATCC | 1-10-1MOE | 1029 |
| 368357 | 73044 | 73057 | CCTTCCACTGATCC | 2-10-2MOE | 1046 |
| 147077 | 73045 | 73056 | CTTCCACTGATC | 1-10-1MOE | 1047 |
| 147078 | 73046 | 73057 | CCTTCCACTGAT | 1-10-1MOE | 1044 |
| 147746 | 73052 | 73063 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398161 | 73092 | 73105 | AACAATGTGTTGTA | 2-10-2MOE | 1049 |
| 147746 | 73101 | 73112 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398158 | 73129 | 73142 | AGGCCCTGAGATTA | 2-10-2MOE | 1134 |
| 398159 | 73134 | 73147 | GGTTAAGGCCCTGA | 2-10-2MOE | 1135 |
| 398160 | 73139 | 73152 | GAATAGGTTAAGGC | 2-10-2MOE | 1048 |
| 147746 | 73198 | 73209 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398161 | 73238 | 73251 | AACAATGTGTTGTA | 2-10-2MOE | 1049 |
| 147746 | 73247 | 73258 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 147088 | 73273 | 73284 | CCCTCTACACCA | 1-10-1MOE | 1050 |
| 398105 | 73401 | 73414 | TGCACAGGCAGGTT | 2-10-2MOE | 1066 |
| 398105 | 73547 | 73560 | TGCACAGGCAGGTT | 2-10-2MOE | 1066 |
| 147741 | 73559 | 73570 | CACCCACTGGTG | 1-10-1MOE | 1055 |
| 147741 | 73705 | 73716 | CACCCACTGGTG | 1-10-1MOE | 1055 |
| 398162 | 73968 | 73981 | ACCAAACAGTTCAG | 2-10-2MOE | 1057 |
| 147745 | 73991 | 74002 | TTGACCAGGAAG | 1-10-1MOE | 1058 |
| 398167 | 74008 | 74019 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 398092 | 74009 | 74022 | AGTCAGGCCATGTG | 2-10-2MOE | 1060 |
| 398162 | 74114 | 74127 | ACCAAACAGTTCAG | 2-10-2MOE | 1057 |
| 147745 | 74137 | 74148 | TTGACCAGGAAG | 1-10-1MOE | 1058 |
| 398167 | 74154 | 74165 | CAGGCCATGTGG | 1-10-1MOE | 1059 |
| 147089 | 74280 | 74291 | TCCCTCTACACC | 1-10-1MOE | 956 |
| 147090 | 74281 | 74292 | TTCCCTCTACAC | 1-10-1MOE | 955 |
| 389949 | 74310 | 74321 | GCGCGAGCCCGA | 1-10-1MOE | 1061 |
| 147740 | 74339 | 74350 | TGTGAGGCTCCA | 1-10-1MOE | 1062 |
| 389950 | 74381 | 74392 | CCCTGAAGGTTC | 1-10-1MOE | 1063 |
| 147089 | 74426 | 74437 | TCCCTCTACACC | 1-10-1MOE | 956 |
| 147090 | 74427 | 74438 | TTCCCTCTACAC | 1-10-1MOE | 955 |
| 389949 | 74456 | 74467 | GCGCGAGCCCGA | 1-10-1MOE | 1061 |
| 147685 | 74490 | 74501 | GGCTGACATTCA | 1-10-1MOE | 975 |
| 398101 | 74510 | 74523 | TTTGATAAAGCCCT | 2-10-2MOE | 1064 |
| 398102 | 74536 | 74549 | CTACCTGAGGATTT | 2-10-2MOE | 899 |
| 398103 | 74543 | 74556 | CCCAGTACTACCTG | 2-10-2MOE | 900 |
| 147685 | 74636 | 74647 | GGCTGACATTCA | 1-10-1MOE | 975 |
| 398102 | 74682 | 74695 | CTACCTGAGGATTT | 2-10-2MOE | 899 |
| 398103 | 74689 | 74702 | CCCAGTACTACCTG | 2-10-2MOE | 900 |
| 147736 | 74737 | 74748 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 398104 | 74805 | 74818 | CAAGAAGACCTTAC | 2-10-2MOE | 1065 |
| 147736 | 74883 | 74894 | AGGTAGGAGAAG | 1-10-1MOE | 963 |
| 147737 | 74893 | 74904 | ACAGCCAGGTAG | 1-10-1MOE | 1067 |
| 398105 | 74894 | 74907 | TGCACAGGCAGGTT | 2-10-2MOE | 1066 |
| 147737 | 74919 | 74930 | ACAGCCAGGTAG | 1-10-1MOE | 1067 |
| 398095 | 74940 | 74953 | CATCAGCAAGAGGC | 2-10-2MOE | 1011 |
| 398104 | 74951 | 74964 | CAAGAAGACCTTAC | 2-10-2MOE | 1065 |
| 398106 | 74974 | 74987 | TGGAAAACTGCACC | 2-10-2MOE | 1068 |
| 398107 | 74980 | 74993 | TATTCCTGGAAAAC | 2-10-2MOE | 902 |
| 147745 | 75030 | 75041 | TTGACCAGGAAG | 1-10-1MOE | 1058 |
| 147737 | 75039 | 75050 | ACAGCCAGGTAG | 1-10-1MOE | 1067 |
| 398105 | 75040 | 75053 | TGCACAGGCAGGTT | 2-10-2MOE | 1066 |
| 147737 | 75065 | 75076 | ACAGCCAGGTAG | 1-10-1MOE | 1067 |
| 398108 | 75077 | 75090 | GGAATGTCTGAGTT | 2-10-2MOE | 1136 |
| 398095 | 75086 | 75099 | CATCAGCAAGAGGC | 2-10-2MOE | 1011 |
| 147691 | 75108 | 75119 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 398106 | 75120 | 75133 | TGGAAAACTGCACC | 2-10-2MOE | 1068 |
| 398107 | 75126 | 75139 | TATTCCTGGAAAAC | 2-10-2MOE | 902 |
| 147738 | 75155 | 75166 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 147745 | 75176 | 75187 | TTGACCAGGAAG | 1-10-1MOE | 1058 |
| 398108 | 75223 | 75236 | GGAATGTCTGAGTT | 2-10-2MOE | 1136 |
| 398109 | 75247 | 75260 | CAAGAAGTGTGGTT | 2-10-2MOE | 903 |
| 147691 | 75254 | 75265 | GAGGTGGGAAAA | 1-10-1MOE | 966 |
| 147738 | 75301 | 75312 | TGGGTGGCCGGG | 1-10-1MOE | 1069 |
| 398110 | 75385 | 75398 | GTTCCCTTTGCAGG | 2-10-2MOE | 952 |
| 147091 | 75387 | 75398 | GTTCCCTCTACA | 1-10-1MOE | 1004 |
| 398109 | 75393 | 75406 | CAAGAAGTGTGGTT | 2-10-2MOE | 903 |
| 398111 | 75470 | 75483 | GTGAAAATGCTGGC | 2-10-2MOE | 904 |
| 401385 | 75494 | 75507 | CCCAGTGGGTTTGA | 2-10-2MOE | 890 |
| 398166 | 75499 | 75510 | GGGCTTCTTCCA | 1-10-1MOE | 1070 |
| 147091 | 75525 | 75536 | GTTCCCTCTACA | 1-10-1MOE | 1004 |
| 147092 | 75526 | 75537 | TGTTCCCTCTAC | 1-10-1MOE | 901 |
| 398110 | 75531 | 75544 | GTTCCCTTTGCAGG | 2-10-2MOE | 952 |
| 147091 | 75533 | 75544 | GTTCCCTCTACA | 1-10-1MOE | 1004 |
| 147706 | 75540 | 75551 | GCTGA CATCTCG | 1-10-1MOE | 1071 |
| 398112 | 75584 | 75597 | CAGCCTGGCACCTA | 2-10-2MOE | 1072 |
| 398111 | 75616 | 75629 | GTGAAAATGCTGGC | 2-10-2MOE | 904 |
| 147746 | 75617 | 75628 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398166 | 75645 | 75656 | GGGCTTCTTCCA | 1-10-1MOE | 1070 |
| 147091 | 75671 | 75682 | GTTCCCTCTACA | 1-10-1MOE | 1004 |
| 147092 | 75672 | 75683 | TGTTCCCTCTAC | 1-10-1MOE | 901 |
| 398113 | 75693 | 75706 | AGGAGGTTAAACCA | 2-10-2MOE | 905 |
| 398112 | 75730 | 75743 | CAGCCTGGCACCTA | 2-10-2MOE | 1072 |
| 147746 | 75763 | 75774 | TAAAAACAACAA | 1-10-1MOE | 1073 |
| 398114 | 75770 | 75783 | AGGCATATAGCAGA | 2-10-2MOE | 1075 |
| 398115 | 75786 | 75799 | AGTAAATATTGGCT | 2-10-2MOE | 1076 |
| 398116 | 75799 | 75812 | TAATGACCTGATGA | 2-10-2MOE | 1137 |
| 398113 | 75839 | 75852 | AGGAGGTTAAACCA | 2-10-2MOE | 905 |
| 390030 | 75839 | 75850 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 398115 | 75932 | 75945 | AGTAAATATTGGCT | 2-10-2MOE | 1076 |
| 398116 | 75945 | 75958 | TAATGACCTGATGA | 2-10-2MOE | 1137 |
| 398106 | 75982 | 75995 | TGGAAAACTGCACC | 2-10-2MOE | 1068 |
| 390030 | 75985 | 75996 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 398106 | 76127 | 76140 | TGGAAAACTGCACC | 2-10-2MOE | 1068 |
| 147690 | 76196 | 76207 | TGAAGTTAATTC | 1-10-1MOE | 1138 |
| 147690 | 76341 | 76352 | TGAAGTTAATTC | 1-10-1MOE | 1138 |
| 147724 | 76740 | 76751 | GAAATTGAGGAA | 1-10-1MOE | 1139 |
| 147089 | 76873 | 76884 | TCCCTCTACACC | 1-10-1MOE | 956 |
| 147679 | 76881 | 76892 | CAAAAGGATCCC | 1-10-1MOE | 907 |
| 147724 | 76885 | 76896 | GAAATTGAGGAA | 1-10-1MOE | 1139 |
| 147089 | 77018 | 77029 | TCCCTCTACACC | 1-10-1MOE | 956 |
| 147679 | 77026 | 77037 | CAAAAGGATCCC | 1-10-1MOE | 907 |
| 147693 | 77240 | 77251 | GTGCGCTCCCAT | 1-10-1MOE | 1078 |
| 147697 | 77759 | 77770 | CCCCAGCAGCGG | 1-10-1MOE | 1000 |
In certain embodiments, the target zone is the nucleotide 177-190 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 177-190 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 177-190 comprises the nucleotide sequence that is selected from SEQ ID NO 886,859 or 853.In some this embodiment, the short antisense compounds of the nucleotide 177-190 of targeting SEQ ID NO:11 is selected from Isis No 147022,147023 or 147024.
In certain embodiments, the target zone is the nucleotide 195-228 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 195-228 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 195-228 comprises the nucleotide sequence that is selected from SEQ ID NO 877,868,882,886,859,853,865,835,843,846,842,848,874,849,863,855,850,864 or 834.In some this embodiment, the short antisense compounds of the nucleotide 195-228 of targeting SEQ ID NO:11 is selected from Isis No 147019,147020,147021,147022,147023,147024,147025,147026,147027,147028,147073,147029,147030,147036,147037,147038,147039,147040 or 147041.
In certain embodiments, the target zone is the nucleotide 323-353 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 323-353 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 323-353 comprises the nucleotide sequence that is selected from SEQ ID NO 866,881,869,883,858,833,875,837,829,871,884,887,839,830,840,861 or 879.In some this embodiment, the short antisense compounds of the nucleotide 323-353 of targeting SEQ ID NO:11 is selected from Isis No 147042,147043,147044,147045,147046,147047,147051,147052,147053,147054,147055,147056,147057,147058,147059,147060 or 147061.
In certain embodiments, the target zone is the nucleotide 322-353 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 177-190 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 322-353 comprises the nucleotide sequence that is selected from SEQ ID NO 842,866,881,869,883,858,833,875,837,829,871,884,887,839,830,840,861 or 879.In some this embodiment, the short antisense compounds of the nucleotide 322-353 of targeting SEQ ID NO:11 is selected from Isis No 147073,147042,147043,147044,147045,147046,147047,147051,147052,147053,147054,147055,147056,147057,147058,147059,147060 or 147061.
In certain embodiments, the target zone is the nucleotide 679-799 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 679-799 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 679-799 comprises the nucleotide sequence that is selected from SEQ ID NO 883,858,883 or 858.In some this embodiment, the short antisense compounds of the nucleotide 679-799 of targeting SEQ IDNO:11 is selected from Isis No 147045,147046,147045 or 147046.
In certain embodiments, the target zone is the nucleotide 679-827 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 679-827 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 679-827 comprises the nucleotide sequence that is selected from SEQ ID NO 883,858,883,858 or 851.In some this embodiment, the short antisense compounds of the nucleotide 679-827 of targeting SEQ ID NO:11 is selected from Isis No 147045,147046,147045,147046 or 147066.
In certain embodiments, the target zone is the nucleotide 1024-1046 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 1024-1046 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 1024-1046 comprises the nucleotide sequence that is selected from SEQ ID NO 841,862,880,857,851,876,838,860,878,856,832 or 842.In some this embodiment, the short antisense compounds of the nucleotide 1024-1046 of targeting SEQ ID NO:11 is selected from Isis No 147062,147063,147064,147065,147066,147067,147068,147069,147070,147071,147072 or 147073.
In certain embodiments, the target zone is the nucleotide 992-1046 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 992-1046 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 992-1046 comprises the nucleotide sequence that is selected from SEQ ID NO 831,841,862,880,857,851,876,838,860,878,856,832 or 842.In some this embodiment, the short antisense compounds of the nucleotide 992-1046 of targeting SEQ ID NO:11 is selected from Isis No 404131,147062,147063,147064,147065,147066,147067,147068,147069,147070,147071,147072 or 147073.
In certain embodiments, the target zone is the nucleotide 1868-1881 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 1868-1881 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 1868-1881 comprises the nucleotide sequence that is selected from SEQ ID NO 886,859 or 853.In some this embodiment, the short antisense compounds of the nucleotide 1868-1881 of targeting SEQ ID NO:11 is selected from Isis No 147022,147023 or 147024.
In certain embodiments, the target zone is the nucleotide 1886-1919 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 1886-1919 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 1886-1919 comprises the nucleotide sequence that is selected from SEQ ID NO 877,868,882,886,859,865,843,846,874,863,855,864 or 834.In some this embodiment, the short antisense compounds of the nucleotide 1886-1919 of targeting SEQ ID NO:11 is selected from Isis No 147019,147020,147021,147022,147023,147025,147027,147028,147030,147037,147038,147040 or 147041.
In certain embodiments, the target zone is the nucleotide 1869-1919 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 1869-1919 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 1869-1919 comprises the nucleotide sequence that is selected from SEQ ID NO 859,853,877,868,882,886,859,865,843,846,874,863,855,864 or 834.In some this embodiment, the short antisense compounds of the nucleotide 1869-1919 of targeting SEQ ID NO:11 is selected from Isis No 147023,147024,147019,147020,147021,147022,147023,147025,147027,147028,147030,147037,147038,147040 or 147041.
In certain embodiments, the target zone is the nucleotide 1976-1989 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 1976-1989 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 1976-1989 comprises the nucleotide sequence that is selected from SEQ ID NO 886,859 or 853.In some this embodiment, the short antisense compounds of the nucleotide 1976-1989 of targeting SEQ ID NO:11 is selected from Isis No 147022,147023 or 147024.
In certain embodiments, the target zone is the nucleotide 1995-2027 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 1995-2027 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 1995-2027 comprises the nucleotide sequence that is selected from SEQ ID NO 868,882,886,859,853,865,835,843,846,848,874,849,863,855,850,864 or 834.In some this embodiment, the short antisense compounds of the nucleotide 1995-2027 of targeting SEQ ID NO:11 is selected from Isis No 147020,147021,147022,147023,147024,147025,147026,147027,147028,147029,147030,147036,147037,147038,147039,147040 or 147041.
In certain embodiments, the target zone is the nucleotide 2366-2382 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 2366-2382 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 2366-2382 comprises the nucleotide sequence that is selected from SEQ ID NO 867 or 873.In some this embodiment, the short antisense compounds of the nucleotide 2366-2382 of targeting SEQ ID NO:11 is selected from Isis No 404199 or 404134.
In certain embodiments, the target zone is the nucleotide 6220-6233 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 6220-6233 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 6220-6233 comprises the nucleotide sequence that is selected from SEQ ID NO 870,836 or 844.In some this embodiment, the short antisense compounds of the nucleotide 6220-6233 of targeting SEQ ID NO:11 is selected from Isis No 147032,147033 or 147034.
In certain embodiments, the target zone is the nucleotide 6288-6300 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 6288-6300 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 6288-6300 comprises the nucleotide sequence that is selected from SEQ ID NO 869 or 883.In some this embodiment, the short antisense compounds of the nucleotide 6288-6300 of targeting SEQ ID NO:11 is selected from Isis No 147044 or 147045.
In certain embodiments, the target zone is the nucleotide 6329-6342 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 6329-6342 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 6329-6342 comprises the nucleotide sequence that is selected from SEQ ID NO 870,836 or 844.In some this embodiment, the short antisense compounds of the nucleotide 6329-6342 of targeting SEQ ID NO:11 is selected from Isis No 147032,147033 or 147034.
In certain embodiments, the target zone is the nucleotide 6397-6409 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 6397-6409 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 6397-6409 comprises the nucleotide sequence that is selected from SEQ ID NO 869 or 883.In some this embodiment, the short antisense compounds of the nucleotide 6397-6409 of targeting SEQ ID NO:11 is selected from Isis No 147044 or 147045.
In certain embodiments, the target zone is the nucleotide 7057-7178 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 7057-7178 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 7057-7178 comprises the nucleotide sequence that is selected from SEQ ID NO 830,840,861,830 or 840.In some this embodiment, the short antisense compounds of the nucleotide 7057-7178 of targeting SEQ ID NO:11 is selected from Isis No 147058,147059,147060,147058 or 147059.
In certain embodiments, the target zone is the nucleotide 8630-8750 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 8630-8750 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 8630-8750 comprises the nucleotide sequence that is selected from SEQ ID NO 843,846,843 or 846.In some this embodiment, the short antisense compounds of the nucleotide 8630-8750 of targeting SEQ ID NO:11 is selected from Isis No 147027,147028,147027 or 147028.
In certain embodiments, the target zone is the nucleotide 10957-11077 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 10957-11077 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 10957-11077 comprises the nucleotide sequence that is selected from SEQ ID NO 881,869,881 or 869.In some this embodiment, the short antisense compounds of the nucleotide 10957-11077 of targeting SEQ ID NO:11 is selected from Isis No 147043,147044,147043 or 147044.
In certain embodiments, the target zone is the nucleotide 11605-11623 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 11605-11623 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 11605-11623 comprises the nucleotide sequence that is selected from SEQ ID NO 856,878 or 856.In some this embodiment, the short antisense compounds of the nucleotide 11605-11623 of targeting SEQ ID NO:11 is selected from Isis No 147071,147070 or 147071.
In certain embodiments, the target zone is the nucleotide 12805-12817 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 12805-12817 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 12805-12817 comprises the nucleotide sequence that is selected from SEQ ID NO 874 or 885.In some this embodiment, the short antisense compounds of the nucleotide 12805-12817 of targeting SEQ ID NO:11 is selected from Isis No 147030 or 147031.
In certain embodiments, the target zone is the nucleotide 12986-12998 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 12986-12998 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 12986-12998 comprises the nucleotide sequence that is selected from SEQ ID NO 874 or 885.In some this embodiment, the short antisense compounds of the nucleotide 12986-12998 of targeting SEQ ID NO:11 is selected from Isis No 147030 or 147031.
In certain embodiments, the target zone is the nucleotide 15560-15572 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 15560-15572 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 15560-15572 comprises the nucleotide sequence that is selected from SEQ ID NO 876 or 838.In some this embodiment, the short antisense compounds of the nucleotide 15560-15572 of targeting SEQ ID NO:11 is selected from Isis No 147067 or 147068.
In certain embodiments, the target zone is the nucleotide 17787-17941 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 17787-17941 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 17787-17941 comprises the nucleotide sequence that is selected from SEQ ID NO 874 or 880.In some this embodiment, the short antisense compounds of the nucleotide 17787-17941 of targeting SEQ ID NO:11 is selected from Isis No 147030 or 147064.
In certain embodiments, the target zone is the nucleotide 21190-21202 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 21190-21202 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 21190-21202 comprises the nucleotide sequence that is selected from SEQ ID NO 843 or 846.In some this embodiment, the short antisense compounds of the nucleotide 21190-21202 of targeting SEQ ID NO:11 is selected from Isis No 147027 or 147028.
In certain embodiments, the target zone is the nucleotide 21358-21370 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 21358-21370 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 21358-21370 comprises the nucleotide sequence that is selected from SEQ ID NO 843 or 846.In some this embodiment, the short antisense compounds of the nucleotide 21358-21370 of targeting SEQ ID NO:11 is selected from Isis No 017027 or 147028.
In certain embodiments, the target zone is the nucleotide 24318-24332 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 24318-24332 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 24318-24332 comprises the nucleotide sequence that is selected from SEQ ID NO 881,869,883 or 858.In some this embodiment, the short antisense compounds of the nucleotide 24318-24332 of targeting SEQ ID NO:11 is selected from Isis No 147043,147044,147045 or 147046.
In certain embodiments, the target zone is the nucleotide 24486-24501 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 24486-24501 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 24486-24501 comprises the nucleotide sequence that is selected from SEQ ID NO 881,869,858 or 833.In some this embodiment, the short antisense compounds of the nucleotide 24486-24501 of targeting SEQ ID NO:11 is selected from Isis No 147043,147044,147046 or 147047.
In certain embodiments, the target zone is the nucleotide 25065-25077 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 25065-25077 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 25065-25077 comprises the nucleotide sequence that is selected from SEQ ID NO 864 or 834.In some this embodiment, the short antisense compounds of the nucleotide 25065-25077 of targeting SEQ ID NO:11 is selected from Isis No 147040 or 147041.
In certain embodiments, the target zone is the nucleotide 25232-25245 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 25232-25245 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 25232-25245 comprises the nucleotide sequence that is selected from SEQ ID NO 850,864 or 834.In some this embodiment, the short antisense compounds of the nucleotide 25232-25245 of targeting SEQ ID NO:11 is selected from Isis No 147039,147040 or 147041.
In certain embodiments, the target zone is the nucleotide 25508-25523 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 25508-25523 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 25508-25523 comprises the nucleotide sequence that is selected from SEQ ID NO 839 or 879.In some this embodiment, the short antisense compounds of the nucleotide 25508-25523 of targeting SEQ ID NO:11 is selected from Isis No 147057 or 147061.
In certain embodiments, the target zone is the nucleotide 25676-28890 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 25676-28890 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 25676-28890 comprises the nucleotide sequence that is selected from SEQ ID NO 839,860 or 878.In some this embodiment, the short antisense compounds of the nucleotide 25676-28890 of targeting SEQ ID NO:11 is selected from Isis No 147057,147069 or 147070.
In certain embodiments, the target zone is the nucleotide 33056-33069 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 33056-33069 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 33056-33069 comprises the nucleotide sequence that is selected from SEQ ID NO 860,878 or 856.In some this embodiment, the short antisense compounds of the nucleotide 33056-33069 of targeting SEQ ID NO:11 is selected from Isis No 147069,147070 or 147071.
In certain embodiments, the target zone is the nucleotide 33205-33217 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 33205-33217 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 33205-33217 comprises the nucleotide sequence that is selected from SEQ ID NO 878 or 856.In some this embodiment, the short antisense compounds of the nucleotide 33205-33217 of targeting SEQ ID NO:11 is selected from Isis No 14707 or 147071.
In certain embodiments, the target zone is the nucleotide 33318-33334 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 33318-33334 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 33318-33334 comprises the nucleotide sequence that is selected from SEQ ID NO 858,854 or 875.In some this embodiment, the short antisense compounds of the nucleotide 33318-33334 of targeting SEQ ID NO:11 is selected from Isis No 147046,147049 or 147051.
In certain embodiments, the target zone is the nucleotide 33466-33482 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 33466-33482 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 33466-33482 comprises the nucleotide sequence that is selected from SEQ ID NO 858,833 or 875.In some this embodiment, the short antisense compounds of the nucleotide 33466-33482 of targeting SEQ ID NO:11 is selected from Isis No 147046,147047 or 147051.
In certain embodiments, the target zone is the nucleotide 33640-33656 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 33640-33656 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 33640-33656 comprises the nucleotide sequence that is selected from SEQ ID NO 858 or 875.In some this embodiment, the short antisense compounds of the nucleotide 33640-33656 of targeting SEQ ID NO:11 is selected from Isis No 147046 or 147051.
In certain embodiments, the target zone is the nucleotide 33788-33804 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 33788-33804 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 33788-33804 comprises the nucleotide sequence that is selected from SEQ ID NO 858 or 875.In some this embodiment, the short antisense compounds of the nucleotide 33788-33804 of targeting SEQ ID NO:11 is selected from Isis No 147046 or 147051.
In certain embodiments, the target zone is the nucleotide 35437-35449 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 35437-35449 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 35437-35449 comprises the nucleotide sequence that is selected from SEQ ID NO 840 or 861.In some this embodiment, the short antisense compounds of the nucleotide 35437-35449 of targeting SEQ ID NO:11 is selected from Isis No 147059 or 147060.
In certain embodiments, the target zone is the nucleotide 40353-40373 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 40353-40373 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 40353-40373 comprises the nucleotide sequence that is selected from SEQ ID NO 879 or 881.In some this embodiment, the short antisense compounds of the nucleotide 40353-40373 of targeting SEQ ID NO:11 is selected from Isis No 147061 or 147043.
In certain embodiments, the target zone is the nucleotide 42527-42541 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 42527-42541 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 42527-42541 comprises the nucleotide sequence that is selected from SEQ ID NO 885,870 or 844.In some this embodiment, the short antisense compounds of the nucleotide 42527-42541 of targeting SEQ ID NO:11 is selected from Isis No 147031,147032 or 147034.
In certain embodiments, the target zone is the nucleotide 42675-42689 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 42675-42689 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 42675-42689 comprises the nucleotide sequence that is selected from SEQ ID NO 885,870,836 or 844.In some this embodiment, the short antisense compounds of the nucleotide 42675-42689 of targeting SEQ ID NO:11 is selected from Isis No 147031,147032,147033 or 147034.
In certain embodiments, the target zone is the nucleotide 46313-46328 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 46313-46328 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 46313-46328 comprises the nucleotide sequence that is selected from SEQ ID NO 839,830,840 or 879.In some this embodiment, the short antisense compounds of the nucleotide 46313-46328 of targeting SEQ ID NO:11 is selected from Isis No 147057,147058,147059 or 147061.
In certain embodiments, the target zone is the nucleotide 46461-46476 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 46461-46476 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 46461-46476 comprises the nucleotide sequence that is selected from SEQ ID NO 839,840 or 879.In some this embodiment, the short antisense compounds of the nucleotide 46461-46476 of targeting SEQ ID NO:11 is selected from Isis No 147057,147059 or 147061.
In certain embodiments, the target zone is the nucleotide 48369-48381 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 48369-48381 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 48369-48381 comprises the nucleotide sequence that is selected from SEQ ID NO 842 or 845.In some this embodiment, the short antisense compounds of the nucleotide 48369-48381 of targeting SEQ ID NO:11 is selected from Isis No 147073 or 147074.
In certain embodiments, the target zone is the nucleotide 48714-48726 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 48714-48726 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 48714-48726 comprises the nucleotide sequence that is selected from SEQ ID NO 843 or 846.In some this embodiment, the short antisense compounds of the nucleotide 48714-48726 of targeting SEQ ID NO:11 is selected from Isis No 147027 or 147028.
In certain embodiments, the target zone is the nucleotide 49050-49062 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 49050-49062 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 49050-49062 comprises the nucleotide sequence that is selected from SEQ ID NO 876 or 838.In some this embodiment, the short antisense compounds of the nucleotide 49050-49062 of targeting SEQ ID NO:11 is selected from Isis No 147067 or 147068.
In certain embodiments, the target zone is the nucleotide 49672-49684 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 49672-49684 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 49672-49684 comprises the nucleotide sequence that is selected from SEQ ID NO 842 or 845.In some this embodiment, the short antisense compounds of the nucleotide 49672-49684 of targeting SEQ ID NO:11 is selected from Isis No 147073 or 147074.
In certain embodiments, the target zone is the nucleotide 52292-52304 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 52292-52304 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 52292-52304 comprises the nucleotide sequence that is selected from SEQ ID NO 849 or 863.In some this embodiment, the short antisense compounds of the nucleotide 52292-52304 of targeting SEQ ID NO:11 is selected from Isis No 147036 or 147037.
In certain embodiments, the target zone is the nucleotide 52438-52450 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 52438-52450 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 52438-52450 comprises the nucleotide sequence that is selected from SEQ ID NO 849 or 863.In some this embodiment, the short antisense compounds of the nucleotide 52438-52450 of targeting SEQ ID NO:11 is selected from Isis No 147036 or 147037.
In certain embodiments, the target zone is the nucleotide 53445-53458 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 53445-53458 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 53445-53458 comprises the nucleotide sequence that is selected from SEQ ID NO 866,881 or 869.In some this embodiment, the short antisense compounds of the nucleotide 53445-53458 of targeting SEQ ID NO:11 is selected from Isis No 147042,147043 or 147044.
In certain embodiments, the target zone is the nucleotide 53591-53604 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 53591-53604 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 53591-53604 comprises the nucleotide sequence that is selected from SEQ ID NO 866,874,881,885 or 869.In some this embodiment, the short antisense compounds of the nucleotide 53591-53604 of targeting SEQ ID NO:11 is selected from Isis No 147042,147030,147043,147031 or 147044.
In certain embodiments, the target zone is the nucleotide 53738-53750 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 53738-53750 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 53738-53750 comprises the nucleotide sequence that is selected from SEQ ID NO 874 or 885.In some this embodiment, the short antisense compounds of the nucleotide 53738-53750 of targeting SEQ ID NO:11 is selected from Isis No 147030 or 147031.
In certain embodiments, the target zone is the nucleotide 53783-53795 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 53783-53795 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 53783-53795 comprises the nucleotide sequence that is selected from SEQ ID NO 864 or 834.In some this embodiment, the short antisense compounds of the nucleotide 53783-53795 of targeting SEQ ID NO:11 is selected from Isis No 147040 or 147041.
In certain embodiments, the target zone is the nucleotide 55008-55020 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 55008-55020 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 55008-55020 comprises the nucleotide sequence that is selected from SEQ ID NO 866 or 881.In some this embodiment, the short antisense compounds of the nucleotide 55008-55020 of targeting SEQ ID NO:11 is selected from Isis No 147042 or 147043.
In certain embodiments, the target zone is the nucleotide 55154-55166 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 55154-55166 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 55154-55166 comprises the nucleotide sequence that is selected from SEQ ID NO 866 or 881.In some this embodiment, the short antisense compounds of the nucleotide 55154-55166 of targeting SEQ ID NO:11 is selected from Isis No 147042 or 147043.
In certain embodiments, the target zone is the nucleotide 55682-55695 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 55682-55695 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 55682-55695 comprises the nucleotide sequence that is selected from SEQ ID NO 877 or 882.In some this embodiment, the short antisense compounds of the nucleotide 55682-55695 of targeting SEQ ID NO:11 is selected from Isis No 147019 or 147021.
In certain embodiments, the target zone is the nucleotide 56275-56293 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 56275-56293 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 56275-56293 comprises the nucleotide sequence that is selected from SEQ ID NO 871,884,887,830,840,861 or 879.In some this embodiment, the short antisense compounds of the nucleotide 56275-56293 of targeting SEQ ID NO:11 is selected from Isis No 147054,147055,147056,147058,147059,147060 or 147061.
In certain embodiments, the target zone is the nucleotide 56418-56439 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 56418-56439 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 56418-56439 comprises the nucleotide sequence that is selected from SEQ ID NO 875,829,871,884,887,839,830 or 879.In some this embodiment, the short antisense compounds of the nucleotide 56418-56439 of targeting SEQ ID NO:11 is selected from Isis No 147051,147053,147054,147055,147056,147057,147058 or 147061.
In certain embodiments, the target zone is the nucleotide 57264-57276 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 57264-57276 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 57264-57276 comprises the nucleotide sequence that is selected from SEQ ID NO 883 or 858.In some this embodiment, the short antisense compounds of the nucleotide 57264-57276 of targeting SEQ ID NO:11 is selected from Isis No 147045 or 147046.
In certain embodiments, the target zone is the nucleotide 61276-61293 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 61276-61293 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 61276-61293 comprises the nucleotide sequence that is selected from SEQ ID NO 856,847,849,863,855,850 or 864.In some this embodiment, the short antisense compounds of the nucleotide 61276-61293 of targeting SEQ ID NO:11 is selected from Isis No 147071,147035,147036,147037,147038,147039 or 147040.
In certain embodiments, the target zone is the nucleotide 61257-61320 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 61257-61320 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 61257-61320 comprises the nucleotide sequence that is selected from SEQ ID NO 881,856,847,849,863,855,850,864 or 886.In some this embodiment, the short antisense compounds of the nucleotide 61257-61320 of targeting SEQ IDNO:11 is selected from Isis No 147043,147071,147035,147036,147037,147038,147039,147040 or 147071.
In certain embodiments, the target zone is the nucleotide 61422-61439 of SEQ ID NO:11.11. lack in certain embodiments, the nucleotide 61422-61439 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 61422-61439 comprises the nucleotide sequence that is selected from SEQ ID NO 844,847,849,863,855 or 864.In some this embodiment, the short antisense compounds of the nucleotide 61422-61439 of targeting SEQ IDNO:11 is selected from Isis No 147034,147035,147036,147037,147038 or 147040.
In certain embodiments, the target zone is the nucleotide 61422-61466 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 61422-61466 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 61422-61466 comprises the nucleotide sequence that is selected from SEQ ID NO 844,847,849,863,855,864 or 856.In some this embodiment, the short antisense compounds of the nucleotide 61422-61466 of targeting SEQ ID NO:11 is selected from Isis No 147034,147035,147036,147037,147038,147040 or 147071.
In certain embodiments, the target zone is the nucleotide 63065-63078 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 63065-63078 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 63065-63078 comprises the nucleotide sequence that is selected from SEQ ID NO 851 or 838.In some this embodiment, the short antisense compounds of the nucleotide 63065-63078 of targeting SEQ ID NO:11 is selected from Isis No 147066 or 147068.
In certain embodiments, the target zone is the nucleotide 63207-63222 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 63207-63222 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 63207-63222 comprises the nucleotide sequence that is selected from SEQ ID NO 841 or 851.In some this embodiment, the short antisense compounds of the nucleotide 63207-63222 of targeting SEQ ID NO:11 is selected from Isis No 147062 or 147066.
In certain embodiments, the target zone is the nucleotide 64538-64550 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 64538-64550 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 64538-64550 comprises the nucleotide sequence that is selected from SEQ ID NO 849 or 863.In some this embodiment, the short antisense compounds of the nucleotide 64538-64550 of targeting SEQ ID NO:11 is selected from Isis No 147036 or 147037.
In certain embodiments, the target zone is the nucleotide 64864-64876 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 64864-64876 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 64864-64876 comprises the nucleotide sequence that is selected from SEQ ID NO 851 or 876.In some this embodiment, the short antisense compounds of the nucleotide 64864-64876 of targeting SEQ ID NO:11 is selected from Isis No 147066 or 147067.
In certain embodiments, the target zone is the nucleotide 65010-65028 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 65010-65028 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 65010-65028 comprises the nucleotide sequence that is selected from SEQ ID NO 851,876 or 883.In some this embodiment, the short antisense compounds of the nucleotide 65010-65028 of targeting SEQ ID NO:11 is selected from Isis No 147066,147067 or 147045.
In certain embodiments, the target zone is the nucleotide 65163-65175 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 65163-65175 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 65163-65175 comprises the nucleotide sequence that is selected from SEQ ID NO 883 or 858.In some this embodiment, the short antisense compounds of the nucleotide 65163-65175 of targeting SEQ ID NO:11 is selected from Isis No 147045 or 147046.
In certain embodiments, the target zone is the nucleotide 65408-65422 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 65408-65422 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 65408-65422 comprises the nucleotide sequence that is selected from SEQ ID NO 883 or 856.In some this embodiment, the short antisense compounds of the nucleotide 65408-65422 of targeting SEQ ID NO:11 is selected from Isis No 147068 or 147071.
In certain embodiments, the target zone is the nucleotide 65549-65568 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 65549-65568 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 65549-65568 comprises the nucleotide sequence that is selected from SEQ ID NO 860,838 or 856.In some this embodiment, the short antisense compounds of the nucleotide 65549-65568 of targeting SEQ ID NO:11 is selected from Isis No 147069,147068 or 147071.
In certain embodiments, the target zone is the nucleotide 67741-67754 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 67741-67754 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 67741-67754 comprises the nucleotide sequence that is selected from SEQ ID NO 848,874 or 885.In some this embodiment, the short antisense compounds of the nucleotide 67741-67754 of targeting SEQ ID NO:11 is selected from Isis No 147029,147030 or 147031.
In certain embodiments, the target zone is the nucleotide 67886-67900 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 67886-67900 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 67886-67900 comprises the nucleotide sequence that is selected from SEQ ID NO 846,848,874 or 885.In some this embodiment, the short antisense compounds of the nucleotide 67886-67900 of targeting SEQ ID NO:11 is selected from Isis No 147028,147029,147030 or 147031.
In certain embodiments, the target zone is the nucleotide 68867-68880 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 68867-68880 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 68867-68880 comprises the nucleotide sequence that is selected from SEQ ID NO 881,869 or 883.In some this embodiment, the short antisense compounds of the nucleotide 68867-68880 of targeting SEQ ID NO:11 is selected from Isis No 147043,147044 or 147045.
In certain embodiments, the target zone is the nucleotide 69013-69532 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 69013-69532 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 69013-69532 comprises the nucleotide sequence that is selected from SEQ ID NO 881,869,883,858,856,832 or 842.In some this embodiment, the short antisense compounds of the nucleotide 69013-69532 of targeting SEQ ID NO:11 is selected from Isis No 147043,147044,147045,147046,147071,147072 or 147073.
In certain embodiments, the target zone is the nucleotide 69665-69880 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 69665-69880 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 69665-69880 comprises the nucleotide sequence that is selected from SEQ ID NO 856,832,842,845 or 851.In some this embodiment, the short antisense compounds of the nucleotide 69665-69880 of targeting SEQ ID NO:11 is selected from Isis No 147071,147072,147073,147074 or 147066.
In certain embodiments, the target zone is the nucleotide 70611-70630 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 70611-70630 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 70611-70630 comprises the nucleotide sequence that is selected from SEQ ID NO 859,841,862,880,857 or 851.In some this embodiment, the short antisense compounds of the nucleotide 70611-70630 of targeting SEQ ID NO:11 is selected from Isis No 147023,147062,147063,147064,147065 or 147066.
In certain embodiments, the target zone is the nucleotide 70762-70776 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 70762-70776 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 70762-70776 comprises the nucleotide sequence that is selected from SEQ ID NO 862,880,857 or 851.In some this embodiment, the short antisense compounds of the nucleotide 70762-70776 of targeting SEQ ID NO:11 is selected from Isis No 147063,147064,147065 or 147066.
In certain embodiments, the target zone is the nucleotide 70998-71010 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 70998-71010 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 70998-71010 comprises the nucleotide sequence that is selected from SEQ ID NO 832 or 842.In some this embodiment, the short antisense compounds of the nucleotide 70998-71010 of targeting SEQ ID NO:11 is selected from Isis No 147072 or 147073.
In certain embodiments, the target zone is the nucleotide 71144-714364 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 71144-714364 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 71144-714364 comprises the nucleotide sequence that is selected from SEQ ID NO 832,842,845,863,855 or 850.In some this embodiment, the short antisense compounds of the nucleotide 71144-714364 of targeting SEQ IDNO:11 is selected from Isis No 147072,147073,147074,147037,147038 or 147039.
In certain embodiments, the target zone is the nucleotide 71497-71652 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 71497-71652 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 71497-71652 comprises the nucleotide sequence that is selected from SEQ ID NO 863,855,850 or 879.In some this embodiment, the short antisense compounds of the nucleotide 71497-71652 of targeting SEQ ID NO:11 is selected from Isis No 147037,147038,147039 or 147061.
In certain embodiments, its length of short antisense compounds of targeting PTP1B nucleic acid is 8-16, preferred 9-15, more preferably 9-14, more preferably 10-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting PTP1B nucleic acid is 9-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting PTP1B nucleic acid is 10-14 nucleotide.In certain embodiments, this short antisense compounds is short antisense oligonucleotide.
In certain embodiments, the short antisense compounds of targeting PTP1B nucleic acid is short gapmer.In some this embodiment, comprise at least one high-affinity in the short gapmer of targeting PTP1B nucleic acid one or more pterions therein and modify.In certain embodiments, the short antisense compounds of targeting PTP1B nucleic acid comprises 1-3 high-affinity modification in each pterion.In some this embodiment, the nucleoside in pterion or nucleotide comprise 2 ' and modify.In some this embodiment, the monomer in pterion is BNA.In some this embodiment, the monomer in pterion is selected from α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA, β-D-methylene oxygen base (4 '-CH2-O-2 ') BNA, ethyleneoxy group (4 '-(CH2)2-O-2 ') BNA, amino oxygen base (4 '-CH2-O-N (R)-2 ') BNA and oxygen base amino (4 '-CH2-N (R)-O-2 ') BNA.In certain embodiments, the monomer in pterion comprises in 2 ' position and is selected from following substituent group: pi-allyl, amino, azido, thio group, O-pi-allyl, O-C1-C10Alkyl ,-OCF3, O-(CH2)2-O-CH3, 2 '-O (CH2)2SCH3, O-(CH2)2-O-N (Rm) (Rn) and O-CH2-C (=O)-N (Rm) (Rn), each R whereinmAnd RnIndependent is H or substituted or unsubstituted C1-C10Alkyl.In certain embodiments, the monomer in pterion is 2 ' MOE nucleotide.
In certain embodiments, the short antisense compounds of targeting PTP1B nucleic acid comprises between 5 ' pterion and 3 ' pterion at interval.In certain embodiments, comprise 5,6,7,8,9,10,11,12,13 or 14 monomers at interval.In certain embodiments, Jian Ge monomer is not modified deoxyribonucleotide.In certain embodiments, Jian Ge monomer is not modified ribonucleotide.In certain embodiments, modify (if any) at interval and cause producing such antisense compounds, when in conjunction with its target nucleic acids, this chemical compound can be supported the cutting of RNA enzyme (including but not limited to RNA enzyme H).
In certain embodiments, the short antisense compounds of targeting PTP1B nucleic acid has the same Dan Julian key.In some this embodiment, these keys all are that thiophosphate connects key.In certain embodiments, Lian Jian is that di-phosphate ester connects key.In certain embodiments, the short antisense compounds of targeting PTP1B nucleic acid has mixed matrix.
In certain embodiments, its length of short antisense compounds of targeting PTP1B nucleic acid is 8 monomers.In certain embodiments, its length of short antisense compounds of targeting PTP1B nucleic acid is 9 monomers.In certain embodiments, its length of short antisense compounds of targeting PTP1B nucleic acid is 10 monomers.In certain embodiments, its length of short antisense compounds of targeting PTP1B nucleic acid is 11 monomers.In certain embodiments, its length of short antisense compounds of targeting PTP1B nucleic acid is 12 monomers.In certain embodiments, its length of short antisense compounds of targeting PTP1B nucleic acid is 13 monomers.In certain embodiments, its length of short antisense compounds of targeting PTP1B nucleic acid is 14 monomers.In certain embodiments, its length of short antisense compounds of targeting PTP1B nucleic acid is 15 monomers.In certain embodiments, its length of short antisense compounds of targeting PTP1B nucleic acid is 16 monomers.In certain embodiments, the short antisense compounds of targeting PTP1B nucleic acid comprises 9-15 monomer.In certain embodiments, the short antisense compounds of targeting PTP1B nucleic acid comprises 10-15 monomer.In certain embodiments, the short antisense compounds of targeting PTP1B nucleic acid comprises 12-14 monomer.In certain embodiments, the short antisense compounds of targeting PTP1B nucleic acid comprises 12-14 nucleotide or nucleoside.
In certain embodiments, the invention provides the method for the expression of regulating PTP1B.In certain embodiments, this method comprises the short antisense compounds that uses one or more targeting PTP1B nucleic acid, and wherein the short antisense compounds of this targeting PTP1B nucleic acid is about 8 to about 16, preferably 9-15, more preferably 9-14, more preferably 10-14 monomer (promptly about 8 monomer to about 16 connections).Those of ordinary skills will appreciate that, this comprises the method that the short antisense compounds that uses one or more 8,9,10,11,12,13,14,15 or 16 monomeric targeting PTP1B nucleic acid is regulated the expression of PTP1B.
In certain embodiments, the method for adjusting PTP1B comprises that using length is the short antisense compounds of 8 monomeric targeting PTP1B nucleic acid.In certain embodiments, the method for adjusting PTP1B comprises that using length is the short antisense compounds of 9 monomeric targeting PTP1B nucleic acid.In certain embodiments, the method for adjusting PTP1B comprises that using length is the short antisense compounds of 10 monomeric targeting PTP1B nucleic acid.In certain embodiments, the method for adjusting PTP1B comprises that using length is the short antisense compounds of 11 monomeric targeting PTP1B nucleic acid.In certain embodiments, the method for adjusting PTP1B comprises that using length is the short antisense compounds of 12 monomeric targeting PTP1B nucleic acid.In certain embodiments, the method for adjusting PTP1B comprises that using length is the short antisense compounds of 13 monomeric targeting PTP1B nucleic acid.In certain embodiments, the method for adjusting PTP1B comprises that using length is the short antisense compounds of 14 monomeric targeting PTP1B nucleic acid.In certain embodiments, the method for adjusting PTP1B comprises that using length is the short antisense compounds of 15 monomeric targeting PTP1B nucleic acid.In certain embodiments, the method for adjusting PTP1B comprises that using length is the short antisense compounds of 16 monomeric targeting PTP1B nucleic acid.
In certain embodiments, the method for the expression of adjusting PTP1B comprises that use comprises the short antisense compounds of 9-15 monomeric targeting PTP1B nucleic acid.In certain embodiments, the method for the expression of adjusting PTP1B comprises that use comprises the short antisense compounds of 10-15 monomeric targeting PTP1B nucleic acid.In certain embodiments, the method for the expression of adjusting PTP1B comprises that use comprises the short antisense compounds of 12-14 monomeric targeting PTP1B nucleic acid.In certain embodiments, the method for the expression of adjusting PTP1B comprises the short antisense compounds that uses the targeting PTP1B nucleic acid that comprises 12-14 nucleotide or nucleoside.
10.PTEN
In certain embodiments, the invention provides the short antisense compounds of the nucleic acid of targeting coding PTEN.In certain embodiments, this chemical compound is used for regulate the PTEN expression of cell.In some this embodiment, give animal with the short antisense compounds of targeting PTEN nucleic acid.In certain embodiments, the short antisense compounds of targeting PTEN nucleic acid can be used for studying PTEN, is used to study some nuclease and/or is used to assess the antisense activity.In some this embodiment, the short antisense compounds of targeting PTEN nucleic acid can be used for assessing some die body and/or chemical modification.In certain embodiments, the short antisense compounds of targeting PTEN nucleic acid being given animal can cause measurable phenotype to change.
The short antisense compounds of targeting PTEN can have short antisense compounds characteristic or feature any or that multiple this paper summarized.In certain embodiments, the short antisense compounds of targeting PTP1B nucleic acid has and is selected from following die body (pterion-deoxidation interval-pterion): 1-12-1,1-1-10-2,2-10-1-1,3-10-3,2-10-3,2-10-2,1-10-1,1-10-2,3-8-3,2-8-2,1-8-1,3-6-3 or 1-6-1, more preferably 1-10-1,2-10-2,3-10-3 and 1-9-2.
The short antisense compounds of some targeting PTEN nucleic acid
In certain embodiments, lacking the antisense compounds targeting has
The PTEN nucleic acid of the sequence of searching number No.NM_000314.4 (being incorporated herein) with SEQ ID NO:14.In certain embodiments, lacking the antisense compounds targeting has

The PTEN nucleic acid of the sequence of the nucleotide 8063255-8167140 of the sequence of searching number No.NT_033890.3 (being incorporated herein) with SEQ ID NO:15.In some this embodiment, short antisense compounds and the SEQ ID NO:14 of targeting SEQ ID NO:14 have at least 90% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:14 of targeting SEQ ID NO:14 have at least 95% complementarity.In some this embodiment, the short antisense compounds of targeting SEQID NO:14 and SEQ ID NO:14 have 100% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:15 of targeting SEQ ID NO:15 have at least 90% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:15 of targeting SEQ ID NO:15 have at least 95% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:15 of targeting SEQ ID NO:15 have 100% complementarity.
In certain embodiments, the short antisense compounds of targeting SEQ ID NO:14 comprises the nucleotide sequence that is selected from the nucleotide sequence that provides in table 20 and 21.In certain embodiments, the short antisense compounds of targeting SEQ ID NO:15 comprises the nucleotide sequence that is selected from the nucleotide sequence that provides in table 22 and 23.
Each nucleotide sequence that provides in the table 20,21,22 and 23 is independent of any to connecting the modification of key or nuclear base between sugar moieties, nucleoside.Thus, the short antisense compounds that comprises the nucleotide sequence that provides in the table 20,21,22 and 23 can comprise one or more to connecting the modification of key or nuclear base between sugar moieties, nucleoside independently.Isis number (Isis NO.) described antisense compounds represented the nuclear base sequence with one or more to connecting key between sugar moieties, nucleoside or examining the combination of the modification of base.
Table 20 has been enumerated the short antisense compounds that 100% complementarity is arranged with SEQ ID NO:14.Table 22 has been enumerated the short antisense compounds that 100% complementarity is arranged with SEQ ID NO:15.The file that is marked with " gapmer die body " is represented the pterion of each short antisense compounds-at interval-pterion die body.Spacer segment comprises 2 '-deoxyribonucleotide, and each nucleotide of each pterion section comprises the sugar through 2 '-modification.The concrete sugar through 2 '-modification is also represented in " gapmer die body " file.For example, " 2-10-2MOE " means the 2-10-2gapmer die body, and wherein the spacer segment both sides of 10 2 '-deoxyribonucleotides are connected to the pterion section of 2 nucleotide, and wherein the nucleotide of pterion section is 2 '-MOE nucleotide.Connecting key between nucleoside is thiophosphate.Short antisense compounds comprises the 5-methylcytidine that substitutes not modified cytosine, unless show " not modified cytosine " in the gapmer die body file, represented in this case cytosine is not modified cytosine.For example, " 5-mC is only in the interval " expression spacer segment has the 5-methylcytidine, and the pterion section has not modified cytosine.
Nucleotide and abbreviation thereof through 2 '-modification comprise: 2 '-O-methoxy ethyl (MOE); 2 '-O-methyl (OMe); 2 '-O-(2,2,3,3,3-five fluoropropyls) (PentaF); 2 '-O-[(2-methoxyl group) ethyl]-4 '-sulfo-(2 '-MOE-4 '-sulfo-); (R)-CMOE-BNA.Shown in table 20 and 22, the pterion can include 2 ' the substituent monomer that comprises above a type.For example, 1-2-10-2MOE/PentaF/MOE represents that a nucleotide of modifying through MOE connects the interval that two nucleotide of modifying through PentaF connect 10 deoxyribonucleotides again and connects two nucleotide of modifying through PentaF again.For example, 1-1-10-22 '-(butyl acetamido)-palmitamide methylene oxygen base BNA/ methylene oxygen base BNA represents that 5 '-least significant end nucleotide is 2 '-(butyl acetamide)-palmitamide, second nucleotide is methylene oxygen base BNA nucleotide, and 3 ' pterion is methylene oxygen base BNA.Unless otherwise, otherwise cytosine is a 5-methylcytosine, and connecting key between nucleoside is thiophosphate.
Table 20: the short antisense compounds of targeting SEQ ID NO:14
| ISISNo | 5 ' target site | 3 ' target site | Sequence (5 '-3 ') | The Gapmer die body | SEQID NO |
| 390092 | 5530 | 5541 | AGAATGAGACTT | 1-10-1MOE | 1514 |
| 390091 | 5435 | 5446 | TGAGGCATTATC | 1-10-1MOE | 1522 |
| 390090 | 5346 | 5357 | AGAGTATCTGAA | 1-10-1MOE | 1227 |
| 390088 | 5162 | 5173 | CACATTAACAGT | 1-10-1MOE | 1511 |
| 390087 | 5126 | 5137 | GTGGCAACCACA | 1-10-1MOE | 1501 |
| 390085 | 5031 | 5042 | ATTTGATGCTGC | 1-10-1MOE | 1505 |
| 390084 | 4982 | 4993 | CAAAGAATGGTG | 1-10-1MOE | 1215 |
| 390082 | 4910 | 4921 | AGGACTTGGGAT | 1-10-1MOE | 1503 |
| 390080 | 4833 | 4844 | TGCTGCA CATCC | 1-10-1MOE | 1150 |
| 392067 | 4832 | 4845 | CTGCTGCACATCCA | Cytosine in the 2-10-2 methylene oxygen base BNA interval is not modified | 1510 |
| 390078 | 4714 | 4725 | CTTTCAGTCATA | 1-10-1MOE | 1520 |
| 390077 | 4693 | 4704 | GTCAAATTCTAT | 1-10-1MOE | 1252 |
| 390076 | 4599 | 4610 | TTCCAATGACTA | 1-10-1MOE | 1506 |
| 390075 | 4576 | 4587 | GTAAGCAAGGCT | 1-10-1MOE | #N/A |
| 390074 | 4533 | 4544 | ACCCTCATTCAG | 1-10-1MOE | 1513 |
| 390068 | 4191 | 4202 | GTAAATCCTAAG | 1-10-1MOE | 1515 |
| 390064 | 4001 | 4012 | ACCACAGCTAGT | 1-10-1MOE | 1498 |
| 390063 | 3977 | 3988 | CACCAATAAGTT | 1-10-1MOE | 1219 |
| 390058 | 3828 | 3839 | AGTAGTTGTACT | 1-10-1MOE | 1192 |
| 390056 | 3793 | 3804 | GGGCATATCAAA | 1-10-1MOE | 1521 |
| 390054 | 3705 | 3716 | AACACTGCACAT | 1-10-1MOE | 1493 |
| 390052 | 3623 | 3634 | GACAATTTCTAC | 1-10-1MOE | 1492 |
| 390050 | 3503 | 3514 | GTATTCAAGTAA | 1-10-1MOE | 1140 |
| 390049 | 3479 | 3490 | GTTAATGACATT | 1-10-1MOE | 1491 |
| 390047 | 3428 | 3439 | TGTGTAAGGTCA | 1-10-1MOE | 1490 |
| 390041 | 3175 | 3186 | TTAGCACTGGCC | 1-10-1MOE | 1489 |
| 398076 | 3171 | 3182 | CACTGGCCTTGA | 1-10-1MOE | 1488 |
| 398009 | 3170 | 3183 | GCACTGGCCTTGAT | 2-10-2MOE | 1487 |
| 398075 | 3111 | 3122 | AAATCATTGTCA | 1-10-1MOE | 1233 |
| 398008 | 3110 | 3123 | TAAATCATTGTCAA | 2-10-2MOE | 1486 |
| 398074 | 2913 | 2924 | GCACCAATATGC | 1-10-1MOE | 1248 |
| 398007 | 2912 | 2925 | AGCACCAATATGCT | 2-10-2MOE | 1247 |
| 398073 | 2681 | 2692 | TTAGCCAACTGC | 1-10-1MOE | 1485 |
| 398006 | 2680 | 2693 | CTTAGCCAACTGCA | 2-10-2MOE | 1484 |
| 390033 | 2679 | 2690 | AGCCAACTGCAA | 1-10-1MOE | 1483 |
| 398072 | 2671 | 2682 | GCAAACTTATCT | 1-10-1MOE | 1482 |
| 398005 | 2670 | 2683 | TGCAAACTTATCTG | 2-10-2MOE | 1481 |
| 390030 | 2534 | 2545 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 398071 | 2533 | 2544 | TTATAAAACTGG | 1-10-1MOE | 1480 |
| 398004 | 2532 | 2545 | TTTATAAAACTGGA | 2-10-2MOE | 1479 |
| 390029 | 2510 | 2521 | AAAGTGCCATCT | 1-10-1MOE | 1478 |
| 390028 | 2491 | 2502 | TCCTAATTGAAT | 1-10-1MOE | 1477 |
| 398070 | 2481 | 2492 | ATTTTAAATGTC | 1-10-1MOE | 1476 |
| 398003 | 2480 | 2493 | AATTTTAAATGTCC | 2-10-2MOE | 1475 |
| 390027 | 2455 | 2466 | AGGTATATACAT | 1-10-1MOE | 1206 |
| 398069 | 2451 | 2462 | ATATACATGACA | 1-10-1MOE | 1474 |
| 398002 | 2450 | 2463 | TATATACATGACAC | 2-10-2MOE | 1473 |
| 398068 | 2440 | 2451 | ACAGCTACACAA | 1-10-1MOE | 1472 |
| 398001 | 2439 | 2452 | CACAGCTACACAAC | 2-10-2MOE | 1471 |
| 390026 | 2438 | 2449 | AGCTACACAACC | 1-10-1MOE | 1470 |
| 390025 | 2406 | 2417 | GTGTCAAAACCC | 1-10-1MOE | 1211 |
| 398067 | 2405 | 2416 | TGTCAAAACCCT | 1-10-1MOE | 1210 |
| 398000 | 2404 | 2417 | GTGTCAAAACCCTG | 2-10-2MOE | 1469 |
| 398066 | 2372 | 2383 | AGATTGGTCAGG | 1-10-1MOE | 1468 |
| 397999 | 2371 | 2384 | AAGATTGGTCAGGA | 2-10-2MOE | 1467 |
| 398065 | 2349 | 2360 | GTTCCTATAACT | 1-10-1MOE | 1466 |
| 397998 | 2348 | 2361 | TGTTCCTATAACTG | 2-10-2MOE | 1465 |
| 398064 | 2331 | 2342 | CTGACACAATGT | 1-10-1MOE | 1464 |
| 397997 | 2330 | 2343 | TCTGACACAATGTC | 2-10-2MOE | 1463 |
| 398063 | 2321 | 2332 | GTCCTATTGCCA | 1-10-1MOE | 1205 |
| 397996 | 2320 | 2333 | TGTCCTATTGCCAT | 2-10-2MOE | 1462 |
| 390022 | 2286 | 2297 | CAGTTTATTCAA | 1-10-1MOE | 1142 |
| 336221 | 2230 | 2243 | TCAGACTTTTGTAA | 3-8-3MOE | 1461 |
| 336220 | 2224 | 2237 | TTTTGTAATTTGTG | 3-8-3MOE | 1460 |
| 336219 | 2209 | 2222 | ATGCTGATCTTCAT | 3-8-3MOE | 1459 |
| 390021 | 2203 | 2214 | CTTCATCAAAAG | 1-10-1MOE | 1458 |
| 336218 | 2201 | 2214 | CTTCATCAAAAGGT | 3-8-3MOE | 1457 |
| 389779 | 2201 | 2212 | TCATCAAAAGGT | 1-9-2MOE | 1176 |
| 389979 | 2201 | 2212 | TCATCAAAAGGT | 1-10-1MOE | 1176 |
| 397995 | 2200 | 2213 | TTCATCAAAAGGTT | 2-10-2MOE | 1456 |
| 336217 | 2192 | 2205 | AAGGTTCATTCTCT | 3-8-3MOE | 1455 |
| 390020 | 2183 | 2194 | TCTGGATCAGAG | 1-10-1MOE | 1149 |
| 336216 | 2182 | 2195 | CTCTGGATCAGAGT | 3-8-3MOE | 1454 |
| 336215 | 2169 | 2182 | TCAGTGGTGTCAGA | 3-8-3MOE | 1453 |
| 398062 | 2166 | 2177 | GGTGTCAGAATA | 1-10-1MOE | 1255 |
| 397994 | 2165 | 2178 | TGGTGTCAGAATAT | 2-10-2MOE | 1452 |
| 390019 | 2163 | 2174 | GTCAGAATATCT | 1-10-1MOE | 1173 |
| 336214 | 2157 | 2170 | GAATATCTATAATG | 3-8-3MOE | 1573 |
| 398061 | 2151 | 2162 | ATAATGATCAGG | 1-10-1MOE | 1451 |
| 397993 | 2150 | 2163 | TATAATGATCAGGT | 2-10-2MOE | 1450 |
| 336213 | 2146 | 2159 | ATGATCAGGTTCAT | 3-8-3MOE | 1449 |
| 389778 | 2144 | 2155 | TCAGGTTCATTG | 1-9-2MOE | 1448 |
| 389978 | 2144 | 2155 | TCAGGTTCATTG | 1-10-1MOE | 1448 |
| 398060 | 2137 | 2148 | CATTGTCACTAA | 1-10-1MOE | 1447 |
| 336212 | 2136 | 2149 | TCATTGTCACTAAC | 3-8-3MOE | 1446 |
| 397992 | 2136 | 2149 | TCATTGTCACTAAC | 2-10-2MOE | 1446 |
| 336211 | 2112 | 2125 | ACAGAAGTTGAACT | 3-8-3MOE | 1445 |
| 390017 | 2111 | 2122 | GAAGTTGAACTG | 1-10-1MOE | 1444 |
| 398059 | 2108 | 2119 | GTTGAACTGCTA | 1-10-1MOE | 1443 |
| 397991 | 2107 | 2120 | AGTTGAACTGCTAG | 2-10-2MOE | 1442 |
| 336210 | 2104 | 2117 | TGAACTGCTAGCCT | 3-8-3MOE | 1441 |
| 335340 | 2104 | 2118 | TTGAACTGCTAGCCT | 1-10-4MOE | 1440 |
| 335339 | 2103 | 2117 | TGAACTGCTAGCCTC | 1-10-4MOE | 1439 |
| 335338 | 2102 | 2116 | GAACTGCTAGCCTCT | 1-10-4MOE | 1438 |
| 335337 | 2101 | 2115 | AACTGCTAGCCTCTG | 1-10-4MOE | 1437 |
| 335336 | 2100 | 2114 | ACTGCTAGCCTCTGG | 1-10-4MOE | 1436 |
| 390430 | 2099 | 2111 | GCTAGCCTCTGGA | The 1-10-2MOE cytosine is not modified | 1163 |
| 390431 | 2099 | 2111 | GCTAGCCTCTGGA | C is 9-(amino ethoxy) phenoxazine in the not modified pterion of 1-10-2MOE cytosine | 1163 |
| 390432 | 2099 | 2111 | GCTAGCCTCTGGA | 1-10-2MOE | 1163 |
| 390433 | 2099 | 2111 | GCTAGCCTCTGGA | The not modified Nt6 of 1-10-2MOE cytosine is 9-(amino ethoxy) phenoxazine | 1163 |
| 390434 | 2099 | 2111 | GCTAGCCTCTGGA | 1-10-2MOE | 1163 |
| | | | The not modified Nt 7 of cytosine is 9-(amino ethoxy) phenoxazine | |
| 390435 | 2099 | 2111 | GCTAGCCTCTGGA | The not modified Nt9 of 1-10-2MOE cytosine is 9-(amino ethoxy) phenoxazine | 1163 |
| 335335 | 2099 | 2113 | CTGCTAGCCTCTGGA | 1-10-4MOE | 1435 |
| 389777 | 2098 | 2109 | TAGCCTCTGGAT | 1-9-2MOE | 1434 |
| 389954 | 2098 | 2109 | TAGCCTCTGGAT | 1-10-1MOE | 1434 |
| 335334 | 2098 | 2112 | TGCTAGCCTCTGGAT | 1-10-4MOE | 1433 |
| 331429 | 2097 | 2110 | CTAGCCTCTGGATT | 2-10-2MOE | 1431 |
| 335349 | 2097 | 2110 | CTAGCCTCTGGATT | 2-10-2MOE | 1431 |
| 335367 | 2097 | 2110 | CTAGCCTCTGGATT | 2-10-2 methylene oxygen base BNA | 1431 |
| 335378 | 2097 | 2110 | CTAGCCTCTGGATT | 2-10-2 methylene oxygen base BNA | 1431 |
| 392061 | 2097 | 2110 | CTAGCCTCTGGATT | Cytosine in the 2-10-2 methylene oxygen base BNA interval is not modified | 1431 |
| 383991 | 2097 | 2109 | TAGCCTCTGGATT | 1-10-2 2 '-(acetylaminohydroxyphenylarsonic acid butyl-acetamido)-cholesterol/MOE | 1432 |
| 383992 | 2097 | 2109 | TAGCCTCTGGATT | 1-10-2 2 '-(acetylaminohydroxyphenylarsonic acid butyl-acetamido)-cholic acid/MOE | 1432 |
| 386970 | 2097 | 2109 | TAGCCTCTGGATT | 1-10-2MOE | 1432 |
| 390578 | 2097 | 2109 | TAGCCTCTGGATT | T in the not modified pterion of 1-10-2MOE cytosine is the 2-thio-thymine | 1432 |
| 390614 | 2097 | 2109 | TAGCCTCTGGATT | 1-10-2PentaF | 1432 |
| 335333 | 2097 | 2111 | GCTAGCCTCTGGATT | 1-10-4MOE | 1430 |
| 386683 | 2097 | 2109 | TAGCCTCTGGATT | 1-10-22 '-(butyl acetamido)-palmitamide/MOE | 1432 |
| 371975 | 2096 | 2110 | CTAGCCTCTGGATTT | 3-10-2MOE | 1429 |
| 335341 | 2096 | 2111 | GCTAGCCTCTGGATTT | 3-10-3MOE | 1428 |
| 335350 | 2096 | 2111 | GCTAGCCTCTGGATTT | 3-10-3MOE | 1428 |
| 335368 | 2096 | 2111 | GCTAGCCTCTGGATTT | Connect key for di-phosphate ester in the 3-10-3 methylene oxygen base BNA pterion | 1428 |
| 335379 | 2096 | 2111 | GCTAGCCTCTGGATTT | 3-10-3 methylene oxygen base BNA | 1428 |
| 383739 | 2096 | 2111 | GCTAGCCTCTGGATTT | 3-10-3MOE is a 5-methylcytosine in the interval | 1428 |
| 384071 | 2096 | 2111 | GCTAGCCTCTGGATTT | 3-10-3OMe | 1428 |
| | | | At interval is 5-methylcytosine | |
| 384073 | 2096 | 2111 | GCTAGCCTCTGGATTT | 3-10-3 methylene oxygen base BNA is a 5-methylcytosine in the interval | 1428 |
| 390576 | 2096 | 2111 | GCTAGCCTCTGGATTT | 3-10-3MOE at interval in for the T in the 5-methylcytosine pterion be the 2-thio-thymine | 1428 |
| 390580 | 2096 | 2111 | GCTAGCCTCTGGATTT | Pyrimidine in the 3-10-3MOE pterion is that the cytosine in the 5-thiazole interval is not modified | 1428 |
| 390581 | 2096 | 2111 | GCTAGCCTCTGGATTT | Cytosine in the 3-10-3MOE interval is not modified | 1428 |
| 391863 | 2096 | 2111 | GCTAGCCTCTGGATTT | The 3-10-3MOE cytosine is not modified | 1428 |
| 391864 | 2096 | 2111 | GCTAGCCTCTGGATTT | Cytosine in the 3-10-3 methylene oxygen base BNA interval is not modified | 1428 |
| 391865 | 2096 | 2111 | GCTAGCCTCTGGATTT | 3-10-3 methylene oxygen base BNA cytosine is not modified | 1428 |
| 375560 | 2096 | 2110 | CTAGCCTCTGGATTT | 2-10-3MOE | 1429 |
| 391172 | 2096 | 2110 | CTAGCCTCTGGATTT | Methylene oxygen base BNA cytosine is not modified | 1429 |
| 391175 | 2096 | 2110 | CTAGCCTCTGGATTT | 2-10-3 methylene oxygen base BNA | 1429 |
| 391449 | 2096 | 2110 | CTAGCCTCTGGATTT | The 2-10-3MOE cytosine is not modified | 1429 |
| 392054 | 2096 | 2110 | CTAGCCTCTGGATTT | Cytosine in the 2-10-3 methylene oxygen base BNA interval is not modified | 1429 |
| 392055 | 2096 | 2110 | CTAGCCTCTGGATTT | Cytosine in the 2-10-3MOE interval is not modified | 1429 |
| 362977 | 2096 | 2111 | GCTAGCCTCTGGATTT | 2-12-2MOE | 1428 |
| 386770 | 2096 | 2109 | TAGCCTCTGGATTT | 1-11-2MOE | 1427 |
| 390577 | 2096 | 2109 | TAGCCTCTGGATTT | T in the not modified pterion of 1-10-3MOE cytosine is the 2-thio-thymine | 1427 |
| 335332 | 2096 | 2110 | CTAGCCTCTGGATTT | 1-10-4MOE | 1429 |
| 390579 | 2096 | 2111 | GCTAGCCTCTGGATTT | 1-1-1-10-3 MOE/4 '-sulfo- | 1428 |
| | | | / 2 '-O-[(2-methoxyl group) ethyl]-4 '-sulfo-/2 '-O-[(2-methoxyl group) ethyl] connect key for di-phosphate ester in the not modified pterion of cytosine in-4 '-sulfo-pterion | |
| 391173 | 2096 | 2110 | CTAGCCTCTGGATTT | 2-10-3 (5 ' R)-5 '-methyl-methylene oxygen base BNA cytosine is not modified | 1429 |
| 391174 | 2096 | 2110 | CTAGCCTCTGGATTT | 2-10-3 (5 ' S)-5 '-methyl-methylene oxygen base BNA cytosine is not modified | 1429 |
| 390607 | 2096 | 2111 | GCTAGCCTCTGGATTT | Cytosine in the 3-10-3MOE/pentaF pterion is not modified | 1428 |
| 390609 | 2096 | 2111 | GCTAGCCTCTGGATTT | Cytosine in the 3-10-2-1 MOE/MOE/pentaF pterion is not modified | 1428 |
| 384072 | 2096 | 2111 | GCTAGCCTCTGGATTT | Cytosine in the 1-2-10-3 MOE/pentaF/pentaF pterion is not modified | 1428 |
| 390606 | 2096 | 2111 | GCTAGCCTCTGGATTT | Cytosine in the 1-2-10-3 MOE/pentaF/pentaF pterion is not modified | 1428 |
| 390608 | 2096 | 2111 | GCTAGCCTCTGGATTT | Cytosine in the 1-2-10-3 MOE/pentaF/pentaF pterion is not modified | 1428 |
| 391869 | 2096 | 2111 | GCTAGCCTCTGGATTT | 1-2-10-3 methylene oxygen base BNA/ (5 ' S)-5 '-methyl-methylene oxygen base BNA/ (5 ' S)-5 '-methyl-methylene oxygen base BNA cytosine is not modified | 1428 |
| 385036 | 2096 | 2111 | GCTAGCCTCTGGATTT | Cytosine in 1-2-10-3 OMe/2 '-O-methyl-4 '-sulfo-/2 '-O-methyl-4 '-sulfo-pterion is not modified | 1428 |
| 385871 | 2096 | 2111 | GCTAGCCTCTGGATTT | 1-2-10-3OMe/ 2 '-O-[(2-methoxyl group) ethyl]-4 '-sulfo-/2 '-O-[(2-methoxyl group) second | 1428 |
| | | | Base] cytosine in-4 '-sulfo-pterion is not modified | |
| 386682 | 2096 | 2111 | GCTAGCCTCTGGATTT | 1-2-10-32 '-(butyl acetamido)-palmitamide/MOE/MOE | 1428 |
| 390582 | 2096 | 2111 | GCTAGCCTCTGGATTT | 1-2-10-3 MOE/2 '-O-[(2-methoxyl group) ethyl]-4 '-sulfo-/2 '-O-[(2-methoxyl group) ethyl] connect key for di-phosphate ester in the not modified pterion of cytosine in-4 '-sulfo-pterion | 1428 |
| 391868 | 2096 | 2111 | GCTAGCCTCTGGATTT | 1-2-10-3 (5 ' R)-5 '-methyl-methylene oxygen base BNA/ methylene oxygen base BNA/ (5 ' R)-5 '-methyl-methylene oxygen base BNA cytosine is not modified | 1428 |
| 336209 | 2095 | 2108 | AGCCTCTGGATTTG | 3-8-3MOE | 1425 |
| 335331 | 2095 | 2109 | TAGCCTCTGGATTTG | 1-10-4MOE | 1426 |
| 335376 | 2095 | 2109 | TAGCCTCTGGATTTG | 1-10-4 methylene oxygen base BNA | 1426 |
| 335377 | 2095 | 2109 | TAGCCTCTGGATTTG | 1-10-4 methylene oxygen base BNA is a di-phosphate ester in the 3 ' pterion | 1426 |
| 335330 | 2094 | 2108 | AGCCTCTGGATTTGA | 1-10-4MOE | 1424 |
| 336208 | 2079 | 2092 | GGCTCCTCTACTGT | 3-8-3MOE | 1423 |
| 336207 | 2073 | 2086 | TCTACTGTTTTTGT | 3-8-3MOE | 1422 |
| 336206 | 2047 | 2060 | CACCTTAAAATTTG | 3-8-3MOE | 1518 |
| 389776 | 2046 | 2057 | CTTAAAATTTGG | 1-9-2MOE | 1421 |
| 389977 | 2046 | 2057 | CTTAAAATTTGG | 1-10-1MOE | 1421 |
| 397990 | 2045 | 2058 | CCTTAAAATTTGGA | 2-10-2MOE | 1420 |
| 336205 | 2043 | 2056 | TTAAAATTTGGAGA | 3-8-3MOE | 1419 |
| 398058 | 2029 | 2040 | AGTATCGGTTGG | 1-10-1MOE | 1418 |
| 336204 | 2028 | 2041 | AAGTATCGGTTGGC | 3-8-3MOE | 1417 |
| 397989 | 2028 | 2041 | AA GTATCGGTTGGC | 2-10-2MOE | 1417 |
| 336203 | 2002 | 2015 | TGCTTTGTCAAGAT | 3-8-3MOE | 1416 |
| 389775 | 2002 | 2013 | CTTTGTCAAGAT | 1-9-2MOE | 1177 |
| 389976 | 2002 | 2013 | CTTTGTCAAGAT | 1-10-1MOE | 1177 |
| 397988 | 2001 | 2014 | GCTTTGTCAAGATC | 2-10-2MOE | 1415 |
| 336202 | 1959 | 1972 | TCCTTGTCATTATC | 3-8-3MOE | 1414 |
| 389774 | 1945 | 1956 | CACGCTCTATAC | 1-9-2MOE | 1413 |
| 389975 | 1945 | 1956 | CACGCTCTATAC | 1-10-1MOE | 1413 |
| 336201 | 1944 | 1957 | GCACGCTCTATACT | 3-8-3MOE | 1412 |
| 336200 | 1929 | 1942 | CAAATGCTATCGAT | 3-8-3MOE | 1411 |
| 389773 | 1904 | 1915 | AGACTTCCATTT | 1-9-2MOE | 1410 |
| 389974 | 1904 | 1915 | AGACTTCCATTT | 1-10-1MOE | 1410 |
| 336199 | 1902 | 1915 | AGACTTCCATTTTC | 3-8-3MOE | 1409 |
| 336198 | 1884 | 1897 | TTTTCTGAGGTTTC | 3-8-3MOE | 1408 |
| 398057 | 1878 | 1889 | GGTTTCCTCTGG | 1-10-1MOE | 1407 |
| 397987 | 1877 | 1890 | AGGTTTCCTCTGGT | 2-10-2MOE | 1406 |
| 336197 | 1873 | 1886 | TTCCTCTGGTCCTG | 3-8-3MOE | 1405 |
| 390015 | 1868 | 1879 | GGTCCTGGTATG | 1-10-1MOE | 1404 |
| 398056 | 1865 | 1876 | CCTGGTATGAAG | 1-10-1MOE | 1403 |
| 336196 | 1864 | 1877 | TCCTGGTATGAAGA | 3-8-3MOE | 1402 |
| 397986 | 1864 | 1877 | TCCTGGTATGAAGA | 2-10-2MOE | 1402 |
| 398055 | 1849 | 1860 | TATTTACCCAAA | 1-10-1MOE | 1401 |
| 397985 | 1848 | 1861 | GTATTTACCCAAAA | 2-10-2MOE | 1400 |
| 336195 | 1847 | 1860 | TATTTACCCAAAAG | 3-8-3MOE | 1399 |
| 389772 | 1846 | 1857 | TTACCCAAAAGT | 1-9-2MOE | 1398 |
| 389973 | 1846 | 1857 | TTACCCAAAAGT | 1-10-1MOE | 1398 |
| 336194 | 1838 | 1851 | AAAAGTGAAACATT | 3-8-3MOE | 1145 |
| 398054 | 1836 | 1847 | GTGAAACATTTT | 1-10-1MOE | 1144 |
| 397984 | 1835 | 1848 | AGTGAAACATTTTG | 2-10-2MOE | 1397 |
| 336193 | 1828 | 1841 | CATTTTGTCCTTTT | 3-8-3MOE | 1182 |
| 336192 | 1810 | 1823 | CATCTTGTTCTGTT | 3-8-3MOE | 1396 |
| 336191 | 1800 | 1813 | TGTTTGTGGAAGAA | 3-8-3MOE | 1395 |
| 398053 | 1796 | 1807 | TGGAAGAACTCT | 1-10-1MOE | 1394 |
| 397983 | 1795 | 1808 | GTGGAAGAACTCTA | 2-10-2MOE | 1393 |
| 389771 | 1794 | 1805 | GAAGAACTCTAC | 1-9-2MOE | 1392 |
| 389972 | 1794 | 1805 | GAAGAACTCTAC | 1-10-1MOE | 1392 |
| 336190 | 1789 | 1802 | GAACTCTACTTTGA | 3-8-3MOE | 1391 |
| 336189 | 1773 | 1786 | TCACCACACACAGG | 3-8-3MOE | 1390 |
| 336188 | 1754 | 1767 | GCTGAGGGAACTCA | 3-8-3MOE | 1389 |
| 398052 | 1751 | 1762 | GGGAACTCAAAG | 1-10-1MOE | 1388 |
| 389770 | 1750 | 1761 | GGAACTCAAAGT | 1-9-2MOE | 1386 |
| 389971 | 1750 | 1761 | GGAACTCAAAGT | 1-10-1MOE | 1386 |
| 397982 | 1750 | 1763 | AGGGAACTCAAAGT | 2-10-2MOE | 1387 |
| 336187 | 1747 | 1760 | GAACTCAAAGTACA | 3-8-3MOE | 1385 |
| 390012 | 1745 | 1756 | TCAAAGTACATG | 1-10-1MOE | 1384 |
| 336186 | 1688 | 1701 | TCTTCACCTTTAGC | 3-8-3MOE | 1383 |
| 398051 | 1684 | 1695 | CCTTTAGCTGGC | 1-10-1MOE | 1220 |
| 397981 | 1683 | 1696 | ACCTTTAGCTGGCA | 2-10-2MOE | 1382 |
| 336185 | 1677 | 1690 | AGCTGGCAGACCAC | 3-8-3MOE | 1381 |
| 389769 | 1676 | 1687 | TGGCAGACCACA | 1-9-2MOE | 1249 |
| 389970 | 1676 | 1687 | TGGCAGACCACA | 1-10-1MOE | 1249 |
| 392060 | 1675 | 1688 | CTGGCAGACCACAA | Cytosine in the 2-10-2 methylene oxygen base BNA interval is not modified | 1380 |
| 398050 | 1672 | 1683 | AGACCACAAACT | 1-10-1MOE | 1379 |
| 397980 | 1671 | 1684 | CAGACCACAAACTG | 2-10-2MOE | 1378 |
| 390011 | 1658 | 1669 | GGATTGCAAGTT | 1-10-1MOE | 1238 |
| 336184 | 1655 | 1668 | GATTGCAAGTTCCG | 3-8-3MOE | 1508 |
| 336183 | 1644 | 1657 | CCGCCACTGAACAT | 3-8-3MOE | 1377 |
| 390010 | 1643 | 1654 | CCACTGAACATT | 1-10-1MOE | 1240 |
| 398049 | 1641 | 1652 | ACTGAACATTGG | 1-10-1MOE | 1376 |
| 397979 | 1640 | 1653 | CACTGAACATTGGA | 2-10-2MOE | 1375 |
| 336182 | 1633 | 1646 | CATTGGAATAGTTT | 3-8-3MOE | 1374 |
| 389768 | 1630 | 1641 | GAATAGTTTCAA | 1-9-2MOE | 1373 |
| 389969 | 1630 | 1641 | GAATAGTTTCAA | 1-10-1MOE | 1373 |
| 398048 | 1626 | 1637 | AGTTTCAAACAT | 1-10-1MOE | 1372 |
| 397978 | 1625 | 1638 | TAGTTTCAAACATC | 2-10-2MOE | 1371 |
| 336181 | 1623 | 1636 | GTTTCAAACATCAT | 3-8-3MOE | 1370 |
| 398047 | 1614 | 1625 | CATCTTGTGAAA | 1-10-1MOE | 1369 |
| 336180 | 1613 | 1626 | TCATCTTGTGAAAC | 3-8-3MOE | 1368 |
| 390009 | 1613 | 1624 | ATCTTGTGAAAC | 1-10-1MOE | 1175 |
| 397977 | 1613 | 1626 | TCATCTTGTGAAAC | 2-10-2MOE | 1368 |
| 390007 | 1563 | 1574 | CAGGTAGCTATA | 1-10-1MOE | 1367 |
| 336179 | 1561 | 1574 | CAGGTAGCTATAAT | 3-8-3MOE | 1366 |
| 336178 | 1541 | 1554 | CATAGCGCCTCTGA | 3-8-3MOE | 1365 |
| 336177 | 1534 | 1547 | CCTCTGACTGGGAA | 3-8-3MOE | 1364 |
| 389767 | 1534 | 1545 | TCTGACTGGGAA | 1-9-2MOE | 1151 |
| 389968 | 1534 | 1545 | TCTGACTGGGAA | 1-10-1MOE | 1151 |
| 335344 | 1503 | 1516 | TCTCTGGTCCTTAC | 2-10-2MOE | 1363 |
| 335355 | 1503 | 1516 | TCTCTGGTCCTTAC | Connect key for di-phosphate ester in the 2-10-2MOE pterion | 1363 |
| 335370 | 1503 | 1516 | TCTCTGGTCCTTAC | Connect key for di-phosphate ester in the 2-10-2 methylene oxygen base BNA pterion | 1363 |
| 335381 | 1503 | 1516 | TCTCTGGTCCTTAC | 2-10-2 methylene oxygen base BNA | 1363 |
| 335411 | 1503 | 1516 | TCTCTGGTCCTTAC | 2-10-2MOE 3 ' C is a 9-(amino ethoxy) phenoxazine | 1363 |
| 335412 | 1503 | 1516 | TCTCTGGTCCTTAC | C in the 2-10-2MOE 5 ' pterion is a 9-(amino ethoxy) phenoxazine | 1363 |
| 335413 | 1503 | 1516 | TCTCTGGTCCTTAC | C in the 2-10-2MOE pterion is a 9-(amino ethoxy) phenoxazine | 1363 |
| 336176 | 1502 | 1515 | CTCTGGTCCTTACT | 3-8-3MOE | 1361 |
| 335345 | 1502 | 1517 | GTCTCTGGTCCTTACT | 3-10-3MOE | 1362 |
| 335356 | 1502 | 1517 | GTCTCTGGTCCTTACT | Connect key for di-phosphate ester in the 3-10-3MOE pterion | 1362 |
| 335371 | 1502 | 1517 | GTCTCTGGTCCTTACT | Connect key for di-phosphate ester in the 3-10-3 methylene oxygen base BNA pterion | 1362 |
| 335382 | 1502 | 1517 | GTCTCTGGTCCTTACT | 3-10-3 methylene oxygen base BNA | 1362 |
| 335414 | 1502 | 1517 | GTCTCTGGTCCTTACT | C in the 3-10-3MOE 3 ' pterion is a 9-(amino ethoxy) phenoxazine | 1362 |
| 335415 | 1502 | 1517 | GTCTCTGGTCCTTACT | C in the 3-10-3MOE 5 ' pterion is for being 9-(amino ethoxy) | 1362 |
| | | | Phenoxazine | |
| 335416 | 1502 | 1517 | GTCTCTGGTCCTTACT | C in the 3-10-3MOE pterion is a 9-(amino ethoxy) phenoxazine | 1362 |
| 336175 | 1495 | 1508 | CCTTACTTCCCCAT | 3-8-3MOE | 1360 |
| 336174 | 1472 | 1485 | GGGCCTCTTGTGCC | 3-8-3MOE | 1359 |
| 336173 | 1465 | 1478 | TTGTGCCTTTAAAA | 3-8-3MOE | 1358 |
| 398046 | 1465 | 1476 | GTGCCTTTAAAA | 1-10-1MOE | 1199 |
| 389766 | 1464 | 1475 | TGCCTTTAAAAA | 1-9-2MOE | 1217 |
| 389967 | 1464 | 1475 | TGCCTTTAAAAA | 1-10-1MOE | 1217 |
| 397976 | 1464 | 1477 | TGTGCCTTTAAAAA | 2-10-2MOE | 1357 |
| 336172 | 1437 | 1450 | AATAAATATGCACA | 3-8-3MOE | 1356 |
| 398045 | 1423 | 1434 | TCATTACACCAG | 1-10-1MOE | 1355 |
| 336171 | 1422 | 1435 | ATCATTACACCAGT | 3-8-3MOE | 1354 |
| 389765 | 1422 | 1433 | CATTACACCAGT | 1-9-2MOE | 1353 |
| 389966 | 1422 | 1433 | CATTACACCAGT | 1-10-1MOE | 1353 |
| 397975 | 1422 | 1435 | ATCATTACACCAGT | 2-10-2MOE | 1354 |
| 390005 | 1400 | 1411 | CCAGCTTTACAG | 1-10-1MOE | 1352 |
| 336170 | 1392 | 1405 | TTACAGTGAATTGC | 3-8-3MOE | 1351 |
| 398044 | 1382 | 1393 | GCTGCAACATGA | 1-10-1MOE | 1350 |
| 336169 | 1381 | 1394 | TGCTGCAACATGAT | 3-8-3MOE | 1349 |
| 389764 | 1381 | 1392 | CTGCAACATGAT | 1-9-2MOE | 1018 |
| 389965 | 1381 | 1392 | CTGCAACATGAT | 1-10-1MOE | 1018 |
| 397974 | 1381 | 1394 | TGCTGCAACATGAT | 2-10-2MOE | 1349 |
| 336168 | 1362 | 1375 | TCTTCACTTAGCCA | 3-8-3MOE | 1348 |
| 390004 | 1362 | 1373 | TTCACTTAGCCA | 1-10-1MOE | 1208 |
| 336167 | 1353 | 1366 | AGCCATTGGTCAAG | 3-8-3MOE | 1347 |
| 398043 | 1345 | 1356 | CAAGATCTTCAC | 1-10-1MOE | 1244 |
| 336166 | 1344 | 1357 | TCAAGATCTTCACA | 3-8-3MOE | 1346 |
| 390003 | 1344 | 1355 | AAGATCTTCACA | 1-10-1MOE | 1243 |
| 397973 | 1344 | 1357 | TCAAGATCTTCACA | 2-10-2MOE | 1346 |
| 336165 | 1329 | 1342 | AAGGGTTTGATAAG | 3-8-3MOE | 1345 |
| 390002 | 1322 | 1333 | ATAAGTTCTAGC | 1-10-1MOE | 1344 |
| 336164 | 1318 | 1331 | AAGTTCTAGCTGTG | 3-8-3MOE | 1343 |
| 398042 | 1305 | 1316 | TGGGTTATGGTC | 1-10-1MOE | 1214 |
| 336163 | 1304 | 1317 | GTGGGTTATGGTCT | 3-8-3MOE | 1342 |
| 397972 | 1304 | 1317 | GTGGGTTATGGTCT | 2-10-2MOE | 1342 |
| 398089 | 1298 | 1309 | TGGTCTTCAAAA | 1-10-1MOE | 1341 |
| 389763 | 1296 | 1307 | GTCTTCAAAAGG | 1-9-2MOE | 1197 |
| 389964 | 1296 | 1307 | GTCTTCAAAAGG | 1-10-1MOE | 1197 |
| 398041 | 1294 | 1305 | CTTCAAAAGGAT | 1-10-1MOE | 1196 |
| 336162 | 1293 | 1306 | TCTTCAAAAGGATA | 3-8-3MOE | 1340 |
| 397971 | 1293 | 1306 | TCTTCAAAAGGATA | 2-10-2MOE | 1340 |
| 398040 | 1279 | 1290 | GTGCAACTCTGC | 1-10-1MOE | 1236 |
| 336161 | 1278 | 1291 | TGTGCAACTCTGCA | 3-8-3MOE | 1235 |
| 397970 | 1278 | 1291 | TGTGCAACTCTGCA | 2-10-2MOE | 1235 |
| 398039 | 1264 | 1275 | TAAATTTGGCGG | 1-10-1MOE | 1339 |
| 397969 | 1263 | 1276 | TTAAATTTGGCGGT | 2-10-2MOE | 1338 |
| 336160 | 1261 | 1274 | AAATTTGGCGGTGT | 3-8-3MOE | 1337 |
| 336159 | 1253 | 1266 | CGGTGTCATAATGT | 3-8-3MOE | 1336 |
| 398038 | 1252 | 1263 | TGTCATAATGTC | 1-10-1MOE | 1200 |
| 390000 | 1251 | 1262 | GTCATAATGTCT | 1-10-1MOE | 1194 |
| 397968 | 1251 | 1264 | GTGTCATAATGTCT | 2-10-2MOE | 1195 |
| 336158 | 1227 | 1240 | AGATTGTATATCTT | 3-8-3MOE | 1335 |
| 389762 | 1220 | 1231 | ATCTTGTAATGG | 1-9-2MOE | 1334 |
| 389963 | 1220 | 1231 | ATCTTGTAATGG | 1-10-1MOE | 1334 |
| 336157 | 1215 | 1228 | TTGTAATGGTTTTT | 3-8-3MOE | 1333 |
| 336156 | 1202 | 1215 | TATGCTTTGAATCC | 3-8-3MOE | 1332 |
| 389998 | 1199 | 1210 | TTTGAATCCAAA | 1-10-1MOE | 1331 |
| 397967 | 1198 | 1211 | CTTTGAATCCAAAA | 2-10-2MOE | 1330 |
| 336155 | 1190 | 1203 | CCAAAAACCTTACT | 3-8-3MOE | 1500 |
| 336154 | 1176 | 1189 | ACATCATCAATATT | 3-8-3MOE | 1329 |
| 389761 | 1171 | 1182 | CAATATTGTTCC | 1-9-2MOE | 1328 |
| 389962 | 1171 | 1182 | CAATATTGTTCC | 1-10-1MOE | 1328 |
| 398037 | 1170 | 1181 | AATATTGTTCCT | 1-10-1MOE | 1202 |
| 397966 | 1169 | 1182 | CAATATTGTTCCTG | 2-10-2MOE | 1327 |
| 336153 | 1164 | 1177 | TTGTTCCTGTATAC | 3-8-3MOE | 1326 |
| 336152 | 1149 | 1162 | CCTTCAAGTCTTTC | 3-8-3MOE | 1325 |
| 389996 | 1141 | 1152 | TTTCTGCAGGAA | 1-10-1MOE | 1165 |
| 336151 | 1138 | 1151 | TTCTGCAGGAAATC | 3-8-3MOE | 1324 |
| 398036 | 1138 | 1149 | CTGCAGGAAATC | 1-10-1MOE | 1323 |
| 397965 | 1137 | 1150 | TCTGCAGGAAATCC | 2-10-2MOE | 1322 |
| 389760 | 1129 | 1140 | ATCCCATAGCAA | 1-9-2MOE | 1321 |
| 389961 | 1129 | 1140 | ATCCCATAGCAA | 1-10-1MOE | 1321 |
| 398035 | 1126 | 1137 | CCATAGCAATAA | 1-10-1MOE | 1320 |
| 336150 | 1125 | 1138 | CCCATAGCAATAAT | 3-8-3MOE | 1319 |
| 397964 | 1125 | 1138 | CCCATAGCAATAAT | 2-10-2MOE | 1319 |
| 336149 | 1110 | 1123 | TTTGGATAAATATA | 3-8-3MOE | 1496 |
| 389995 | 1106 | 1117 | TAAATATAGGTC | 1-10-1MOE | 1516 |
| 336148 | 1100 | 1113 | TATAGGTCAAGTCT | 3-8-3MOE | 1495 |
| 398034 | 1099 | 1110 | AGGTCAAGTCTA | 1-10-1MOE | 1300 |
| 397963 | 1098 | 1111 | TAGGTCAAGTCTAA | 2-10-2MOE | 1494 |
| 389994 | 1095 | 1106 | CAAGTCTAAGTC | 1-10-1MOE | 1299 |
| 336147 | 1090 | 1103 | GTCTAAGTCGAATC | 3-8-3MOE | 1298 |
| 389993 | 1083 | 1094 | GAATCCATCCTC | 1-10-1MOE | 1297 |
| 336146 | 1080 | 1093 | AATCCATCCTCTTG | 3-8-3MOE | 1296 |
| 398033 | 1077 | 1088 | ATCCTCTTGATA | 1-10-1MOE | 1198 |
| 397962 | 1076 | 1089 | CATCCTCTTGATAT | 2-10-2MOE | 1295 |
| 336145 | 1070 | 1083 | CTTGATATCTCCTT | 3-8-3MOE | 1294 |
| 336144 | 1057 | 1070 | TTTGTTTCTGCTAA | 3-8-3MOE | 1293 |
| 389759 | 1056 | 1067 | GTTTCTGCTAAC | 1-9-2MOE | 1292 |
| 389960 | 1056 | 1067 | GTTTCTGCTAAC | 1-10-1MOE | 1292 |
| 392059 | 1055 | 1068 | TGTTTCTGCTAACG | Cytosine in the 2-10-2 methylene oxygen base BNA interval is not modified | 1291 |
| 336143 | 1044 | 1057 | ACGATCTCTTTGAT | 3-8-3MOE | 1290 |
| 398032 | 1038 | 1049 | TTTGATGATGGC | 1-10-1MOE | 1222 |
| 397961 | 1037 | 1050 | CTTTGATGATGGCT | 2-10-2MOE | 1289 |
| 389992 | 1036 | 1047 | TGATGATGGCTG | 1-10-1MOE | 1288 |
| 336142 | 1032 | 1045 | ATGATGGCTGTCAT | 3-8-3MOE | 1287 |
| 389991 | 1021 | 1032 | TGTCTGGGAGCC | 1-10-1MOE | 1286 |
| 392058 | 1020 | 1033 | ATGTCTGGGAGCCT | Cytosine in the 2-10-2 methylene oxygen base BNA interval is not modified | 1285 |
| 397960 | 1020 | 1033 | ATGTCTGGGAGCCT | 2-10-2MOE | 1285 |
| 389990 | 1007 | 1018 | TGGCTGAAGAAA | 1-10-1MOE | 1284 |
| 397959 | 1006 | 1019 | GTGGCTGAAGAAAA | 2-10-2MOE | 1283 |
| 398031 | 987 | 998 | GAGAGATGGCAG | 1-10-1MOE | 1282 |
| 397958 | 986 | 999 | AGAGAGATGGCAGA | 2-10-2MOE | 1281 |
| 389758 | 983 | 994 | GATGGCAGAAGC | 1-9-2MOE | 1280 |
| 389959 | 983 | 994 | GATGGCAGAAGC | 1-10-1MOE | 1280 |
| 398030 | 976 | 987 | GAAGCTGCTGGT | 1-10-1MOE | 1143 |
| 397957 | 975 | 988 | AGAAGCTGCTGGTG | 2-10-2MOE | 1279 |
| 389989 | 953 | 964 | TTCTGCAGGATG | 1-10-1MOE | 1170 |
| 389757 | 941 | 952 | GAAATGGCTCTG | 1-9-2MOE | 1278 |
| 389958 | 941 | 952 | GAAATGGCTCTG | 1-10-1MOE | 1278 |
| 397956 | 940 | 953 | GGAAATGGCTCTGG | 2-10-2MOE | 1277 |
| 398029 | 931 | 942 | TGGACTTGGCGG | 1-10-1MOE | 1186 |
| 397955 | 930 | 943 | CTGGACTTGGCGGT | 2-10-2MOE | 1276 |
| 398028 | 914 | 925 | GATGCCCCTCGC | 1-10-1MOE | 1275 |
| 397954 | 913 | 926 | TGATGCCCCTCGCT | 2-10-2MOE | 1274 |
| 398027 | 883 | 894 | GGACCGCAGCCG | 1-10-1MOE | 1155 |
| 397953 | 882 | 895 | TGGACCGCAGCCGG | 2-10-2MOE | 1273 |
| 389756 | 874 | 885 | CCGGGTAATGGC | 1-9-2MOE | 1272 |
| 389957 | 874 | 885 | CCGGGTAATGGC | 1-10-1MOE | 1272 |
| 398026 | 867 | 878 | ATGGCTGCTGCG | 1-10-1MOE | 1160 |
| 397952 | 866 | 879 | AATGGCTGCTGCGG | 2-10-2MOE | 1271 |
| 389987 | 848 | 859 | CTGGATGGTTGC | 1-10-1MOE | 1270 |
| 389755 | 806 | 817 | AGAGGCCTGGCA | 1-9-2MOE | 1269 |
| 389956 | 806 | 817 | AGAGGCCTGGCA | 1-10-1MOE | 1269 |
| 389985 | 584 | 595 | ATGGTGACAGGC | 1-10-1MOE | 1268 |
| 398025 | 581 | 592 | GTGACAGGCGAC | 1-10-1MOE | 1267 |
| 397951 | 580 | 593 | GGTGACAGGCGACT | 2-10-2MOE | 1266 |
| 389754 | 312 | 323 | TGCTCACAGGCG | 1-9-2MOE | 1158 |
| 389955 | 312 | 323 | TGCTCACAGGCG | 1-10-1MOE | 1158 |
| 398024 | 231 | 242 | CAGCGGCTCAAC | 1-10-1MOE | 1265 |
| 397950 | 230 | 243 | ACAGCGGCTCAACT | 2-10-2MOE | 1264 |
| 389982 | 205 | 216 | CATGGCTGCAGC | 1-10-1MOE | 1161 |
| 392056 | 204 | 217 | TCATGGCTGCAGCT | 2-10-2 methylene oxygen base BNA | 1263 |
| 394424 | 204 | 217 | TCATGGCTGCAGCT | 2-10-2MOE | 1263 |
| 396007 | 204 | 217 | TCATGGCTGCAGCT | 2-10-2 (R)-CMOE BNA cytosine is not modified | 1263 |
| 396008 | 204 | 217 | TCATGGCTGCAGCT | 2-10-2 (S)-CMOE BNA cytosine is not modified | 1263 |
| 396009 | 204 | 217 | TCATGGCTGCAGCT | 2-10-2 α-L-methylene oxygen base BNA cytosine is not modified | 1263 |
| 396566 | 204 | 217 | TCATGGCTGCAGCT | The amino BNA cytosine of 2-10-2 oxygen base is not modified | 1263 |
| 396567 | 204 | 217 | TCATGGCTGCAGCT | The amino BNA cytosine of 2-10-2N-methyl-oxygen base is not modified | 1263 |
| 396568 | 204 | 217 | TCATGGCTGCAGCT | 2-10-2 (6R)-6-methyl methylene oxygen base BNA | 1263 |
| | | | Cytosine is not modified | |
| 397913 | 204 | 217 | TCATGGCTGCAGCT | Cytosine in the 2-10-2OMe interval is not modified | 1263 |
| 401974 | 204 | 217 | TCATGGCTGCAGCT | The 2-10-2OMe cytosine is not modified | 1263 |
| 403737 | 204 | 217 | TCATGGCTGCAGCT | 2-10-2 methylene oxygen base BNA is a 5-thiazole nucleus base in the pterion | 1263 |
| | | | | |
| 404121 | 204 | 217 | TCATGGCTGCAGCT | 2-10-2 methylene oxygen base BNA is 5-methylcytosine a 3 ' terminal THF thiophosphate in the interval | 1263 |
| 404228 | 204 | 217 | TCATGGCTGCAGCT | It in the 2-10-2 methylene oxygen base BNA interval oppositely dealkalize base (5 '-terminal reverse abasic) of 5-methylcytosine 5 '-end | 1263 |
| 396024 | 204 | 217 | TCATGGCTGCAGCT | 2-10-2 (6 ' S)-6 '-methyl-methylene oxygen base BNA cytosine is not modified | 1263 |
| 396569 | 204 | 217 | TCATGGCTGCAGCT | 2-10-2 (5 ' S)-5 '-methyl-methylene oxygen base BNA cytosine is not modified | 1263 |
| 396577 | 204 | 217 | TCATGGCTGCAGCT | Cytosine in methylene oxygen base BNA/ methylene oxygen base BNA/2 '-(butyl acetamido)-palmitamide/interval is not modified | 1263 |
| 396576 | 204 | 217 | TCATGGCTGCAGCT | Cytosine in 1-1-10-22 '-(butyl acetamido)-palmitamide/methylene oxygen base BNA/ methylene oxygen base BNA interval is not modified | 1263 |
| 398023 | 191 | 202 | CCGAGAGGAGAG | 1-10-1MOE | 1262 |
| 397949 | 190 | 203 | TCCGAGAGGAGAGA | 2-10-2MOE | 1261 |
| 398022 | 126 | 137 | AAGAGTCCCGCC | 1-10-1MOE | 1260 |
| 397948 | 125 | 138 | AAAGAGTCCCGCCA | 2-10-2MOE | 1259 |
Table 22: the short antisense compounds of targeting SEQ ID NO:15
| ISIS No. | 5 ' target site | 3 ' target site | Sequence (5 '-3 ') | The Gapmer die body | SEQ ID NO |
| 397948 | 525 | 538 | AAAGAGTCCCGCCA | 2-10-2MOE | 259 |
| 398022 | 526 | 537 | AAGAGTCCCGCC | 1-10-1MOE | 260 |
| 397949 | 590 | 603 | TCCGAGAGGAGAGA | 2-10-2MOE | 261 |
| 398023 | 591 | 602 | CCGAGAGGAGAG | 1-10-1MOE | 262 |
| 394424 | 604 | 617 | TCATGGCTGCAGCT | 2-10-2MOE | 263 |
| 397913 | 604 | 617 | TCATGGCTGCAGCT | Cytosine in the 2-10-2OMe interval is not modified | 1263 |
| 401974 | 604 | 617 | TCATGGCTGCAGCT | The 2-10-2Ome cytosine is not modified | 1263 |
| 403737 | 604 | 617 | TCATGGCTGCAGCT | 2-10-2 methylene oxygen base BNA is a 5-thiazole nucleus base in the pterion | 1263 |
| 392056 | 604 | 617 | TCATGGCTGCAGCT | Cytosine in the 2-10-2 methylene oxygen base BNA interval is not modified | 1263 |
| 396576 | 604 | 617 | TCATGGCTGCAGCT | Cytosine in 1-1-10-22 '-(butyl acetamido)-palmitamide/methylene oxygen base BNA/ methylene oxygen base BNA interval is not modified | 1263 |
| 396577 | 604 | 617 | TCATGGCTGCAGCT | Cytosine in methylene oxygen base BNA/ methylene oxygen base BNA/2 '-(butyl acetamido)-palmitamide/interval is not modified | 1263 |
| 404121 | 604 | 617 | TCATGGCTGCAGCT | 2-10-2 methylene oxygen base BNA is 5-methylcytosine a 3 ' terminal THF thiophosphate in the interval | 1263 |
| 404228 | 604 | 617 | TCATGGCTGCAGCT | It in the 2-10-2 methylene oxygen base BNA interval oppositely dealkalize base of 5-methylcytosine 5 '-end | 1263 |
| 396007 | 604 | 617 | TCATGGCTGCAGCT | 2-10-2 (R)-CMOE BNA cytosine is not modified | 1263 |
| 396008 | 604 | 617 | TCATGGCTGCAGCT | 2-10-2(S)-CMOE BNA | 1263 |
| | | | Cytosine is not modified | |
| 396009 | 604 | 617 | TCATGGCTGCAGCT | 2-10-2 α-L-methylene oxygen base BNA cytosine is not modified | 1263 |
| 396024 | 604 | 617 | TCATGGCTGCAGCT | 2-10-2 (6 ' S)-6 '-methyl-methylene oxygen base BNA cytosine is not modified | 1263 |
| 396566 | 604 | 617 | TCATGGCTGCAGCT | The amino BNA cytosine of 2-10-2 oxygen base is not modified | 1263 |
| 396567 | 604 | 617 | TCATGGCTGCAGCT | The amino BNA cytosine of 2-10-2N-methyl-oxygen base is not modified | 1263 |
| 396568 | 604 | 617 | TCATGGCTGCAGCT | 2-10-2 (6R)-6-methyl methylene oxygen base BNA cytosine is not modified | 1263 |
| 396569 | 604 | 617 | TCATGGCTGCAGCT | 2-10-2 (5 ' S)-5 '-methyl-methylene oxygen base BNA cytosine is not modified | 1263 |
| | | | | |
| 389982 | 605 | 616 | CATGGCTGCAGC | 1-10-1MOE | 1161 |
| 397950 | 630 | 643 | ACAGCGGCTCAACT | 2-10-2MOE | 1264 |
| 398024 | 631 | 642 | CAGCGGCTCAAC | 1-10-1MOE | 1265 |
| 389955 | 712 | 723 | TGCTCACAGGCG | 1-10-1MOE | 1158 |
| 389754 | 712 | 723 | TGCTCACAGGCG | 1-9-2MOE | 1158 |
| 397951 | 980 | 993 | GGTGACAGGCGACT | 2-10-2MOE | 1266 |
| 398025 | 981 | 992 | GTGACAGGCGAC | 1-10-1MOE | 1267 |
| 389985 | 984 | 995 | ATGGTGACAGGC | 1-10-1MOE | 1268 |
| 389956 | 1206 | 1217 | AGAGGCCTGGCA | 1-10-1MOE | 1269 |
| 389755 | 1206 | 1217 | AGAGGCCTGGCA | 1-9-2MOE | 1269 |
| 389987 | 1248 | 1259 | CTGGATGGTTGC | 1-10-1MOE | 1270 |
| 397952 | 1266 | 1279 | AATGGCTGCTGCGG | 2-10-2MOE | 1271 |
| 398026 | 1267 | 1278 | ATGGCTGCTGCG | 1-10-1MOE | 1160 |
| 389957 | 1274 | 1285 | CCGGGTAATGGC | 1-10-1MOE | 1272 |
| 389756 | 1274 | 1285 | CCGGGTAATGGC | 1-9-2MOE | 1272 |
| 397953 | 1282 | 1295 | TGGACCGCAGCCGG | 2-10-2MOE | 1273 |
| 398027 | 1283 | 1294 | GGACCGCAGCCG | 1-10-1MOE | 1155 |
| 397954 | 1313 | 1326 | TGATGCCCCTCGCT | 2-10-2MOE | 1274 |
| 398028 | 1314 | 1325 | GATGCCCCTCGC | 1-10-1MOE | 1275 |
| 397955 | 1330 | 1343 | CTGGACTTGGCGGT | 2-10-2MOE | 1276 |
| 398029 | 1331 | 1342 | TGGACTTGGCGG | 1-10-1MOE | 1186 |
| 397956 | 1340 | 1353 | GGAAATGGCTCTGG | 2-10-2MOE | 1277 |
| 389958 | 1341 | 1352 | GAAATGGCTCTG | 1-10-1MOE | 1278 |
| 389757 | 1341 | 1352 | GAAATGGCTCTG | 1-9-2MOE | 1278 |
| 389989 | 1353 | 1364 | TTCTGCAGGATG | 1-10-1MOE | 1170 |
| 397957 | 1375 | 1388 | AGAAGCTGCTGGTG | 2-10-2MOE | 1279 |
| 398030 | 1376 | 1387 | GAAGCTGCTGGT | 1-10-1MOE | 1143 |
| 389959 | 1383 | 1394 | GATGGCAGAAGC | 1-10-1MOE | 1280 |
| 389758 | 1383 | 1394 | GATGGCAGAAGC | 1-9-2MOE | 1280 |
| 397958 | 1386 | 1399 | AGAGAGATGGCAGA | 2-10-2MOE | 1281 |
| 398031 | 1387 | 1398 | GAGAGATGGCAG | 1-10-1MOE | 1282 |
| 397959 | 1406 | 1419 | GTGGCTGAAGAAAA | 2-10-2MOE | 1283 |
| 389990 | 1407 | 1418 | TGGCTGAAGAAA | 1-10-1MOE | 1284 |
| 397960 | 1420 | 1433 | ATGTCTGGGAGCCT | 2-10-2MOE | 1285 |
| 392058 | 1420 | 1433 | ATGTCTGGGAGCCT | 2-10-2 methylene oxygen base BNA is a 5-methylcytosine in the pterion | 1285 |
| 389991 | 1421 | 1432 | TGTCTGGGAGCC | 1-10-1MOE | 1286 |
| 336142 | 1432 | 1445 | ATGATGGCTGTCAT | 3-8-3MOE | 1287 |
| 389992 | 1436 | 1447 | TGATGATGGCTG | 1-10-1MOE | 1288 |
| 397961 | 1437 | 1450 | CTTTGATGATGGCT | 2-10-2MOE | 1289 |
| 398032 | 1438 | 1449 | TTTGATGATGGC | 1-10-1MOE | 1222 |
| 336143 | 1444 | 1457 | ACGATCTCTTTGAT | 3-8-3MOE | 1290 |
| 392059 | 1455 | 1468 | TGTTTCTGCTAACG | 2-10-2 methylene oxygen base BNA is a 5-methylcytosine in the pterion | 1291 |
| 389960 | 1456 | 1467 | GTTTCTGCTAAC | 1-10-1MOE | 1292 |
| 389759 | 1456 | 1467 | GTTTCTGCTAAC | 1-9-2MOE | 1292 |
| 336144 | 1457 | 1470 | TTTGTTTCTGCTAA | 3-8-3MOE | 1293 |
| 336145 | 1470 | 1483 | CTTGATATCTCCTT | 3-8-3MOE | 1294 |
| 397962 | 1476 | 1489 | CATCCTCTTGATAT | 2-10-2MOE | 1295 |
| 398033 | 1477 | 1488 | ATCCTCTTGATA | 1-10-1MOE | 1198 |
| 336146 | 1480 | 1493 | AATCCATCCTCTTG | 3-8-3MOE | 1296 |
| 389993 | 1483 | 1494 | GAATCCATCCTC | 1-10-1MOE | 1297 |
| 336147 | 1490 | 1503 | GTCTAAGTCGAATC | 3-8-3MOE | 1298 |
| 389994 | 1495 | 1506 | CAAGTCTAAGTC | 1-10-1MOE | 1299 |
| 398034 | 1499 | 1510 | AGGTCAAGTCTA | 1-10-1MOE | 1300 |
| 398010 | 1500 | 1513 | TACAGGTCAAGTCT | 2-10-2MOE | 1166 |
| 398077 | 1501 | 1512 | ACAGGTCAAGTC | 1-10-1MOE | 1167 |
| 398011 | 1512 | 1525 | CGCAGAAATGGATA | 2-10-2MOE | 1301 |
| 398078 | 1513 | 1524 | GCAGAAATGGAT | 1-10-1MOE | 1302 |
| 398012 | 1570 | 1583 | TTCGCATCCGTCTA | 2-10-2MOE | 1303 |
| 398079 | 1571 | 1582 | TCGCATCCGTCT | 1-10-1MOE | 1304 |
| 398013 | 1663 | 1676 | CCCTAGGTTGAATA | 2-10-2MOE | 1305 |
| 398080 | 1664 | 1675 | CCTAGGTTGAAT | 1-10-1MOE | 1306 |
| 398014 | 2025 | 2038 | GTTATGCAAATCAG | 2-10-2MOE | 1307 |
| 398081 | 2026 | 2037 | TTATGCAAATCA | 1-10-1MOE | 1308 |
| 398015 | 2620 | 2633 | TGACTCAGTAAATT | 2-10-2MOE | 1309 |
| 398082 | 2621 | 2632 | GACTCAGTAAAT | 1-10-1MOE | 1310 |
| 398016 | 2655 | 2668 | TTAAAATTCTTGGG | 2-10-2MOE | 1311 |
| 398083 | 2656 | 2667 | TAAAATTCTTGG | 1-10-1MOE | 1312 |
| 398017 | 2687 | 2700 | CCTAACTTTTAGAC | 2-10-2MOE | 1313 |
| 398084 | 2688 | 2699 | CTAACTTTTAGA | 1-10-1MOE | 1314 |
| 398018 | 2745 | 2758 | ACCTGAAACTGCAA | 2-10-2MOE | 1315 |
| 398085 | 2746 | 2757 | CCTGAAACTGCA | 1-10-1MOE | 1157 |
| 398019 | 13166 | 13179 | GTGTCAAAACCACT | 2-10-2MOE | 1316 |
| 398086 | 13167 | 13178 | TGTCAAAACCAC | 1-10-1MOE | 1204 |
| 398020 | 14675 | 14688 | CCTATTCCCACTGA | 2-10-2MOE | 1317 |
| 398087 | 14676 | 14687 | CTATTCCCACTG | 1-10-1MOE | 1318 |
| 390033 | 15351 | 15362 | AGCCAACTGCAA | 1-10-1MOE | 1483 |
| 398021 | 30985 | 30998 | TTGGATAAATATCT | 2-10-2MOE | 1168 |
| 398088 | 30986 | 30997 | TGGATAAATATC | 1-10-1MOE | 1169 |
| 397964 | 31001 | 31014 | CCCATAGCAATAAT | 2-10-2MOE | 1319 |
| 336150 | 31001 | 31014 | CCCATAGCAATAAT | 3-8-3MOE | 1319 |
| 398035 | 31002 | 31013 | CCATAGCAATAA | 1-10-1MOE | 1320 |
| 389961 | 31005 | 31016 | ATCCCATAGCAA | 1-10-1MOE | 1321 |
| 389760 | 31005 | 31016 | ATCCCATAGCAA | 1-9-2MOE | 1321 |
| 397965 | 31013 | 31026 | TCTGCAGGAAATCC | 2-10-2MOE | 1322 |
| 398036 | 31014 | 31025 | CTGCAGGAAATC | 1-10-1MOE | 1323 |
| 336151 | 31014 | 31027 | TTCTGCAGGAAATC | 3-8-3MOE | 1324 |
| 389996 | 31017 | 31028 | TTTCTGCAGGAA | 1-10-1MOE | 1165 |
| 336152 | 31025 | 31038 | CCTTCAAGTCTTTC | 3-8-3MOE | 1325 |
| 336153 | 31040 | 31053 | TTGTTCCTGTATAC | 3-8-3MOE | 1326 |
| 397966 | 31045 | 31058 | CAATATTGTTCCTG | 2-10-2MOE | 1327 |
| 398037 | 31046 | 31057 | AATATTGTTCCT | 1-10-1MOE | 1202 |
| 389962 | 31047 | 31058 | CAATATTGTTCC | 1-10-1MOE | 1328 |
| 389761 | 31047 | 31058 | CAATATTGTTCC | 1-9-2MOE | 1328 |
| 336154 | 31052 | 31065 | ACATCATCAATATT | 3-8-3MOE | 1329 |
| 389977 | 31480 | 31491 | CTTAAAATTTGG | 1-10-1MOE | 1421 |
| 389776 | 31480 | 31491 | CTTAAAATTTGG | 1-9-2MOE | 1421 |
| 397967 | 62446 | 62459 | CTTTGAATCCAAAA | 2-10-2MOE | 1330 |
| 389998 | 62447 | 62458 | TTTGAATCCAAA | 1-10-1MOE | 1331 |
| 336156 | 62450 | 62463 | TATGCTTTGAATCC | 3-8-3MOE | 1332 |
| 336157 | 62463 | 62476 | TTGTAATGGTTTTT | 3-8-3MOE | 1333 |
| 389963 | 62468 | 62479 | ATCTTGTAATGG | 1-10-1MOE | 1334 |
| 389762 | 62468 | 62479 | ATCTTGTAATGG | 1-9-2MOE | 1334 |
| 336158 | 62475 | 62488 | AGATTGTATATCTT | 3-8-3MOE | 1335 |
| 390000 | 67987 | 67998 | GTCATAATGTCT | 1-10-1MOE | 1194 |
| 397968 | 67987 | 68000 | GTGTCATAATGTCT | 2-10-2MOE | 1195 |
| 398038 | 67988 | 67999 | TGTCATAATGTC | 1-10-1MOE | 1200 |
| 336159 | 67989 | 68002 | CGGTGTCATAATGT | 3-8-3MOE | 1336 |
| 336160 | 67997 | 68010 | AAATTTGGCGGTGT | 3-8-3MOE | 1337 |
| 397969 | 67999 | 68012 | TTAAATTTGGCGGT | 2-10-2MOE | 1338 |
| 398039 | 68000 | 68011 | TAAATTTGGCGG | 1-10-1MOE | 1339 |
| 397971 | 69952 | 69965 | TCTTCAAAAGGATA | 2-10-2MOE | 1340 |
| 336162 | 69952 | 69965 | TCTTCAAAAGGATA | 3-8-3MOE | 1340 |
| 398041 | 69953 | 69964 | CTTCAAAAGGAT | 1-10-1MOE | 1196 |
| 389964 | 69955 | 69966 | GTCTTCAAAA GG | 1-10-1MOE | 1197 |
| 389763 | 69955 | 69966 | GTCTTCAAAAGG | 1-9-2MOE | 1197 |
| 398089 | 69957 | 69968 | TGGTCTTCAAAA | 1-10-1MOE | 1341 |
| 397972 | 69963 | 69976 | GTGGGTTATGGTCT | 2-10-2MOE | 1342 |
| 336163 | 69963 | 69976 | GTGGGTTATGGTCT | 3-8-3MOE | 1342 |
| 398042 | 69964 | 69975 | TGGGTTATGGTC | 1-10-1MOE | 1214 |
| 336164 | 69977 | 69990 | AAGTTCTAGCTGTG | 3-8-3MOE | 1343 |
| 390002 | 69981 | 69992 | ATAAGTTCTAGC | 1-10-1MOE | 1344 |
| 336165 | 69988 | 70001 | AAGGGTTTGATAAG | 3-8-3MOE | 1345 |
| 390003 | 70003 | 70014 | AAGATCTTCACA | 1-10-1MOE | 1243 |
| 397973 | 70003 | 70016 | TCAAGATCTTCACA | 2-10-2MOE | 1346 |
| 336166 | 70003 | 70016 | TCAAGATCTTCACA | 3-8-3MOE | 1346 |
| 398043 | 70004 | 70015 | CAAGATCTTCAC | 1-10-1MOE | 1244 |
| 336167 | 70012 | 70025 | AGCCATTGGTCAAG | 3-8-3MOE | 1347 |
| 390004 | 70021 | 70032 | TTCACTTAGCCA | 1-10-1MOE | 1208 |
| 336168 | 70021 | 70034 | TCTTCACTTAGCCA | 3-8-3MOE | 1348 |
| 389965 | 70040 | 70051 | CTGCAACATGAT | 1-10-1MOE | 1018 |
| 389764 | 70040 | 70051 | CTGCAACATGAT | 1-9-2MOE | 1018 |
| 397974 | 70040 | 70053 | TGCTGCAACATGAT | 2-10-2MOE | 1349 |
| 336169 | 70040 | 70053 | TGCTGCAACATGAT | 3-8-3MOE | 1349 |
| 398044 | 70041 | 70052 | GCTGCAACATGA | 1-10-1MOE | 1350 |
| 336170 | 70051 | 70064 | TTACAGTGAATTGC | 3-8-3MOE | 1351 |
| 390005 | 70059 | 70070 | CCAGCTTTACAG | 1-10-1MOE | 1352 |
| 389966 | 70081 | 70092 | CATTACACCAGT | 1-10-1MOE | 1353 |
| 389765 | 70081 | 70092 | CATTACACCAGT | 1-9-2MOE | 1353 |
| 397975 | 70081 | 70094 | ATCATTACACCAGT | 2-10-2MOE | 1354 |
| 336171 | 70081 | 70094 | ATCATTACACCAGT | 3-8-3MOE | 1354 |
| 398045 | 70082 | 70093 | TCATTACACCAG | 1-10-1MOE | 1355 |
| 336172 | 70096 | 70109 | AATAAATATGCACA | 3-8-3MOE | 1356 |
| 389967 | 70123 | 70134 | TGCCTTTAAAAA | 1-10-1MOE | 1217 |
| 389766 | 70123 | 70134 | TGCCTTTAAAAA | 1-9-2MOE | 1217 |
| 397976 | 70123 | 70136 | TGTGCCTTTAAAAA | 2-10-2MOE | 1357 |
| 398046 | 70124 | 70135 | GTGCCTTTAAAA | 1-10-1MOE | 1199 |
| 336173 | 70124 | 70137 | TTGTGCCTTTAAAA | 3-8-3MOE | 1358 |
| 336174 | 70131 | 70144 | GGGCCTCTTGTGCC | 3-8-3MOE | 1359 |
| 336175 | 70154 | 70167 | CCTTACTTCCCCAT | 3-8-3MOE | 1360 |
| 335345 | 70161 | 70176 | GTCTCTGGTCCTTACT | 3-10-3MOE | 1362 |
| 335356 | 70161 | 70176 | GTCTCTGGTCCTTACT | Connect key for di-phosphate ester in the 3-10-3MOE pterion | 1362 |
| 335414 | 70161 | 70176 | GTCTCTGGTCCTTACT | C in the 3-10-3MOE 3 ' pterion is a 9-(amino ethoxy) phenoxazine | 1362 |
| 335415 | 70161 | 70176 | GTCTCTGGTCCTTACT | C in the 3-10-3MOE 5 ' pterion is a 9-(amino ethoxy) phenoxazine | 1362 |
| 335416 | 70161 | 70176 | GTCTCTGGTCCTTACT | C in the 3-10-3MOE pterion is a 9-(amino ethoxy) phenoxazine | 1362 |
| 336176 | 70161 | 70174 | CTCTGGTCCTTACT | 3-8-3MOE | 1361 |
| 335371 | 70161 | 70176 | GTCTCTGGTCCTTACT | Connect key for di-phosphate ester in the 3-10-3 methylene oxygen base BNA pterion | 1362 |
| 335382 | 70161 | 70176 | GTCTCTGGTCCTTACT | 3-10-3 methylene oxygen base BNA | 1362 |
| 335344 | 70162 | 70175 | TCTCTGGTCCTTAC | 2-10-2MOE | 1363 |
| 335355 | 70162 | 70175 | TCTCTGGTCCTTAC | Connect key for di-phosphate ester in the 2-10-2MOE pterion | 1363 |
| 335411 | 70162 | 70175 | TCTCTGGTCCTTAC | 2-10-2MOE 3 ' C is a 9-(amino ethoxy) phenoxazine | 1363 |
| 335412 | 70162 | 70175 | TCTCTGGTCCTTAC | Second C of 2-10-2MOE is 9-(amino ethoxy) phenoxazine | 1363 |
| 335413 | 70162 | 70175 | TCTCTGGTCCTTAC | Second of 2-10-2MOE and 3 ' terminal C are 9-(amino ethoxy) phenoxazine | 1363 |
| 335370 | 70162 | 70175 | TCTCTGGTCCTTAC | Connect key for di-phosphate ester in the 2-10-2 methylene oxygen base BNA pterion | 1363 |
| 335381 | 70162 | 70175 | TCTCTGGTCCTTAC | 2-10-2 methylene oxygen base BNA | 1363 |
| 398068 | 79799 | 79810 | ACAGCTACACAA | 1-10-1MOE | 1472 |
| 389968 | 89056 | 89067 | TCTGACTGGGAA | 1-10-1MOE | 1151 |
| 389767 | 89056 | 89067 | TCTGACTGGGAA | 1-9-2MOE | 1151 |
| 336177 | 89056 | 89069 | CCTCTGACTGGGAA | 3-8-3MOE | 1364 |
| 336178 | 89063 | 89076 | CATAGCGCCTCTGA | 3-8-3MOE | 1365 |
| 336179 | 89083 | 89096 | CAGGTAGCTATAAT | 3-8-3MOE | 1366 |
| 390007 | 89085 | 89096 | CAGGTAGCTATA | 1-10-1MOE | 1367 |
| 390009 | 89135 | 89146 | ATCTTGTGAAAC | 1-10-1MOE | 1175 |
| 397977 | 89135 | 89148 | TCATCTTGTGAAAC | 2-10-2MOE | 1368 |
| 336180 | 89135 | 89148 | TCATCTTGTGAAAC | 3-8-3MOE | 1368 |
| 398047 | 89136 | 89147 | CATCTTGTGAAA | 1-10-1MOE | 1369 |
| 336181 | 89145 | 89158 | GTTTCAAACATCAT | 3-8-3MOE | 1370 |
| 397978 | 89147 | 89160 | TAGTTTCAAACATC | 2-10-2MOE | 1371 |
| 398048 | 89148 | 89159 | AGTTTCAAACAT | 1-10-1MOE | 1372 |
| 389969 | 89152 | 89163 | GAATAGTTTCAA | 1-10-1MOE | 1373 |
| 389768 | 89152 | 89163 | GAATAGTTTCAA | 1-9-2MOE | 1373 |
| 336182 | 89155 | 89168 | CATTGGAATAGTTT | 3-8-3MOE | 1374 |
| 397979 | 89162 | 89175 | CACTGAACATTGGA | 2-10-2MOE | 1375 |
| 398049 | 89163 | 89174 | ACTGAACATTGG | 1-10-1MOE | 1376 |
| 390010 | 89165 | 89176 | CCACTGAACATT | 1-10-1MOE | 1240 |
| 336183 | 89166 | 89179 | CCGCCACTGAACAT | 3-8-3MOE | 1377 |
| 397980 | 94786 | 94799 | CAGACCACAAACTG | 2-10-2MOE | 1378 |
| 398050 | 94787 | 94798 | AGACCACAAACT | 1-10-1MOE | 1379 |
| 392060 | 94790 | 94803 | CTGGCAGACCACAA | Cytosine in the 2-10-2 methylene oxygen base BNA interval is not modified | 1380 |
| 389970 | 94791 | 94802 | TGGCAGACCACA | 1-10-1MOE | 1249 |
| 389769 | 94791 | 94802 | TGGCAGACCACA | 1-9-2MOE | 1249 |
| 336185 | 94792 | 94805 | AGCTGGCAGACCAC | 3-8-3MOE | 1381 |
| 397981 | 94798 | 94811 | ACCTTTAGCTGGCA | 2-10-2MOE | 1382 |
| 398051 | 94799 | 94810 | CCTTTAGCTGGC | 1-10-1MOE | 1220 |
| 336186 | 94803 | 94816 | TCTTCACCTTTAGC | 3-8-3MOE | 1383 |
| 390012 | 94860 | 94871 | TCAAAGTACATG | 1-10-1MOE | 1384 |
| 336187 | 94862 | 94875 | GAACTCAAAGTACA | 3-8-3MOE | 1385 |
| 389971 | 94865 | 94876 | GGAACTCAAAGT | 1-10-1MOE | 1386 |
| 389770 | 94865 | 94876 | GGAACTCAAAGT | 1-9-2MOE | 1386 |
| 397982 | 94865 | 94878 | AGGGAACTCAAAGT | 2-10-2MOE | 1387 |
| 398052 | 94866 | 94877 | GGGAACTCAAAG | 1-10-1MOE | 1388 |
| 336188 | 94869 | 94882 | GCTGAGGGAACTCA | 3-8-3MOE | 1389 |
| 336189 | 94888 | 94901 | TCACCACACACAGG | 3-8-3MOE | 1390 |
| 336190 | 94904 | 94917 | GAACTCTACTTTGA | 3-8-3MOE | 1391 |
| 389972 | 94909 | 94920 | GAAGAACTCTAC | 1-10-1MOE | 1392 |
| 389771 | 94909 | 94920 | GAAGAACTCTAC | 1-9-2MOE | 1392 |
| 397983 | 94910 | 94923 | GTGGAAGAACTCTA | 2-10-2MOE | 1393 |
| 398053 | 94911 | 94922 | TGGAAGAACTCT | 1-10-1MOE | 1394 |
| 336191 | 94915 | 94928 | TGTTTGTGGAAGAA | 3-8-3MOE | 1395 |
| 336192 | 94925 | 94938 | CATCTTGTTCTGTT | 3-8-3MOE | 1396 |
| 397984 | 97824 | 97837 | AGTGAAACATTTTG | 2-10-2MOE | 1397 |
| 398054 | 97825 | 97836 | GTGAAACATTTT | 1-10-1MOE | 1144 |
| 336194 | 97827 | 97840 | AAAAGTGAAACATT | 3-8-3MOE | 1145 |
| 389973 | 97835 | 97846 | TTACCCAAAAGT | 1-10-1MOE | 1398 |
| 389772 | 97835 | 97846 | TTACCCAAAAGT | 1-9-2MOE | 1398 |
| 336195 | 97836 | 97849 | TATTTACCCAAAAG | 3-8-3MOE | 1399 |
| 397985 | 97837 | 97850 | GTATTTACCCAAAA | 2-10-2MOE | 1400 |
| 398055 | 97838 | 97849 | TATTTACCCAAA | 1-10-1MOE | 1401 |
| 397986 | 97853 | 97866 | TCCTGGTATGAAGA | 2-10-2MOE | 1402 |
| 336196 | 97853 | 97866 | TCCTGGTATGAAGA | 3-8-3MOE | 1402 |
| 398056 | 97854 | 97865 | CCTGGTATGAAG | 1-10-1MOE | 1403 |
| 390015 | 97857 | 97868 | GGTCCTGGTATG | 1-10-1MOE | 1404 |
| 336197 | 97862 | 97875 | TTCCTCTGGTCCTG | 3-8-3MOE | 1405 |
| 397987 | 97866 | 97879 | AGGTTTCCTCTGGT | 2-10-2MOE | 1406 |
| 398057 | 97867 | 97878 | GGTTTCCTCTGG | 1-10-1MOE | 1407 |
| 336198 | 97873 | 97886 | TTTTCTGAGGTTTC | 3-8-3MOE | 1408 |
| 336199 | 97891 | 97904 | AGACTTCCATTTTC | 3-8-3MOE | 1409 |
| 389974 | 97893 | 97904 | AGACTTCCATTT | 1-10-1MOE | 1410 |
| 389773 | 97893 | 97904 | AGACTTCCATTT | 1-9-2MOE | 1410 |
| 336200 | 97918 | 97931 | CAAATGCTATCGAT | 3-8-3MOE | 1411 |
| 336201 | 97933 | 97946 | GCACGCTCTATACT | 3-8-3MOE | 1412 |
| 389975 | 97934 | 97945 | CACGCTCTATAC | 1-10-1MOE | 1413 |
| 389774 | 97934 | 97945 | CACGCTCTATAC | 1-9-2MOE | 1413 |
| 336202 | 97948 | 97961 | TCCTTGTCATTATC | 3-8-3MOE | 1414 |
| 397988 | 97990 | 98003 | GCTTTGTCAAGATC | 2-10-2MOE | 1415 |
| 389976 | 97991 | 98002 | CTTTGTCAAGAT | 1-10-1MOE | 1177 |
| 389775 | 97991 | 98002 | CTTTGTCAAGAT | 1-9-2MOE | 1177 |
| 336203 | 97991 | 98004 | TGCTTTGTCAAGAT | 3-8-3MOE | 1416 |
| 397989 | 98017 | 98030 | AAGTATCGGTTGGC | 2-10-2MOE | 1417 |
| 336204 | 98017 | 98030 | AAGTATCGGTTGGC | 3-8-3MOE | 1417 |
| 398058 | 98018 | 98029 | AGTATCGGTTGG | 1-10-1MOE | 1418 |
| 336205 | 98032 | 98045 | TTAAAATTTGGAGA | 3-8-3MOE | 1419 |
| 397990 | 98034 | 98047 | CCTTAAAATTTGGA | 2-10-2MOE | 1420 |
| 389977 | 98035 | 98046 | CTTAAAATTTGG | 1-10-1MOE | 1421 |
| 389776 | 98035 | 98046 | CTTAAAATTTGG | 1-9-2MOE | 1421 |
| 336207 | 102230 | 102243 | TCTACTGTTTTTGT | 3-8-3MOE | 1422 |
| 336208 | 102236 | 102249 | GGCTCCTCTACTGT | 3-8-3MOE | 1423 |
| 335330 | 102251 | 102265 | AGCCTCTGGATTTGA | 1-10-4MOE | 1424 |
| 335331 | 102252 | 102266 | TAGCCTCTGGATTTG | 1-10-4MOE | 1426 |
| 336209 | 102252 | 102265 | AGCCTCTGGATTTG | 3-8-3MOE | 1425 |
| 335377 | 102252 | 102266 | TAGCCTCTGGATTTG | 1-10-4 methylene oxygen base BNA is a di-phosphate ester in the 3 ' pterion | 1426 |
| 335376 | 102252 | 102266 | TAGCCTCTGGATTTG | 1-10-4 methylene oxygen base BNA | 1426 |
| 390577 | 102253 | 102266 | TAGCCTCTGGATTT | The 1-10-3MOE cytosine is not modified | 1427 |
| | | | T in the pterion is the 2-thio-thymine | |
| 335332 | 102253 | 102267 | CTAGCCTCTGGATTT | 1-10-4MOE | 1429 |
| 386770 | 102253 | 102266 | TAGCCTCTGGATTT | 1-11-2MOE | 1427 |
| 375560 | 102253 | 102267 | CTAGCCTCTGGATTT | 2-10-3MOE | 1429 |
| 391449 | 102253 | 102267 | CTAGCCTCTGGATTT | The 2-10-3MOE cytosine is not modified | 1429 |
| 392055 | 102253 | 102267 | CTAGCCTCTGGATTT | Cytosine in the 2-10-3MOE interval is not modified | 1429 |
| 362977 | 102253 | 102268 | GCTAGCCTCTGGATTT | 2-12-2MOE | 1428 |
| 371975 | 102253 | 102267 | CTAGCCTCTGGATTT | 3-10-2MOE | 1429 |
| 386556 | 102253 | 102268 | GCTAGCCTCTGGATTT | 3-10-3MOE | 1428 |
| 335341 | 102253 | 102268 | GCTAGCCTCTGGATTT | 3-10-3MOE | 1428 |
| 335350 | 102253 | 102268 | GCTAGCCTCTGGATTT | 3-10-3MOE | 1428 |
| 383739 | 102253 | 102268 | GCTAGCCTCTGGATTT | 3-10-3MOE is a 5-methylcytosine in the interval | 1428 |
| 390576 | 102253 | 102268 | GCTAGCCTCTGGATTT | 3-10-3MOE at interval in for the T in the 5-methylcytosine pterion be the 2-thio-thymine | 1428 |
| 390580 | 102253 | 102268 | GCTAGCCTCTGGATTT | Pyrimidine in the 3-10-3MOE pterion is that the cytosine in the 5-thiazole interval is not modified | 1428 |
| 390581 | 102253 | 102268 | GCTAGCCTCTGGATTT | Cytosine in the 3-10-3MOE interval is not modified | 1428 |
| 391096 | 102253 | 102268 | GCTAGCCTCTGGATTT | 3-10-3MOE | 1428 |
| 391098 | 102253 | 102268 | GCTAGCCTCTGGATTT | 3-10-3MOE | 1428 |
| 391863 | 102253 | 102268 | GCTAGCCTCTGGATTT | The 3-10-3MOE cytosine is not modified | 1428 |
| 384071 | 102253 | 102268 | GCTAGCCTCTGGATTT | 3-10-3OMe is a 5-methylcytosine in the interval | 1428 |
| 385036 | 102253 | 102268 | GCTAGCCTCTGGATTT | Cytosine in 1-2-10-3 OMe/2 '-O-methyl-4 '-sulfo-/2 '-O-methyl-4 '-sulfo-pterion is not modified | 1428 |
| 335368 | 102253 | 102268 | GCTAGCCTCTGGATTT | Connect key for di-phosphate ester in the 3-10-3 methylene oxygen base BNA pterion | 1428 |
| 391864 | 102253 | 102268 | GCTAGCCTCTGGATTT | Cytosine in the 3-10-3 methylene oxygen base BNA interval is not | 1428 |
| | | | Modified | |
| 392054 | 102253 | 102267 | CTAGCCTCTGGATTT | Cytosine in the 2-10-3 methylene oxygen base BNA interval is not modified | 1429 |
| 391172 | 102253 | 102267 | CTAGCCTCTGGATTT | Methylene oxygen base BNA cytosine is not modified | 1429 |
| 391865 | 102253 | 102268 | GCTAGCCTCTGGATTT | 3-10-3 methylene oxygen base BNA cytosine is not modified | 1428 |
| 391868 | 102253 | 102268 | GCTAGCCTCTGGATTT | 1-2-10-3 (5 ' R)-5 '-methyl-methylene oxygen base BNA/ methylene oxygen base BNA/ (5 ' R)-5 '-methyl-methylene oxygen base BNA cytosine is not modified | 1428 |
| 391869 | 102253 | 102268 | GCTAGCCTCTGGATTT | 1-2-10-3 methylene oxygen base BNA/ (5 ' S)-5 '-methyl-methylene oxygen base BNA/ (5 ' S)-5 '-methyl-methylene oxygen base BNA cytosine is not modified | 1428 |
| 384073 | 102253 | 102268 | GCTAGCCTCTGGATTT | 3-10-3 methylene oxygen base BNA is a 5-methylcytosine in the interval | 1428 |
| 335379 | 102253 | 102268 | GCTAGCCTCTGGATTT | 3-10-3 methylene oxygen base BNA | 1428 |
| 390579 | 102253 | 102268 | GCTAGCCTCTGGATTT | 1-1-1-10-3MOE/4 ' sulfo-/2 '-O-[(2-methoxyl group) ethyl]-4 '-sulfo-/2 '-O-[(2-methoxyl group) ethyl] connect key for di-phosphate ester in the not modified pterion of cytosine in-4 '-sulfo-pterion | 1428 |
| 390582 | 102253 | 102268 | GCTAGCCTCTGGATTT | 1-2-10-3MOE/4 ' sulfo-/2 '-O-[(2-methoxyl group) ethyl] connect key for di-phosphate ester in the not modified pterion of cytosine in-4 '-sulfo-pterion | 1428 |
| 390606 | 102253 | 102268 | GCTAGCCTCTGGATTT | Cytosine in the 1-2-10-3 MOE/pentaF/pentaF pterion is a di-phosphate ester in the not modified pterion | 1428 |
| | | | Lian Jian | |
| 384072 | 102253 | 102268 | GCTA GCCTCTGGATTT | Cytosine in the 1-2-10-3 MOE/pentaF/pentaF pterion is not modified | 1428 |
| 385871 | 102253 | 102268 | GCTAGCCTCTGGATTT | 1-2-10-3OMe/ 2 '-O-[(2-methoxyl group) ethyl]-4 '-sulfo-/2 '-O-[(2-methoxyl group) ethyl] cytosine in-4 '-sulfo-pterion is not modified | 1428 |
| 390607 | 102253 | 102268 | GCTAGCCTCTGGATTT | Cytosine in the 3-10-3MOE/pentaF pterion is not modified | 1428 |
| 390608 | 102253 | 102268 | GCTAGCCTCTGGATTT | Cytosine in the 1-2-10-3 MOE/pentaF/pentaF pterion is not modified | 1428 |
| 390609 | 102253 | 102268 | GCTAGCCTCTGGATTT | Cytosine in the 3-10-2-1 MOE/MOE/pentaF pterion is not modified | 1428 |
| 386682 | 102253 | 102268 | GCTAGCCTCTGGATTT | 1-2-10-32 '-(butyl acetamido)-palmitamide/MOE/MOE | 1428 |
| 391173 | 102253 | 102267 | CTAGCCTCTGGATTT | 2-10-3 (5 ' R)-5 '-methyl-methylene oxygen base BNA cytosine is not modified | 1429 |
| 391174 | 102253 | 102267 | CTAGCCTCTGGATTT | 2-10-3 (5 ' S)-5 '-methyl-methylene oxygen base BNA cytosine is not modified | 1429 |
| 386970 | 102254 | 102266 | TAGCCTCTGGATT | 1-10-2MOE | 1432 |
| 390578 | 102254 | 102266 | TAGCCTCTGGATT | T in the not modified pterion of 1-10-2MOE cytosine is the 2-thio-thymine | 1432 |
| 335333 | 102254 | 102268 | GCTAGCCTCTGGATT | 1-10-4MOE | 1430 |
| 331429 | 102254 | 102267 | CTAGCCTCTGGATT | 2-10-2MOE | 1431 |
| 335349 | 102254 | 102267 | CTAGCCTCTGGATT | 2-10-2MOE | 1431 |
| 335367 | 102254 | 102267 | CTAGCCTCTGGATT | Connect key for di-phosphate ester in the 2-10-2 methylene oxygen base BNA pterion | 1431 |
| 392061 | 102254 | 102267 | CTAGCCTCTGGATT | Cytosine in the 2-10-2 methylene oxygen base BNA interval is not modified | 1431 |
| 335378 | 102254 | 102267 | CTAGCCTCTGGATT | 2-10-2 methylene oxygen base | 1431 |
| | | | BNA | |
| 383991 | 102254 | 102266 | TAGCCTCTGGATT | 1-10-2 2 '-(acetylaminohydroxyphenylarsonic acid butyl-acetamido)-cholesterol/MOE | 1432 |
| 383992 | 102254 | 102266 | TAGCCTCTGGATT | 1-10-2 2 '-(acetylaminohydroxyphenylarsonic acid butyl-acetamido)-cholic acid/MOE | 1432 |
| 386683 | 102254 | 102266 | TAGCCTCTGGATT | 1-10-2 5 ' terminal 2 '-(butyl acetamido)-palmitamide/MOE | 1432 |
| 390614 | 102254 | 102266 | TAGCCTCTGGATT | 1-10-2PentaF | 1432 |
| 389954 | 102255 | 102266 | TAGCCTCTGGAT | 1-10-1MOE | 1434 |
| 335334 | 102255 | 102269 | TGCTAGCCTCTGGAT | 1-10-4MOE | 1433 |
| 389777 | 102255 | 102266 | TAGCCTCTGGAT | 1-9-2MOE | 1434 |
| 390430 | 102256 | 102268 | GCTAGCCTCTGGA | The 1-10-2MOE cytosine is not modified | 1163 |
| 390431 | 102256 | 102268 | GCTAGCCTCTGGA | C in the not modified pterion of 1-10-2MOE cytosine is 9-(amino ethoxy) phenoxazine | 1163 |
| 390432 | 102256 | 102268 | GCTAGCCTCTGGA | 1-10-2MOE | 1163 |
| 390433 | 102256 | 102268 | GCTAGCCTCTGGA | The not modified Nt 6 of 1-10-2MOE cytosine is 9-(amino ethoxy) phenoxazine | 1163 |
| 390434 | 102256 | 102268 | GCTAGCCTCTGGA | The not modified Nt 7 of 1-10-2MOE cytosine is 9-(amino ethoxy) phenoxazine | 1163 |
| 390435 | 102256 | 102268 | GCTAGCCTCTGGA | The not modified Nt 9 of 1-10-2MOE cytosine is 9-(amino ethoxy) phenoxazine | 1163 |
| 335335 | 102256 | 102270 | CTGCTAGCCTCTGGA | 1-10-4MOE | 1435 |
| 335336 | 102257 | 102271 | ACTGCTAGCCTCTGG | 1-10-4MOE | 1436 |
| 335337 | 102258 | 102272 | AACTGCTAGCCTCTG | 1-10-4MOE | 1437 |
| 335338 | 102259 | 102273 | GAACTGCTAGCCTCT | 1-10-4MOE | 1438 |
| 335339 | 102260 | 102274 | TGAACTGCTAGCCTC | 1-10-4MOE | 1439 |
| 335340 | 102261 | 102275 | TTGAACTGCTAGCCT | 1-10-4MOE | 1440 |
| 336210 | 102261 | 102274 | TGAACTGCTAGCCT | 3-8-3MOE | 1441 |
| 397991 | 102264 | 102277 | AGTTGAACTGCTAG | 2-10-2MOE | 1442 |
| 398059 | 102265 | 102276 | GTTGAACTGCTA | 1-10-1MOE | 1443 |
| 390017 | 102268 | 102279 | GAAGTTGAACTG | 1-10-1MOE | 1444 |
| 336211 | 102269 | 102282 | ACAGAAGTTGAACT | 3-8-3MOE | 1445 |
| 397992 | 102293 | 102306 | TCATTGTCACTAAC | 2-10-2MOE | 1446 |
| 336212 | 102293 | 102306 | TCATTGTCACTAAC | 3-8-3MOE | 1446 |
| 398060 | 102294 | 102305 | CATTGTCACTAA | 1-10-1MOE | 1447 |
| 389978 | 102301 | 102312 | TCAGGTTCATTG | 1-10-1MOE | 1448 |
| 389778 | 102301 | 102312 | TCAGGTTCATTG | 1-9-2MOE | 1448 |
| 336213 | 102303 | 102316 | ATGATCAGGTTCAT | 3-8-3MOE | 1449 |
| 397993 | 102307 | 102320 | TATAATGATCAGGT | 2-10-2MOE | 1450 |
| 398061 | 102308 | 102319 | ATAATGATCAGG | 1-10-1MOE | 1451 |
| 336214 | 102314 | 102327 | GAATATCTATAATG | 3-8-3MOE | 1139 |
| 390019 | 102320 | 102331 | GTCAGAATATCT | 1-10-1MOE | 1173 |
| 397994 | 102322 | 102335 | TGGTGTCA GAATAT | 2-10-2MOE | 1452 |
| 398062 | 102323 | 102334 | GGTGTCAGAATA | 1-10-1MOE | 1255 |
| 336215 | 102326 | 102339 | TCAGTGGTGTCAGA | 3-8-3MOE | 1453 |
| 336216 | 102339 | 102352 | CTCTGGATCAGAGT | 3-8-3MOE | 1454 |
| 390020 | 102340 | 102351 | TCTGGATCAGAG | 1-10-1MOE | 1149 |
| 336217 | 102349 | 102362 | AAGGTTCATTCTCT | 3-8-3MOE | 1455 |
| 397995 | 102357 | 102370 | TTCATCAAAAGGTT | 2-10-2MOE | 1456 |
| 389979 | 102358 | 102369 | TCATCAAAAGGT | 1-10-1MOE | 1176 |
| 389779 | 102358 | 102369 | TCATCAAAAGGT | 1-9-2MOE | 1176 |
| 336218 | 102358 | 102371 | CTTCATCAAAA GGT | 3-8-3MOE | 1457 |
| 390021 | 102360 | 102371 | CTTCATCAAAAG | 1-10-1MOE | 1458 |
| 336219 | 102366 | 102379 | ATGCTGATCTTCAT | 3-8-3MOE | 1459 |
| 336220 | 102381 | 102394 | TTTTGTAATTTGTG | 3-8-3MOE | 1460 |
| 336221 | 102387 | 102400 | TCAGACTTTTGTAA | 3-8-3MOE | 1461 |
| 390022 | 102443 | 102454 | CAGTTTATTCAA | 1-10-1MOE | 1142 |
| 397996 | 102477 | 102490 | TGTCCTATTGCCAT | 2-10-2MOE | 1462 |
| 398063 | 102478 | 102489 | GTCCTATTGCCA | 1-10-1MOE | 1205 |
| 397997 | 102487 | 102500 | TCTGACACAATGTC | 2-10-2MOE | 1463 |
| 398064 | 102488 | 102499 | CTGACACAATGT | 1-10-1MOE | 1464 |
| 397998 | 102505 | 102518 | TGTTCCTATAACTG | 2-10-2MOE | 1465 |
| 398065 | 102506 | 102517 | GTTCCTATAACT | 1-10-1MOE | 1466 |
| 397999 | 102528 | 102541 | AAGATTGGTCAGGA | 2-10-2MOE | 1467 |
| 398066 | 102529 | 102540 | AGATTGGTCAGG | 1-10-1MOE | 1468 |
| 398000 | 102561 | 102574 | GTGTCAAAACCCTG | 2-10-2MOE | 1469 |
| 398067 | 102562 | 102573 | TGTCAAAACCCT | 1-10-1MOE | 1210 |
| 390025 | 102563 | 102574 | GTGTCAAAACCC | 1-10-1MOE | 1211 |
| 390026 | 102595 | 102606 | AGCTACACAACC | 1-10-1MOE | 1470 |
| 398001 | 102596 | 102609 | CACAGCTACACAAC | 2-10-2MOE | 1471 |
| 398068 | 102597 | 102608 | ACAGCTACACAA | 1-10-1MOE | 1472 |
| 398002 | 102607 | 102620 | TATATACATGACAC | 2-10-2MOE | 1473 |
| 398069 | 102608 | 102619 | ATATACATGACA | 1-10-1MOE | 1474 |
| 390027 | 102612 | 102623 | AGGTATATACAT | 1-10-1MOE | 1206 |
| 398003 | 102637 | 102650 | AATTTTAAATGTCC | 2-10-2MOE | 1475 |
| 398070 | 102638 | 102649 | ATTTTAAATGTC | 1-10-1MOE | 1476 |
| 390028 | 102648 | 102659 | TCCTAATTGAAT | 1-10-1MOE | 1477 |
| 390029 | 102667 | 102678 | AAAGTGCCATCT | 1-10-1MOE | 1478 |
| 398004 | 102689 | 102702 | TTTATAAAACTGGA | 2-10-2MOE | 1479 |
| 398071 | 102690 | 102701 | TTATAAAACTGG | 1-10-1MOE | 1480 |
| 390030 | 102691 | 102702 | TTTATAAAACTG | 1-10-1MOE | 1074 |
| 398005 | 102827 | 102840 | TGCAAACTTATCTG | 2-10-2MOE | 1481 |
| 398072 | 102828 | 102839 | GCAAACTTATCT | 1-10-1MOE | 1482 |
| 390033 | 102836 | 102847 | AGCCAACTGCAA | 1-10-1MOE | 1483 |
| 398006 | 102837 | 102850 | CTTAGCCAACTGCA | 2-10-2MOE | 1484 |
| 398073 | 102838 | 102849 | TTAGCCAACTGC | 1-10-1MOE | 1485 |
| 398007 | 103069 | 103082 | AGCACCAATATGCT | 2-10-2MOE | 1247 |
| 398074 | 103070 | 103081 | GCACCAATATGC | 1-10-1MOE | 1248 |
| 398008 | 103267 | 103280 | TAAATCATTGTCAA | 2-10-2MOE | 1486 |
| 398075 | 103268 | 103279 | AAATCATTGTCA | 1-10-1MOE | 1233 |
| 398009 | 103327 | 103340 | GCACTGGCCTTGAT | 2-10-2MOE | 1487 |
| 398076 | 103328 | 103339 | CACTGGCCTTGA | 1-10-1MOE | 1488 |
| 390041 | 103332 | 103343 | TTAGCACTGGCC | 1-10-1MOE | 1489 |
| 390047 | 103585 | 103596 | TGTGTAAGGTCA | 1-10-1MOE | 1490 |
| 390049 | 103636 | 103647 | GTTAATGACATT | 1-10-1MOE | 1491 |
| 390050 | 103660 | 103671 | GTATTCAAGTAA | 1-10-1MOE | 1140 |
| 390052 | 103780 | 103791 | GACAATTTCTAC | 1-10-1MOE | 1492 |
| 390054 | 103862 | 103873 | AACACTGCACAT | 1-10-1MOE | 1493 |
Salt, prodrug and bioequivalence thing (bioequivalent)
Antisense compounds provided herein comprises the salt of the acceptable salt of any medicine, ester or this ester, perhaps any other functionalized chemical equivalent, this equivalent can (directly or indirectly) provide bioactive metabolites or its residue when comprising people's animal.Therefore, for example, present disclosure specification also relates to the drug acceptable salt and the other biological equivalent of the prodrug of antisense compounds and drug acceptable salt, this prodrug.
Term " prodrug " expression is with the healing potion of non-activity or the preparation of low activity form, and it is being converted to activity form (being medicine) under the effect of endogenous enzyme, chemical substance and/or condition in the middle of health or the soma.Specifically, according to disclosed method among WO 93/24510 or the WO94/26764, the prodrug version of oligonucleotide is to prepare as SATE ((S-acetyl-2-sulfur ethyl) phosphate ester) derivant.Prodrug can comprise that also one or both ends wherein comprise the antisense compounds of such nuclear base, and described nuclear base can be cut (for example connecting key by locating to mix phosphodiester backbone endways) to produce reactive compound.In certain embodiments, one or more non-drug moieties cut down to produce activity form from prodrug.In some this embodiment, this non-drug moiety is not nucleotide or oligonucleotide.
Term " drug acceptable salt " refers to can accept and the acceptable salt of medicine on the physiology of chemical compound described herein, is promptly keeping the required biological activity of parent compound not give the salt of unwanted toxicology effect again to parent compound.The sodium salt of antisense oligonucleotide is suitable for, and is widely accepted to be used for the mankind are carried out the therapeutic administration.
In certain embodiments, also provide the salt of double-strandednucleic acid (including but not limited to the dsRNA chemical compound), include but not limited to sodium salt.
G. some drugs compositions
In certain embodiments, pharmaceutical composition of the present invention comprises one or more short antisense compounds and one or more excipient.In some this embodiment, excipient is selected from water, saline solution, alcohol, Polyethylene Glycol, gelatin, lactose, amylase, magnesium stearate, Pulvis Talci, silicic acid, viscous paraffin (viscous paraffin), hydroxy methocel and polyvinylpyrrolidone.
In certain embodiments, pharmaceutical composition of the present invention prepares with known technology, and described known technology includes but not limited to mixing, dissolving, pelletize, makes dragee (dragee-making), grinds (levigating), emulsifying, encapsulation, embedding or tablet forming technique.
In certain embodiments, pharmaceutical composition of the present invention is liquid (for example suspensoid, elixir and/or a solution).In some this embodiment, composition of liquid medicine is to assign to prepare with one-tenth well known in the art, and described composition includes but not limited to water, glycerol, oil, alcohol, correctives, antiseptic and coloring agent.
In certain embodiments, pharmaceutical composition of the present invention is solid (for example tablet and/or a capsule).In some this embodiment, the solid composite medicament that comprises one or more oligonucleotide is to assign to prepare with one-tenth well known in the art, and described composition includes but not limited to starch, saccharide, diluent, granulating agent, lubricant, binding agent and disintegrating agent.
In certain embodiments, pharmaceutical composition of the present invention is to prepare as depot formulation (depotpreparation).Some this depot formulation is more more long-acting than non-depot formulation usually.In certain embodiments, this preparation is by implanting (for example subcutaneous or intramuscular) or giving by intramuscular injection.In certain embodiments, depot formulation is to prepare with suitable polymeric material or hydrophobic material (for example emulsion in acceptable oil) or ion exchange resin, perhaps is prepared into the indissoluble derivant, for example is prepared into the salt of indissoluble.
In certain embodiments, pharmaceutical composition of the present invention comprises delivery system.The example of delivery system includes but not limited to liposome and emulsion.Some delivery system can be used for preparing the some drugs compositions, comprises that those comprise the pharmaceutical composition of hydrophobic compound.In certain embodiments, use some organic solvent such as dimethyl sulfoxine.
In certain embodiments, pharmaceutical composition of the present invention comprises one or more tissue specificities and sends molecule, and the described molecule of sending is designed to one or more drug delivery of the present invention to specific tissue or cell type.For example, in certain embodiments, pharmaceutical composition comprises the liposome that is coated with tissue specificity antibody.
In certain embodiments, pharmaceutical composition of the present invention comprises the cosolvent system.Some this cosolvent system comprises for example benzylalcohol, non-polar surfactant, water miscibility organic polymer and water.In certain embodiments, this cosolvent system is used to hydrophobic compound.This cosolvent west carry can a limiting examples be VPD cosolvent system, it is the ethanol solution that comprises 3%w/v benzylalcohol, 8%w/v non-polar surfactant polysorbate Tween 80 TM and 65%w/v Liquid Macrogol.Each ratio of this cosolvent system be can change considerably, and don't the dissolubility and the toxicity characteristic of system changed.In addition, also can change each cosolvent composition itself, for example, can use other surfactants to replace the polysorbate Tween 80; Can change the classification size (fraction size) of Polyethylene Glycol; The other biological compatible polymer can replace Polyethylene Glycol, for example polyvinylpyrrolidone; Other saccharides or polysaccharide can replace dextrose.
In certain embodiments, pharmaceutical composition of the present invention comprises slow-released system.A limiting examples of this slow-released system is the semi-permeable substrate that the solid hydrophobic polymer is made.In certain embodiments, depend on its chemical characteristic, slow-released system can be at several hrs, several days, several week or some months release medicine in the time.
In certain embodiments, preparation of pharmaceutical compositions of the present invention becomes for orally give.In some this embodiment, pharmaceutical composition is to prepare by one or more oligonucleotide and one or more drug acceptable carriers are made up.Some this carrier can make pharmaceutical composition can be mixed with tablet, pill (pill), dragee (dragee), capsule, liquid agent, gel, syrup, serosity agent, suspensoid etc., for the oral absorption of experimenter.In certain embodiments, medicinal composition for oral administration obtains by oligonucleotide and one or more solid excipients are mixed.Suitable excipient includes but not limited to filler such as saccharide, comprises lactose, sucrose, mannitol or Sorbitol; Cellulosics, for example corn starch, wheaten starch, rice fecula, potato starch, gelatin, Tragacanth, methylcellulose, hydroxypropyl emthylcellulose, sodium carboxymethyl cellulose and/or polyvinylpyrrolidone (PVP).In certain embodiments, this mixture is optional is ground and the optional auxiliary substance that adds.In certain embodiments, pharmaceutical composition is formed to obtain tablet or dragee core (core).In certain embodiments, add disintegrating agent (for example crospolyvinylpyrrolidone, agar or alginic acid or its salt such as sodium alginate).
In certain embodiments, coating is provided for sugar-coat alkyl core.In some this embodiment, can use concentrated sugar solution, it can be chosen wantonly and comprise arabic gum, Pulvis Talci, polyvinylpyrrolidone, carbopol gel, Polyethylene Glycol and/or titanium dioxide, lacquer solution and appropriate organic solvent or solvent mixture.Dyestuff or pigment can be added to tablet or dragee coating.
In certain embodiments, medicinal composition for oral administration is push style (push-fit) capsule of being made by gelatin.Some this push style capsule comprises one or more medicaments of the present invention and blended with it one or more filleies such as lactose, adhesive such as starch and/or lubricant such as Pulvis Talci or magnesium stearate and optional stabilizing agent.In certain embodiments, medicinal composition for oral administration is the soft seal capsule of being made by gelatin and plasticizer such as glycerol or Sorbitol.In some soft capsule, one or more medicaments of the present invention are dissolved or be suspended in the suitable liquid, and described liquid is fatty oil (fatty oil), liquid paraffin or liquid macrogol for example.Can add stabilizing agent in addition.
In certain embodiments, preparation of pharmaceutical compositions becomes for oral administration (buccaladministration).Some this pharmaceutical composition is tablet or the lozenge of preparing in a usual manner.
In certain embodiments, preparation of pharmaceutical compositions becomes for injection to give (for example intravenous, subcutaneous, intramuscular injection etc.).In some this embodiment, pharmaceutical composition comprises carrier and preparation in liquid, aqueous, and the buffer of described liquid, aqueous for example water or physical compatibility is as Hanks solution, Ringer's solution or normal saline buffer solution.In certain embodiments, also comprise other compositions (for example help dissolved composition or serve as the composition of antiseptic).In certain embodiments, injectable suspensions is to wait with suitable liquid-carrier, suspending agent to prepare.Some medicinal composition for injections is to present with unit dosage form, for example presents in ampoule or in multi-dose container.Some medicinal composition for injections is suspensoid, solution or the Emulsion in oil-containing or water-bearing media, and can comprise blender (formulatory agent) as suspending agent, stabilizing agent and/or dispersant.Some is applicable to that the solvent of medicinal composition for injections includes but not limited to lipophilic solvent and fatty oil such as Oleum sesami, Acrawax such as ethyl oleate or triglyceride and liposome.Moisture injection suspension can comprise the material of the viscosity that can improve suspensoid, as sodium carboxymethyl cellulose, Sorbitol or glucosan.Randomly, this suspensoid also can comprise suitable stabilizers, and the dissolubility that perhaps can improve medicament is so that the material of the highly spissated solution of preparation.
In certain embodiments, preparation of pharmaceutical compositions becomes for saturating mucosa to give.In some this embodiment, the penetrating agent that will be suitable for barrier to be infiltrated is used for preparation.This penetrating agent is well known in the art.
In certain embodiments, preparation of pharmaceutical compositions becomes for sucking to give.Some this inhaled medication compositions is the form preparation with the aerosol spray (aerosol spray) in pressurized package (pressurized pack) or nebulizer (nebulizer).Some this pharmaceutical composition comprises propellant, for example dichlorodifluoromethane, Arcton 11, dichlorotetra-fluoroethane, carbon dioxide or other suitable gas.In certain embodiments, use pressurized aerosol, can determine dosage unit with the valve of transmissibility metered amount (metered amount).In certain embodiments, can prepare capsule and the medicine-storing tube (cartridge) that uses in inhaler (inhaler) or insufflator (insufflator).Some this preparation comprises medicament of the present invention and the suitable powder binder such as the mixture of powders of lactose or starch.
In certain embodiments, preparation of pharmaceutical compositions becomes for rectum to give, as suppository or enema,retention.Some this pharmaceutical composition comprises known composition, as cocoa butter and/or other glyceride.
In certain embodiments, preparation of pharmaceutical compositions becomes for topical administration.Some this pharmaceutical composition comprises gentle humidification base material, as ointment (ointment) or emulsifiable paste (cream).Exemplary suitable ointment base material includes but not limited to that vaseline, vaseline add volatile silicone, lanoline and water-in-oil emulsion such as EucerinTM(can be available from Beiersdorf, Cincinnati, Ohio).Exemplary suitable emulsifiable paste base material includes but not limited to Nivea CreamTM(can be available from Beiersdorf, Cincinnati, Ohio), cold cream (cold cream, USP), Purpose CreamTM(can be available from Johnson ﹠amp; Johnson, New Brunswick, N.J.), hydrophilic ointment (USP) and LubridermTM(can be available from Pfizer, Morris Plains, N.J.).
In certain embodiments, pharmaceutical composition of the present invention comprises the oligonucleotide for the treatment of effective dose.In certain embodiments, this treatment effective dose is enough to prevent, alleviate or improves the symptom of disease or prolong the experimenter's who is treated survival period.Determining fully in those skilled in the art's limit of power of treatment effective dose.
In certain embodiments, the short antisense compounds of one or more the present invention is prepared as prodrug.In certain embodiments, when giving in vivo, prodrug is chemically converted on the biology, has more active short antisense compounds form on the medicine or in the treatment.In certain embodiments, prodrug is suitable for, because they give than corresponding activity form is easier.For example, in some cases, prodrug may have more bioavailability (for example passing through orally give) than corresponding activity form.In some cases, prodrug is compared dissolubility with corresponding activity form improvement.In certain embodiments, the water solublity of prodrug is lower than corresponding activity form.In some cases, this prodrug can pass cell membrane better, because be deleterious for mobility at water solublity in the cell membrane.In certain embodiments, prodrug is an ester.In some this embodiment, ester is hydrolyzed into carboxylic acid by metabolism when giving.In some cases, the chemical compound that contains carboxylic acid is corresponding activity form.In certain embodiments, prodrug comprises and the bonded small peptide of acid groups (polyamino acid).In some this embodiment, this peptide is cut when giving and forms corresponding activity form.
In certain embodiments, prodrug is to produce like this: pharmaceutical active compounds is modified, made can be reproduced when this reactive compound gives in vivo.Prodrug can be designed to change the metabolic stability or the transhipment feature of medicine, can cover side effect or toxicity, can improve the taste of medicine or can change other features or the characteristic of medicine.Those skilled in the art are by the knowledge of drug effect dynamic process and drug metabolism in the relevant body, if know certain pharmaceutical active compounds, the prodrug that just can design this chemical compound is (referring to for example Nogrady (1985) Medicinal Chemistry A Biochemical Approach, Oxford University Press, New York, pages 388-392).
In certain embodiments, comprise disease or the sufferer that the pharmaceutical composition of one or more medicaments of the present invention can be used for treating (particularly among the people experimenter) in the mammal.Suitable route of administration includes but not limited to following mode: in oral, internal rectum, saturating mucosa, enteral (intestinal), enteral (enteral), part, suppository, suction, the sheath, in the ventricle, intraperitoneal, intranasal, ophthalmic and parenteral (for example intravenous, intramuscular, bone marrow are interior and subcutaneous).In certain embodiments, give the interior medicine (pharmaceutical intrathecals) of sheath to realize part rather than systemic exposure.For example, can be with the pharmaceutical composition direct injection in the zone of required effect (for example at kidney or heart area).
In certain embodiments, lacking antisense compounds compares with its parent oligonucleotide and is particularly suitable for orally give.In certain embodiments, short antisense compounds is more suitable in orally give than its parent oligonucleotide, improves because they compare usefulness with its parent oligonucleotide.In certain embodiments, short antisense compounds is more suitable in orally give than its parent oligonucleotide, but has better stability availability or dissolubility property because they are compared with its parent oligonucleotide.
In yet another aspect, medicament is aseptic lyophilizing oligonucleotide, and available suitable diluent such as sterile water for injection carry out rehydration.The product of rehydration gives as subcutaneous injection liquid or as venoclysis liquid after being diluted in the saline.The oligonucleotide that freeze dried drug products comprised is to prepare with water for injection, and transfers to pH 7.0-9.0, lyophilizing then with acid or alkali in preparation process.Freeze dried oligonucleotide can be the oligonucleotide of 25-800mg.Will be appreciated that this contains 25,50,75,100,125,150,175,200,225,250,275,300,325,350,375,425,450,475,500,525,550,575,600,625,650,675,700,725,750,775 and the lyophilizing oligonucleotide of 800mg.Freeze dried drug products can be packaged in the 2mL I type clear glass bottle (handling through ammonium sulfate), clogs with the brombutyl rubber stopper, and uses aluminum FLIP-Closedtop (overseal) sealing.
Compositions of the present invention can comprise other routines in addition and be present in auxiliary element in the pharmaceutical composition, and the consumption of these compositions is levels that this area has been established.Therefore, for example, compositions can comprise other compatible pharmaceutically active material, as pruritus, astringent, local anesthetic or antiinflammatory, the material that perhaps can comprise the other various dosage forms that can be used for the physics preparation present composition is as dyestuff, correctives, antiseptic, antioxidant, opacifier, thickening agent and stabilizing agent.But this material is not answered the biological activity of each composition of the excessive interference present composition when adding.Preparation can be sterilized, and can mix with auxiliary agent if needed, described auxiliary agent is lubricant, antiseptic, stabilizing agent, wetting agent, emulsifying agent, the salt in order to influence osmotic pressure, buffer agent, coloring agent, correctives and/or aromatic substance etc. for example, and disadvantageous interaction can not take place with the oligonucleotide in the preparation these auxiliary agents.
Antisense compounds provided herein also can mix with other molecule, molecular structure or compound mixture, encapsulation, put together or otherwise associate.
This paper also describes is the pharmaceutical composition and the preparation of the antisense compounds that comprises that this paper provides.Pharmaceutical composition can give in many ways, and this depends on and need carry out topical therapeutic or whole body therapeutic and depend on the zone that will treat.In a preferred embodiment, be lung surface topical administration particularly on the surface of respiratory tract, for example spray into, suck or be blown into powder or aerosol gives by per os and/or nose.
The pharmaceutical preparation described herein that can present with unit dosage form expediently can be prepared according to the known routine techniques of medicine industry.This technology comprises makes each active component and pharmaceutical carrier or excipient that bonded step take place.In general, preparation is like this preparation: each active component and liquid-carrier, micro-solid carrier or the two are combined equably and closely, and words if necessary are to product be shaped (for example being configured as specific granular size so that send) then.In a preferred embodiment, pharmaceutical preparation is to be prepared in appropriate solvent (for example water or normal saline) for pulmonary administration, perhaps be mixed with sterile preparation, wherein carrier or other materials make the drop can form required diameter, for sending with device with inhaler, intranasal delivery device, nebulizer and other pulmonary delivery.Perhaps, pharmaceutical preparation can be mixed with dry powder, for using in Diskus.
" pharmaceutical carrier " or " excipient " can be in order to one or more delivery of nucleic acids are gone up inert media to medicine acceptable solvent, suspending agent or any other pharmacology of individuality, and they are well known in the art.Excipient can be a liquid or solid, will carry out in conjunction with the administering mode of being planned its selection, and making to provide the bulkiness and the denseness of abbreviation when other compositions of itself and nucleic acid and given pharmaceutical composition make up.
H. some treatment is used
In certain embodiments, antisense compounds is used for regulate the expression of the target gene in the animal (as the people).In certain embodiments, this chemical compound can be used to treat metabolic disease or regulates one or more disease indications.For example, described method comprises that the antisense compounds with the expression that can regulate target gene of effective dose gives described needs treatment this step with the animal of this target gene diseases associated or disease.The antisense compounds that can effectively regulate the expression of target RNA or protein expression product provided herein is considered to active antisense compounds.Active antisense compounds also comprises one or more the chemical compound that can effectively regulate in numerous disease indications, and described disease indication comprises metabolic disease or cardiovascular disease indication, and the example is described hereinafter.
The adjusting of the expression of target gene can measure in body fluid (may contain or not contain cell), tissue or the organ of this animal.Obtaining the method for sample for analysis such as body fluid (for example saliva, serum, urine), tissue (for example biopsy) or organ and prepare sample for the method for analyzing, is well known to a person skilled in the art.The analytical method of RNA and protein level is discussed hereinbefore, and is well known to a person skilled in the art.The effect of treatment can be assessed like this: by routine clinical method known in this field, measure and express relevant biological marker or disease indication with target gene from above-mentioned body fluid, tissue or organ that the animal that has contacted one or more chemical compounds described herein is collected.These biological markers include but not limited to liver transaminase, bilirubin, albumin, blood urea nitrogen, creatine and other kidneys and liver function sign; Adhesion molecule, c-proteins C reactive, chemotactic factor, cytokine and other inflammation signs in interleukin, tumor necrosis factor, the born of the same parents.
Antisense compounds provided herein can be added to suitable medicine by certain chemical compound with effective dose and can accept in the diluent or carrier and use in pharmaceutical composition.The carrier and the diluent of science and technology hands are well known to a person skilled in the art.The selection of diluent or carrier will be decided according to a plurality of factors, includes but not limited to the dissolubility and the route of administration of chemical compound.These Considerations are well known to those skilled in the art.In one aspect, antisense compounds described herein can suppress the expression of target gene.Described chemical compound also can be used for making in order to the medicine of treatment with target gene diseases associated or disease.
Also be susceptible to so that the method that body fluid, organ or tissue contact with the antisense compounds that one or more this paper provides or the compositions of effective dose.Body fluid, organ or tissue can be contacted with one or more chemical compounds, thereby cause the target gene in the cell in body fluid, the organ or tissue to express adjusted.Effective dose can be measured like this: with the method that technical staff's routine is known, monitor antisense compounds or the compositions regulating action to target nucleic acids or its product, thereby be measured to effective dose.
Give altogether
In certain embodiments, two or more antisense compounds are given altogether.In certain embodiments, pharmaceutical composition comprises antisense compounds (particularly oligonucleotide) and one or more targeting second nucleic acid target target antisense compounds of one or more targeting first nucleic acid.In these antisense compounds one or more can be short antisense compounds.In certain embodiments, pharmaceutical composition comprises two or more antisense compounds of the same nucleic acid target target of targeting zones of different.In this antisense compounds one or more can be short antisense compounds.Two or more chemical compounds of combining can use or sequential use simultaneously.
In certain embodiments, other medicament of one or more pharmaceutical compositions and one or more is given altogether.In certain embodiments, described one or more other medicament be designed to its disease for the treatment of or disease identical with one or more pharmaceutical compositions of the present invention.In certain embodiments, described one or more other medicament be designed to its disease for the treatment of or disease different with one or more pharmaceutical compositions of the present invention.In certain embodiments, described one or more other medicament is designed to treat the ill effect of one or more pharmaceutical compositions of the present invention.In certain embodiments, one or more pharmaceutical compositions of the present invention and another medicament are given altogether, to treat the ill effect of this another medicament.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is given simultaneously.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is given at different time.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is prepared together in single dosage form.In certain embodiments, with other separately preparation of medicament of one or more pharmaceutical compositions of the present invention and one or more.
In certain embodiments, can comprise that lipid reduces medicament with the medicament that pharmaceutical composition of the present invention gives altogether.In some this embodiment, can include but not limited to atorvastatin, simvastatin, rosuvastatin with the medicament that pharmaceutical composition of the present invention gives altogether and according to Ezetimibe.In some this embodiment, lipid is reduced medicament give before the pharmaceutical composition of the present invention giving.In some this embodiment, lipid is reduced medicament after giving pharmaceutical composition of the present invention, give.In some this embodiment, lipid is reduced medicament when giving pharmaceutical composition of the present invention, give.In some this embodiment, the dosage that the lipid that gives altogether reduces medicament is identical with the dosage that gives separately to be given when lipid reduces medicament.In some this embodiment, the dosage that the lipid that gives altogether reduces medicament is lower than the dosage that is given when giving lipid reduction medicament separately.In some this embodiment, the dosage that the lipid that gives altogether reduces medicament is higher than the dosage that is given when giving lipid reduction medicament separately.
In certain embodiments, it is the HMG-CoA reductase inhibitor that the lipid that gives altogether reduces medicament.In some this embodiment, the HMG-CoA reductase inhibitor is an inhibin.In some this embodiment, inhibin is selected from atorvastatin, simvastatin, pravastatin, fluvastatin and rosuvastatin.In certain embodiments, it is cholesterol absorption inhibitor that the lipid that gives altogether reduces medicament.In some this embodiment, cholesterol absorption inhibitor is according to Ezetimibe.In certain embodiments, it is HMG-CoA reductase inhibitor and cholesterol absorption inhibitor formulated together altogether that the lipid that gives altogether reduces medicament.In some this embodiment, it is according to Ezetimibe/simvastatin that lipid formulated together altogether reduces medicament.In certain embodiments, it is microsomal triglyceride transfer protein inhibitor (MTP inhibitor) that the lipid that gives altogether reduces medicament.
In certain embodiments, the medicament that gives altogether is a bile acid chelating agent.In some this embodiment, bile acid chelating agent is selected from colestyramine, colestipol and colesevelam.
In certain embodiments, the medicament that gives altogether is a nicotinic acid.In some this embodiment, nicotinic acid is selected from rapid release nicotinic acid, extended release nicotinic acid and slow release nicotinic acid.
In certain embodiments, the medicament that gives altogether is a Carboxymethylcellulose.In some this embodiment, Carboxymethylcellulose is selected from gemfibrozil, fenofibrate, chlorine Bei Te, bezafibrate and ciprofibrate.
More examples of the medicament that can give altogether with pharmaceutical composition of the present invention include but not limited to corticosteroid (including but not limited to prednisone); Immunoglobulin (includes but not limited to vein immunoglobulin (IVIg); Analgesic (for example acetaminophen); Antiinflammatory (including but not limited to NSAID (non-steroidal anti-inflammatory drug) (for example ibuprofen, COX-1 inhibitor and cox 2 inhibitor)); Salicylate; Antibiotic; Antiviral agent; Antifungal; Antidiabetic medicine (for example biguanide, glucosidase inhibitor, insulin, sulfonylureas and thiazolidinediones); The adrenergic modulation agent; Diuretic; Hormone (for example short anabolism steroid, androgen, estrogen, calcitonin, progesterone, somatostatin and thyroxin); Immunomodulator; Muscle relaxant; Hydryllin; Osteoporosis medicament (for example diphosphonate, calcitonin and estrogen); Prostaglandin; Antineoplastic agent; The spiritual healing medicament; Tranquilizer; Poison Oak Tree (oak) or black poison wood (sumac) product; Antibody and vaccine.
In certain embodiments, pharmaceutical composition of the present invention can be reduced therapy in conjunction with lipid gives.In some this embodiment, it is that curative life style changes that lipid reduces therapy.In some this embodiment, it is the LDL Apheresis that lipid reduces therapy.
I. test kit, research reagent and diagnosis
Antisense compounds provided herein can be used for diagnosis and uses as research reagent and test kit (kit).In addition, can specific inhibition of gene expression or the regulator gene antisense compounds of expressing, often be used for explaining the function of specific gene by the technical staff, perhaps be used for distinguishing each member's of certain biological approach function.
For the use in test kit and diagnosis, antisense compounds as herein described can be combined individually or with other chemical compounds or healing potion, as the instrument of difference and/or fabric analysis, with explaination cell and certain part of the central gene of expressing of tissue or the expression pattern of whole complementary series (entire complement).The method of gene expression analysis is well known to a person skilled in the art.
J. lack some advantage of antisense compounds
In certain embodiments, lacking antisense compounds compares with its parent oligonucleotide and has advantage.For example, in certain embodiments, short antisense compounds to the affinity of target nucleic acids greater than its parent oligonucleotide.In certain embodiments, the external usefulness of lacking antisense compounds is higher than its parent oligonucleotide.In some this embodiment, the external usefulness of this raising can not be explained by the affinity that improves fully.In certain embodiments, the external usefulness of this raising is attributable to that short antisense compounds infiltrates the raising of the ability in the cell and/or near the raising of the ability of the target nucleic acids in the cell.In certain embodiments, lack that usefulness is higher than its parent oligonucleotide in the body of antisense compounds.In certain embodiments, the interior usefulness of this higher body is not owing to the raising of external usefulness or the improve of affinity.In certain embodiments, short antisense compounds is compared with its parent oligonucleotide, and usefulness is much larger than according to the external usefulness or the usefulness that can predict according to affinity in the body that it had.In certain embodiments, in the body of this raising usefulness be attributable to the raising of bioavailability, cytotropic infiltration better, in case enter behind the cell to target nucleic acids near better or other factors.
In certain embodiments, can expect that the specificity that short antisense compounds and its parent oligonucleotide compare its target nucleic acids is lower.In some this embodiment, can expect that short antisense compounds can cause side effect to increase, comprise that the potential of toxic action may.In certain embodiments, do not observe this other side effect.In certain embodiments, the specific combinative non-target nucleic acids of short antisense compounds can not can touch for short antisense compounds.In this embodiment, comprise side-effect problem the lacking of toxicity than expection.
In certain embodiments, because short antisense compounds is less, their unlikely conjugated proteins.In some this embodiment, this less protein bound causes toxicity lower, because protein bound can cause undesired consequence.In certain embodiments, this less protein bound causes usefulness higher, has more antisense compounds can supply the performance therapeutical effect because this makes.In certain embodiments, less protein bound causes the toxic reduction of drug-drug interactions.
Non-limiting disclosure and being attached to herein by reference