Movatterモバイル変換


[0]ホーム

URL:


CN101553236A - Compounds and methods for modulating expression of GCCR - Google Patents

Compounds and methods for modulating expression of GCCR
Download PDF

Info

Publication number
CN101553236A
CN101553236ACNA2007800254167ACN200780025416ACN101553236ACN 101553236 ACN101553236 ACN 101553236ACN A2007800254167 ACNA2007800254167 ACN A2007800254167ACN 200780025416 ACN200780025416 ACN 200780025416ACN 101553236 ACN101553236 ACN 101553236A
Authority
CN
China
Prior art keywords
antisense compounds
short antisense
certain embodiments
nucleotide
moe
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Pending
Application number
CNA2007800254167A
Other languages
Chinese (zh)
Inventor
S·巴诺特
R·S·吉尔里
R·麦凯
B·P·莫尼亚
P·P·塞思
A·M·休科夫斯基
E·E·施韦策
E·万斯维奇
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Ionis Pharmaceuticals Inc
Original Assignee
Isis Pharmaceuticals Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Isis Pharmaceuticals IncfiledCriticalIsis Pharmaceuticals Inc
Publication of CN101553236ApublicationCriticalpatent/CN101553236A/en
Pendinglegal-statusCriticalCurrent

Links

Landscapes

Abstract

The disclosure describes short antisense compounds, including such compounds comprising chemically modified high affinity monomers that are 8-16 monomers in length. Certain such short antisense compounds can be used to reduce target nucleic acids and/or proteins in cells, tissues, and animals with increased potency and improved therapeutic index. Thus, the present invention provides short antisense compounds comprising high affinity nucleotide modifications useful for reducing target RNA in vivo. Such short antisense compounds are also effective at lower doses than previously described antisense compounds, which allows for reduced toxicity and therapeutic costs. In addition, the short antisense compounds described have greater potential for oral administration.

Description

Regulate the Compounds and methods for of the expression of GCCR
The application is the part continuation application of the PCT application PCT/US2007/061183 of submission on January 27th, 2007, and the priority of therefore applying for by this PCT of 35 U.S.C. §, 120 requirements.The U.S. Provisional Application series number 60/746 that the application also submits to by 35 U.S.C. § 119 (e) requirements on Mays 5th, 2006,631, the U.S. Provisional Application series number of submitting on May 11st, 2,006 60/747,059, the U.S. Provisional Application series number of submitting on June 23rd, 2,006 60/805, the priority of the U.S. Provisional Application series number 60/864,554 that on November 6th, 660 and 2006 submitted to.The full content of each of these applications and all lists of references of wherein quoting all are attached to herein for any and all purpose integral body by reference.
Sequence table
The application submits to together with the sequence table of electronic format.Sequence table is to provide as the title of the 700Kb size of creating on May 7th, 2007 file for CORE0061WO12SEQ.TXT.Information in the sequence table of electronic format integral body by reference is attached to herein.
Background of invention
This way of targeting Disease-causing gene sequence is initial (the Belikovaet al. that proposes before nearly 40 years, Tet.Lett., 1967,37,3557-3562), in cell culture, proved antisense activity (Zamecnik et al. after having spent 10 years, Proc.Natl.Acad.Sci.U.S.A., 1978,75,280-284).Antisense technology is derived from the disease of Disease-causing gene or an advantage in the disease is in treatment, and it is the direct genetic method that can regulate the expression of specific Disease-causing gene.
In general, thus the principle of antisense technology is antisense compounds and target nucleic acid, and the adjusting that hybridization realizes activity of gene expression or function (as transcribe, translation or montage) takes place.The adjusting of gene expression can realize by for example target degraded or based on the inhibition that occupies (occupancy-basedinhibition).Regulate an example of RNA target function by degraded, the degraded that is taken place when being the hybridization of target RNA and DNA sample antisense compounds based on RNA enzyme H.Another example of degrading regulator gene to express by target is that RNA disturbs (RNAi).RNAi is a kind of form of the gene silencing of antisense mediation, relates to introduce dsRNA and cause being reduced by the sequence-specific of the endogenous mRNA level of targeting.Sequence-specific makes antisense compounds extremely attractive in the following areas: determine the research tool of the instrument of (gene functionalization) and evaluation and characterisation of nucleic acids enzyme and regulate the medicine of any pathogenetic expression of gene that relates to multiple disease as selectivity as target validation (target validation) and gene function.
Antisense technology is the effective ways that reduce the expression of one or more specific gene products, and is therefore provable particularly useful in multiple treatment application, diagnostic application and research are used.Nucleoside through chemical modification is used to be incorporated in the antisense compounds usually, strengthening one or more characteristics, as nuclease resistance, pharmacokinetics or to the affinity of target RNA.
Although the expansion of relevant knowledge since the invention antisense technology is higher for effect (efficacy), toxicity is less and lower-cost antisense compounds still has the demand that is not met.Till present disclosure, high-affinity is modified (high-affinity modification) and is not applied to yet designing in order to reduce the short antisense compounds of target RNA in the body.This is because worry that it has the target specificity of much degree when the target that 15 nucleotide or shorter sequence should be used for reducing in the living systems.Research is before reported, can realize higher specificity with the antisense compounds of length 16-20 nuclear base (nucleobase), and therefore realizes bigger usefulness (potency) potentiality.
Present disclosure explanation will be incorporated in the antisense compounds through the high-affinity nucleotide of chemical modification, can make the about 8-16 of length the short antisense compounds of examining base can be used for reducing target RNA in the animal with the usefulness of raising and improved therapeutic index.Therefore, this paper provides so short antisense compounds, and it comprises the high-affinity nucleotide modification that can be used for reducing target RNA in the body.This short antisense compounds is also effective under than the lower dosage of the antisense compounds of describing before, makes toxicity and treatment cost reduce.
Summary of the invention
Disclosed herein is that short antisense compounds and the described chemical compound of use reduce the method that the target RNA in the cell or tissue is expressed.In certain embodiments, provided herein is the method that reduces the expression of the target in the animal, and described method comprises that the short antisense compounds with the nucleic acid of this target of targeting gives this animal.In some embodiment Shen, short antisense compounds is the oligonucleotide chemical compound.In certain embodiments, short antisense oligonucleotide length be about 8-16, preferably 9-15, more preferably 9-14, more preferably 10-14 nucleotide and comprise interval region (gapregion), the both sides of this interval region respectively are connected to pterion (wing), and wherein each pterion is made up of 1-3 nucleotide independently.Preferred die body (motif) includes but not limited to pterion-deoxidation interval-pterion die body of 3-10-3, the 2-10-3,2-10-2,1-10-1,2-8-2,1-8-1,3-6-3 or the 1-6-1 that are selected from.In a preferred embodiment, lack antisense oligonucleotide and comprise at least one high-affinity modification.In another embodiment, high-affinity is modified the high-affinity nucleotide that comprises through chemical modification.In a preferred embodiment, each pterion is made up of 1-3 the nucleotide of modifying through high-affinity independently.In one embodiment, the nucleotide of modifying through high-affinity is through sugar-modified nucleotide.
In certain embodiments, lacking antisense compounds, to demonstrate the uptake ratio of comparing in intestinal with the longer antisense compounds of length higher.Therefore, this paper also provides the method that reduces the target in the animal, and described method comprises orally give short antisense compounds of the present invention.
In certain embodiments, lack the proteinic nucleic acid that antisense compounds targeting coding is selected from ApoB, SGLT2, PCSK9, SOD1, CRP, GCCR, GCGR, DGAT2, PTP1B and PTEN.
Provide the method for the metabolic disease in the treatment animal in addition, described method comprises the animal that so short antisense compounds is needed this treatment, and this weak point antisense compounds targeting relates to the nucleic acid of regulating glucose metabolism or removing, lipid metabolism, cholesterol metabolism or insulin signaling transduction.
Also provide insulin sensitivity, the reduction blood-glucose that increases in the animal or reduce HbA1cMethod, described method comprises and gives described animal with so short antisense compounds that this weak point antisense compounds targeting coding relates to the nucleic acid of the target of regulating glucose metabolism or removing, lipid metabolism, cholesterol metabolism or insulin signaling transduction.
Provide the total serum cholesterol that reduces in the animal in addition, serum LDL, serum VLDL, serum hdl, serum triglycerides, the method of serum apolipoprotein (a) or free fatty, described method comprises and gives described animal with so short antisense compounds, this weak point antisense compounds targeting coding relates to regulates glucose metabolism or removing, lipid metabolism, the nucleic acid of the target of cholesterol metabolism or insulin signaling transduction, wherein said short antisense compounds length is 8-16 nucleotide and comprises interval region, the both sides of this interval region respectively are connected to the pterion, and wherein each pterion is made up of 1-3 the nucleotide of modifying through high-affinity independently.
Relate to some target of regulating glucose metabolism or removing, lipid metabolism, cholesterol metabolism or insulin signaling transduction and include but not limited to GCGR and ApoB-100.Therefore, provide the short antisense compounds and the method that reduces described target and/or the expression of target nucleic acids in animal of the nucleic acid of targeting coding GCGR and ApoB-100.In addition, the short antisense compounds that provides the nucleic acid of targeting coding GCGR and ApoB-100 is used for the treatment of the purposes of disease metabolic or cardiovascular or disease.
In certain embodiments, lack antisense compounds and also comprise conjugated group (conjugategroup).Conjugated group includes but not limited to C16And cholesterol.
In certain embodiments, lacking antisense compounds comprises and connects key (internucleoside linkage) or sugar moieties between at least one modified nuclear base, nucleoside.In certain embodiments, connecting key between this modified nucleoside is to connect key between thiophosphate (phosphorothioate) nucleoside.In certain embodiments, connecting key between each modified nucleoside is to connect key between the thiophosphate nucleoside.
In certain embodiments, lack antisense compounds and comprise at least one high-affinity modification.In some this embodiment, the high-affinity modification is the high-affinity nucleotide through chemical modification.In certain embodiments, the high-affinity nucleotide through chemical modification is through sugar-modified nucleotide.In certain embodiments, in sugar-modified nucleotide, have at least one between 4 ' and 2 ' position of sugar, to comprise abutment (bridge).Each independently is β-D or α-L sugar conformation through sugar-modified nucleotide.In certain embodiments, each described nucleotide of modifying through high-affinity is given every nucleotide Δ T of 1-4 degree (degree) at leastmIn certain embodiments, each describedly comprises 2 '-substituent group outside H or the OH through sugar-modified nucleotide.Thisly comprise that through sugar-modified nucleotide those have the nucleotide of the dicyclo sugar moieties of 4 '-2 ' bridge joint.In certain embodiments, each 2 '-substituent group independently is alkoxyl, substituted alkoxy or halogen.In certain embodiments, each 2 '-substituent group is OCH2CH2OCH3(2 '-MOE).
In certain embodiments, short antisense compounds have one or more between 4 ' and 2 ' position of sugar, comprise abutment through sugar-modified nucleotide, wherein each described abutment independently comprises 2-4 and independently is selected from-[C (R1) (R2)]n-,-C (R1)=C (R2)-,-C (R1)=N-,-C (=NR1)-,-C (=O)-,-C (=S)-,-O-,-Si (R1)2-,-S (=O)x-and-N (R1)-linking group;
Wherein
X is 0,1 or 2;
N is 1,2,3 or 4;
Each R1And R2Independent is H, protecting group, hydroxyl, C1-C12Alkyl, substituted C1-C12Alkyl, C2-C12Thiazolinyl, substituted C2-C12Thiazolinyl, C2-C12Alkynyl, substituted C2-C12Alkynyl, C5-C20Aryl, substituted C5-C20Aryl, heterocyclic radical, substituted heterocyclic radical, heteroaryl, substituted heteroaryl, C5-C7Alcyl, substituted C5-C7Alcyl, halogen, OJ1, NJ1J2, SJ1, N3, COOJ1, acyl group (C (=O)-H), substituted acyl group, CN, sulfonyl (S (=O)2-J1) or sulfinyl (S (=O)-J1); With
Each J1And J2Independent is H, C1-C12Alkyl, substituted C1-C12Alkyl, C2-C12Thiazolinyl, substituted C2-C12Thiazolinyl, C2-C12Alkynyl, substituted C2-C12Alkynyl, C5-C20Aryl, substituted C5-C20Aryl, acyl group (C (=O)-H), substituted acyl group, heterocyclic radical, substituted heterocyclic radical, C1-C12Aminoalkyl, substituted C1-C12Aminoalkyl or protecting group.
In one aspect, each described abutment independently is-[C (R1) (R2)]n-,-[C (R1) (R2)]n-O-,-C (R1R2)-N (R1)-O-or-C (R1R2)-O-N (R1)-.In yet another aspect, each described abutment independently is 4 '-(CH2)3-2 ', 4 '-(CH2)2-2 ', 4 '-CH2-O-2 ', 4 '-(CH2)2-O-2 ', 4 '-CH2-O-N (R1)-2 ' and 4 '-CH2-N (R1)-O-2 '-, each R wherein1Independent is H, protecting group or C1-C12Alkyl.
In certain embodiments, this paper provides and can be used for reducing the target relevant with the morbid state in the animal and/or the short antisense compounds of target RNA.In certain embodiments, provide short antisense compounds in order to the expression that reduces the target RNA in the animal.In certain embodiments, this paper provides short antisense compounds preparing in order to the purposes in the medicine of the metabolic disease in the treatment animal.In certain embodiments, this paper provides short antisense compounds preparing in order to increase insulin sensitivity, the reduction blood-glucose in the animal or to reduce HbA1cMedicine in purposes.Also providing short antisense compounds is preparing in order to the purposes in the medicine that reduces total serum cholesterol, serum LDL, serum VLDL, serum hdl, serum triglycerides, serum apolipoprotein (a) or free fatty in the animal.
In certain embodiments, short antisense compounds provided herein is compared with the longer parent antisense oligonucleotide of 20 nucleotide of length at least, strikes in target RNA to subtract to show the usefulness that equates or improve aspect (knockdown).In certain embodiments, lacking antisense compounds compares with the parent antisense oligonucleotide and demonstrates onset faster (target RNA minimizing).In certain embodiments, the usefulness of raising is in kidney.In certain embodiments, target RNA is mainly expressed in kidney.In certain embodiments, the usefulness of raising is in liver.In certain embodiments, target RNA is mainly expressed in kidney.
Detailed Description Of The Invention
It should be understood that above summary of the invention and detailed Description Of The Invention hereinafter all only are exemplary and indicative, do not limit the present invention of institute's prescription.The singular noun of using in this article comprises plural implication, unless clearly indicate really not so." or (perhaps) " that this paper uses mean " and/or ", unless otherwise prescribed.In addition, used term " comprises ", " comprising " be nonrestrictive.Equally, key element and the component that comprises a unit (unit) both contained in term such as " key element (element) " or " component (component) ", also contain and comprise key element and the component that surpasses a subunit (subunit), unless clearly indicate really not so.
Chapter title used herein only for the purpose of style of writing tissue, can not be interpreted as limiting described theme.The All Files that refers among the application or the each several part of file include but not limited to patent, patent application, article, books and paper, all for any purpose by reference clearly integral body be attached to herein.U.S. Patent Application Serial 10/712,795 and 10/200,710 for any purpose by reference clearly integral body be attached to herein.
A. definition
Unless provide specific definition, otherwise used analytical chemistry described herein, synthetic organic chemistry and medical science and pharmaceutical chemical term and these chemical method and the technology of relating to is term and method and technology known in this field and commonly used.Standard techniques can be used for chemosynthesis, the experimenter is prepared and send and treated to chemical analysis, at medication preparation.Some this technology and method can for example find in the following document: " Carbohydrate Modifications inAntisense Research " Sangvi and Cook (editor), American ChemicalSociety, Washington D.C., 1994; With " Remington ' s PharmaceuticalSciences, " Mack Publishing Co., Easton, Pa., 18th edition, 1990, these documents are that any purpose is attached to herein by reference.Under situation about allowing, present disclosure is all patents, patent application, disclosed application and other publications of indication and GenBank and other data bases' sequence in the whole text, and all integral body is attached to herein by reference.
Following term has following implication, unless otherwise:
Term used herein " nucleoside " means the glycosylamine that comprises nuclear base and sugar.Nucleoside includes but not limited to natural nucleus glycoside, dealkalize base (abasic) nucleoside, modified nucleoside and has mimic base and/or the nucleoside of glycosyl group.
Term used herein " nucleotide " refers to comprise the nuclear base and sugar reaches and the glycosylamine of the bound phosphate groups that sugar is covalently bound.Nucleotide can be with multiple substituent any modification.
Term used herein " nuclear base " refers to the base portion of nucleoside or nucleotide.The nuclear base can comprise any hydrogen-bonded atom or atomic group can take place with the base of another nucleic acid.
Term used herein " heterocyclic base moiety " refers to comprise heterocyclic nuclear base.
Term used herein " deoxyribonucleotide " means the nucleotide that has hydrogen in 2 ' position of the sugar moieties of nucleotide.Deoxyribonucleotide can be with multiple substituent any modification.
Term used herein " ribonucleotide " means the nucleotide that has hydroxyl in 2 ' position of the sugar moieties of nucleotide.Ribonucleotide can be with multiple substituent any modification.
Term used herein " oligomeric compounds " refer to comprise two or more substructures (sub-structure) and can with the poly structure of certain area hybridization of nucleic acid molecules.In certain embodiments, oligomeric compounds is an oligonucleoside.In certain embodiments, oligomeric compounds is an oligonucleotide.In certain embodiments, oligomeric compounds is an antisense compounds.In certain embodiments, oligomeric compounds is an antisense oligonucleotide.In certain embodiments, oligomeric compounds is short antisense compounds.In certain embodiments, oligomeric compounds is short antisense oligonucleotide.In certain embodiments, oligomeric compounds is a chimeric oligonucleotide.
Term used herein " monomer " refers to the single unit of oligomer.Monomer includes but not limited to nucleoside and nucleotide, no matter is natural or modified.
" oligonucleoside " used herein wherein connects the oligonucleotide that key does not contain phosphorus atoms between nucleoside.
Term used herein " oligonucleotide " refers to comprise the oligomeric compounds of a plurality of nucleotide that link together.In certain embodiments, the one or more nucleotide in the oligonucleotide are modified.In certain embodiments, oligonucleotide comprises ribonucleic acid (RNA) or DNA (deoxyribonucleic acid) (DNA).In certain embodiments, oligonucleotide is made up of natural and/or non-natural nuclear base, sugar and covalency internucleotide linkage (internucleotide linkage), and also can comprise non-nucleic acid conjugate (conjugate).
" internucleotide linkage " used herein refers to that the covalency between the adjacent nucleotide connects key.
Term used herein " Dan Julian key " refers to that two covalency between the monomer connect key.The Dan Julian key includes but not limited to connect key between internucleotide linkage and nucleoside.
" connecting key between natural nucleotide " used herein refers to that 3 '-5 ' di-phosphate ester connects key.
Term used herein " antisense compounds " refers to the target nucleic acids molecule of hybridizing with it complementary oligomeric compounds to the small part.In certain embodiments, antisense compounds can be regulated the expression of (improve or reduce) target nucleic acids.Antisense compounds includes but not limited to following chemical compound: the chimeric combination of oligonucleotide, oligonucleoside, oligonucleotide analogs, oligonucleotide mimetic and these chemical compounds (chimeric combination).Therefore, though all antisense compounds all are oligomeric compounds, not every oligomeric compounds all is an antisense compounds.
Term used herein " antisense oligonucleotide " refers to belong to the antisense compounds of oligonucleotide.
Term used herein " parent antisense oligonucleotide " refers to have the oligonucleotide deoxidation interval region, 20 nucleotide of length, this deoxidation interval region has 10 2 '-deoxyribonucleotides, both sides respectively are connected to first and second pterions, each pterion has 52 '-O-(2-methoxy ethyl) ribonucleotides (5-10-5MOE gapmer), and this oligonucleotide comprises the sequence of corresponding short antisense compounds as parent.
Term used herein " short antisense compounds " refers to about 8,9,10,11,12,13,14,15 or 16 the monomeric antisense compounds of length.In certain embodiments, lack antisense compounds and have at least one high-affinity modification.
Term used herein " short antisense oligonucleotide " refers to the antisense oligonucleotide of about 8,9,10,11,12,13,14,15 or 16 nucleotide of length.In certain embodiments, lack antisense oligonucleotide and have at least one high-affinity modification.
Term used herein " short gapmer " refers to so short antisense oligonucleotide, and it has length is 2-14 the interval region of examining base for first and second pterions of 1-3 nucleotide and length independently separately.
Term used herein " die body " refers to the pattern (pattern) of not modified and modified nucleotide in the short antisense compounds.
Term used herein " chimeric antisense oligomers " refers to such antisense oligomeric compounds, connect between its at least one sugar, nuclear base or nucleoside the suffered modification of key with its in the middle of at least one other sugar, nuclear base or nucleoside between connect key and compare variant.Connecting key between remaining sugar, nuclear base and nucleoside can be modified or do not modified independently, identical or different.
Term used herein " chimeric antisense oligonucleotide " refers to such antisense oligonucleotide, connect between its at least one sugar, nuclear base or nucleoside the suffered modification of key with its in the middle of at least one other sugar, nuclear base or nucleoside between connect key and compare variant.Connecting key between remaining sugar, nuclear base and nucleoside can be modified or do not modified independently, identical or different.
Term used herein " mixed matrix antisense oligonucleotide " refers to such antisense oligonucleotide, has wherein that to connect at least one other internucleotide linkage of key and its between at least one nucleoside different.
Term used herein " target " refers to the protein that need regulate.
Term used herein " target gene " refer to the to encode gene of target.
Term used herein " target nucleic acids " and the nucleic acid molecules of target " coding " refer to its expression or the active any nucleic acid molecules that can regulate by antisense compounds.Target nucleic acids includes but not limited to from the RNA (including but not limited to pre-mRNA and mRNA or their part) that transcribes of DNA of coding target, and spreads out from the cDNA of this RNA and miRNA.For example, target nucleic acids can be that it expresses the cytogene relevant with specific disease or the morbid state mRNA of this genetic transcription (or from), perhaps from the nucleic acid molecules of infectious agent.
Term used herein " targeting " refers to the association in the specific nucleotide zone in the middle of antisense compounds and particular target nucleic acid molecules or the target nucleic acids molecule.
Term used herein " 5 ' target site " refer in the target nucleic acids with the complementary nucleotide of 5 ' of specific antisense compounds-least significant end (most) nucleotide.
Term used herein " 3 ' target site " refer in the target nucleic acids with the complementary nucleotide of 3 ' of specific antisense compounds-least significant end (most) nucleotide.
Term used herein " target zone (target region) " refer in the target molecules with the complementary part of one or more antisense compounds.
Term used herein " target section (target segment) " refers to the more fraction or the inferior part in certain zone in the middle of the target nucleic acids.
Term used herein " nuclear base complement " refers to and can examine the nuclear base that base is carried out base pairing with another.For example, in DNA, adenine (A) and thymus pyrimidine (T) complementation.For example, in RNA, adenine (A) and uracil (U) complementation.In certain embodiments, complementary nuclear base refers to the nuclear base that can carry out base pairing with the nuclear base of its target nucleic acids in the antisense compounds.For example, if the nuclear base of certain position of antisense compounds can with the nuclear base generation hydrogen bonding of certain position of target nucleic acids, think that then the hydrogen-bonded position between this oligonucleotide and this target nucleic acids is complementary for this nuclear base pair.
Term used herein " incomplementarity nuclear base " refers to a pair of like this nuclear base, and they can not form hydrogen bond mutually or otherwise support hybridization.
Term used herein " complementation " refers to that oligomeric compounds is by examining the ability of base complement and another oligomeric compounds or nucleic acid hybridization.In certain embodiments, can stablize associating nuclear base between antisense compounds and the target thereof when occupied when relevant position that antisense compounds and its target have sufficient amount separately in the molecule is made by bonding mutually, antisense compounds and target thereof are just complementary mutually.Those of skill in the art will recognize that to comprise and do not eliminate the mispairing that oligomeric compounds keeps the ability of association state, this is possible.Therefore, antisense compounds described herein can comprise about 20% mispairing nucleotide (promptly not being and the complementary nuclear base of the corresponding nucleotide of target) at most.Preferably, antisense compounds contain be no more than about 15%, more preferably no more than about 10%, be most preferably not exceeding 5% mispairing or do not contain mispairing.Remaining nucleotide is complementary nuclear base, otherwise is exactly the nuclear base (for example universal base) that can not destroy hybridization.Those of ordinary skills will appreciate that, chemical compound that this paper provided and target nucleic acids 80%, at least 85%, at least 90%, at least 95%, at least 96%, at least 97%, at least 98%, at least 99% or 100% complementation.
Term used herein " mispairing " refers to the incomplementarity nuclear base in the middle of the complementary oligomeric compounds.
" hybridization " used herein means the pairing of complementary oligomeric compounds (for example antisense compounds and its target nucleic acids).Though do not want to be confined to concrete mechanism, prevailing pairing mechanism relates to the hydrogen bonding between complementary nucleoside base or the nucleotide base (nuclear base), and it can be Watson-Crick, Hoogsteen or trans Hoogsteen hydrogen bonding.For example, natural bases adenine is and natural nucleus base thymidine and the complementary nuclear base of uracil that they match by forming hydrogen bond.Natural base guanine is and natural base cytosine and the complementary nuclear base of 5-methylcytosine.Hybridization can occur under different situations.
This ability of the affinity that the affinity that term used herein " specific hybrid " refers to oligomeric compounds and the hybridization of nucleic acid site is hybridized greater than its and another nucleic acid site.In certain embodiments, antisense oligonucleotide and target locus specificity hybridization above one.
" design " used herein, " being designed to " refer to design can with the process of the oligomeric compounds of selected nucleic acid molecules specific hybrid.
Term used herein " adjusting " refers to compare with regulating preceding function or active level, and disturbance (perturbation) has taken place for function or activity.For example, regulate the variation comprise gene expression, this variation can be to improve (stimulate or induce) or reduce (suppress or reduce).As further example, the adjusting of expression comprises selects in addition disturbance to the splice site of pre-mRNA processing.
Term used herein " expression " refers to that all convert the encoding information of gene to the function and the step of the structure that exists and operate according to this in cell.This structure includes but not limited to the product transcribing and translate.
" variant " used herein refers to can be from the alternative rna transcription thing of identical DNA genome area generation.Variant includes but not limited to " pre-mRNA variant ", and this transcript and other transcript differences that produce from identical genomic DNA are their initial or final position, and this transcript contains intron sequences and exon sequence.Variant also includes but not limited to have alternately splice junction or alternately those variants of initial sum termination codon.
" through the monomer of high-affinity modification " used herein refers to such monomer, it is compared with natural monomer to have between at least one modified nuclear base, nucleoside and connects key or sugar moieties, and the result should modify to improve and comprise through the monomeric antisense compounds of high-affinity modification and the affinity of its target nucleic acids.High-affinity is modified the monomer (for example nucleoside and nucleotide) that includes but not limited to comprise through the sugar of 2 '-modification.
Term used herein " through 2 '-modify " or " 2 '-replace " mean the substituent sugar that comprises in 2 ' position outside H or the OH.Monomer through 2 '-modification includes but not limited to have such as 2 ' following-substituent BNA and monomer (for example nucleoside and nucleotide): pi-allyl, amino, azido, thio group, O-pi-allyl, O-C1-C10Alkyl ,-OCF3, O-(CH2)2-O-CH3, 2 '-O (CH2)2SCH3, O-(CH2)2-O-N (Rm) (Rn) or O-CH2-C (=O)-N (Rm) (Rn), each R whereinmAnd RnIndependent is H or substituted or unsubstituted C1-C10Alkyl.In certain embodiments, lacking antisense compounds comprises and does not have formula 2 '-O (CH2)n2 ' of H-modification monomer, wherein n is 1-6.In certain embodiments, lacking antisense compounds comprises and does not have formula 2 '-OCH32 '-modify monomer.In certain embodiments, lacking antisense compounds comprises and does not have formula 2 '-O (CH2)2OCH32 '-modify monomer.
Term used herein " dicyclo nucleic acid " or " BNA " or " bicyclic nucleoside " or " dicyclic ring thuja acid " refer to such nucleoside or nucleotide, wherein the furanose of nucleoside partly comprises the abutment that connects two carbon atoms on the furanose ring, thereby forms the dicyclo ring system.
Term used herein " methylene oxygen base BNA " refers to β-D-methylene oxygen base BNA alone, unless otherwise.
Term used herein " MOE " refers to 2 '-methoxy ethyl substituent group.
Term used herein " gapmer " refers to so chimeric oligomeric compounds, the zone (" pterion ") that it comprises middle section (" (gap) at interval ") and is positioned at the middle section both sides, wherein this comprises at least one modification different with the modification in each pterion at interval.This modification comprises that nuclear base modification, Dan Julian key (monomeric linkage) are modified and is sugar-modified and do not have a modification (not modified).Therefore, in certain embodiments, the nucleotide in each pterion connects key and nucleotide at interval, and to connect key different.In certain embodiments, each pterion comprises the nucleotide that has through the high-affinity modification, then comprises at interval not have this modified nucleotide.In certain embodiments, the nucleotide in and the nucleotide in the pterion all comprise the high-affinity modification at interval, but the modification of the high-affinity is at interval modified different with the high-affinity in the pterion.In certain embodiments, the modification in the pterion is identical mutually.In certain embodiments, the modification in the pterion is different mutually.In certain embodiments, the nucleotide in is not modified at interval, and the nucleotide in the pterion is modified.In certain embodiments, the modification in each pterion is identical.In certain embodiments, the modification in pterion is different with the modification in another pterion.In certain embodiments, lacking antisense compounds is the gapmer that has 2 '-deoxyribonucleotide and have the nucleotide of modifying through high-affinity in the interval in the pterion.
Term used herein " prodrug " refers to such therapeutic agent, and it prepares with inactive form, and the effect by endogenous enzymes or other chemical substances and/or condition in the middle of health or its cell changes into activity form (being medicine).
Term used herein " the acceptable salt of medicine " refers to the salt of reactive compound, and this salt can keep the required biological activity of reactive compound, does not give unwanted toxicology effect to reactive compound again.
Term used herein " cap " or " distal end cap part " refer to the chemical modification that the arbitrary end at antisense compounds mixes.
Term used herein " prevention " refers to the outbreak of disease or disease or development postponed or stops several hrs to several days, time of preferred several thoughtful some months.
Term used herein " improvement " refers to alleviate at least one indication (indicator) of disease or severity of disease.The seriousness indication can be measured by well known to a person skilled in the art subjectivity or objective measurement approach.
Term used herein " treatment " is showed and is given change or the improvement that compositions of the present invention realizes disease or disease.Prevention, improvement and/or treatment may require termly or give multidose before disease or disease outbreak, to change the process of disease or disease.In addition, single medicament can be used for single individuality, with sequential ground or side by side carry out each prevention, improvement and the treatment of disease or disease.
Term used herein " medicament " refers to can provide the material of curative effect when giving the experimenter.
Term used herein " treatment effective dose " refers to provide the amount of the medicament of curative effect to animal.
" giving " used herein refers to medicament is offered animal, includes but not limited to give to give with the oneself by the medical professional.
Term used herein " gives " to refer to give animal with two or more medicaments altogether.These two or more medicaments can be in single pharmaceutical composition, perhaps can be respectively in independent pharmaceutical composition.Each of these two or more medicaments can give by the identical or different approach that gives.Contain parallel giving or sequential giving altogether.
Term used herein " pharmaceutical composition " refers to be suitable for giving the mixture of each individual material.For example, pharmaceutical composition can comprise antisense oligonucleotide and aseptic aqueous solution.
Term used herein " individuality " refers to selected people or the non-human animal who treats and participate in therapy.
Term used herein " animal " refers to people or non-human animal, includes but not limited to mice, rat, rabbit, Canis familiaris L., cat, pig and non-human primate, includes but not limited to monkey and chimpanzee.
Term used herein " experimenter " refers to be given the animal of pharmaceutical composition, includes but not limited to the people.
Term used herein " persistent period " refers to the period that activity or incident continue.In certain embodiments, the treatment persistent period is the period that gives each dosage of medicament.
Term used herein " parenteral gives " refers to give by injection or infusion.Parenteral includes but not limited to subcutaneously give, intravenous gives or or intramuscular give.
Make a comment or criticism gives below skin term used herein " subcutaneous giving "." intravenous gives " means and is administered in the vein.
Term " dosage " used herein (dose) " specified amount of the medicament that refers in single gives to be provided.In certain embodiments, dosage can or repeatedly be injected agent (bolus), tablet or injection and gives with twice.For example, need in the subcutaneous embodiment that gives at some, the desired volume of required dosage is not easy to supply by single injection.In this embodiment, can adopt twice or multiple injection reaches required dosage.In certain embodiments, dosage can give with twice or multiple injection, so that the injection site reaction in the individuality minimizes.
Term " dosage " unit used herein (dosage unit) " refer to provide according to this form of medicament.In certain embodiments, dosage unit is the bottle (vial) that comprises freeze dried antisense oligonucleotide.In certain embodiments, dosage unit is the bottle that comprises (reconstituted) antisense oligonucleotide of redissolution.
Term used herein " medicament " refers to can provide the material of curative effect when giving individuality.For example, in certain embodiments, antisense oligonucleotide is a medicament.
Term used herein " active pharmaceutical ingredient " refers to the material that required effect can be provided in the pharmaceutical composition.
Term used herein " treatment effective dose " refers to provide the amount of the medicament of curative effect to individuality.In certain embodiments, the treatment effective dose of antisense compounds is to need to give the amount that is produced observable effects.
Term used herein " hypercholesterolemia " refers to the serum cholesterol rising to be the disease of feature.
Term used herein " hyperlipemia " refers to the serum lipids rising to be the disease of feature.
Term used herein " hypertriglyceridemia " refers to the triglyceride levels rising to be the disease of feature.
Term used herein " non-familial hypercholesterolemia " refers to that not to be that the result's of single genetic gene mutation cholesterol raises be the disease of feature.
Term used herein " polygenes hypercholesterolemia " refers to that it is the disease of feature that the cholesterol that causes with the influence by multiple inherited genetic factors raises.In certain embodiments, the polygenes hypercholesterolemia can be by the meals of lipid picked-up aggravation.
Term used herein " familial hypercholesterolemia (FH) " refers to LDL-receptor (LDL-R) gene mutation, LDL-C significantly raises and atherosclerosis outbreak too early is the autosomal dominant metabolic disease of feature.When individuality meets one of following standard or make a definite diagnosis the generation familial hypercholesterolemia when multinomial: genetic test is confirmed the LDL-acceptor gene of 2 sudden changes; Genetic test is confirmed the LDL-acceptor gene of 1 sudden change; Medical history record has the LDL-cholesterol of the untreated 500mg/dL of surpassing; Xanthoma tendinosum and/or xanthomata cutis took place before 10 years old; Perhaps parents have the record that the serum LDL-cholesterol before the lipid consistent with the heterozygous familial hypercholesterolemia reduces therapy raises.
Term used herein " familial hypercholesterolemia isozygotys " or " HoFH " refer to have with father and mother both sides' LDL-R gene the disease of the feature of sporting.
Term used herein " heterozygous familial hypercholesterolemia " or " HeFH " refer to that the LDL-R gene with father and mother one side has the disease of the feature of sporting.
It is the disease of feature that term used herein " Combination dyslipidemia " refers to raise with serum cholesterol rising and serum triglycerides.
It is the disease of feature that term used herein " diabetic dyslipidemia " or " type ii diabetes companion dyslipidemia " refer to increase with type ii diabetes, HDL-C minimizing, serum triglycerides rising and small and dense LDL granule.
What term used herein " CHD risk equipotential outbreak (risk equivalent) " referred to clinical atheromatosis brings high risk indication to coronary heart disease.For example, in certain embodiments, the outbreak of CHD risk equipotential includes but not limited to the aneurysm of clinical crown cardiopathia, symptom type carotid disease, peripheral arterial disease and/or abdominal aorta.
Term used herein " non-alcoholic fatty liver disease (NAFLD) " refers to that the liver fat inflammation not cause because of abuse of alcohol (for example alcohol consumption was above 20g/ days) is the disease of feature.In certain embodiments, NAFLD is relevant with insulin resistance and metabolism syndrome.
Term used herein " non-alcoholic stellato-hepatitis (NASH) " refers to that with the inflammation that does not cause because of alcohol abuse in the liver and fat and fibrosis tissue accumulation be the disease of feature.
NASH is the extreme form of NAFLD.
Term used herein " major risk factors " refers to facilitate the high risk factor of specified disease or disease.In certain embodiments, the major risk factors of coronary heart disease includes but not limited to smoking, hypertension, low HDL-C, familial history of coronary artery disease and age.
Term used herein " CHD risk factor " refers to outbreak of CHD risk equipotential and major risk factors.
Term used herein " coronary heart disease (CHD) " show heart blood supply and oxygen supply little blood vessel narrow this atherosclerotic often result.
Term used herein " coronary heart disease risk attenuating " refers to an attenuating of knowing from experience the probability of development coronary heart disease.In certain embodiments, the attenuating of coronary heart disease risk is that improvement (for example reduction of LDL-C level) by one or more CHD risk factor is measured.
Term used herein " atherosclerosis " refers to existing for of fatty deposits arteriosclerosis feature, that influence large artery trunks and medium-sized artery.Fatty deposits is called " tremulous pulse medicated porridge sample tumor (atheroma) " or " speckle (plaque) ", and it mainly is made up of cholesterol and other fat, calcium and scar tissue, can damage the tremulous pulse lining.
Term used herein " coronary disease medical history " refers to tangible clinically coronary heart disease, and a situation arises in individuality or individual family member's medical history.
Term used herein " coronary heart disease of early showing effect " refers to make a definite diagnosis coronary heart disease before 50 years old.
Term used herein " inhibin does not tolerate individuality " refers to such individuality, and creatine kinase increases because the inhibin therapy can experience for he, the liver function test is unusual, in myalgia or the central nervous system's side effect one or multinomial.
Term used herein " effect " refers to produce the ability of required effect.For example, lipid reduces the attenuating that the effect of therapy can be in LDL-C, VLDL-C, IDL-C, non-HDL-C, ApoB, lipoprotein (a) or the triglyceride or multinomial concentration.
" acceptable security feature (safety profile) refers to the side effect pattern in the middle of clinical acceptable limit to term used herein.
Term used herein " side effect " refers to the physiological reaction outside the effect that be attributable to treat, required.In certain embodiments, side effect includes but not limited to that the test of injection site reaction, liver function is unusual, renal dysfunction, hepatotoxicity, Toxicity of Kidney, the central nervous system is unusual and myopathy.For example, the raising of transamination enzyme level can be represented hepatotoxicity or abnormal liver function in the serum.For example, the bilirubin raising can be represented hepatotoxicity or abnormal liver function.
Term used herein " injection site reaction " refers to the chafing of individual injection site or rubescent unusually.
Term used herein " individual compliance " refer to individual to recommend or the adhering to of specified therapy.
Term used herein " lipid reduction therapy " refers to offer individual to reduce the therapeutic scheme of one or more lipids in the individuality.In certain embodiments, provide lipid to reduce therapy to reduce among ApoB in the individuality, T-CHOL, LDL-C, VLDL-C, IDL-C, non-HDL-C, triglyceride, small and dense LDL granule and the Lp (a) one or more.
Term used herein " lipid reduction medicament " refers to offer individual medicament with the reduction that realizes the lipid in the individuality.For example, in certain embodiments, lipid is reduced medicament offer individual to reduce in ApoB, LDL-C, T-CHOL and the triglyceride one or more.
Term used herein " LDL-C target " refers to that lipid reduces needed LDL-C level after the therapy.
Term used herein " is comply with " and is referred to that individuality adheres to the therapy of being recommended.
Term used herein " therapy of being recommended " refers to that the medical professional recommends to treat, improvement or prophylactic therapeutic scheme.
Term used herein " low LDL-receptor active " refers to the enough not high LDL-receptor active that must keep the clinically acceptable level of LDL-C in blood flow.
Term used herein " cardiovascular consequence " refers to the appearance of great disadvantageous cardiovascular event.
Term used herein " improved cardiovascular consequence " refers to the minimizing of the appearance of great disadvantageous cardiovascular event or its risk.The example of great disadvantageous cardiovascular event includes but not limited to death, re-infarction, apoplexy, cardiogenic shock, pulmonary edema, asystole and atrial arrhythmia.
Term used herein " surrogate markers of cardiovascular consequence " refers to the indirect indication of cardiovascular event or its risk.For example, the surrogate markers of cardiovascular consequence comprises carotid intimal medial thickness (CIMT).Another example of the surrogate markers of cardiovascular consequence comprises tremulous pulse medicated porridge sample tumor size.The big I of tremulous pulse medicated porridge sample tumor is measured by intravascular ultrasound (IVUS).
Term used herein " HDL-C raising " refers to Serum HDL-C raising in time in the individuality.
Term used herein " lipid reduction " refers to one or more serum lipids reduction in time in the individuality.
Term used herein " metabolic disease " refers to that with the change of metabolic function or disturbance be the disease of feature." metabolic " and " metabolism " is term well known in the art, generally comprises the whole biochemical process that occurs in the middle of the live organism.Metabolic disease includes but not limited to hyperglycemia, prediabetes, diabetes (I type and II type), obesity, insulin resistance and metabolism syndrome.
Term used herein " metabolism syndrome " refers to metabolic lipid of originating from of a monoid and non-lipid cardiovascular risk factors.It and vague generalization (generalized) metabolic disease that is called insulin resistance are closely linked.U.s. national cholesterol education program (National Cholesterol Education Program, NCEP) (Adult Treatment Panel III ATPIII) has set up the standard of diagnosing metabolism syndrome when having three or more to exist in five risk determiners to adult treatment expert scheme III.These five risk determiners are, with the abdominal obesity of waistline definition, the man is greater than 102cm, and the woman is greater than 88cm; Triglyceride levels is more than or equal to 150mg/dL; The HDL cholesterol levels, the man is less than 40mg/dL, and the woman is less than 50mg/dL; Blood pressure is more than or equal to 130/85mm Hg; With the fasting glucose level more than or equal to 110mg/dL.These determiners in clinical practice, can measure easily (JAMA, 2001,285:2486-2497).
Term used herein " alkyl " refers to contain the saturated straight chain or the branched-chain hydrocarbons group of maximum 24 carbon atoms.The example of alkyl group includes but not limited to methyl, ethyl, propyl group, butyl, isopropyl, n-hexyl, octyl group, decyl, dodecyl etc.Alkyl group generally includes 1 to about 24 carbon atoms, and more generally 1 to about 12 carbon atom (C1-C12Alkyl), more preferably 1 to about 6 carbon atoms.Term used herein " low alkyl group " comprises 1 to about 6 carbon atoms.Alkyl group used herein can be chosen wantonly and comprise one or more other substituent groups.
Saturated straight chain or side chain hydrocarbon chain group that term used herein " thiazolinyl " refers to contain maximum 24 carbon atoms and has at least one carbon-to-carbon double bond.The example of alkenyl group includes but not limited to vinyl, acrylic, cyclobutenyl, 1-methyl-2-butene-1-base, diene such as 1,3-butadiene etc.Alkenyl group generally includes 2 to about 24 carbon atoms, and more generally 2 to about 12 carbon atoms, and more preferably 2 to about 6 carbon atoms.Alkenyl group used herein can be chosen wantonly and comprise one or more other substituent groups.
Saturated straight chain or branched-chain hydrocarbons group that term used herein " alkynyl " refers to contain maximum 24 carbon atoms and has at least one carbon-to-carbon triple bond.The example of alkynyl includes but not limited to acetenyl, 1-propinyl, ethyl acetylene base etc.Alkynyl group generally includes 2 to about 24 carbon atoms, and more generally 2 to about 12 carbon atoms, and more preferably 2 to about 6 carbon atoms.Alkynyl group used herein can be chosen wantonly and comprise one or more other substituent groups.
Term used herein " aminoalkyl " refers to the amino alkyl group that replaces.This term mean be included in any position have amino substituent group and wherein alkyl group connect the C of key by amino group and parent molecule1-C12Alkyl group.The moieties of aminoalkyl groups and/or amino part can further be substituted base and replace.
Term used herein " aliphatic series " refers to contain maximum 24 carbon atoms, wherein the saturation between any two carbon atoms is singly-bound, two key or triple-linked straight or branched hydrocarbyl group.Aliphatic group preferably includes 1 to about 24 carbon atoms, and more generally 1 to about 12 carbon atoms, and more preferably 1 to about 6 carbon atoms.The straight or branched of aliphatic group can be interrupted by one or more hetero atoms of nitrogen, oxygen, sulfur and phosphorus that comprise.This aliphatic group that is interrupted by hetero atom includes but not limited to poly-alkoxyl (as the polyoxygenated alkylene), polyamine and poly-imines.Aliphatic group used herein can be chosen wantonly and comprise other substituent group.
Term " alicyclic ring " or " alcyl " refer to that ring wherein belongs to aliphatic ring system.This ring system can comprise one or more rings, and wherein at least one ring is aliphatic.Preferred alicyclic ring comprises wherein having about 5 rings to about 9 carbon atoms.Alicyclic ring used herein can be chosen wantonly and comprise other substituent group.
Term used herein " alkoxyl " refers to the group that forms between alkyl group and oxygen atom, wherein this oxygen atom is in order to be connected alkoxy base with parent molecule.The example of alkoxyl includes but not limited to methoxyl group, ethyoxyl, propoxyl group, isopropoxy, n-butoxy, sec-butoxy, tert-butoxy, n-pentyloxy, neopentyl oxygen, positive hexyloxy etc.Alkoxy base used herein can be chosen wantonly and comprise other substituent group.
Term used herein " halogen " and " halogen " refer to be selected from the atom of fluorine, chlorine, bromine and iodine.
Term used herein " aryl " and " aromatics " refer to have the monocycle or the multi-ring carbon-loop system group of one or more aromatic rings.The example of aromatic yl group includes but not limited to phenyl, naphthyl, tetralyl, indanyl, indenyl (idenyl) etc.The preferred aryl groups ring system has about 5 to about 20 carbon atoms in one or more rings.Aromatic yl group used herein can be chosen wantonly and comprise other substituent group.
Term used herein " aralkyl " and " aryl alkyl " refer to the group that forms between alkyl group and aromatic yl group, wherein alkyl group is in order to be connected aromatic alkyl group with parent molecule.Example includes but not limited to benzyl, phenethyl etc.Aromatic alkyl group used herein can be chosen wantonly and comprise the other substituent group that is connected with alkyl group, aromatic yl group or this two groups of constituting described group.
Term used herein " heterocyclic group " refers to such basic (radical) monocycle or polycyclic aromatic ring system, and it comprises at least one hetero atom and be undersaturated, fractional saturation or fully saturated, thereby comprises heteroaryl groups.Heterocyclic group also means and comprises such condensed ring system, and wherein one or more condensed ring contain at least one hetero atom, and other ring can contain one or more hetero atoms or the optional hetero atom that do not contain.Heterocyclic group generally includes at least one atom that is selected from sulfur, nitrogen or oxygen.The example of heterocyclic group comprises [1,3] dioxolanes, pyrrolidinyl, pyrazolinyl, pyrazolidinyl, imidazolinyl, imidazolidinyl, piperidyl, piperazinyl, oxazolidinyl, isoxazole alkyl, morpholinyl, thiazolidinyl, isothiazole alkyl, quinoxalinyl, pyridazine ketone group, tetrahydrofuran base etc.Heterocyclic group used herein can be chosen wantonly and comprise other substituent group.
Term used herein " heteroaryl " and " heteroaromatic " refer to comprise the group of monocycle or multi-ring aromatic ring ring system or condensed ring system, wherein at least one ring be aromatics and comprise one or more hetero atoms.Heteroaryl also means and comprises the condensed ring system, comprises that wherein one or more condensed ring do not contain heteroatomic system.Heteroaryl groups generally includes an annular atoms that is selected from sulfur, nitrogen or oxygen.The example of heteroaryl groups includes but not limited to pyridine radicals, pyrazinyl, pyrimidine radicals, pyrrole radicals, pyrazolyl, imidazole radicals, thiazolyl, oxazolyl, isoxazolyl, thiadiazolyl group, oxadiazole base, thienyl (thiophenyl), furyl, quinolyl, isoquinolyl, benzimidazolyl, benzoxazolyl, quinoxalinyl etc.Heteroaryl groups can be directly or is connected with parent molecule by coupling part such as aliphatic group or hetero atom.Heteroaryl groups used herein can be chosen wantonly and comprise other substituent group.
" heteroaryl alkyl " used herein refers to have the heteroaryl groups that the front defines of alkyl group, and this alkyl group can be connected the heteroaryl alkyl group with parent molecule.Example includes but not limited to pyridylmethyl, pyrimidinylethyl, naphthyridinyl propyl group etc.Heteroaryl alkyl group used herein can be chosen in heteroaryl moieties or moieties one or comprise other substituent group on two simultaneously wantonly.
Term used herein " monocycle or multiring structure " comprises all monocycles or polycyclic ring system, wherein multi-ring have a ring that condenses or link together, and this term means and comprises the monocycle that is selected from aliphatic group, alicyclic group, aryl, heteroaryl, aralkyl, aryl alkyl, heterocyclic group, heteroaryl, heteroaromatic group, heteroaryl alkyl separately and mix ring system.This monocycle or multiring structure can contain the ring that the same ring or degree of saturation have nothing in common with each other, and comprise saturated fully, fractional saturation or fully unsaturated.Each ring can comprise the ring of annular atoms to produce heterocycle and only to comprise the C annular atoms that is selected from C, N, O and S, this can exist in the mixing die body (mixied motif) of for example benzimidazole, one of them ring only has carboatomic ring atom, and condensed ring then has two nitrogen-atoms.Monocycle or multiring structure can further be substituted base and replace, phthalimide for example, and it has two=O group and is connected with one of them ring.In yet another aspect, monocycle or multiring structure can directly pass through annular atoms, be connected with parent molecule by substituent group or difunctional coupling part.
Term used herein " acyl group " refers to that organic acid removes the formed group of hydroxyl, and it has general formula-C (O)-X, wherein X normally aliphatic series, alicyclic or aromatics.Example comprises aliphatic carbonyl, aromatics carbonyl, aliphatic sulfonyl, aromatics sulfinyl, aliphatic sulfinyl, aromatics phosphoryl (aromatic phosphate), aliphatic phosphoryl (aliphatic phosphate) etc.Carboxyl groups used herein can be chosen wantonly and comprise other substituent group.
Term " alkyl " comprises the group that comprises C, O and H.Comprise straight chain group, branched group and cyclic group with any degree of saturation.This hydrocarbyl group can comprise the hetero atom of one or more N of being selected from, O and S, and can be further by the single replacement of one or more substituent groups or polysubstituted.
Term used herein " substituent group " comprises and is added to other groups or parent compound usually to strengthen required characteristic or to produce the group of required effect.Substituent group can be protected or not protected, and of can be added in the parent compound can add angle of striking or a plurality of angle of striking that adds.Substituent group also can further be replaced by other substituent groups, and can directly or by the linking group such as alkyl group or hydrocarbyl group be connected with parent compound.This substituent group includes but not limited to halogen, hydroxyl, alkyl, thiazolinyl, alkynyl, acyl group (C (O) RAa), carboxyl (C (O) O-RAa), aliphatic group, alicyclic group, alkoxyl, substituted oxo base (O-RAa), aryl, aralkyl, heterocyclic radical, heteroaryl, heteroaryl alkyl, amino (NRBbRCc), imino group (=NRBb), amide groups (C (O) NRBbRCcOr-N (RBb) C (O) RAa), azido (N3), nitro (NO2), cyano group (CN), carbamoyl (OC (O) NRBbRCcOr-N (RBb) C (O)-ORAa), urea groups (N (RBb) C (O) NRBbRCc), ghiourea group (N (RBb) C (S) NRBbRCc), guanidine radicals (N (RBb) C (=NRBb) NRBbRCc), amidino groups (C (=NRBb) NRBbRCcOr-N (RBb) C (NRBb) RAa), mercaptan (SRBb), sulfinyl (S (O) RBb), sulfonyl (S (O)2RBb), sulfoamido (S (O)2NRBbRCcOr-N (RBb) S (O)2RBb) and conjugated group.Each R whereinAa, RBbAnd RCcIndependent is H, the optional chemical functional group who connects or other substituent group, and preferred list includes but not limited to H, alkyl, thiazolinyl, alkynyl, aliphatic group, alkoxyl, acyl group, aryl, aralkyl, heteroaryl, alicyclic group, heterocyclic group and heteroaryl alkyl.
B. some oligomeric compounds
In certain embodiments, than natural oligomer such as DNA or RNA, need carry out chemical modification to oligomeric compounds.Some this modification can change the activity of oligomeric compounds.Some this chemical modification can for example change activity in the following manner: improve the affinity of antisense compounds to its target nucleic acids, improve it to the resistance of one or more nucleases and/or the pharmacokinetics or the tissue distribution of change oligomeric compounds.In some cases, adopt chemical method to improve the affinity of oligomeric compounds, can make and to use short oligomeric compounds its target.
1. some monomer
In certain embodiments, oligomeric compounds comprises one or more modified monomers.In certain embodiments, oligomeric compounds comprises one or more high-affinity monomers.In certain embodiments, this high-affinity monomer is selected from the monomer (for example nucleoside and nucleotide) that comprises through the sugar of 2 '-modification, includes but not limited to have such as 2 ' following-substituent BNA and monomer (for example nucleoside and nucleotide): pi-allyl, amino, azido, thio group, O-pi-allyl, O-C1-C10Alkyl ,-OCF3, O-(CH2)2-O-CH3, 2 '-O (CH2)2SCH3, O-(CH2)2-O-N (Rm) (Rn) or O-CH2-C (=O)-N (Rm) (Rn), each R whereinmAnd RnIndependent is H or substituted or unsubstituted C1-C10Alkyl.
In certain embodiments, include but not limited to that short antisense compounds comprises one or more high-affinity monomers at interior oligomeric compounds of the present invention, condition is that this oligomeric compounds does not include and comprises 2 '-O (CH2)nThe nucleotide of H, wherein n is 1-6.
In certain embodiments, include but not limited to that short antisense compounds comprises one or more high-affinity monomers at interior oligomeric compounds of the present invention, condition is that this oligomeric compounds does not include and comprises 2 '-OCH3Or 2 '-O (CH2)2OCH3Nucleotide.
In certain embodiments, include but not limited to that short antisense compounds comprises one or more high-affinity monomers at interior oligomeric compounds of the present invention, condition is that this oligomeric compounds does not include α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA.
In certain embodiments, include but not limited to that short antisense compounds comprises one or more high-affinity monomers at interior oligomeric compounds of the present invention, condition is that this oligomeric compounds does not include β-D-methylene oxygen base (4 '-CH2-O-2 ') BNA.
In certain embodiments, include but not limited to that short antisense compounds comprises one or more high-affinity monomers at interior oligomeric compounds of the present invention, condition is that this oligomeric compounds does not include α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA or β-D-methylene oxygen base (4 '-CH2-O-2 ') BNA.
A. some examines base
The trona base section of nucleoside is heterocyclic base normally.This heterocyclic base of prevailing two classes is purine and pyrimidine.For the nucleoside that comprises furan pentose, phosphate group can be connected with 2 ', 3 ' or 5 ' hydroxylic moiety of sugar.When forming oligonucleotide, these phosphate groups are together covalently bound mutually with adjacent nucleoside, form the linear polymerization chemical compound.In the middle of oligonucleotide, it is to form skeleton between the nucleotide of oligonucleotide that phosphate group is said to be usually.Natural even key or the skeleton of RNA and DNA are 3 '-5 ' phosphodiester bonds.
Except " not modified " or " natural " nuclear base such as purine are examined bases adenine (A) and guanine (G) and pyrimidine nuclear base thymus pyrimidine (T), cytosine (C) and uracil (U), well known to a person skilled in the art many modified nuclear bases or examine the base analogies also to be applicable to chemical compound described herein.In certain embodiments, modified nuclear base is structurally to examine the quite proximate nuclear base of base with parent, for example 7-deazapurine, 5-methylcytosine or G-pincers (G-clamp).In certain embodiments, nuclear base analogies comprise more complicated structure, for example three Huan phenoxazines nuclear base analogies.The method for preparing above-mentioned modified nuclear base is well known to a person skilled in the art.
B. some sugar
Oligomeric compounds provided herein can comprise one or more monomers with modified sugar moieties, comprises nucleoside or nucleotide.For example, the furanose ring of nucleoside can be modified in many ways, includes but not limited to add substituent group, and two non-geminal annular atoms bridge joints form dicyclo nucleic acid (BNA).
In certain embodiments, oligomeric compounds comprises one or more BNA monomers.In some this embodiment, BNA includes but not limited to (A) α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA, (B) β-D-methylene oxygen base (4 '-CH2-O-2 ') BNA, (C) ethyleneoxy group (4 '-(CH2)2-O-2 ') BNA, (D) amino oxygen base (4 '-CH2-O-N (R)-2 ') BNA and (E) oxygen base amino (4 '-CH2-N (R)-O-2 ') BNA, as shown in Figure 1.
Figure A20078002541600311
Some BNA structure of Fig. 1
In certain embodiments, the BNA chemical compound includes but not limited to have the chemical compound of at least one abutment between 4 ' and 2 ' position of sugar, wherein each abutment independently comprise 1 or 2-4 independently be selected from-[C (R1) (R2)]n-,-C (R1)=C (R2)-,-C (R1)=N-,-C (=NR1)-,-C (=O)-,-C (=S)-,-O-,-Si (R1)2-,-S (=O)x-and-N (R1)-linking group;
Wherein:
X is 0,1 or 2;
N is 1,2,3 or 4;
Each R1And R2Independent is H, protecting group, hydroxyl, C1-C12Alkyl, substituted C1-C12Alkyl, C2-C12Thiazolinyl, substituted C2-C12Thiazolinyl, C2-C12Alkynyl, substituted C2-C12Alkynyl, C5-C20Aryl, substituted C5-C20Aryl, heterocyclic radical, substituted heterocyclic radical, heteroaryl, substituted heteroaryl, C5-C7Alcyl, substituted C5-C7Alcyl, halogen, OJ1, NJ1J2, SJ1, N3, COOJ1, acyl group (C (=O)-H), substituted acyl group, CN, sulfonyl (S (=O)2-J1) or sulfinyl (sulfoxyl) (S (=O)-J1); With
Each J1And J2Independent is H, C1-C12Alkyl, substituted C1-C12Alkyl, C2-C12Thiazolinyl, substituted C2-C12Thiazolinyl, C2-C12Alkynyl, substituted C2-C12Alkynyl, C5-C20Aryl, substituted C5-C20Aryl, acyl group (C (=O)-H), substituted acyl group, heterocyclic radical, substituted heterocyclic radical, C1-C12Aminoalkyl, substituted C1-C12Aminoalkyl or protecting group.
In one embodiment, each abutment of BNA chemical compound independently is-[C (R1) (R2)]n-,-[C (R1) (R2)]n-O-,-C (R1R2)-N (R1)-O-or-C (R1R2)-O-N (R1)-.In another embodiment, each described abutment independently is 4 '-CH2-2 ', 4 '-(CH2)2-2 ', 4 '-(CH2)3-2 ', 4 '-CH2-O-2 ', 4 '-(CH2)2-O-2 ', 4 '-CH2-O-N (R1)-2 ' and 4 '-CH2-N (R1)-O-2 '-, each R wherein1Independent is H, protecting group or C1-C12Alkyl.
Some BNA has been produced and open (Singh et al., Chem.Commun., 1998,4,455-456 in patent documentation and scientific literature; Koshkin et al., Tetrahedron, 1998,54,3607-3630; Wahlestedt et al., Proc.Natl.Acad.Sci.U.S.A., 2000,97,5633-5638; Kumar et al., Bioorg.Med.Chem.Lett., 1998,8,2219-2222; WO 94/14226; WO 2005/021570; Singh et al., J.Org.Chem., 1998,63,10035-10039.Disclose BNA authorize United States Patent (USP) and the example of published application comprise for example United States Patent (USP) 7,053,207; 6,268,490; 6,770,748; 6,794,499; 7,034,133 and 6,525,191; And the early stage publication number 2004-0171570 of the U.S.; 2004-0219565; 2004-0014959; 2003-0207841; 2004-0143114 and 20030082807.
This paper also provides such BNA, and wherein 2 ' of ribose ring-hydroxyl is connected with 4 ' carbon atom of sugar ring, thereby forms methylene oxygen base (4 '-CH2-O-2 ') Lian Jian, (summary is seen Elayadi et al., Curr.Opinion Invens.Drugs, 2001,2,558-561 to form the dicyclo sugar moieties; Braasch et al., Chem.Biol., 2001,8 1-7; With Orum et al., Curr.Opinion Mol.Ther., 2001,3,239-243; In addition referring to United States Patent (USP) 6,268,490 and 6,670,461).Connecting key can be the methylene (CH of bridge joint 2 ' oxygen atom and 4 ' carbon atom2-) group, so dicyclo is partly used term methylene oxygen base (4 '-CH2-O-2 ') BNA; As this position is the ethylidene group, then uses term ethyleneoxy group (4 '-CH2CH2-O-2 ') BNA (Singh et al., Chem.Commun., 1998,4,455-456:Morita et al., Bioorganic Medicinal Chemistry, 2003,11,2211-2226).Methylene (4 '-CH2-O-2 ') BNA and other dicyclo sugar analogues demonstrate very high with duplex heat stability complementary DNA and RNA (Tm=+3-+10 ℃), to the stability of the circumscribed degraded of 3 '-nucleic acid and good dissolution characteristics.Comprise BNA existing description of potent and nontoxic antisense oligonucleotide (Wahlestedt et al., Proc.Natl.Acad.Sci.U.S.A., 2000,97,5633-5638).
Methylene oxygen base (the 4 '-CH that had discussed2-O-2 ') BNA isomer is α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA has proved that it has splendid stability to 3 '-exonuclease.α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA be incorporated into and shown in active antisense gapmer of potent antisense and the chimera (Frieden et al., nucleic acid s Research, 2003,21,6365-6372).
Methylene oxygen base (4 '-CH2-O-2 ') existing (the Koshkin et al. that describes of the synthetic and preparation of BNA monomer adenine, cytosine, guanine, 5-methyl-cytosine, thymus pyrimidine and uracil and their oligomerization and nucleic acid recognizing characteristic, Tetrahedron, 1998,54,3607-3630).BNA and preparation thereof also have description in WO 98/39352 and WO 99/14226.
Methylene oxygen base (4 '-CH2-O-2 ') BNA analog thiophosphate-methylene oxygen base (4 '-CH2-O-2 ') BNA and 2 '-sulfo--BNA also be produced (Kumar et al., Bioorg.Med.Chem.Lett., 1998,8,2219-2222).The relevant preparation that comprises as the locking nucleoside analog of the oligodeoxyribonucleotide duplex of the substrate of nucleic acid polymerase, also existing describe (Wengel et al., WO 99/14226).In addition, this novel conformation limited (comformationally restricted) high-affinity oligonucleotide analogs of 2 '-amino-BNA synthetic also has description (Singh et al. in the art, J.Org.Chem., 1998,63,10035-10039).In addition, 2 '-amino-BNA and 2 '-methylamino-BNA has also obtained preparation, existing report before the heat stability of the duplex of they and complementary RNA chain and DNA chain.
Modified sugar moieties is known, can be used to change the affinity of (normally improving) antisense compounds and its target and/or improves the nuclease resistance.The representative list of preferred modified sugar includes but not limited to comprise methylene oxygen base (4 '-CH through the sugar (BNA) of dicyclo modification2-O-2 ') BNA and ethyleneoxy group (4 '-(CH2)2-O-2 ' abutment) BNA; Substituted sugar particularly has 2 '-F, 2 '-OCH3Or 2 '-O (CH2)2-OCH3Substituent 2 '-replacement sugar; Sugar with 4 '-thio-modification.Substituting of the also available sugar simulation of sugar group and so on.The method for preparing modified sugar is well known to a person skilled in the art.The patent and the prospectus of the preparation of this modified sugar of some representational instructions include but not limited to 4,981,957; 5,118,800; 5,319,080; 5,359,044; 5,393,878; 5,446,137; 5,466,786; 5,514,785; 5,519,134; 5,567,811; 5,576,427; 5,591,722; 5,597,909; 5,610,300; 5,627,053; 5,639,873; 5,646,265; 5,658,873; 5,670,633; 5,792,747; 5,700,920; 6,531,584; With 6,600,032; With WO 2005/121371.
In certain embodiments, BNA comprises the bicyclic nucleoside with following formula:
Figure A20078002541600351
Wherein:
Bx is a heterocyclic base moiety;
T1Be H or hydroxyl protecting group;
T2Be H, hydroxyl protecting group or reactive phosphorus group;
Z is C1-C6Alkyl, C2-C6Thiazolinyl, C2-C6Alkynyl, substituted C1-C6Alkyl, substituted C2-C6Thiazolinyl, substituted C2-C6Alkynyl, acyl group, substituted acyl group or substituted amide.
In one embodiment, the independent quilt of each described substituent group independently is selected from the single replacement of following optional protected substituent group or polysubstituted: halogen, oxo base, hydroxyl, OJ1, NJ1J2, SJ1, N3, OC (=X) J1, OC (=X) NJ1J2, NJ3C (=X) NJ1J2And CN, wherein each J1, J2And J3Independent is H or C1-C6Alkyl, X are O, S or NJ1
In some this embodiment, the independent quilt of each described substituent group independently is selected from the single replacement of following substituent group or polysubstituted: halogen, oxo base, hydroxyl, OJ1, NJ1J2, SJ1, N3, OC (=X) J1And NJ3C (=X) NJ1J2, each J wherein1, J2And J3Independent is H, C1-C6Alkyl or substituted C1-C6Alkyl, X are O or NJ1
In certain embodiments, the Z group is by one or more XxThe C that replaces1-C6Alkyl, wherein each XxIndependent is OJ1, NJ1J2, SJ1, N3, OC (=X) J1, OC (=X) NJ1J2, NJ3C (=X) NJ1J2Or CN; Each J wherein1, J2And J3Independent is H or C1-C6Alkyl, X are O, S or NJ1In another embodiment, the Z group is by one or more XxThe C that replaces1-C6Alkyl, wherein each XxIndependent is halogen (for example fluorine), hydroxyl, alkoxyl (CH for example3O-), substituted alkoxyl or azido.
In certain embodiments, the Z group is-CH2Xx, X whereinxBe OJ1, NJ1J2, SJ1, N3, OC (=X) J1, OC (=X) NJ1J2, NJ3C (=X) NJ1J2Or CN; Each J wherein1, J2And J3Independent is H or C1-C6Alkyl, X are O, S or NJ1In another embodiment, the Z group is-CH2Xx, X whereinxBe halogen (for example fluorine), hydroxyl, alkoxyl (CH for example3O-) or azido.
In some this embodiment, the Z group is (R)-configuration:
In some this embodiment, the Z group is (S)-configuration:
Figure A20078002541600362
In certain embodiments, each T1And T2Be hydroxyl protecting group.The preferred list of hydroxyl protecting group comprises benzyl, benzoyl, 2,6-dichloro benzyl, t-butyldimethylsilyl, t-butyldiphenylsilyl, methanesulfonate, tosylate, dimethoxytrityl (DMT), 9-phenyl yanthine-9-base (Pixyl) and 9-(right-methoxyphenyl) xanthine-9-base (MOX).In certain embodiments, T1For being selected from the hydroxyl protecting group of acetyl group, benzyl, t-butyldimethylsilyl, t-butyldiphenylsilyl and dimethoxytrityl, wherein preferred hydroxyl protecting group is T1Be 4,4 '-dimethoxytrityl.
In certain embodiments, T2Be the reactive phosphorus group, wherein preferred reactive phosphorus group comprises diisopropyl hydroxyl-oxethyl phosphoramidite and H-phosphate radical.In certain embodiments, T1Be 4,4 '-dimethoxytrityl, T2Be diisopropyl hydroxyl-oxethyl phosphoramidite.
In certain embodiments, oligomeric compounds has the monomer of at least one following formula:
Figure A20078002541600371
Or the monomer of following formula:
Or the monomer of following formula:
Figure A20078002541600373
Wherein
Bx is a heterocyclic base moiety;
T3Be linking group, nucleotide, oligonucleoside, oligonucleotide, single poly-subunit or oligomeric compounds between H, hydroxyl protecting group, the connection conjugated group that is connected with nucleoside or nucleoside;
T4Be linking group, nucleotide, oligonucleoside, the poly-subunit of oligonucleotide list or oligomeric compounds between H, hydroxyl protecting group, the connection conjugated group that is connected with nucleoside or nucleoside;
T wherein3And T4In linking group, nucleotide, oligonucleoside, oligonucleotide, single poly-subunit or oligomeric compounds between at least one is with nucleoside is connected nucleoside; With
Z is C1-C6Alkyl, C2-C6Thiazolinyl, C2-C6Alkynyl, substituted C1-C6Alkyl, substituted C2-C6Thiazolinyl, substituted C2-C6Alkynyl, acyl group, substituted acyl group or substituted amide.
In one embodiment, the independent quilt of each described substituent group independently is selected from the single replacement of following optional protected substituent group or polysubstituted: halogen, oxo base, hydroxyl, OJ1, NJ1J2, SJ1, N3, OC (=X) J1, OC (=X) NJ1J2, NJ3C (=X) NJ1J2And CN, wherein each J1, J2And J3Independent is H or C1-C6Alkyl, X are O, S or NJ1
In one embodiment, the independent quilt of each described substituent group independently is selected from the single replacement of following substituent group or polysubstituted: halogen, oxo base, hydroxyl, OJ1, NJ1J2, SJ1, N3, OC (=X) J1And NJ3C (=X) NJ1J2, each J wherein1, J2And J3Independent is H or C1-C6Alkyl, X are O or NJ1
In some this embodiment, at least one Z is C1-C6Alkyl or substituted C1-C6Alkyl.In certain embodiments, each Z independently is C1-C6Alkyl or substituted C1-C6Alkyl.In certain embodiments, at least one Z is C1-C6Alkyl.In certain embodiments, each Z independently is C1-C6Alkyl.In certain embodiments, at least one Z is a methyl.In certain embodiments, each Z is a methyl.In certain embodiments, at least one Z is an ethyl.In certain embodiments, each Z is an ethyl.In certain embodiments, at least one Z is substituted C1-C6Alkyl.In certain embodiments, each Z independently is substituted C1-C6Alkyl.In certain embodiments, at least one Z is substituted methyl.In certain embodiments, each Z is substituted methyl.In certain embodiments, at least one Z is substituted ethyl.In certain embodiments, each Z is substituted ethyl.
In certain embodiments, at least one substituent group is C1-C6(for example at least one Z is by one or more C to alkoxyl1-C6The C that alkoxyl replaces1-C6Alkyl).In another embodiment, each substituent group independently is C1-C6(for example each Z independently is by one or more C to alkoxyl1-C6The C that alkoxyl replaces1-C6Alkyl).
In certain embodiments, at least one C1-C6Alkoxy substituent is CH3(for example at least one Z is CH to O-3OCH2-).In another embodiment, each C1-C6Alkoxy substituent is CH3(for example each Z is CH to O-3OCH2-).
In certain embodiments, at least one substituent group is the halogen (C of at least one Z for being replaced by one or more halogens for example1-C6Alkyl).In certain embodiments, independently (for example each Z independently is the C that replaced by one or more halogens to each substituent group for halogen1-C6Alkyl).In certain embodiments, at least one halogenic substituent is that (for example at least one Z is CH to fluorine2FCH2-, CHF2CH2-or CF3CH2-).In certain embodiments, each halogenic substituent is that (for example each Z independently is CH to fluorine2FCH2-, CHF2CH2-or CF3CH2-).
In certain embodiments, at least one substituent group is the hydroxyl (C of at least one Z for being replaced by one or more hydroxyls for example1-C6Alkyl).In certain embodiments, independently (for example each Z independently is the C that replaced by one or more hydroxyls to each substituent group for hydroxyl1-C6Alkyl).In certain embodiments, at least one Z is HOCH2-.In another embodiment, each Z is HOCH2-.
In certain embodiments, at least one Z is CH3-, CH3CH2-, CH2OCH3-, CH2F-or HOCH2-.In certain embodiments, each Z independently is CH3-, CH3CH2-, CH2OCH3-, CH2F-or HOCH2-.
In certain embodiments, at least one Z group is by one or more XxThe C that replaces1-C6Alkyl, wherein each XxIndependent is OJ1, NJ1J2, SJ1, N3, OC (=X) J1, OC (=X) NJ1J2, NJ3C (=X) NJ1J2Or CN; Each J wherein1, J2And J3Independent is H or C1-C6Alkyl, X are O, S or NJ1In another embodiment, at least one Z group is by one or more XxThe C that replaces1-C6Alkyl, wherein each XxIndependent is halogen (for example fluorine), hydroxyl, alkoxyl (CH for example3O-) or azido.
In certain embodiments, each Z group independently is by one or more XxThe C that replaces1-C6Alkyl, wherein each XxIndependent is OJ1, NJ1J2, SJ1, N3, OC (=X) J1, OC (=X) NJ1J2, NJ3C (=X) NJ1J2Or CN; Each J wherein1, J2And J3Independent is H or C1-C6Alkyl, X are O, S or NJ1In another embodiment, each Z group independently is by one or more XxThe C that replaces1-C6Alkyl, wherein each XxIndependent is halogen (for example fluorine), hydroxyl, alkoxyl (CH for example3O-) or azido.
In certain embodiments, at least one Z group is-CH2Xx, X whereinxBe OJ1, NJ1J2, SJ1, N3, OC (=X) J1, OC (=X) NJ1J2, NJ3C (=X) NJ1J2Or CN; Each J wherein1, J2And J3Independent is H or C1-C6Alkyl, X are O, S or NJ1In certain embodiments, at least one Z group is-CH2Xx, X whereinxBe halogen (for example fluorine), hydroxyl, alkoxyl (CH for example3O-) or azido.
In certain embodiments, each Z group independently is-CH2Xx, each X whereinxIndependent is OJ1, NJ1J2, SJ1, N3, OC (=X) J1, OC (=X) NJ1J2, NJ3C (=X) NJ1J2Or CN; Each J wherein1, J2And J3Independent is H or C1-C6Alkyl, X are O, S or NJ1In another embodiment, each Z group independently is-CH2Xx, each X whereinxIndependent is halogen (for example fluorine), hydroxyl, alkoxyl (CH for example3O-) or azido.
In certain embodiments, at least one Z is CH3-.In another embodiment, each Z is CH3-.
In certain embodiments, at least one monomeric Z group is (the R)-configuration shown in the following formula:
Figure A20078002541600401
Or (the R)-configuration shown in the following formula:
Figure A20078002541600402
Or (the R)-configuration shown in the following formula:
In certain embodiments, the monomeric Z group of each of described formula is (R)-configuration.
In certain embodiments, at least one monomeric Z group is (the S)-configuration shown in the following formula:
Figure A20078002541600404
Or (the S)-configuration shown in the following formula:
Figure A20078002541600411
Or (the S)-configuration shown in the following formula:
Figure A20078002541600412
In certain embodiments, the monomeric Z group of each of described formula is (S)-configuration.
In certain embodiments, T3Be H or hydroxyl protecting group.In certain embodiments, T4Be H or hydroxyl protecting group.In another embodiment, T3For with nucleoside that nucleoside, nucleotide or single poly-subunit are connected between connect gene.In certain embodiments, T4For with nucleoside that nucleoside, nucleotide or single poly-subunit are connected between linking group.In certain embodiments, T3For with nucleoside that oligonucleoside or oligonucleotide are connected between linking group.In certain embodiments, T4For with nucleoside that oligonucleoside or oligonucleotide are connected between linking group.In certain embodiments, T3For with nucleoside that oligomeric compounds is connected between linking group.In certain embodiments, T4For with nucleoside that oligomeric compounds is connected between linking group.In certain embodiments, T3And T4In at least one comprises linking group between the nucleoside that is selected from di-phosphate ester or thiophosphate.
In certain embodiments, oligomeric compounds has monomeric at least one zone of following formula of at least two adjacency:
Figure A20078002541600413
Or monomeric at least one zone of the following formula of at least two adjacency:
Figure A20078002541600421
Or monomeric at least one zone of the following formula of at least two adjacency:
Figure A20078002541600422
In certain embodiments, oligomeric compounds comprises monomeric at least two zones of following formula of at least two adjacency.In certain embodiments, oligomeric compounds comprise interband every (gapped) oligomeric compounds.In certain embodiments, oligomeric compounds comprises about 8 to about 14 at least one zones in abutting connection with β-D-2 '-desoxyribofuranose yl nucleosides.In certain embodiments, oligomeric compounds comprises about 9 to about 12 at least one zones in abutting connection with β-D-2 '-desoxyribofuranose yl nucleosides.
In certain embodiments, monomer comprises sugared analogies.In some this embodiment, replace connecting key combination between sugar or sugar-nucleoside with analogies, keep the nuclear base with selected target hybridization.The representative example of sugar analogies includes but not limited to cyclohexenyl group or morpholino.The representative example that connects the analogies of key combination between sugar-nucleoside includes but not limited to that not having chirality by no electric charge connects peptide nucleic acid(PNA) (PNA) and the morpholino group that key connects.In some cases, replace the nuclear base with analogies.Representational nuclear base analogies are well known in the art, include but not limited to three Huan phenoxazine analog and universal base (28:2911-14 is attached to herein by reference for Berger et al., Nuc Acid Res.2000).The method of synthetic sugared analogies, nucleoside analogies and nuclear base analogies is well known to a person skilled in the art.
3. Dan Julian key
Described herein is with monomer (including but not limited to modified and not modified nucleoside and nucleotide) thereby the linking group of the formation oligomeric compounds that links together.According to whether having phosphorus atoms, linking group mainly is divided into two classes.The representational phosphorous key that connects includes but not limited to di-phosphate ester (P=O), phosphotriester, methyl phosphonate, phosphoramidate and thiophosphate (P=S).Representational non-phosphorous linking group includes but not limited to methylene methyl-imino (CH2-N (CH3)-O-CH2-), the sulfur diester (O-C (O)-S-), thionocarbamate (O-C (O) (NH)-S-), siloxanes (O-Si (H) 2-O-) and N, N '-dimethylformamide dimethyl hydrazine (CH2-N (CH3)-N (CH3)-).Oligomeric compounds with non-phosphorus linking group is called oligonucleoside.Connect key than natural phosphodiester, modified company's key can be used to change the nuclease resistance of (normally improving) oligomeric compounds.In certain embodiments, the Lian Jianke with chiral atom is prepared into racemic mixture, is prepared into independent enantiomer.Representational chirality connects key and includes but not limited to that phosphonate ester and thiophosphate prepare phosphorous even key and the non-phosphorous method that connects key is well known to a person skilled in the art.
Oligomeric compounds described herein contains one or more asymmetric centers, therefore produce enantiomer, diastereomer and other stereoisomerism configurations, determine with the absolute stereo chemistry, for for example sugared anomer is (R) or (S), and perhaps waiting for for example aminoacid is (D) or (L).Antisense compounds provided herein comprises all this possible isomers and their racemic form and the pure form of optically-active.
4. oligomeric compounds
In certain embodiments, this paper provides such oligomeric compounds, and it has to can be used for forming and comprises the reactive phosphorus group that for example connects company's key of key between di-phosphate ester and thiophosphate nucleoside.The method of the precursor of preparation and/or purification oligomeric compounds does not constitute the restriction to compositions provided herein and method.Synthetic and purification comprises that the method for the oligomeric compounds of DNA, RNA, oligonucleotide, oligonucleoside and antisense compounds is well known to a person skilled in the art.
In general, oligomeric compounds comprises a plurality of poly-subunits of list that linked together by linking group.The limiting examples of oligomeric compounds comprises primer, probe, antisense compounds, antisense oligonucleotide, external guide sequence (EGS) oligonucleotide, replaces montage (alternatesplicer) and siRNA.Thus, these chemical compounds can be introduced with the form of strand, two strands, annular, branch or hair clip, and can contain the structural detail such as inside or terminal process (bulge) or ring (loop).The oligomerization double chain compound can be that two chains that hybridization forms double chain compound take place, or has that enough self is complementary so that hybridization takes place and form the single chain of double chain compound wholly or in part.
In certain embodiments, the invention provides chimeric oligomeric compounds.In some this embodiment, chimeric oligomeric compounds is a chimeric oligonucleotide.In some this embodiment, chimeric oligonucleotide comprises the nucleotide through different modifying.In certain embodiments, chimeric oligonucleotide is the mixed matrix antisense oligonucleotide.
In general, chimeric oligomeric compounds can have so modified nucleoside, and they can be in position separately, perhaps can determine that clustering together in the zone of specific die body in meeting.Any combination of modifying and/or simulating group can constitute chimeric oligomeric compounds as herein described.
In certain embodiments, chimeric oligomeric compounds comprises at least one modified zone usually, and this modification can cause to the increase of the raising of the resistance of nuclease degradation, cellular uptake and/or to the raising of the binding affinity of target nucleic acids.In certain embodiments, the substrate of the enzyme that can cut RNA:DNA or RNA:RNA crossbred can be served as in the other zone of oligomeric compounds.For instance, this cell endonuclease of RNA enzyme H can cut the RNA chain of RNA:DNA duplex.Therefore, the activation of RNA enzyme H can cause the cutting of RNA target, thereby greatly strengthens the efficient to the inhibition of gene expression.Therefore, when using chimera, than for example with the thiophosphate deoxy-oligonucleotide of identical target area hybridization, also often can obtain suitable result with short oligomeric compounds.The available gel electrophoresis of the cutting of RNA target carries out conventional sense, if necessary, detects with relevant nucleic acid hybridization technique well known in the art.
In certain embodiments, chimeric oligomeric compounds is gapmer.In certain embodiments, chimeric chemical compound is short antisense compounds.In certain embodiments, lacking antisense compounds is gapmer.In some this embodiment, the mixed matrix antisense oligomers has one type internucleotide linkage in one or two pterion, have dissimilar internucleotide linkages at spacer.In some this embodiment, the mixed matrix antisense oligonucleotide has di-phosphate ester in the pterion and connects key, has thiophosphate at spacer and connects key.At some wherein in the embodiment different of the internucleotide linkage in certain pterion, that the internucleotide linkage of this pterion and spacer bridge joint is identical with internucleotide linkage in the pterion with the internucleotide linkage in the spacer.At some wherein in the embodiment different of the internucleotide linkage in certain pterion, that the internucleotide linkage of this pterion and spacer bridge joint is identical with internucleotide linkage in the spacer with the internucleotide linkage in the spacer.
C. some lacks antisense compounds
Disclosed herein is length 8-16, preferred 9-15, more preferably 9-14, the more preferably short antisense compounds of 10-14 nucleotide.In certain embodiments, the length of lacking antisense compounds is 9-14 nucleotide.In certain embodiments, the length of lacking antisense compounds is 10-14 nucleotide.In certain embodiments, this short antisense compounds is short antisense oligonucleotide.
In certain embodiments, lack antisense compounds and comprise one or more chemical modifications.In some this embodiment, short antisense compounds comprises at least one modified nucleotide.In certain embodiments, lack antisense compounds and comprise two or more at least modified nucleotide.In certain embodiments, lack antisense compounds and comprise at least one modified internucleotide linkage.In certain embodiments, lacking antisense compounds is the mixed matrix oligonucleotide.In certain embodiments, lacking antisense compounds is chimeric oligonucleotide.In certain embodiments, lack antisense oligonucleotide through evenly modifying.In certain embodiments, lacking antisense oligonucleotide comprises and independently is chosen in each nuclear base and connects the modification of key at each.
In certain embodiments, lacking antisense compounds is short gapmer.In some this embodiment, short gamper comprises at least one high-affinity and modifies in one or more pterions of chemical compound.In certain embodiments, lack antisense compounds and in each pterion, comprise 1-3 high-affinity modification.In certain embodiments, the high-affinity of lacking antisense compounds is modified and to be made the target affinity be similar to and even greater than the target affinity of longer antisense compounds.In certain embodiments, the nucleotide of modifying through high-affinity is through sugar-modified nucleotide.This nucleotide that comprises abutment between those 4 ' and 2 ' positions that comprises through sugar-modified nucleotide at sugar.Sugar-modified BNA and other 2 '-modification as the 2 '-MOE of including but not limited to of exemplary high-affinity.In alternative embodiment of the present invention, it is not 2 '-O-(CH that high-affinity is modified2)nThe sugar-modified nucleotide of H (n=1-6).In other alternative embodiment, the nucleotide of modifying through high-affinity is not 2 '-OCH3Or 2 '-OCH2CH2OCH3Nucleotide.In certain embodiments, the nucleotide of modifying through high-affinity is given the Δ T of at least 1, at least 1.5, at least 2, at least 2.5, at least 3.0, at least 3.5 or at least 4.0 degree/nucleotidemSome high-affinity nucleotide modifications can increase toxicity known in the art.As shown here, short antisense compounds with high-affinity modification of finite population (2-6 usually) demonstrates few the increasing even of toxicity to be increased, but keeping or improved affinity target RNA, also reduce significantly simultaneously the expression of RNA target.Short antisense compounds of the present invention can be chosen wantonly and comprise conjugated group, for example cholesterol or C16
1. some pterion
In certain embodiments, lack antisense compounds and comprise 5 ' pterion and/or 3 ' pterion.In this embodiment, the feature in the feature in 3 ' pterion and 5 ' pterion is independent the selection.Therefore, in this embodiment, the monomer number (length) in the monomer number in the 5 ' pterion and the 3 ' pterion can be identical or can be different; Modification in the 5 ' pterion (if any) can be identical with the modification (if any) in the 3 ' pterion, and perhaps this modification (if any) can be different; Dan Julian key in Dan Julian key in the 5 ' pterion and the 3 ' pterion can be identical or can be different.
In certain embodiments, the pterion comprises one, two or three monomers (being that length is 1,2 or 3 monomer).In certain embodiments, the monomer in pterion is modified.In some this embodiment, the monomer in pterion is modified to improve the affinity of antisense compounds to its target nucleic acids.In certain embodiments, the monomer in pterion is nucleoside or nucleotide.In some this embodiment, the nucleoside in pterion or nucleotide comprise 2 ' and modify.In some this embodiment, the monomer in pterion (nucleoside or nucleotide) is BNA.In some this embodiment, the monomer in pterion is selected from α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA, β-D-methylene oxygen base (4 '-CH2-O-2 ') BNA, ethyleneoxy group (4 '-(CH2)2-O-2 ') BNA, amino oxygen base (4 '-CH2-O-N (R)-2 ') BNA and oxygen base amino (4 '-CH2-N (R)-O-2 ') BNA.In certain embodiments, the monomer in pterion comprises in 2 ' position and is selected from following substituent group: pi-allyl, amino, azido, thio group, O-pi-allyl, O-C1-C10Alkyl ,-OCF3, O-(CH2)2-O-CH3, 2 '-O (CH2)2SCH3, O-(CH2)2-O-N (Rm) (Rn) and O-CH2-C (=O)-N (Rm) (Rn), each R whereinmAnd RnIndependent is H or substituted or unsubstituted C1-C10Alkyl.In certain embodiments, the monomer in pterion is 2 ' MOE nucleotide.
In certain embodiments, the Dan Julian key in the pterion is natural internucleotide linkage.In certain embodiments, the Dan Julian key in the pterion is between the nucleotide of non-natural or connects key between nucleoside.In certain embodiments, the Dan Julian key in the pterion more can be resisted one or more nucleases than natural internucleotide linkage.In some this embodiment, the Dan Julian key in the pterion is that thiophosphate connects key (P=S).Wherein have in the embodiment of a Dan Julian key of surpassing in the pterion at some, each Dan Julian key is identical mutually.Wherein have in the embodiment of a Dan Julian key of surpassing in the pterion at some, each Dan Julian key is different mutually.
Those of ordinary skills will appreciate that, can with feature discussed above and modify with any be combined into to exercise be used for preparing the pterion.The limiting examples that following table provides has shown how to prepare the pterion by the Dan Julian key of selecting certain monomer number, list to gather in the middle of modification (if any) and the pterion.
LengthMonomer type/modificationDan Julian key in the middle of the pterion
1 2’MOEDo not have
1 BNADo not have
1Methylene oxygen base BNADo not have
1 ENADo not have
2 2’MOE P=S
2 BNA P=S
2Methylene oxygen base BNA P=S
2 ENA P=S
2 2’MOE P=O
2 BNA P=O
2Methylene oxygen base BNA P=O
2 ENA P=O
3 2’MOE P=S
3 BNA P=S
3Methylene oxygen base BNA P=S
3 ENA P=S
3 2’MOE P=O
3 BNA P=O
3Methylene oxygen base BNA P=O
3 ENA P=O
Wherein comprise in two, three or four the monomeric embodiments in the pterion at some, these two, three or four monomers all comprise identical modification (if any).Wherein comprise in two, three or four the monomeric embodiments in the pterion at some, in these two, three or four nuclear bases one or more different modifications of one or more and one or more all the other monomeric one or more modifications that comprise are arranged.
2. some is at interval
In certain embodiments, lacking antisense compounds comprises between 5 ' pterion and 3 ' pterion at interval.In certain embodiments, comprise 5,6,7,8,9,10,11,12,13 or 14 monomers at interval.In certain embodiments, Jian Ge monomer is not modified deoxyribonucleotide.In certain embodiments, Jian Ge monomer is not modified ribonucleotide.In certain embodiments, modify (if any) at interval and cause producing such antisense compounds, when in conjunction with its target nucleic acids, this chemical compound can be supported the cutting of RNA enzyme (including but not limited to RNA enzyme H).
In certain embodiments, the Dan Julian key in the interval is natural internucleotide linkage.In certain embodiments, the Dan Julian key in the interval is company's key of non-natural.In some this embodiment, the Dan Julian key in more can be resisted one or more nucleases than natural internucleotide linkage at interval.In some this embodiment, the Dan Julian key in is that thiophosphate connects key (P=S) at interval.In certain embodiments, each the Dan Julian key in the interval is all identical mutually.In certain embodiments, each the Dan Julian key in the interval is not identical all.
Those of ordinary skills will appreciate that, can with feature discussed above and modify with any be combined into to exercise be used for preparation at interval.The limiting examples that following table provides has shown how to prepare at interval by the Dan Julian key of selecting certain monomer number, list to gather in the middle of modification (if any) and the interval region.
LengthMonomer type/modificationDan Julian key at interval
5 DNA P=S
6 DNA P=S
7 DNA P=S
8 DNA P=S
9 DNA P=S
10 DNA P=S
11 DNA P=S
12 DNA P=S
13 DNA P=S
14 DNA P=S
6 DNA P=O
7 DNA P=O
8 DNA P=O
9 DNA P=O
10 DNA P=O
11 DNA P=O
12 DNA P=O
8 RNA P=S
9 RNA P=S
10 RNA P=S
11 RNA P=S
12 RNA P=S
Some interband every the antisense oligomeric compounds
Those of ordinary skills will appreciate that, can be selected pterion discussed above and interval, make up with multiple compound mode then, with produce interband every oligomeric compounds, include but not limited to interband every the antisense oligomeric compounds and interband every antisense oligonucleotide.The feature in 5 ' pterion and 3 ' pterion (length, modification, Lian Jian) can be selected independently of each other.Feature at interval comprises at least one and the relative modification difference of feature in 5 ' pterion and at least one and the relative modification difference in 3 ' pterion (being that at least one modification difference must be arranged between each adjacent area, so that these adjacent areas are distinguished mutually).Each feature at interval can be selected in addition independently.
In certain embodiments, the Dan Julian key in the middle of the pterion is identical with central at interval Dan Julian key.In certain embodiments, the Dan Julian key in the middle of the pterion is different with central at interval Dan Julian key.In some this embodiment, that the Dan Julian key of pterion and bridge joint at interval is identical with Dan Julian key in the pterion.In certain embodiments, with the pterion with at interval the Dan Julian key of bridge joint is identical with Dan Julian key in the interval.In certain embodiments, lack antisense compounds and have the same company's key from the beginning to the end.In some this embodiment, all keys all are thiophosphate (P=S) Lian Jian.
Those of ordinary skills will appreciate that, can with 3 ' pterion discussed above, 5 ' pterion, interval and connect key with any be combined into to exercise be used for preparing gapmer.The limiting examples that following table provides how to have shown by select a certain 5 ' pterion, at interval, 3 ' pterion and some will be at interval and company's key of each pterion bridge joint prepare gapmer.
Figure A20078002541600501
In certain embodiments, oligomeric compounds disclosed herein can comprise about 8 to about 16, preferred 9-15, more preferably 9-14, more preferably 10-14 monomer (promptly about 8 monomer) to about 16 connections.Those of ordinary skills will appreciate that this comprises the antisense compounds of 8,9,10,11,12,13,14,15 or 16 nuclear bases.In certain embodiments, oligomeric compounds is an antisense compounds.
In certain embodiments, the length of lacking antisense compounds is 8 nucleotide.
In certain embodiments, the length of lacking antisense compounds is 9 nucleotide.
In certain embodiments, the length of lacking antisense compounds is 10 nucleotide.
In certain embodiments, the length of lacking antisense compounds is 11 nucleotide.
In certain embodiments, the length of lacking antisense compounds is 12 nucleotide.
In certain embodiments, the length of lacking antisense compounds is 13 nucleotide.
In certain embodiments, the length of lacking antisense compounds is 14 nucleotide.
In certain embodiments, the length of lacking antisense compounds is 15 nucleotide.
In certain embodiments, the length of lacking antisense compounds is 16 nucleotide.
In certain embodiments, the length of lacking antisense compounds is 8 monomers.In certain embodiments, the length of lacking antisense compounds is 9 monomers.In certain embodiments, the length of lacking antisense compounds is 10 monomers.In certain embodiments, the length of lacking antisense compounds is 11 monomers.In certain embodiments, the length of lacking antisense compounds is 12 monomers.In certain embodiments, the length of lacking antisense compounds is 13 monomers.In certain embodiments, the length of lacking antisense compounds is 14 monomers.In certain embodiments, the length of lacking antisense compounds is 15 monomers.In certain embodiments, the length of lacking antisense compounds is 16 monomers.In certain embodiments, lack antisense compounds and comprise 9-15 monomer.In certain embodiments, lack antisense compounds and comprise 10-15 monomer.In certain embodiments, lack antisense compounds and comprise 12-14 monomer.In certain embodiments, lack antisense compounds and comprise 12-14 nucleotide or nucleoside.
Those skilled in the art have learnt that behind the illustrational short antisense compounds of this paper institute, it goes without doing, and too many experiment just can be determined more short antisense compounds.
In certain embodiments, lacking antisense compounds comprises its one or both sides and is connected to the interval that surpasses a pterion.Therefore, in certain embodiments, short antisense compounds comprises two or more 5 ' pterions and two or more 3 ' pterion.In certain embodiments, lack antisense compounds and comprise one 5 ' pterion and two or more 3 ' pterion.In certain embodiments, lack antisense compounds and comprise one 3 ' pterion and two or more 5 ' pterion.Some this embodiment comprises for example with lower area: the 1 ' pterion-abutment-the 25 ' pterion-abutment-at interval-and abutment-the 23 ' pterion-abutment-the 1 ' pterion.In this embodiment, each zone is adjacent the zone and compares and have at least one and modify difference.Therefore pterion and the 1,, in this embodiment, the 25 ' pterion and the 23 ' pterion with compare at interval with the 1 ' ' pterion compares, and independently comprises one or more modification differences separately.In this embodiment, the 1 ' modification and the 1 in pterion ' one of the modification in pterion or both can be identical or different with modification (if any) at interval.
4. some conjugated group
In one aspect, oligomeric compounds is to modify by the covalently bound of one or more conjugated groups.In general, conjugated group can be modified one or more characteristics of connected oligomeric compounds, includes but not limited to pharmacodynamics, pharmacodynamics, combination, absorption, cell distribution, cellular uptake, electric charge and removing.Conjugated group is directly or by optional coupling part or linking group to be connected with parent compound such as oligomeric compounds in the conventional use of chemical field.The preferred list of conjugated group includes but not limited to intercalator (intercalator), reporter molecule, polyamine, polyamide, Polyethylene Glycol, thioether, polyethers, cholesterol, sulfo-cholesterol, cholic acid part, folic acid, lipid, phospholipid, biotin, azophenlyene, phenanthridines, anthraquinone, diamantane (obsolete), acridine, fluorescein, rhodamine, coumarin and dyestuff.
Preferably be suitable for conjugated group of the present invention and comprise lipid part such as cholesterol moiety (Letsinger et al., Proc.Natl.Acad.Sci.USA, 1989,86,6553); Cholic acid (Manoharan et al., Bioorg.Med.Chem.Lett., 1994,4,1053); Thioether, for example hexyl-S-trityl mercaptan (Manoharan et al., Ann.N.Y.Acad.Sci., 1992,660,306; Manoharan et al., Bioorg.Med.Chem.Let., 1993,3,2765); Sulfo-cholesterol (Oberhauser et al., Nucl.Acids Res., 1992,20,533); Aliphatic chain, for example dodecanediol or or undecyl residue (Saison-Behmoaras et al., EMBO J., 1991,10,111; Kabanov et al., FEBSLett., 1990,259,327; Svinarchuk et al., Biochimie, 1993,75,49); Phospholipid, for example two-cetyl-rac-glycerol or triethyl ammonium-1,2-two-O-cetyl-rac-glycerol-3-H-phosphate ester (Manoharan et al., Tetrahedron Lett., 1995,36,3651; Sheaet al., Nucl.Acids Res., 1990,18,3777); Polyamine or polyglycol chain (Manoharan et al., Nucleosides ﹠amp; Nucleotides, 1995,14,969); Adamantane acetic acid (Manoharan et al., Tetrahedron Lett., 1995,36,3651); Palmityl part (Mishra et al., Biochim.Biophys.Acta, 1995,1264,229); Perhaps 18-amine. or hexyl amino-carbonyl-oxycholesterin part (Crooke et al., J.Pharmacol.Exp.Ther., 1996,277,923).
Linking group or difunctionality coupling part (for example well known in the art those) are suitable for chemical compound provided herein.Linking group can be used for chemical functional group, conjugated group, reporter group and other groups and parent compound for example are connected in the selectivity site in the oligomeric compounds.In general, the difunctionality coupling part comprises the hydrocarbyl portion with two functional groups.One of them functional group is through selecting with binding purpose parent molecule or chemical compound, and another is through selecting with in conjunction with any selected group basically, as chemical functional group or conjugated group.In some embodiments, joint (linker) comprises unitary chain structure of repetitive such as ethylene glycol or aminoacid or oligomer.Routine is used for the example of the functional group of difunctionality coupling part, includes but not limited to the nucleophile that is used for the electrophile of nucleophilic group reaction and is used for reacting with electrophilic group.In some embodiments, the difunctionality coupling part comprises amino, hydroxyl, carboxylic acid, mercaptan, unsaturated bond (for example two keys or triple bond) etc.Some limiting examples of difunctionality coupling part comprise 8-amino-3,6-two oxa-s sad (ADO), 4-(N-maleimide ylmethyl) cyclohexane extraction-1-formic acid succinimide ester (SMCC) and 6-aminocaprolc acid (AHEX or AHA).Other linking group includes but not limited to substituted C1-C10Alkyl, substituted or unsubstituted C2-C10Substituted or the unsubstituted C of thiazolinyl2-C10Alkynyl, wherein the non-limiting list of preferred substituted comprises hydroxyl, amino, alkoxyl, carboxyl, benzyl, phenyl, nitro, mercaptan, thio alkoxy, halogen, alkyl, aryl, thiazolinyl and alkynyl.
5. synthetic, purification and analysis
Modified and the not modified nucleoside and the oligomerization of nucleotide, can be according to program (the Protocols for Oligonucleotides and Analogs that in the document DNA is reported, Ed.Agrawal (1993), Humana Press) and/or to the program (Scaringe of RNA report, Methods (2001), 23,206-217.Gait et al., Applications of Chemicallysynthesized RNA in RNA:Protein Interactions, Ed.Smith (1998), 1-36.Gallo et al., Tetrahedron (2001), 57,5707-5713) carry out.
Oligomeric compounds provided herein can be prepared expediently and routinely by the known technology in the solid phase synthesis.Have several manufacturers to sell and carry out this synthetic equipment, for example comprise Applied Biosystems (Foster City, CA).In addition or or, can adopt this synthetic any other means of carrying out well known in the art.Use similar techniques to prepare oligonucleotide such as thiophosphate and alkyl derivative, this is well-known.The present invention is not subjected to the restriction of antisense compounds synthetic method.
The method of purification and analysis oligomeric compounds is well known to a person skilled in the art.Analytical method comprises capillary electrophoresis (CE) and electron spray-mass spectrum.This synthesizing with analytical method can carry out in porous plate.Method of the present invention is not subjected to the restriction of oligomer purification process.
D. antisense mechanism
Antisense mechanism (mechanism) is the mechanism that all that relates to the hybridization of certain chemical compound and target nucleic acids, wherein Za Jiao consequence or effect are that target degraded or target occupy, and are accompanied by to relate to for example to transcribe or the stopping of cell mechanism (the cellular machinery) of montage.
One type the antisense mechanism that relates to the target degraded comprises RNA enzyme H.RNA enzyme H is a kind of cell endonuclease that can cut the RNA chain of RNA:DNA duplex.Known in this field, the strand antisense compounds of " DNA sample " can cause the RNA enzyme H activity in the mammalian cell.Therefore the activation of RNA enzyme H causes the cutting of RNA target, thereby greatly strengthens the efficient of the oligonucleotide mediated inhibition to gene expression of DNA sample.
In certain embodiments, through the antisense compounds of chemical modification to the affinity of target RNA than non-modified DNA height.In some this embodiment, this higher affinity causes the raising of usefulness, the feasible this chemical compound that can give than low dosage, and the toxicity probability descends, and therapeutic index is improved and whole medical expense descends.
Present disclosure specification proves, to be incorporated in the antisense compounds through the high-affinity nucleotide and the nucleoside of chemical modification, can make and to design length 8-16 the short antisense compounds of examining base, target RNA and/or target proteins matter that this weak point antisense compounds can be used for reducing cell, tissue and animal (including but not limited to the people) with the usefulness and the improved therapeutic index of raising.Therefore, in certain embodiments, the present invention is to provide so short antisense compounds, it comprises the high-affinity nucleotide modification that can be used for reducing target RNA in the body.Some this short antisense compounds also can be effective under than the lower dosage of the antisense compounds of describing before, and this makes and can reduce toxicity and treatment cost.In addition, some short antisense compounds has bigger oral administration probability.
Be to satisfy the demand to more potent antisense compounds, this paper provides the short antisense compounds comparing activity in vivo with longer chemical compound and improve (length 8-16, preferably 9-15, more preferably 9-14, more preferably 10-14 nucleotide).Some short antisense compounds is the gapmer chemical compound that comprises in 3 ' and 5 ' terminal (pterion) of chemical compound through the nucleotide of high-affinity chemical modification.In certain embodiments, although the adding of the nucleotide of modifying through high-affinity can make that antisense compounds length is shorter, target RNA in its predetermined body there are activity and specificity.What this paper imagined is so short antisense compounds, and wherein each pterion independently comprises 1-3 the nucleotide of modifying through high-affinity.In certain embodiments, this high-affinity modification is sugar-modified.The nucleotide of modifying through high-affinity includes but not limited to BNA and other nucleotide through 2 '-modification, as 2 '-MOE nucleotide.Also imagination is the short antisense compounds with at least one modified internucleotide linkage (for example thiophosphate internucleotide linkage).In certain embodiments, short antisense compounds of the present invention can have between all thiophosphate nucleoside and connects key.The optional conjugated group that comprises of short antisense compounds.As shown here, short antisense compounds is stronger to the affinity of DNA than them to the affinity of target RNA, and shows that by the minimizing of target mRNA and the minimizing of multiple disease indication they are more potent significantly in vivo.
This paper uses this point, promptly participate in to regulate glucose metabolism or removing, lipid metabolism, cholesterol but thanks or the RNA of insulin metabolism, is the RNA in any biological approach that participates in these processes of adjusting.This RNA is well known in the art.The example of target gene includes but not limited to that ApoB-100 (also claims APOB; Ag (x) antigen; ApoB-48; Apolipoprotein B; Apolipoprotein B-100; Apo B-48) and GCGR (also claim glucagon receptor; GR), CRP, DGAT2, GCCR, PCSK9, PTEN, PTP1B, SGLT2 and SOD1.
1. the adjusting of target expression
In certain embodiments, identify target and design the antisense oligonucleotide that to regulate this target or its expression.In certain embodiments, the oligomeric compounds of design targeting target nucleic acids molecule, this may be a rapid process of multistep.Usually, the target proteins matter of this process from identifying that its activity is to be regulated identifies that then its expression can produce the nucleic acid of this target proteins matter.In certain embodiments, the design of antisense compounds cause obtaining can with by the antisense compounds of the making nucleic acid molecular hybridization of targeting.In certain embodiments, this antisense compounds is antisense oligonucleotide or antisense oligonucleoside.In certain embodiments, antisense compounds and target nucleic acids are complementary mutually.In some this embodiment, antisense compounds and target nucleic acids are perfect complementary.In certain embodiments, antisense compounds comprises a mispairing.In certain embodiments, antisense compounds comprises two mispairing.In certain embodiments, antisense compounds comprises three or more mispairing.
The adjusting of the expression of target nucleic acids can realize by the nucleic acid function that changes any number.In certain embodiments, the function of RNA to be regulated includes but not limited to easy bit function, and the transposition function includes but not limited to that RNA translocates to the position of protein translation, RNA and translocates in the middle of the cell and carry out the position that the position of the synthetic and protein of RNA from the translation of this RNA is far apart.The RNA machining functions that can be regulated includes but not limited to that the montage (causing producing one or more RNA kinds (RNA species)) of this RNA, the 3 ' maturation that adds medicated cap, this RNA and the catalytic activity that relates to this RNA or complex of this RNA form (it can participate among (engaged in) this RNA or by this RNA and promote).The adjusting of expressing can cause the level of one or more nucleic acid species (nucleic acid species) to improve or the level of one or more nucleic acid species reduces, and described raising or reduction are interim or are in clean steady-state level (by netsteady state level).Therefore, in one embodiment, the adjusting of expression can mean the raising or the reduction of target RNA or protein level.In another embodiment, the adjusting of expression can mean the raising or the reduction of one or more RNA montage products, the perhaps variation of the ratio of two or more montage products.
In certain embodiments, the expression of target gene be with comprise about 8 to about 16, preferred 9-15, more preferably 9-14, more preferably the oligomeric compounds of 10-14 monomer (promptly about 8 monomer to about 16 connections) is regulated.Those of ordinary skills will appreciate that this comprises the method that the antisense compounds of one or more 8,9,10,11,12,13,14,15 or 16 nuclear of use bases is regulated the expression of target gene.
In certain embodiments, the method for adjusting target gene comprises that using length is the short antisense compounds of 8 nuclear bases.In certain embodiments, the method for adjusting target gene comprises that using length is the short antisense compounds of 9 nuclear bases.In certain embodiments, the method for adjusting target gene comprises that using length is the short antisense compounds of 8 nuclear bases.In certain embodiments, the method for adjusting target gene comprises that using length is the short antisense compounds of 10 nuclear bases.In certain embodiments, the method for adjusting target gene comprises that using length is the short antisense compounds of 10 nuclear bases.In certain embodiments, the method for adjusting target gene comprises that using length is the short antisense compounds of 11 nuclear bases.In certain embodiments, the method for adjusting target gene comprises that using length is the short antisense compounds of 12 nuclear bases.In certain embodiments, the method for adjusting target gene comprises that using length is the short antisense compounds of 13 nuclear bases.In certain embodiments, the method for adjusting target gene comprises that using length is the short antisense compounds of 14 nuclear bases.In certain embodiments, the method for adjusting target gene comprises that using length is the short antisense compounds of 15 nuclear bases.In certain embodiments, the method for adjusting target gene comprises that using length is the short antisense compounds of 16 nuclear bases.
In certain embodiments, the method for the expression of adjusting target gene comprises that use comprises 9-15 monomeric short antisense compounds.In certain embodiments, the method for the expression of adjusting target gene comprises that use comprises 10-15 monomeric short antisense compounds.In certain embodiments, the method for the expression of adjusting target gene comprises that use comprises 12-14 monomeric short antisense compounds.In certain embodiments, the method for the expression of adjusting target gene comprises that use comprises the short antisense compounds of 12 or 14 nucleotide or nucleoside.
2. hybridization
In certain embodiments, antisense compounds as enough complementary degree when avoiding under the bonded condition of needs specificity antisense compounds and non-target nucleic acids sequence generation non-specific binding, then it is with regard to the energy specific hybrid, described condition measure in vivo or medical treatment treatment situation under be physiological condition, be the condition of carrying out this mensuration in the situation of external test.
" stringent hybridization condition " used herein or " stringent condition " refer to that antisense compounds can hybridize with its target sequence but the condition few with the hybridization of other sequences.Stringent condition is sequence-dependent, can be different in different situations." stringent condition " of the hybridization of antisense compounds and target nucleic acids is by the characteristic of antisense compounds and forms and reach the algoscopy of studying them according to this and determine.
3. complementary
This area recognizes that mixing that the nucleotide affinity is modified can make than not modified chemical compound the more mispairing of more number is arranged.Similarly, comparable other oligonucleotide sequences of some few nucleotide sequence more can be tolerated mispairing.Those of ordinary skills can be for example by measuring melting temperature (Tm), determine the suitable mispairing number between each oligonucleotide or between certain oligonucleotide and the target nucleic acids.TmOr Δ TmCan go out by the technique computes that those of ordinary skills know.For example, and Freier etc. (Nucleic Acids Research, 1997,25,22:4429-4443) technology of Miao Shuing can allow those skilled in the art assess the ability of nucleotide modification aspect the melting temperature that improves the RNA:DNA duplex.
4. homogeneity
Antisense compounds or its part can have definite (defined) homogeneity percentage rate with certain SEQ ID NO or the chemical compound with specific Isis number.As used herein, promptly certain sequence is when it and sequence disclosed herein have identical nuclear base pairing ability, and then the sequence of it and the disclosure has homogeneity.For example, wherein contain uracil and can be considered to homogeneity, because uracil and thymidine can both match with adenine with the RNA of the thymidine (thymidine) in the open sequence that replaces chemical compound described herein.This homogeneity can be on the whole length of oligomeric compounds, perhaps in the part of antisense compounds (for example, nuclear base 1-20 and certain 20-mer of certain 27-mer can be compared, to determine the homogeneity percentage rate of this oligomeric compounds and this SEQ ID NO).Those skilled in the art recognize that certain antisense compounds does not need to have with the same sequence of those chemical compounds described herein and just can play and the similar function of antisense compounds described herein.The present invention also provides the shortening version (version) of antisense compounds teaching herein, the nonidentity version of antisense compounds perhaps teaching herein.The nonidentity version is that wherein each base does not have active those antisense compounds of the pairing identical with antisense compounds disclosed herein.Each base is because shorter or have at least one abasic site (abasic site) and do not have identical pairing activity.Perhaps, the nonidentity version can comprise that at least one is had the base (for example G can be replaced by C, A or T) that the active different bases of different pairings have replaced.The homogeneity percentage rate is to calculate according to the base number that has with the same base pairing corresponding to the SEQ ID NO that is compared or antisense compounds.The nonidentity base can be adjacent each other, perhaps can be distributed in oligonucleotide everywhere, and perhaps both of these case has.
For example, have certain 16-mer of the sequence identical, 80% homogeneity is arranged with this 20-mer with the nuclear base 2-17 of certain 20-mer.Perhaps, contain four nuclear bases with different certain 20-mer of this 20-mer, also 80% homogeneity is arranged with this 20-mer.Have certain 14-mer of the sequence identical, 78% homogeneity is arranged with this 18-mer with the nuclear base 1-14 of certain 18-mer.This calculating is fully in those skilled in the art's limit of power.
The homogeneity percentage rate is based on there is ratio in nuclear base in the original series in modified sequence percent.Therefore, the 30 nuclear base antisense compounds of sufficient sequence that comprise the complementary series (complement) of the 20 nuclear active target sections of base (target segment), can have the part that 100% homogeneity is arranged with the complementary series of the active target section of this 20 nuclear base, also comprise 10 other nuclear base portions simultaneously.In the situation of this description, the complementary series of active target section can constitute single part.In preferred embodiments, at least a portion of the complementary series of the active target section that provides of oligonucleotide provided herein and this paper has at least 80%, at least 85%, at least 90%, at least 95%, at least 96%, at least 97%, at least 98%, at least 99% or 100% homogeneity.
E. target nucleic acids, zone and section
In certain embodiments, can design short antisense compounds and come any target nucleic acids of targeting.In certain embodiments, the relevant clinically target of target nucleic acids coding.In this embodiment, can produce clinical benefit to the adjusting of target nucleic acids.Some target nucleic acids includes but not limited to the target nucleic acids that table 1 is listed.
In certain embodiments, target nucleic acids is the nucleic acid molecules of coding ApoB.The nucleic acid molecules of coding ApoB includes but not limited to SEQ ID NO:1 and SEQ ID NO:2.
In certain embodiments, target nucleic acids is the nucleic acid molecules of coding SGLT2.The nucleic acid molecules of coding SGLT2 includes but not limited to SEQ ID NO:3.
In certain embodiments, target nucleic acids is the nucleic acid molecules of coding PCSK9.The nucleic acid molecules of coding PCSK9 includes but not limited to SEQ ID NO:4.
In certain embodiments, target nucleic acids is the nucleic acid molecules of coding SOD1.The nucleic acid molecules of coding SOD1 includes but not limited to SEQ ID NO:5.
In certain embodiments, target nucleic acids is the nucleic acid molecules of coding CRP.The nucleic acid molecules of coding CRP includes but not limited to SEQ ID NO:3.
In certain embodiments, target nucleic acids is the nucleic acid molecules of coding GCCR.The nucleic acid molecules of coding GCCR includes but not limited to SEQ ID NO:7 and SEQ ID NO:8.
In certain embodiments, target nucleic acids is the nucleic acid molecules of coding GCGR.The nucleic acid molecules of coding GCGR includes but not limited to SEQ ID NO:9.
In certain embodiments, target nucleic acids is the nucleic acid molecules of encoding D GAT2.The nucleic acid molecules of encoding D GAT2 includes but not limited to SEQ ID NO:10.
In certain embodiments, target nucleic acids is the nucleic acid molecules of coding PTP1B.The nucleic acid molecules of coding PTP1B includes but not limited to SEQ ID NO:11 and SEQ ID NO:12.
In certain embodiments, target nucleic acids is the nucleic acid molecules of coding PTEN.The nucleic acid molecules of coding PTEN includes but not limited to SEQ ID NO:14 or SEQ ID NO:15.
Table 1: some target nucleic acids
Figure A20078002541600611
The targeting process generally includes at least one such target zone, section or site of determining that target nucleic acids is central, and this target zone, section or site can make the antisense interaction occur, and make to obtain required effect.
In certain embodiments, 5 '-least significant end nucleotide in target zone is 5 ' target site of short antisense compounds, and 3 '-least significant end nucleotide in target zone is 3 ' target site of this identical short antisense compounds.In certain embodiments, 5 '-least significant end nucleotide in target zone is 5 ' target site of short antisense compounds, and 3 '-least significant end nucleotide in target zone is 3 ' target site of different short antisense compounds.In certain embodiments, the target zone comprises apart from 5 ' target site or the interior nucleotide sequence of 10,15 or 20 the nucleotide scopes in 3 ' target site.
In certain embodiments, the target zone is the zone of determining (structurallydefined) on the structure of nucleic acid.For example, in some this embodiment, 3 ' UTR, 5 ' UTR, exon, intron, coding region, translation initiation district, translation termination district or other nucleic acid region of determining can be contained in the target zone.
On the target nucleic acids by having one or more active short antisense compounds to the determined position of its targeting, be called " active target section ".In certain embodiments, having one or more active short antisense compounds is target RNA to the target nucleic acids of its targeting.When active target section is when being determined by a plurality of short antisense compounds, these chemical compounds preferably are separated by on target sequence and are no more than about 10 nucleotide, more preferably on target sequence, be separated by and be no more than about 5 nucleotide, also more preferably these short antisense compounds are successive, and most preferably these short antisense compounds are eclipsed.The short antisense compounds of in the middle of the active target section each has great difference on active (for example being determined by suppressing percent).Active short antisense compounds is those the short antisense compounds that can regulate the expression of its target nucleic acids (including but not limited to target RNA).Active short antisense compounds can suppress the expression at least 10% of its target RNA, preferred 20%.In a preferred embodiment, at least about 50%, the short antisense compounds of preferred about 70% the active target section of targeting can regulate the expression at least 40% of its target RNA.Determining the required inhibition level of active short antisense compounds at one more in the embodiment preferred, is to determine according to the result in order to the screening gained of determining active target section.
Suitable target section be active short antisense compounds institute targeting the target zone at least about 8 nuclear base portions.The target section can comprise such DNA or RNA sequence, these sequences comprise 5 ' of a target section from each illustrative (illustrative) target section-terminal at least 8 continuous kernel bases (remaining nuclear base is so continuous one section sequence (consecutive stretch) of same DNA or RNA, this section sequence just in time the upstream of 5 ' of this target section-end begin and proceed to this DNA or RNA comprise about 8 examine bases to about 16 till).The target section is also represented by such DNA or RNA sequence, these sequences comprise 3 ' of a target section from each illustrative target section-terminal at least 8 continuous kernel bases (remaining nuclear base is so continuous one section sequence of same DNA or RNA, this section sequence just in time the downstream of 3 ' of this target section-end begin and proceed to this DNA or RNA comprise about 8 examine bases to about 16 till).Also will be appreciated that, antisense target section can be represented by such DNA or RNA sequence, these sequences comprise at least 8 continuous kernel bases from the interior section of the sequence of certain illustrative target section, and can extend to short antisense compounds along either direction or both direction and comprise about 8 till about 16 nuclear bases.Those skilled in the art rely on the illustrated target section of this paper, and it goes without doing, and too much experiment just can identify more target section.
In case identify one or more targets zone, section or site, just can select the short antisense compounds that target is had enough complementarity, can be enough fully and with enough specificitys the short antisense compounds of hybridization takes place, to produce required effect.
Also can be with the such zone in the short antisense compounds targeting target nuclear base sequence, this zone comprises any continuous kernel base of length 8-16 nuclear base on the target nucleic acids molecule.
Target section length 8-16 nuclear base, that comprise one section sequence (stretch) of at least 8 continuous kernel bases selecting in the middle of the illustrative target section is also thought to be suitable for carrying out targeting.Therefore, lacking antisense compounds also can contain 8-16 that this paper confirms as in the middle of those sections of beginning in certain specific 5 ' target site and examine base.Around these zones 50, preferred 25, more preferably any 8,9,10,11 in 16 the nuclear base scopes (perimeter) or the more preferably section of 12,13,14,15 or 16 continuous kernel bases, also think to be suitable for carrying out targeting.
In another embodiment, " the suitable target section " that this paper confirmed can be applied to screen the short antisense compounds of the other expression that can regulate target nucleic acids." regulator " is such chemical compound, and they can reduce or improve the expression of target nucleic acids, includes the complementary 8 nuclear base portions of at least one and target section.Screening technique comprises such step: make the target section of nucleic acid contact and select one or more energy reductions or improve the candidate modulator of the expression of target nucleic acids with one or more candidate modulator.Can regulate the expression of (for example reduce or improve) target nucleic acids in case prove these one or more candidate modulator, this regulator can be applicable to the further research of function do to target then, perhaps uses, diagnoses and use or the medicine for treatment agent as research according to the present invention.
For all short antisense compounds that this paper discusses, sequence, monomer, single poly-modification and Dan Julian key can independently be selected separately.In certain embodiments, lacking antisense compounds is to describe by die body (motif).In this embodiment, any die body can use with any sequence, no matter whether this sequence and/or die body be clearly open in this article.In certain embodiments, lack antisense compounds and comprise the modification that is unsuitable for describing (for example, the diverse location place in the middle of it comprises several different modifying and/or connects the short antisense compounds of key) by die body.Can be any sequence and mix this combination, no matter whether this sequence is open in this article.Originally the appended sequence table of presenting a paper provides some to be independent of the nucleotide sequence of chemical modification.Though this sequence table is confirmed as each sequence " RNA " or " DNA " as required, actually, these sequences can be modified with any combination of chemical modification and/or die body.
In certain embodiments, lack antisense compounds and comprise the monomer that at least one is modified through high-affinity.In certain embodiments, provide the targeting coding to include but not limited to the short antisense compounds of the nucleic acid molecules of following target: ApoB-100 (also claims APOB; Ag (x) antigen; ApoB-48; Apolipoprotein B; Apolipoprotein B-100; Apo B-48), GCGR (also claims glucagon receptor; GR), CRP, DGAT2, GCCR, PCSK9, PTEN, PTP1B, SGLT2 and SOD1.In some this embodiment, the nucleic acid molecules of this short antisense compounds targeting coding any of these target.
F. some target
In certain embodiments, short antisense compounds can be designed to regulate any target.In certain embodiments, target is relevant clinically.In this embodiment, can produce clinical benefit to the adjusting of target.Some target is preferentially expressed in kidney.Some target is preferentially expressed in liver.Some target is relevant with metabolic disease.Some target is relevant with cardiovascular disease.In certain embodiments, target is selected from ApoB, SGLT2, PCSK9, SOD1, CRP, GCCR, GCGR, DGAT2, PTP1B and PTEN.In certain embodiments, target is selected from ApoB, SGLT2, PCSK9, SOD1, CRP, GCCR, GCGR, DGAT2 and PTP1B.In certain embodiments, target is any albumen outside the SGLT2.
In certain embodiments, lack antisense compounds and demonstrate liver and kidney specific target RNA reduction effect in the body.This specific character makes these short antisense compounds be specially adapted to suppress many target RNA that relate to metabolic disease and cardiovascular disease.Therefore, this paper provides the short antisense compounds by making described kidney or liver organization and the targeting RNA relevant with described disease to contact, and treats the method for cardiovascular disease or metabolic disease.Therefore, also provide the method for improving any indication in multiple metabolic disease or the cardiovascular disease indication with short antisense compounds of the present invention.
1.ApoB
ApoB (also claims Apolipoprotein B-100; ApoB-100; Apo B-48; ApoB-48 and Ag (x) antigen) be a kind of big glycoprotein, play indispensable effect in the assembling of lipid and secretion and in the transhipment and the receptor-mediated picked-up of different classes of lipoprotein with in sending.ApoB can carry out multiple activity, from the absorption and the processing of meals lipid, to the adjusting of circulation lipoprotein levels (Davidson and Shelness, Annu.Rev.Nutr., 2000,20,169-193).This back one behavioral illustrations it is why relevant with the atherosclerosis susceptibility, the concentration height correlation on every side of this susceptibility and the lipoprotein that contains ApoB (Davidson and Shelness, Annu.Rev.Nutr., 2000,20,169-193).ApoB-100 is the main protein component of LDL-C, and it contains this lipoprotein classification and the required domain of ldl receptor interaction.High-caliber LDL-C is the cardiovascular disease risk factor that comprises atherosclerosis.
Definition
" ApoB " is a kind of gene outcome or protein, and its expression will be regulated by lacking antisense compounds.
" ApoB nucleic acid " means the nucleic acid of any coding ApoB.For example, in certain embodiments, ApoB nucleic acid include but not limited to the to encode DNA sequence of ApoB, the RNA sequence of transcribing from the DNA of coding ApoB and the mRNA sequence of coding ApoB.
" ApoB mRNA " means the mRNA of coding ApoB.
ApoB treats indication
In certain embodiments, the invention provides the method for the expression of regulating the ApoB in the individuality, described method comprises the short antisense compounds that gives targeting ApoB nucleic acid.In certain embodiments, the invention provides the individual method of treatment, described method comprises and gives the pharmaceutical composition that one or more comprise the short antisense compounds of targeting ApoB nucleic acid.In certain embodiments, individuality suffers from hypercholesterolemia, non-familial hypercholesterolemia, familial hypercholesterolemia, the heterozygous familial hypercholesterolemia, familial hypercholesterolemia isozygotys, the Combination dyslipidemia, atherosclerosis, develop atherosclerotic risk, coronary heart disease, the coronary disease medical history, the coronary heart disease of early showing effect, one or more coronary heart disease risk factors, type ii diabetes, type ii diabetes companion dyslipidemia, dyslipidemia, hypertriglyceridemia, hyperlipemia, the high fatty acid mass formed by blood stasis, fatty degeneration of liver, non-alcoholic stellato-hepatitis or non-alcohol fatty liver.
The guilding principle that lipid reduces therapy by u.s. national cholesterol education program (NCEP) adult treatment expert scheme III (ATPIII) in calendar year 2001 set up and upgraded in 2004 (Grundyet al., Circulation, 2004,110,227-239).This guilding principle comprises acquisition complete lipoprotein general picture (profile) after fasting in 9-12 hour usually, to determine LDL-C, T-CHOL and HDL-C level.According to the guilding principle of up-to-date formulation, 130-159mg/dL, 160-189mg/dL and think critical height, height and high level respectively more than or equal to the LDL-C level of 190mg/dL.200-239mg/dL and think critical height and high level respectively more than or equal to the total cholesterol level of 240mg/dL.HDL-C level less than 40mg/dL is thought low-level.
In certain embodiments, this individuality has been confirmed as carrying out lipid reduction therapy.In some this embodiment, according to upgrading (Grundyet al. in calendar year 2001 foundation and in 2004 by u.s. national cholesterol education program (NCEP) adult treatment expert scheme III (ATPIII), Circulation, 2004,110, guilding principle 227-239), this individuality have been confirmed as carrying out lipid and have reduced therapy.In certain embodiments, need carry out its LDL-C of this individuality that lipid reduces therapy and be higher than 190mg/dL.In certain embodiments, need carry out its LDL-C of this individuality that lipid reduces therapy and be higher than 160mg/dL.In some this embodiment, its LDL-C of this individuality that need carry out lipid reduction therapy is higher than 130mg/dL.In some this embodiment, its LDL-C of this individuality that need carry out lipid reduction therapy is higher than 100mg/dL.In some this embodiment, this individuality that need carry out lipid reduction therapy should keep LDL-C to be lower than 160mg/dL.In some this embodiment, this individuality that need carry out lipid reduction therapy should keep LDL-C to be lower than 130mg/dL.In some this embodiment, this individuality that need carry out lipid reduction therapy should keep LDL-C to be lower than 100mg/dL.In some this embodiment, this individuality should keep LDL-C to be lower than 70mg/dL.
In certain embodiments, the invention provides the method that reduces the ApoB in the individuality.In certain embodiments, the invention provides the method that contains the ApoB lipoprotein that reduces in the individuality.In certain embodiments, the invention provides the method that reduces the LDL-C in the individuality.In certain embodiments, the invention provides the method that reduces the VLDL-C in the individuality.In certain embodiments, the invention provides the method that reduces the IDL-C in the individuality.In certain embodiments, the invention provides the method that reduces the non-IDL-C in the individuality.In certain embodiments, the invention provides the method that reduces the Lp (a) in the individuality.In certain embodiments, the invention provides the method that reduces the serum triglycerides in the individuality.In certain embodiments, the invention provides the method that reduces the liver tg in the individuality.In certain embodiments, the invention provides the method that reduces the Ox-LDL-C in the individuality.In certain embodiments, the invention provides the particulate method of little LDL that reduces in the individuality.In certain embodiments, the invention provides the particulate method of little VLDL that reduces in the individuality.In certain embodiments, the invention provides the method that reduces the phospholipid in the individuality.In certain embodiments, the invention provides the method that reduces the oxidized phospholipids in the individuality.
In certain embodiments, the invention provides the method that reduces the Ox-LDL-C concentration among the experimenter.In some this embodiment, the reduction of ApoB, LDL-C, VLDL-C, IDL-C, T-CHOL, non-HDL-C, Lp (a), triglyceride or Ox-LDL-C independently is selected from least 10%, at least 15%, at least 20%, at least 25%, at least 30%, at least 35%, at least 40%, at least 45%, at least 50%, at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95% and at least 100%.In some this embodiment, the reduction of ApoB, LDL-C, VLDL-C, IDL-C, T-CHOL, non-HDL-C, Lp (a), triglyceride or Ox-LDL-C independently is selected from least 20%, at least 30%, at least 40%, at least 50%, at least 60% and at least 70%.In some this embodiment, the reduction of ApoB, LDL-C, VLDL-C, IDL-C, T-CHOL, non-HDL-C, Lp (a), triglyceride or Ox-LDL-C independently is selected from least 40%, at least 50%, at least 60% and at least 70%.
In certain embodiments, the invention provides the method that improves the HDL-C concentration among the experimenter.
In certain embodiments, method provided by the invention does not reduce HDL-C.In certain embodiments, method provided by the invention does not cause the accumulation of lipid in liver.In certain embodiments, method provided by the invention does not cause fatty degeneration of liver.
In certain embodiments, can reduce again and the method for the treatment of relevant side effect when the invention provides ApoB concentration in reducing the experimenter.In some this embodiment, side effect is a liver toxicity.In some this embodiment, side effect is an abnormal liver function.In some this embodiment, side effect is that alanine aminotransferase (ALT) raises.In some this embodiment, side effect is that aspartate aminotransferase (AST) raises.
In certain embodiments, the invention provides the method that reduces the ApoB concentration among the experimenter not have to reach target LDL-C level because of lipid reduction therapy.In some this embodiment, the short antisense compounds of targeting ApoB nucleic acid is that the unique lipid that gives the experimenter reduces medicament.In some this embodiment, experimenter's lipid that acceptance (complywith) recommended of not following the doctor's advice as yet reduces therapy.In some this embodiment, Pharmaceutical composition of the present invention reduces therapy with in addition different lipid and gives altogether together.In some this embodiment, it is the LDL-Apheresis that other lipid reduces therapy.In some this embodiment, it is inhibin that other lipid reduces therapy.In some this embodiment, it is according to Ezetimibe that other lipid reduces therapy.
In certain embodiments, the invention provides the method for the ApoB concentration among the experimenter that reduction do not tolerate inhibin.In some this embodiment, because given inhibin, experimenter's creatine kinase concentration improves.In some this embodiment, because given inhibin, experimenter's abnormal liver function.In some this embodiment, because given inhibin, experimenter's myalgia.In some this embodiment, because given inhibin, the side effect of experimenter's center of origin nervous system.In certain embodiments, experimenter's inhibin of accepting to be recommended of not following the doctor's advice as yet gives.
In certain embodiments, the invention provides the method that reduces the liver tg among the experimenter.In some this embodiment, experimenter's liver tg raises.In some this embodiment, the experimenter suffers from fat hepatitis.In some this embodiment, the experimenter suffers from steatosis.In some this embodiment, the liver tg level is to measure by nuclear magnetic resonance.
In certain embodiments, the invention provides the method that reduces the coronary heart disease risk among the experimenter.In certain embodiments, the invention provides the method for the atherosclerotic progress among the experimenter that slows down.In some this embodiment, the invention provides the method that stops the atherosclerotic progress among the experimenter.In some this embodiment, the invention provides the size of the atherosclerotic plaque that reduces among the experimenter and/or the method for popular (prevalence).In certain embodiments, the method that is provided can reduce the experimenter and develop atherosclerotic risk.
In certain embodiments, the method that is provided can be improved the cardiovascular consequence among the experimenter.In some this embodiment, the improvement of cardiovascular consequence is that the risk of development coronary heart disease reduces.In some this embodiment, the improvement of cardiovascular consequence is the reduction of the incidence rate of one or more main cardiovascular events, and described incident includes but not limited to death, myocardial infarction, infraction, apoplexy, cardiogenic shock, pulmonary edema, cardiac arrest and atrial arrhythmia again.In some this embodiment, the improvement of cardiovascular consequence is confirmed by the improvement of carotid intimal medial thickness.In some this embodiment, the improvement of carotid intimal medial thickness is the reduction of thickness.In some this embodiment, the improvement of carotid intimal medial thickness is preventing of media thickness increase.
In certain embodiments, the pharmaceutical composition that comprises the short antisense compounds of targeting ApoB nucleic acid is for using in treatment.In certain embodiments, described treatment is the reduction of LDL-C, ApoB, VLDL-C, IDL-C, non-HDL-C, Lp (a), serum triglycerides, liver tg, Ox-LDL-C, little LDL granule, little VLDL, phospholipid or oxidized phospholipids in the individuality.In certain embodiments, described treatment is to following treatment of diseases: hypercholesterolemia, non-familial hypercholesterolemia, familial hypercholesterolemia, the heterozygous familial hypercholesterolemia, familial hypercholesterolemia isozygotys, the Combination dyslipidemia, atherosclerosis, develop atherosclerotic risk, coronary heart disease, the coronary disease medical history, the coronary heart disease of early showing effect, one or more coronary heart disease risk factors, type ii diabetes, type ii diabetes companion dyslipidemia, dyslipidemia, hypertriglyceridemia, hyperlipemia, the high fatty acid mass formed by blood stasis, fatty degeneration of liver, non-alcoholic stellato-hepatitis or non-alcohol fatty liver.In other embodiments, treatment is the reduction of CHD risk.In certain embodiments, treatment is atherosclerotic prevention.In certain embodiments, treatment is the prevention of coronary heart disease.
In certain embodiments, the pharmaceutical composition that will comprise the short antisense compounds of targeting ApoB nucleic acid is used for preparing the medicine in order to LDL-C, ApoB, VLDL-C, IDL-C, non-HDL-C, Lp (a), serum triglycerides, liver tg, Ox-LDL-C, little LDL granule, little VLDL, phospholipid or the oxidized phospholipids that reduces individuality.In certain embodiments, the pharmaceutical composition that will comprise the short antisense compounds of targeting ApoB nucleic acid is used to prepare in order to reduce the medicine of coronary heart disease risk.In certain embodiments, the short antisense compounds of targeting ApoB nucleic acid is used to prepare in order to treat the medicine of following disease: hypercholesterolemia, non-familial hypercholesterolemia, familial hypercholesterolemia, the heterozygous familial hypercholesterolemia, familial hypercholesterolemia isozygotys, the Combination dyslipidemia, atherosclerosis, develop atherosclerotic risk, coronary heart disease, the coronary disease medical history, the coronary heart disease of early showing effect, one or more coronary heart disease risk factors, type ii diabetes, type ii diabetes companion dyslipidemia, dyslipidemia, hypertriglyceridemia, hyperlipemia, the high fatty acid mass formed by blood stasis, fatty degeneration of liver, non-alcoholic stellato-hepatitis or non-alcohol fatty liver.
The ApoB combination treatment
In certain embodiments, the pharmaceutical composition that one or more is comprised the short antisense compounds of targeting ApoB nucleic acid gives altogether with one or more other medicament.In certain embodiments, described one or more other medicament be designed to its disease for the treatment of or disease identical with described one or more pharmaceutical compositions of the present invention.In some this embodiment, described one or more medicaments are that lipid reduces medicament.In certain embodiments, described one or more other medicament be designed to its disease for the treatment of or disease different with described one or more pharmaceutical compositions of the present invention.In certain embodiments, described one or more other medicament is designed to treat the ill effect of one or more pharmaceutical compositions of the present invention.In certain embodiments, one or more pharmaceutical compositions of the present invention are given altogether with another medicament, to treat the ill effect of other these another medicaments.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is given simultaneously.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is given at different time.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is prepared together in single dosage form.In certain embodiments, with other separately preparation of medicament of one or more pharmaceutical compositions of the present invention and one or more.
In certain embodiments, the medicament that can give altogether with the pharmaceutical composition of the short antisense compounds that comprises targeting ApoB nucleic acid comprises that lipid reduces medicament.In some this embodiment, can include but not limited to atorvastatin, simvastatin, rosuvastatin with the medicament that pharmaceutical composition of the present invention gives altogether and according to Ezetimibe.In some this embodiment, lipid is reduced medicament before giving the present composition, give.In some this embodiment, lipid is reduced medicament after giving the present composition, give.In some this embodiment, lipid is reduced medicament when giving the present composition, give.In some this embodiment, the dosage that the lipid that gives altogether reduces medicament is identical with the dosage that gives separately to be given when lipid reduces medicament.In some this embodiment, the dosage that the lipid that gives altogether reduces medicament is lower than the dosage that is given when giving lipid reduction medicament separately.In some this embodiment, the dosage that the lipid that gives altogether reduces medicament is higher than the dosage that is given when giving lipid reduction medicament separately.
In certain embodiments, it is the HMG-CoA reductase inhibitor that the lipid that gives altogether reduces medicament.In some this embodiment, the HMG-CoA reductase inhibitor is an inhibin.In some this embodiment, inhibin is selected from atorvastatin, simvastatin, pravastatin, fluvastatin and rosuvastatin.
In certain embodiments, it is cholesterol absorption inhibitor that the lipid that gives altogether reduces medicament.In some this embodiment, cholesterol absorption inhibitor is according to Ezetimibe.
In certain embodiments, it is HMG-CoA reductase inhibitor and cholesterol absorption inhibitor formulated together altogether that the lipid that gives altogether reduces medicament.In some this embodiment, it is according to Ezetimibe/simvastatin that lipid formulated together altogether reduces medicament.
In certain embodiments, it is microsomal triglyceride transfer protein inhibitor (MTP inhibitor) that the lipid that gives altogether reduces medicament.
In certain embodiments, the medicament that gives altogether is a bile acid chelating agent.In some this embodiment, bile acid chelating agent is selected from colestyramine, colestipol and colesevelam.
In certain embodiments, the medicament that gives altogether is a nicotinic acid.In some this embodiment, nicotinic acid is selected from rapid release nicotinic acid, extended release nicotinic acid and slow release nicotinic acid.
In certain embodiments, the medicament that gives altogether is Carboxymethylcellulose (fibric acid).In some this embodiment, Carboxymethylcellulose is selected from gemfibrozil, fenofibrate, chlorine Bei Te, bezafibrate and ciprofibrate.
More examples of the medicament that can give altogether with the pharmaceutical composition of the short antisense compounds that comprises targeting ApoB nucleic acid include but not limited to corticosteroid (including but not limited to prednisone); Immunoglobulin (includes but not limited to vein immunoglobulin (IVIg); Analgesic (for example acetaminophen); Antiinflammatory (including but not limited to NSAID (non-steroidal anti-inflammatory drug) (for example ibuprofen, COX-1 inhibitor and cox 2 inhibitor)); Salicylate; Antibiotic; Antiviral agent; Antifungal; Antidiabetic medicine (for example biguanide, glucosidase inhibitor, insulin, sulfonylureas and thiazolidinediones); The adrenergic modulation agent; Diuretic; Hormone (for example short anabolism steroid, androgen, estrogen, calcitonin, progesterone, somatostatin and thyroxin); Immunomodulator; Muscle relaxant; Hydryllin; Osteoporosis medicament (for example diphosphonate, calcitonin and estrogen); Prostaglandin; Antineoplastic agent; The spiritual healing medicament; Tranquilizer; Poison Oak Tree (oak) or black poison wood (sumac) product; Antibody and vaccine.
In certain embodiments, the pharmaceutical composition that comprises the short antisense compounds of targeting ApoB nucleic acid can be reduced therapy in conjunction with lipid gives.In some this embodiment, it is that curative life style changes that lipid reduces therapy.In some this embodiment, it is the LDL-Apheresis that lipid reduces therapy.
In one embodiment, antisense compounds provided herein can be used to reduce the level of the lipoprotein that contains apolipoprotein B among the people experimenter." lipoprotein that contains apolipoprotein B " used herein refers to any lipoprotein with apolipoprotein B as its protein component, it is believed that to comprise LDL, VLDL, IDL and lipoprotein.LDL, VLDL, IDL and lipoprotein contain the apolipoprotein B of a molecule separately, so serum apolipoprotein B measured value can reflect the total quantity of these lipoproteins.Known in this field, each above-mentioned lipoprotein can both cause atheroma.Therefore, one or more in the reduction serum contain the lipoprotein of apolipoprotein B, the treatment benefit are provided can for people experimenter.Little LDL granule it is believed that than big LDL granule more can cause atheroma, therefore reduces little LDL granule and the treatment benefit is provided can for people experimenter.Other lipid parameter also can determine in the experimenter.T-CHOL: HDL than or LDL: the reduction of HDL ratio is to want the improvement than the aspect of the cholesterol that obtains clinically.Also want to reduce the serum triglycerides of the philtrum that shows that lipid level raises equally, clinically.
Other indications of the cardiovascular disease that can measure in the experimenter comprise the serum LDL granular size; Serum LDL cholesteryl ester concentration; The serum LDL cholesteryl ester is formed; The degree of unsaturation of serum LDL cholesteryl ester; With the serum hdl cholesterol levels.The classification of " serum LDL granular size " used herein ester serum LDL granular size, this classification can comprise minimum, little, medium or bulky grain, represents with g/ μ mol usually.In situation of the present invention, " serum LDL cholesteryl ester concentration " means the quantity that the cholesterol that exists in the LDL granule refers to, measures with mg/dL usually.In situation of the present invention, " serum LDL cholesteryl ester composition " is the percentage measurements of exist in the serum LDL granule saturated, single unsaturated and how unsaturated cholesteryl ester fatty acid." many degrees of unsaturation of serum LDL cholesteryl ester " mean the percentage ratio of the how unsaturated cholesteryl ester fatty acid in the serum LDL granule.
Obtain serum or plasma sample for the method for analyzing with prepare blood serum sample so that the method for analysis is well known to a person skilled in the art.With regard to the measurement of lipoprotein, cholesterol, triglyceride and cholesteryl ester, term " serum " and " blood plasma " can be used in this article mutually.
In another embodiment, antisense compounds provided herein can be used to treat metabolic disease.There is multiple biomarker to can be used to assess metabolic disease.For example, blood glucose levels can be by doctor or even patient with the test kit that obtains usually or blood glucose meter (Ascensia ELITE for exampleTMKit, Ascensia (Bayer), Tarrytown NY or Accucheck, Roche Diagnostics) measure.Also can measure (glycated) hemoglobin (HbA of saccharifying1c).HbA1cBe a kind of stable less (minor) haemoglobin variant, the post translational modification of being undertaken by glucose forms in vivo, and it contains the NH of remarkable saccharifying2Terminal β chain.HbA1cBetween level and preceding 3 months average blood glucose level very strong dependency is arranged.Therefore, HbA1cOften be regarded as measuring the blood-glucose control of keeping " goldstandard " (Bunn, H.F.et al., 1978, Science.200,21-7).HbA1cCan measure by ion exchange HPLC or immunoassay; Be used for HbA1cThe family's blood collecting measured and mailing apparatus (kit) can obtain now everywhere.The serum fructosamine is that another that stablize glucose control measured, and can measure (Cobas Integra, Roche Diagnostics) by colorimetric method.
The short antisense compounds of some targeting ApoB nucleic acid
In certain embodiments, lacking the antisense compounds targeting has
Figure A20078002541600741
The ApoB nucleic acid of the sequence of searching number NM_000384.1 (being incorporated herein) with SEQ ID NO:1.In some this embodiment, short antisense compounds and the SEQ IDNO:1 of targeting SEQ ID NO:1 have at least 90% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:1 of targeting SEQ ID NO:1 have at least 95% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:1 of targeting SEQ ID NO:1 have 100% complementarity.In certain embodiments, the short antisense compounds of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from the nucleotide sequence that table 2 and table 3 provide.
The nucleotide sequence that each SEQ ID NO provides in the table 2 and 3 is independent of any modification to sugar moieties, Dan Julian key or nuclear base.Thus, the defined short antisense compounds of certain SEQ ID NO can comprise one or more to connecting the modification of key or nuclear base between sugar moieties, nucleoside independently.Isis number (Isis NO.) described antisense compounds represented the nuclear base sequence with one or more to connecting key between sugar moieties, nucleoside or examining the combination of the modification of base.
Table 2 and 3 has been enumerated the example of the short antisense compounds of targeting SEQ ID NO:1.Table 2 has been enumerated the short antisense compounds that 100% complementarity is arranged with SEQ ID NO:1.Table 3 has been enumerated the short antisense compounds that has one or two mispairing with respect to SEQ ID NO:1.The file that is marked with " gapmer die body " is represented the pterion of each short antisense compounds-at interval-pterion die body.Spacer segment comprises 2 '-deoxyribonucleotide, and each nucleotide of each pterion section comprises the sugar through 2 '-modification.The concrete sugar through 2 '-modification is also represented in " gapmer die body " file.For example, " 2-10-2 MOE " means 2-10-2 gapmer die body, and wherein the spacer segment flank of 10 2 '-deoxyribonucleotides is connected to the pterion section of 2 nucleotide, and wherein the nucleotide of pterion section is 2 '-MOE nucleotide.Connecting key between nucleoside is thiophosphate.Short antisense compounds comprises the 5-methylcytidine that substitutes not modified cytosine, unless show " not modified cytosine " in the gapmer die body file, represented in this case cytosine is not modified cytosine.For example, " 5-mC is only in the interval " expression spacer segment has the 5-methylcytidine, and the pterion section has not modified cytosine.
Table 2: the short antisense compounds of targeting SEQ ID NO:1
ISIS No5 ' target site3 ' target siteSequence (5 '-3 ')The Gapmer die body SEQ ID NO
372816 263 278 CCGGAGGTGCTTGAAT 3-10-3 MOE 16
372894 264 277 CGGAGGTGCTTGAA 2-10-2 MOE 17
372817 428 443 GAAGCCATACACCTCT 3-10-3 MOE 18
372895 429 442 AAGCCATACACCTC 2-10-2 MOE 19
372818 431 446 GTTGAAGCCATACACC 3-10-3 MOE 20
372896 432 445 TTGAAGCCATACAC 2-10-2 MOE 21
372819 438 453 CCTCAGGGTTGAAGCC 3-10-3 MOE 22
372897 439 452 CTCAGGGTTGAAGC 2-10-2 MOE 23
372820 443 458 TTTGCCCTCAGGGTTG 3-10-3 MOE 24
372898 444 457 TTGCCCTCAGGGTT 2-10-2 MOE 25
372821 468 483 AGTTCTTGGTTTTCTT 3-10-3 MOE 26
372899 469 482 GTTCTTGGTTTTCT 2-10-2 MOE 27
372822 587 602 CCTCTTGATGTTCAGG 3-10-3 MOE 28
372900 588 601 CTCTTGATGTTCAG 2-10-2 MOE 29
372823 592 607 ATGCCCCTCTTGATGT 3-10-3 MOE 30
372901 593 606 TGCCCCTCTTGATG 2-10-2 MOE 31
346583 715 728 TGCCACATTGCCCT 3-8-3 MOE 32
346584 716 729 TTGCCACATTGCCC 3-8-3 MOE 33
346585 717 730 GTTGCCACATTGCC 3-8-3 MOE 34
346586 718 731 TGTTGCCACATTGC 3-8-3 MOE 35
346587 719 732 CTGTTGCCACATTG 3-8-3 MOE 36
346588 720 733 TCTGTTGCCACATT 3-8-3 MOE 37
346589 721 734 TTCTGTTGCCACAT 3-8-3 MOE 38
346590 722 735 TTTCTGTTGCCACA 3-8-3 MOE 39
346591 723 736 ATTTCTGTTGCCAC 3-8-3 MOE 40
372824 929 944 GTAGGAGAAAGGCAGG 3-10-3 MOE 41
372902 930 943 TAGGAGAAAGGCAG 2-10-2 MOE 42
372825 1256 1271 GGCTTGTAAAGTGATG 3-10-3 MOE 43
372903 1257 1270 GCTTGTAAAGTGAT 2-10-2 MOE 44
372826 1304 1319 CCACTGGAGGATGTGA 3-10-3 MOE 45
372904 1305 1318 CACTGGAGGATGTG 2-10-2 MOE 46
372829 2135 2150 TTTCAGCATGCTTTCT 3-10-3 MOE 47
372907 2136 2149 TTCAGCATGCTTTC 2-10-2 MOE 48
372832 2774 2789 CATATTTGTCACAAAC 3-10-3 MOE 49
372910 2775 2788 ATATTTGTCACAAA 2-10-2 MOE 50
372833 2779 2794 ATGCCCATATTTGTCA 3-10-3 MOE 51
372911 2780 2793 TGCCCATATTTGTC 2-10-2 MOE 52
372835 2961 2976 TTTTGGTGGTAGAGAC 3-10-3 MOE 53
372913 2962 2975 TTTGGTGGTAGAGA 2-10-2 MOE 54
346592 3248 3261 TCTGCTTCGCACCT 3-8-3 MOE 55
346593 3249 3262 GTCTGCTTCGCACC 3-8-3 MOE 56
346594 3250 3263 AGTCTGCTTCGCAC 3-8-3 MOE 57
346595 3251 3264 CAGTCTGCTTCGCA 3-8-3 MOE 58
346596 3252 3265 TCAGTCTGCTTCGC 3-8-3 MOE 59
346597 3253 3266 CTCAGTCTGCTTCG 3-8-3 MOE 60
346598 3254 3267 CCTCAGTCTGCTTC 3-8-3 MOE 61
346599 3255 3268 GCCTCAGTCTGCTT 3-8-3 MOE 62
346600 3256 3269 AGCCTCAGTCTGCT 3-8-3 MOE 63
372836 3350 3365 AACTCTGAGGATTGTT 3-10-3 MOE 64
372914 3351 3364 ACTCTGAGGATTGT 2-10-2 MOE 65
372837 3355 3370 TCATTAACTCTGAGGA 3-10-3 MOE 66
372915 3356 3369 CATTAACTCTGAGG 2-10-2 MOE 67
372838 3360 3375 ATTCATCATTAACTCT 3-10-3 MOE 68
372916 3361 3374 TTCATCATTAACTC 2-10-2 MOE 69
372839 3409 3424 TTGTTCTGAATGTCCA 3-10-3 MOE 70
387461 3409 3424 TTGTTCTGAATGTCCACytosine in the 3-10-3 methylene oxygen base BNA interval is not modified 70
380147 3409 3424 TTGTTCTGAATGTCCA3-10-3 methylene oxygen base BNA 70
372917 3410 3423 TGTTCTGAATGTCC 2-10-2 MOE 73
372840 3573 3588 CAGATGAGTCCATTTG 3-10-3 MOE 74
372918 3574 3587 AGATGAGTCCATTT 2-10-2 MOE 75
372841 3701 3716 ATCCACAGGGAAATTG 3-10-3 MOE 76
372919 3702 3715 TCCACAGGGAAATT 2-10-2 MOE 77
372843 4219 4234 CAGTTGTACAAGTTGC 3-10-3 MOE 78
372921 4220 4233 AGTTGTACAAGTTG 2-10-2 MOE 79
372844 4301 4316 CACAGAGTCAGCCTTC 3-10-3 MOE 80
372922 4302 4315 ACAGAGTCAGCCTT 2-10-2 MOE 81
372845 4308 4323 GGTCAACCACAGAGTC 3-10-3 MOE 82
372923 4309 4322 GTCAACCACAGAGT 2-10-2 MOE 83
346601 5588 5601 CAGCCACATGCAGC 3-8-3 MOE 84
346602 5589 5602 CCAGCCACATGCAG 3-8-3 MOE 85
346603 5590 5603 ACCAGCCACATGCA 3-8-3 MOE 86
346604 5591 5604 TACCAGCCACATGC 3-8-3 MOE 87
346605 5592 5605 TTACCAGCCACATG 3-8-3 MOE 88
346606 5593 5606 GTTACCAGCCACAT 3-8-3 MOE 89
346607 5594 5607 GGTTACCAGCCACA 3-8-3 MOE 90
346608 5595 5608 AGGTTACCAGCCAC 3-8-3 MOE 91
346609 5596 5609 TAGGTTACCAGCCA 3-8-3 MOE 92
372851 5924 5939 AGGTTCTGCTTTCAAC 3-10-3 MOE 93
372929 5925 5938 GGTTCTGCTTTCAA 2-10-2 MOE 94
372854 6664 6679 TACTGATCAAATTGTA 3-10-3 MOE 95
372932 6665 6678 ACTGATCAAATTGT 2-10-2 MOE 96
372855 6908 6923 TTTTTCTTGTATCTGG 3-10-3 MOE 97
372933 6909 6922 TTTTCTTGTATCTG 2-10-2 MOE 98
372856 7190 7205 ATCCATTAAAACCTGG 3-10-3 MOE 99
372934 7191 7204 TCCATTAAAACCTG 2-10-2 MOE 100
372858 7817 7832 ATATTGCTCTGCAAAG 3-10-3 MOE 101
372936 7818 7831 TATTGCTCTGCAAA 2-10-2 MOE 102
346610 7818 7831 TATTGCTCTGCAAA 3-8-3 MOE 102
346611 7819 7832 ATATTGCTCTGCAA 3-8-3 MOE 104
346612 7820 7833 AATATTGCTCTGCA 3-8-3 MOE 105
346613 7821 7834 GAATATTGCTCTGC 3-8-3 MOE 106
346614 7822 7835 AGAATATTGCTCTG 3-8-3 MOE 107
346615 7823 7836 TAGAATATTGCTCT 3-8-3 MOE 108
346616 7824 7837 ATAGAATATTGCTC 3-8-3 MOE 109
346617 7825 7838 GATAGAATATTGCT 3-8-3 MOE 110
346618 7826 7839 GGATAGAATATTGC 3-8-3 MOE 111
372859 7995 8010 ATGGAATCCTCAAATC 3-10-3 MOE 112
372937 7996 8009 TGGAATCCTCAAAT 2-10-2 MOE 113
372861 8336 8351 GAATTCTGGTATGTGA 3-10-3 MOE 114
372939 8337 8350 AATTCTGGTATGTG 2-10-2 MOE 115
372862 8341 8356 AGCTGGAATTCTGGTA 3-10-3 MOE 116
372940 8342 8355 GCTGGAATTCTGGT 2-10-2 MOE 117
372863 8539 8554 TGAAAATCAAAATTGA 3-10-3 MOE 118
372941 8540 8553 GAAAATCAAAATTG 2-10-2 MOE 119
372871 9344 9359 AAACAGTGCATAGTTA 3-10-3 MOE 120
372949 9345 9358 AACAGTGCATAGTT 2-10-2 MOE 121
372872 9515 9530 TTCAGGAATTGTTAAA 3-10-3 MOE 122
372950 9516 9529 TCAGGAATTGTTAA 2-10-2 MOE 123
372875 9794 9809 TTTTGTTTCATTATAG 3-10-3 MOE 124
372953 9795 9808 TTTGTTTCATTATA 2-10-2 MOE 125
372877 10157 10172 GATGACACTTGATTTA 3-10-3 MOE 126
372955 10158 10171 ATGACACTTGATTT 2-10-2 MOE 127
372878 10161 10176 GTGTGATGACACTTGA 3-10-3 MOE 128
372956 10162 10175 TGTGATGACACTTG 2-10-2 MOE 129
372879 10167 10182 TATTCAGTGTGATGAC 3-10-3 MOE 130
372957 10168 10181 ATTCAGTGTGATGA 2-10-2 MOE 131
372880 10172 10187 ATTGGTATTCAGTGTG 3-10-3 MOE 132
372958 10173 10186 TTGGTATTCAGTGT 2-10-2 MOE 133
346619 10838 10851 CCTCTAGCTGTAAG 3-8-3 MOE 134
346620 10839 10852 CCCTCTAGCTGTAA 3-8-3 MOE 135
346621 10840 10853 GCCCTCTAGCTGTA 3-8-3 MOE 136
346622 10841 10854 GGCCCTCTAGCTGT 3-8-3 MOE 137
346623 10842 10855 AGGCCCTCTAGCTG 3-8-3 MOE 138
346624 10843 10856 GAGGCCCTCTAGCT 3-8-3 MOE 139
346625 10844 10857 AGAGGCCCTCTAGC 3-8-3 MOE 140
346626 10845 10858 AAGAGGCCCTCTAG 3-8-3 MOE 141
346627 10846 10859 AAAGAGGCCCTCTA 3-8-3 MOE 142
372890 13689 13704 GAATGGACAGGTCAAT 3-10-3 MOE 143
372968 13690 13703 AATGGACAGGTCAA 2-10-2 MOE 144
372891 13694 13709 GTTTTGAATGGACAGG 3-10-3 MOE 145
372969 13695 13708 TTTTGAATGGACAG 2-10-2 MOE 146
372892 13699 13714 TGGTAGTTTTGAATGG 3-10-3 MOE 147
372970 13700 13713 GGTAGTTTTGAATG 2-10-2 MOE 148
346628 13907 13920 TCACTGTATGGTTT 3-8-3 MOE 149
346629 13908 13921 CTCACTGTATGGTT 3-8-3 MOE 150
346630 13909 13922 GCTCACTGTATGGT 3-8-3 MOE 151
346631 13910 13923 GGCTCACTGTATGG 3-8-3 MOE 152
346632 13911 13924 TGGCTCACTGTATG 3-8-3 MOE 153
346633 13912 13925 CTGGCTCACTGTAT 3-8-3 MOE 154
346634 13913 13926 GCTGGCTCACTGTA 3-8-3 MOE 155
346635 13914 13927 GGCTGGCTCACTGT 3-8-3 MOE 156
346636 13915 13928 AGGCTGGCTCACTG 3-8-3 MOE 157
346637 13963 13976 CAGGTCCAGTTCAT 3-8-3 MOE 158
346638 13964 13977 GCAGGTCCAGTTCA 3-8-3 MOE 159
346639 13965 13978 TGCAGGTCCAGTTC 3-8-3 MOE 160
346640 13966 13979 GTGCAGGTCCAGTT 3-8-3 MOE 161
346641 13967 13980 GGTGCAGGTCCAGT 3-8-3 MOE 162
346642 13968 13981 TGGTGCAGGTCCAG 3-8-3 MOE 163
346643 13969 13982 TTGGTGCAGGTCCA 3-8-3 MOE 164
346644 13970 13983 TTTGGTGCAGGTCC 3-8-3 MOE 165
346645 13971 13984 CTTTGGTGCAGGTC 3-8-3 MOE 166
346646 14051 14064 TAACTCAGATCCTG 3-8-3 MOE 167
346647 14052 14065 ATAACTCAGATCCT 3-8-3 MOE 168
346648 14053 14066 AATAACTCAGATCC 3-8-3 MOE 169
346649 14054 14067 AAATAACTCAGATC 3-8-3 MOE 170
346650 14055 14068 AAAATAACTCAGAT 3-8-3 MOE 171
346651 14056 14069 CAAAATAACTCAGA 3-8-3 MOE 172
346652 14057 14070 GCAAAATAACTCAG 3-8-3 MOE 173
346653 14058 14071 AGCAAAATAACTCA 3-8-3 MOE 174
346654 14059 14072 TAGCAAAATAACTC 3-8-3 MOE 175
Table 3: targeting SEQ ID NO:1 and have the short antisense compounds of 1 or 2 mispairing
Isis NO.5 ' target site3 ' target siteSequence (5 '-3 ')The Gapmer die body SEQ ID NO
372894 771 784 CGGAGGTGCTTGAA 2-10-2 MOE 17
372905 1111 1124 CAGGGCCTGGAGAG 2-10-2 MOE 176
346628 1493 1506 TCACTGTATGGTTT 3-8-3 MOE 149
372828 2006 2021 TCTGAAGTCCATGATC 3-10-3 MOE 177
372906 2007 2020 CTGAAGTCCATGAT 2-10-2 MOE 178
372830 2382 2397 TGGGCATGATTCCATT 3-10-3 MOE 179
372908 2383 2396 GGGCATGATTCCAT 2-10-2 MOE 180
346616 3162 3175 ATAGAATATTGCTC 3-8-3 MOE 109
346617 3163 3176 GATAGAATATTGCT 3-8-3 MOE 110
372929 3513 3526 GGTTCTGCTTTCAA 2-10-2 MOE 94
372946 3800 3813 TGGAGCCCACGTGC 2-10-2 MOE 181
372904 4040 4053 CACTGGAGGATGTG 2-10-2 MOE 46
372842 4084 4099 TTGAAGTTGAGGGCTG 3-10-3 MOE 182
372920 4085 4098 TGAAGTTGAGGGCT 2-10-2 MOE 183
346586 4778 4791 TGTTGCCACATTGC 3-8-3 MOE 35
372847 5030 5045 ACCAGTATTAATTTTG 3-10-3 MOE 184
372925 5031 5044 CCAGTATTAATTTT 2-10-2 MOE 185
372848 5192 5207 GTGTTCTTTGAAGCGG 3-10-3 MOE 186
372926 5193 5206 TGTTCTTTGAAGCG 2-10-2 MOE 187
372953 5625 5638 TTTGTTTCATTATA 2-10-2 MOE 125
372935 7585 7598 AGTTACTTTGGTGT 2-10-2 MOE 188
372860 8255 8270 TGGTACATGGAAGTCT 3-10-3 MOE 189
372938 8256 8269 GGTACATGGAAGTC 2-10-2 MOE 190
391260 8256 8269 GGTACATGGAAGTC 2-10-2 MOE 190
392068 8256 8269 GGTACATGGAAGTC 2-10-2 MOE 190
387462 8256 8269 GGTACATGGAAGTC2-10-2 methylene oxygen base BNA 190
391872 8256 8269 GGTACATGGAAGTCCytosine in 1-1-10-2 2 '-(butyl acetamido)-palmitamide methylene oxygen base BNA/ methylene oxygen base BNA interval is not modified 190
380148 8256 8269 GGTACATGGAAGTC2-10-2 methylene oxygen base BNA 190
391871 8256 8269 GGTACATGGAAGTCCytosine in 1-1-10-2 2 '-(butyl acetamido)-palmitamide/MOE/MOE interval is not modified 190
391755 8256 8269 GGTACATGGAAGTC2-10-2ENA mC is only in the pterion 190
398296 8256 8269 GGTACATGGAAGTC2-10-2 (6 ' S)-6 '-methyl-methylene oxygen base 190
The BNA cytosine is not modified
372942 8455 8468 TCCATGCCATATGT 2-10-2 MOE 200
372865 8888 8903 CCCTGAAGAAGTCCAT 3-10-3 MOE 201
372943 8889 8902 CCTGAAGAAGTCCA 2-10-2 MOE 202
372866 8908 8923 GCCCAGTTCCATGACC 3-10-3 MOE 203
372944 8909 8922 CCCAGTTCCATGAC 2-10-2 MOE 204
372867 9058 9073 TTGAGGAAGCCAGATT 3-10-3 MOE 205
372945 9059 9072 TGAGGAAGCCAGAT 2-10-2 MOE 206
372870 9261 9276 TGGATGCAGTAATCTC 3-10-3 MOE 207
372948 9262 9275 GGATGCAGTAATCT 2-10-2 MOE 208
372881 10185 10200 TATAAAGTCCAGCATT 3-10-3 MOE 209
372959 10186 10199 ATAAAGTCCAGCAT 2-10-2 MOE 210
372882 10445 10460 AAGTTCCTGCTTGAAG 3-10-3 MOE 211
372960 10446 10459 AGTTCCTGCTTGAA 2-10-2 MOE 212
372964 11451 11464 AATGGTGAAGTACT 2-10-2 MOE 213
346612 13459 13472 AATATTGCTCTGCA 3-8-3 MOE 105
346613 13460 13473 GAATATTGCTCTGC 3-8-3 MOE 106
In certain embodiments, the target zone is the nucleotide 263-278 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 263-278 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO:16 or 17.In some this embodiment, the short antisense compounds of the nucleotide 263-278 of targeting SEQ ID NO:1 is selected from Isis NO.372816 or 372894.
In certain embodiments, the target zone is the nucleotide 428-483 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 428-483 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 18,19,20,21,22,23,24,25,26 or 27.In some this embodiment, the short antisense compounds of the nucleotide 428-483 of targeting SEQ ID NO:1 is selected from Isis NO.372817,372895,372818,372896,372819,372897,372820,372898,372821 or 372899.
In certain embodiments, the target zone is the nucleotide 428-458 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 428-458 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 18,19,20,21,22,23,24 or 25.In some this embodiment, the short antisense compounds of the nucleotide 428-458 of targeting SEQ ID NO:1 is selected from Isis NO.372817,372895,372818,372896,372819,372897,372820 or 372898.
In certain embodiments, the target zone is the nucleotide 468-483 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 468-483 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 26 or 27.In some this embodiment, the short antisense compounds of the nucleotide 468-483 of targeting SEQ ID NO:1 is selected from Isis NO.372821 or 372899.
In certain embodiments, the target zone is the nucleotide 587-607 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 587-607 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 28,29,30 or 31.In some this embodiment, the short antisense compounds of the nucleotide 587-607 of targeting SEQ ID NO:1 is selected from ISIS NO.372822,372900,372823 or 372901.
In certain embodiments, the target zone is the nucleotide 715-736 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 715-736 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 32,33,34,35,36,37,38,39 or 40.In some this embodiment, the short antisense compounds of the nucleotide 715-736 of targeting SEQ ID NO:1 is selected from Isis NO.346583,346584,346585,346586,346587,346588,346589,346590 or 346591.
In certain embodiments, the target zone is the nucleotide 929-944 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 929-944 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 41 or 42.In some this embodiment, the short antisense compounds of the nucleotide 929-944 of targeting SEQ ID NO:1 is selected from Isis NO.372824 or 372902.
In certain embodiments, the target zone is the nucleotide 1256-1319 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 1256-1319 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 43,44,45 or 46.In some this embodiment, the short antisense compounds of the nucleotide 1256-1319 of targeting SEQ ID NO:1 is selected from Isis NO.372825,372903,372826 or 372904.
In certain embodiments, the target zone is the nucleotide 1256-1271 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 1256-1271 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 43 or 44.In some this embodiment, the short antisense compounds of the nucleotide 1256-1271 of targeting SEQ ID NO:1 is selected from Isis NO.372825 or 372903.
In certain embodiments, the target zone is the nucleotide 1304-1319 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 1304-1319 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 45 or 46.In some this embodiment, the short antisense compounds of the nucleotide 1304-1319 of targeting SEQ ID NO:1 is selected from Isis NO.372826 or 372904.
In certain embodiments, the target zone is the nucleotide 2135-2150 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 2135-2150 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 47 or 48.In some this embodiment, the short antisense compounds of the nucleotide 2135-2150 of targeting SEQ ID NO:1 is selected from ISIS NO.372829 or 372907.
In certain embodiments, the target zone is the nucleotide 2774-2794 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 2774-2794 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 49,50,51 or 52.In some this embodiment, the short antisense compounds of the nucleotide 2774-2794 of targeting SEQ ID NO:1 is selected from ISIS NO.372832,372910,372833 or 372911.
In certain embodiments, the target zone is the nucleotide 2961-2976 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 2961-2976 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 53 or 54.In some this embodiment, the short antisense compounds of the nucleotide 2961-2976 of targeting SEQ ID NO:1 is selected from ISIS NO.372835 or 372913.
In certain embodiments, the target zone is the nucleotide 3248-3269 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 3248-3269 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 55,56,57,58,59,60,61,62 or 63.In some this embodiment, the short antisense compounds of the nucleotide 3248-3269 of targeting SEQID NO:1 is selected from ISIS NO.346592,346593,346594,346595,346596,346597,346598,346599 or 346600.
In certain embodiments, the target zone is the nucleotide 3350-3375 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 3350-3375 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 64,65,66,67,68 or 69.In some this embodiment, the short antisense compounds of the nucleotide 3350-3375 of targeting SEQ ID NO:1 is selected from ISIS NO.372836,372914,372837,372915,372838 or 372916.
In certain embodiments, the target zone is the nucleotide 3409-3424 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 3409-3424 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 70 or 73.In some this embodiment, the short antisense compounds of the nucleotide 3409-3424 of targeting SEQ ID NO:1 is selected from ISIS NO.372839,387461,380147 or 372917.
In certain embodiments, the target zone is the nucleotide 3573-3588 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 3573-3588 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 74 or 75.In some this embodiment, the short antisense compounds of the nucleotide 3573-3588 of targeting SEQ ID NO:1 is selected from ISIS NO.372840 or 372918.
In certain embodiments, the target zone is the nucleotide 3701-3716 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 3701-3716 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 76 or 77.In some this embodiment, the short antisense compounds of the nucleotide 3701-3716 of targeting SEQ ID NO:1 is selected from ISIS NO.372841 or 372919.
In certain embodiments, the target zone is the nucleotide 4219-4234 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 4219-4234 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 78 or 79.In some this embodiment, the short antisense compounds of the nucleotide 4219-4234 of targeting SEQ ID NO:1 is selected from ISIS NO.372843 or 372921.
In certain embodiments, the target zone is the nucleotide 4301-4323 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 4301-4323 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 80,81,82 or 83.In some this embodiment, the short antisense compounds of the nucleotide 4301-4323 of targeting SEQ ID NO:1 is selected from ISIS NO.372844,372922,372845 or 372923.
In certain embodiments, the target zone is the nucleotide 5588-5609 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 5588-5609 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 84,85,86,87,88,89,90,91 or 92.In some this embodiment, the short antisense compounds of the nucleotide 5588-5609 of targeting SEQID NO:1 is selected from ISIS NO.346601,346602,346603,346604,346605,346606,346607,346608 or 346609.
In certain embodiments, the target zone is the nucleotide 5924-5939 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 5924-5939 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 93 or 94.In some this embodiment, the short antisense compounds of the nucleotide 5924-5939 of targeting SEQ ID NO:1 is selected from ISIS NO.372851 or 372929.
In certain embodiments, the target zone is the nucleotide 6664-6679 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 6664-6679 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 95 or 96.In some this embodiment, the short antisense compounds of the nucleotide 6664-6679 of targeting SEQ ID NO:1 is selected from ISIS NO.372854 or 372932.
In certain embodiments, the target zone is the nucleotide 6908-6923 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 6908-6923 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 97 or 98.In some this embodiment, the short antisense compounds of the nucleotide 6908-6923 of targeting SEQ ID NO:1 is selected from ISIS NO.372855 or 372933.
In certain embodiments, the target zone is the nucleotide 7190-7205 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 7190-7205 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 99 or 100.In some this embodiment, the short antisense compounds of the nucleotide 7190-7205 of targeting SEQ ID NO:1 is selected from ISIS NO.372856 or 372934.
In certain embodiments, the target zone is the nucleotide 7817-7839 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 7817-7839 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 101,102,104,105,106,107,108,109,110 or 111.In some this embodiment, the short antisense compounds of the nucleotide 7817-7839 of targeting SEQ ID NO:1 is selected from ISIS NO.372858,372936,346610,346611,346612,346613,346614,346615,346616,346617 or 346618.
In certain embodiments, the target zone is the nucleotide 7995-8010 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 7995-8010 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 112 or 113.In some this embodiment, the short antisense compounds of the nucleotide 7995-8010 of targeting SEQ ID NO:1 is selected from ISIS NO.372859 or 372937.
In certain embodiments, the target zone is the nucleotide 8336-8356 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 8336-8356 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 114,115,116 or 117.In some this embodiment, the short antisense compounds of the nucleotide 8336-8356 of targeting SEQ ID NO:1 is selected from ISIS NO.372861,372939,372862 or 372940.
In certain embodiments, the target zone is the nucleotide 8539-8554 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 8539-8554 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 118 or 119.In some this embodiment, the short antisense compounds of the nucleotide 8539-8554 of targeting SEQ ID NO:1 is selected from ISIS NO.372863 or 372941.
In certain embodiments, the target zone is the nucleotide 9344-9359 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 9344-9359 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 120 or 121.In some this embodiment, the short antisense compounds of the nucleotide 9344-9359 of targeting SEQ ID NO:1 is selected from ISIS NO.372871 or 372949.
In certain embodiments, the target zone is the nucleotide 9515-9530 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 9515-9530 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 122 or 123.In some this embodiment, the short antisense compounds of the nucleotide 9515-9530 of targeting SEQ ID NO:1 is selected from ISIS NO.372872 or 372950.
In certain embodiments, the target zone is the nucleotide 9794-9809 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 9794-9809 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 124 or 125.In some this embodiment, the short antisense compounds of the nucleotide 9794-9809 of targeting SEQ ID NO:1 is selected from ISIS NO.372875 or 372953.
In certain embodiments, the target zone is the nucleotide 10157-10187 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 10157-10187 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 126,127,128,129,130,131,132 or 133.In some this embodiment, the short antisense compounds of the nucleotide 10157-10187 of targeting SEQ ID NO:1 is selected from ISISNO.372877,372955,372878,372956,372879,372957,372880 or 372958.
In certain embodiments, the target zone is the nucleotide 10838-10859 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 10838-10859 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 134,135,136,137,138,139,140,141 or 142.In some this embodiment, the short antisense compounds of the nucleotide 10838-10859 of targeting SEQ ID NO:1 is selected from ISIS NO.346619,346620,346621,346622,346623,346624,346625,346626 or 346627.
In certain embodiments, the target zone is the nucleotide 13689-13714 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 13689-13714 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 143,144,145,146,147 or 148.In some this embodiment, the short antisense compounds of the nucleotide 13689-13714 of targeting SEQ IDNO:1 is selected from ISIS NO.372890,372968,372891,372969,372892 or 372970.
In certain embodiments, the target zone is the nucleotide 13907-13928 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 13907-13928 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 149,150,151,152,153,154,155,156 or 157.In some this embodiment, the short antisense compounds of the nucleotide 13907-13928 of targeting SEQ ID NO:1 is selected from ISIS NO.346628,346629,346630,346631,346632,346633,346634,346635 or 346636.
In certain embodiments, the target zone is the nucleotide 13963-13984 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 13963-13984 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 158,159,160,161,162,163,164,165 or 166.In some this embodiment, the short antisense compounds of the nucleotide 13963-13984 of targeting SEQ ID NO:1 is selected from ISIS NO.346637,346638,346639,346640,346641,346642,346643,346644 or 346645.
In certain embodiments, the target zone is the nucleotide 14051-14072 of SEQ ID NO:1.In some this embodiment, the short antisense compounds of the nucleotide 14051-14072 of targeting SEQ ID NO:1 comprises the nucleotide sequence that is selected from SEQ ID NO 167,168,169,170,171,172,173,174 or 175.In some this embodiment, the short antisense compounds of the nucleotide 14051-14072 of targeting SEQ ID NO:1 is selected from ISIS NO.346646,346647,346648,346649,346650,346651,346652,346653 or 346654.
In certain embodiments, its length of short antisense compounds of targeting ApoB nucleic acid is 8-16, preferred 9-15, more preferably 9-14, more preferably 10-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting ApoB nucleic acid is 9-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting ApoB nucleic acid is 10-14 nucleotide.In certain embodiments, this short antisense compounds is short antisense oligonucleotide.
In certain embodiments, the short antisense compounds of targeting ApoB nucleic acid is short gapmer.In some this embodiment, comprise at least one high-affinity in the short gapmer of targeting ApoB nucleic acid one or more pterions therein and modify.In certain embodiments, the short antisense compounds of targeting ApoB nucleic acid comprises 1-3 high-affinity modification in each pterion.In some this embodiment, the nucleoside in pterion or nucleotide comprise 2 ' and modify.In some this embodiment, the monomer in pterion is BNA.In some this embodiment, the monomer in pterion is selected from α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA, β-D-methylene oxygen base (4 '-CH2-O-2 ') BNA, ethyleneoxy group (4 '-(CH2)2-O-2 ') BNA, amino oxygen base (4 '-CH2-O-N (R)-2 ') BNA and oxygen base amino (4 '-CH2-N (R)-O-2 ') BNA.In certain embodiments, the monomer in pterion comprises in 2 ' position and is selected from following substituent group: pi-allyl, amino, azido, thio group, O-pi-allyl, O-C1-C10Alkyl ,-OCF3, O-(CH2)2-O-CH3, 2 '-O (CH2)2SCH3, O-(CH2)2-O-N (Rm) (Rn) or O-CH2-C (=O)-N (Rm) (Rn), each R whereinmAnd RnIndependent is H or substituted or unsubstituted C1-C10Alkyl.In certain embodiments, the monomer in pterion is 2 ' MOE nucleotide.
In certain embodiments, the short antisense compounds of targeting ApoB nucleic acid comprises between 5 ' pterion and 3 ' pterion at interval.In certain embodiments, comprise 5,6,7,8,9,10,11,12,13 or 14 monomers at interval.In certain embodiments, Jian Ge monomer is not modified deoxyribonucleotide.In certain embodiments, Jian Ge monomer is not modified ribonucleotide.In certain embodiments, modify (if any) at interval and cause producing such antisense compounds, when in conjunction with its target nucleic acids, this chemical compound can be supported the cutting of RNA enzyme (including but not limited to RNA enzyme H).
In certain embodiments, the short antisense compounds of targeting ApoB nucleic acid has the same Dan Julian key.In some this embodiment, these keys all are that thiophosphate connects key.In certain embodiments, Lian Jian is that di-phosphate ester connects key.In certain embodiments, the short antisense compounds of targeting ApoB nucleic acid has mixed matrix.
In certain embodiments, its length of short antisense compounds of targeting ApoB nucleic acid is 8 monomers.In certain embodiments, its length of short antisense compounds of targeting ApoB nucleic acid is 9 monomers.In certain embodiments, its length of short antisense compounds of targeting ApoB nucleic acid is 10 monomers.In certain embodiments, its length of short antisense compounds of targeting ApoB nucleic acid is 11 monomers.In certain embodiments, its length of short antisense compounds of targeting ApoB nucleic acid is 12 monomers.In certain embodiments, its length of short antisense compounds of targeting ApoB nucleic acid is 13 monomers.In certain embodiments, its length of short antisense compounds of targeting ApoB nucleic acid is 14 monomers.In certain embodiments, its length of short antisense compounds of targeting ApoB nucleic acid is 15 monomers.In certain embodiments, its length of short antisense compounds of targeting ApoB nucleic acid is 16 monomers.In certain embodiments, the short antisense compounds of targeting ApoB nucleic acid comprises 9-15 monomer.In certain embodiments, the short antisense compounds of targeting ApoB nucleic acid comprises 10-15 monomer.In certain embodiments, the short antisense compounds of targeting ApoB nucleic acid comprises 12-14 monomer.In certain embodiments, the short antisense compounds of targeting ApoB nucleic acid comprises 12-14 nucleotide or nucleoside.
In certain embodiments, the invention provides the method for the expression of regulating ApoB.In certain embodiments, this method comprises the short antisense compounds that uses one or more targeting ApoB nucleic acid, and wherein the short antisense compounds of this targeting ApoB nucleic acid is about 8 to about 16, preferably 9-15, more preferably 9-14, more preferably 10-14 monomer (promptly about 8 monomer to about 16 connections).Those of ordinary skills will appreciate that, this comprises the method that the short antisense compounds that uses one or more 8,9,10,11,12,13,14,15 or 16 monomeric targeting ApoB nucleic acid is regulated the expression of ApoB.
In certain embodiments, the method for adjusting ApoB comprises that using length is the short antisense compounds of 8 monomeric targeting ApoB nucleic acid.In certain embodiments, the method for adjusting ApoB comprises that using length is the short antisense compounds of 9 monomeric targeting ApoB nucleic acid.In certain embodiments, the method for adjusting ApoB comprises that using length is the short antisense compounds of 10 monomeric targeting ApoB nucleic acid.In certain embodiments, the method for adjusting ApoB comprises that using length is the short antisense compounds of 11 monomeric targeting ApoB nucleic acid.In certain embodiments, the method for adjusting ApoB comprises that using length is the short antisense compounds of 12 monomeric targeting ApoB nucleic acid.In certain embodiments, the method for adjusting ApoB comprises that using length is the short antisense compounds of 13 monomeric targeting ApoB nucleic acid.In certain embodiments, the method for adjusting ApoB comprises that using length is the short antisense compounds of 14 monomeric targeting ApoB nucleic acid.In certain embodiments, the method for adjusting ApoB comprises that using length is the short antisense compounds of 15 monomeric targeting ApoB nucleic acid.In certain embodiments, the method for adjusting ApoB comprises that using length is the short antisense compounds of 16 monomeric targeting ApoB nucleic acid.
In certain embodiments, the method for the expression of adjusting ApoB comprises that use comprises the short antisense compounds of 9-15 monomeric targeting ApoB nucleic acid.In certain embodiments, the method for the expression of adjusting ApoB comprises that use comprises the short antisense compounds of 10-15 monomeric targeting ApoB nucleic acid.In certain embodiments, the method for the expression of adjusting ApoB comprises that use comprises the short antisense compounds of 12-14 monomeric targeting ApoB nucleic acid.In certain embodiments, the method for the expression of adjusting ApoB comprises the short antisense compounds that uses the targeting ApoB nucleic acid that comprises 12-14 nucleotide or nucleoside.
In certain embodiments, the short antisense compounds of targeting ApoB nucleic acid can have short antisense compounds characteristic or feature any or that multiple this paper summarized.In certain embodiments, the short antisense compounds of targeting ApoB nucleic acid has and is selected from following die body (pterion-deoxidation interval-pterion): 1-12-1,1-1-10-2,2-10-1-1,3-10-3,2-10-3,2-10-2,1-10-1,1-10-2,3-8-3,2-8-2,1-8-1,3-6-3 or 1-6-1, more preferably 1-10-1,2-10-2,3-10-3 and 1-9-2.
2.SGLT-2
Sodium dependent glucose transport protein 2 (SGLT-2) is expressed in kidney proximal tubule epithelial cell, absorbs glucose again and prevents the effect of loss of glucose in urine thereby play.For the people's gene group, SGLT-2 is a member in the 11 member families of sodium substrate cotransporter.Many these family members enjoy sequence homology, and for example SGLT-1 and SGLT-2 enjoy about 59% sequence homogeneity, enjoy about 70% sequence homogeneity with SGLT-3.SGLT-1 is the glucose transporter that is present among heart and the CNS.SGLT-3 is the sodium channel of experiencing glucose in the small intestinal.The separation station-keeping mode of these SGLTs is a difference part between these homologies family member.(Handlon,A.L.,Expert Opin.Ther.Patents(2005)15(11):1532-1540;Kanai et al.,J.Clin.Invest.,1994,93,397-404;Wellset al.,Am.J.Physiol.Endocrinol.Metab.,1992,263,F459-465)。
To being expelled to studies have shown that of people SGLT2 in Xenopus laevis (Xenopus) oocyte, this albumen mass-energy mediation D-glucose and Alpha-Methyl-D-pyranglucoside (α-MeGlc; A kind of glucalogue) sodium dependency transhipment, wherein the Km value to α-MeGlc is 1.6mM, sodium and glucose coupling ratio are 1: 1 (Kanai et al., J.Clin.Invest., 1994,93,397-404; You et al., J.Biol.Chem., 1995,270,29365-29371).This transport activity is suppressed by phlorhizin, and phlorhizin is a kind of plant glucosides, can be in conjunction with the glucose site of SGLTs but do not transported, thereby suppress the SGLT effect (You et al., J.Biol.Chem., 1995,270,29365-29371).
Diabetes are to be the disease of feature with the hyperglycemia due to the insulin action deficiency.Chronic hyperglycemia is the major risk factors that comprises the diabetes related complication of heart disease, retinopathy, nephropathy and neuropathy.Because kidney plays important effect in the adjusting of plasma glucose levels, the kidney glucose transporter just becoming noticeable drug targets (Wright, Am.J.Physiol.Renal Physiol., 2001,280, F10-18).Diabetic nephropathy is the common cause of the end-stage renal disease that develops in many diabeticss.The glucose toxicity that causes by long-term hyperglycemia can in diabetics, cause organize the dependency insulin resistance (Nawano et al., Am.J.Physiol.Endocrinol.Metab., 2000,278, E535-543).
Definition
" sodium dependent glucose transport protein 2 " is that its expression is treated by lacking gene outcome or the protein that antisense compounds is regulated.Sodium dependent glucose transport protein 2 is commonly referred to SGLT2, but also can be described as SLC5A2; Sodium-glucose transporter 2; Sodium glucose co-transporter 2 is white, the kidney low-affinity; Cotransporter, kidney; Solute carrier family 5 (sodium/glucose transporter), the member 2; SL52.
" SGLT2 nucleic acid " means the nucleic acid of any coding SGLT2.For example, in certain embodiments, SGLT2 nucleic acid include but not limited to the to encode DNA sequence of SGLT2, the RNA sequence of transcribing from the DNA of coding SGLT2 and the mRNA sequence of coding SGLT2." SGLT2mRNA " means the proteic mRNA of coding SGLT2.
The treatment indication
In certain embodiments, lack the expression that antisense compounds is used for regulating SGLT-2 and related protein.In certain embodiments, this adjusting is can include but not limited to that the short antisense compounds of the target nucleic acids molecular hybridization of following material realizes with one or more codings by providing: SGLT2, SL52, SLC5A2, sodium glucose co-transporter 2 is white, kidney low-affinity sodium glucose co-transporter 2 is white, kidney sodium glucose co-transporter 2 white 2 and solute carrier family 5 sodium/glucose transporter member 2.Also provide the method for treatment metabolic disease as herein described and/or cardiovascular disease and disease.In specific embodiment, the short antisense compounds that can suppress the expression of SGLT2 be used for reducing in the method for blood glucose levels of animal and postpone or the method for the outbreak of prevention type ii diabetes in.This method comprises that one or more The compounds of this invention with treatment or prevention effective dose to need to give the animal for the treatment of.These one or more chemical compounds can be the short antisense compounds of the nucleic acid of targeting coding SGLT2.This paper provides the method for the inhibition of the SGLT2 expression that strengthens in kidney cell or the renal tissue, and described method comprises that the short antisense compounds of the nucleic acid that makes this cell or tissue and one or more The compounds of this invention such as targeting coding SGLT2 contacts.
Though described some chemical compound, compositions and method specially according to some embodiment, following example only is a chemical compound in order to demonstrate the invention, and is not intended to and limits these chemical compounds.
In certain embodiments, lacking antisense compounds is the chimeric oligomeric compounds with mix sulphur substituted phosphate and phosphodiester backbone.The short antisense compounds of some mixed matrix has the central authorities interval that comprises at least 5 adjacency 2 '-deoxynucleoside, and this interval flank is connected to two pterions, and each pterion comprises at least 12 '-O-methoxy ethyl nucleoside.In certain embodiments, connecting key between the nucleoside of mixed matrix chemical compound, is that thiophosphate connects key in the interval, is that di-phosphate ester connects key in two pterions.In certain embodiments, the mixed matrix chemical compound has thiophosphate and connects key in the pterion, exception be oligonucleotide 5 ' and 3 ' terminal one or simultaneously two ends have 1 di-phosphate ester to connect key.In certain embodiments, the short antisense compounds of targeting SGLT2 has the 3-10-3 of being selected from, 2-10-3,2-10-2,1-10-1, the die body of 1-10-2,2-8-2,1-9-2,1-8-1,3-6-3 or 1-6-1 (pterion-deoxidation interval-pterion).In certain embodiments, the short antisense compounds of targeting SGLT2 has the die body (pterion-deoxidation interval-pterion) that is selected from 1-10-1,1-10-2,2-8-2,1-9-2,1-8-1,3-6-3 or 1-6-1.
In certain embodiments, targeting SGLT2 nucleic acid and short antisense compounds with mixed matrix effectively are delivered in the kidney.In certain embodiments, the short antisense compounds that gives targeting SGLT2 nucleic acid and have a mixed matrix can cause the target gene in the kidney to express adjusted.In some this embodiment, liver or Toxicity of Kidney are few or do not have.In certain embodiments, targeting SGLT2 nucleic acid and short antisense compounds with mixed matrix with compare except not having the identical short antisense compounds in external other aspects of mixture skeleton, having more usefulness aspect the reduction SGLT-2mRNA, and onset is faster.In some this embodiment, the usefulness of this raising and/or the toxicity of reduction are in mice and/or rat.In some this embodiment, the usefulness of this raising and/or the toxicity of reduction are in the people.
For example and only for purposes of illustration, only comprising thiophosphate and connect the ISIS145733 of key and comprise di-phosphate ester connect key and comprise the ISIS 257016 that thiophosphate connects key in the interval in the pterion, is identical in other respects.The both comprises sequence GAAGTAGCCACCAACTGTGC (SEQ ID NO.1572).These two oligonucleotide also comprise the interval of being made up of 10 2 '-deoxyribonucleotides, and every side joint at interval has 52 '-methoxy ethyl (2 '-MOE) nucleotide.All cytidine residues all are the 5-methylcytidines.Mixed matrix Compound I SIS 257016 compares with non-mixing parent compound ISIS 145733, is having more usefulness (referring to embodiment 9) aspect the reduction SGLT-2mRNA.
Pharmacokinetic to a certain mixed matrix Compound I SIS 257016 shows that in certain embodiments, this chemical compound plays the effect of prodrug, can be metabolised to the pharmacophore of 12 nuclear bases.To studies show that of this short antisense compounds of 12 nuclear bases corresponding to ISIS 257016 of ISIS 370717, this chemical compound has the pharmacological action (pharmacological profile) similar to ISIS 257016, but onset is faster.ISIS 370717 is 12 nuclear base antisense oligonucleotides of targeting SGLT-2, comprises sequence TAGCCACCAACT (SEQ ID NO.1554), also comprises the interval of being made up of 10 2 '-deoxyribonucleotides, and both sides respectively are connected to the pterion of 1 nucleotide at interval.(2 '-MOE) nucleotide is formed by 2 '-methoxy ethyl in the pterion.All cytidine residues all are the 5-methylcytidines.In whole oligonucleotide, connecting key between nucleoside is thiophosphate (P=S).The similarity of the pharmacological activity of ISIS 257016 and ISIS 370717 has been supported this pharmacokinetic result, and promptly ISIS 257016 is the prodrugs (referring to embodiment 10) with 12 nucleotide pharmacophore.In addition, to the great loss of activity that studies show that of stabilisation (end the adds medicated cap) version of ISIS 257016.
In certain embodiments, comprise the monomeric short antisense compounds of 2 ' MOE and be delivered to effectively in the kidney in the pterion, the treatment of carrying out with this chemical compound causes in the kidney target gene expression effectively to be regulated, and does not have liver or Toxicity of Kidney.This paper is proof also further, and in certain embodiments, the parent oligonucleotide of the SGLT-2mRNA in short antisense compounds and targeting mice and the rat is compared, and having more usefulness aspect the SGLT-2mRNA reducing, and onset is faster.This paper confirms that the short at interval aggressiveness (shortmer) of 2 ' MOE can improve usefulness and bioavailability than parent compound.
For example and only for purposes of illustration, the research of ISIS 370717 is disclosed, short antisense compounds is compared with longer parent significantly higher accumulation in renal tissue (about 50 milligrams/gram tissue).In addition, SGLT-2mRNA descends compared with the control above 80% (referring to embodiment 11).ISIS 370717 1-10-1 gapmer are used as the relevant oligonucleotide (sequence related oligos with varying motifs) of sequence that template for preparing has different die bodys.About the research that pterion, interval and total length around the assessment ISIS 370,717 12 mer oligonucleotide change can be referring to embodiment 12.Some evaluated die body comprises 1-10-1,2-8-2,1-8-1,3-6-3 and 1-6-1 (referring to the table 60 among the embodiment 12).Analyzed the effect of chemical compound to the SGLT2mRNA level.All die bodys all suppress SGLT2 expression in the body in the dose dependent mode.Find that 1-10-1,2-8-2 and 1-8-1 gapmer have usefulness especially.Use these die bodys, SGLT-2 mRNA descends compared with the control and surpasses 80%.
In certain embodiments, the invention provides targeting SGLT2 nucleic acid and have the short antisense compounds of the die body that is selected from 1-10-1 and 1-10-2 MOE gapmer.(referring to the table 62 among the embodiment 13).Analyzed of the effect of some this chemical compound to rat SGLT2mRNA.Presentation of results in the table 63,1-10-1 and 1-10-2 MOE gapmer all are to suppress SGLT2 expression in the body in the dose dependent mode, and the decline of SGLT-2mRNA can reach and surpass 80%.
Some other 1-10-1 and 2-8-2MOE gapmer (referring to for example embodiment 14 and 15) in mice and rat body inner model, have also been assessed.Many 1-10-1 and 2-8-2MOEgapmer have realized that under relatively low oligonucleotide concentration SGLT-2mRNA descends above 80%, and without any toxic action.
In another non-limiting example, also analyzed the effect of 388625 couples of Canis familiaris L. SGLT2mRNA of ISIS level.To the research explanation that Canis familiaris L. carries out, can realize that under the dosage of 1mg/kg/wk the expression of SGLT2 is suppressed above 80%.Under high slightly dosage, can realize bigger inhibition.Also confirm in Canis familiaris L., to give ISIS 388625 and improved glucose tolerance.In the glucose tolerance test of standard, to compare with saline control, the peak value plasma glucose levels on average descends and surpasses 50%, and the decline of glucose subsequently weakens (referring to embodiment 17).Equally, compare with the animal of PBS and control treatment, confirm in diabetes rat model, short antisense compounds is passed in time and can significantly be reduced plasma glucose levels and HbA1C (referring to embodiment 16).
Animal in all researchs all further carries out the toxicity assessment.For example, TBW and liver, spleen and kidney weight have been assessed.The significant change of spleen, liver weight or body weight can show that certain specific compound can cause toxic action.Find that all variations are all in the error span scope.In therapeutic process or when research stops, do not observe significant body weight change.Do not observe the significant change of liver or spleen weight.
The short antisense compounds of some targeting SGLT2 nucleic acid
In certain embodiments, lacking the antisense compounds targeting hasThe SGLT2 nucleic acid of the sequence of searching number NM_003041.1 (being incorporated herein) with SEQ ID NO:2.In some this embodiment, short antisense compounds and the SEQID NO:3 of targeting SEQ ID NO:3 have at least 90% complementarity.In some this embodiment, the short antisense compounds of targeting SEQ IDNO:3 and SEQ ID NO:3 have at least 95% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:1 of targeting SEQ ID NO:3 have 100% complementarity.In certain embodiments, the short antisense compounds of targeting SEQ ID NO:3 comprises the nucleotide sequence that is selected from the nucleotide sequence that provides in table 4 and 5.
The nucleotide sequence that each SEQ ID NO provides in the table 4 and 5 is independent of any modification to sugar moieties, Dan Julian key or nuclear base.Thus, the defined short antisense compounds of certain SEQ ID NO can comprise one or more to connecting the modification of key or nuclear base between sugar moieties, nucleoside independently.Isis number (Isis NO.) described antisense compounds represented the nuclear base sequence with one or more to connecting key between sugar moieties, nucleoside or examining the combination of the modification of base.
Table 4 and 5 has been enumerated the example of the short antisense compounds of targeting SEQ ID NO:3.Table 4 has been enumerated the short antisense compounds that 100% complementarity is arranged with SEQ ID NO:3.Table 5 has been enumerated the short antisense compounds that has one or two mispairing with respect to SEQ ID NO:3.The file that is marked with " gapmer die body " is represented the pterion of each short antisense compounds-at interval-pterion die body.Spacer segment comprises 2 '-deoxyribonucleotide, and each nucleotide of each pterion section comprises the sugar through 2 '-modification.The concrete sugar through 2 '-modification is also represented in " gapmer die body " file.For example, " 2-10-2 MOE " means 2-10-2 gapmer die body, and wherein the spacer segment flank of 10 2 '-deoxyribonucleotides is connected to the pterion section of 2 nucleotide, and wherein the nucleotide of pterion section is 2 '-MOE nucleotide.Connecting key between nucleoside is thiophosphate.Short antisense compounds comprises the 5-methylcytidine that substitutes not modified cytosine, unless show " not modified cytosine " in the gapmer die body file, represented in this case cytosine is not modified cytosine.For example, " 5-mC is only in the interval " expression spacer segment has the 5-methylcytidine, and the pterion section has not modified cytosine.
Table 4: the short antisense compounds of targeting SEQ ID NO:3
ISIS No5 ' target site3 ' target siteSequence (5 '-3 ')The Gapmer die body SEQ ID NO
379684 84 95 TGTCAGCAGGAT 1-10-1 MOE 214
405193 113 124 CAGCAGGAAATA 2-8-2 MOE 215
405194 114 125 CCAGCAGGAAAT 2-8-2 MOE 216
405195 115 126 ACCAGCAGGAAA 2-8-2 MOE 217
405196 116 127 GACCAGCAGGAA 2-8-2 MOE 218
405197 117 128 TGACCAGCAGGA 2-8-2 MOE 219
379685 117 128 TGACCAGCAGGA 1-10-1 MOE 219
405198 118 129 ATGACCAGCAGG 2-8-2 MOE 221
405199 119 130 AATGACCAGCAG 2-8-2 MOE 222
405200 120 131 CAATGACCAGCA 2-8-2 MOE 223
405201 121 132 CCAATGACCAGC 2-8-2 MOE 224
379686 135 146 ACCACAAGCCAA 1-10-1 MOE 225
379711 172 183 TAGCCGCCCACA 1-10-1 MOE 226
388628 172 183 TAGCCGCCCACA 2-8-2 MOE 226
405202 207 218 CCGGCCACCACA 2-8-2 MOE 228
405203 208 219 ACCGGCCACCAC 2-8-2 MOE 229
405204 236 247 GATGTTGCTGGC 2-8-2 MOE 230
379687 236 247 GATGTTGCTGGC 1-10-1 MOE 230
405205 237 248 CGATGTTGCTGG 2-8-2 MOE 232
405206 238 249 CCGATGTTGCTG 2-8-2 MOE 233
405207 239 250 GCCGATGTTGCT 2-8-2 MOE 234
405208 240 251 TGCCGATGTTGC 2-8-2 MOE 235
405209 241 252 CTGCCGATGTTG 2-8-2 MOE 236
405210 260 271 CAGGCCCACAAA 2-8-2 MOE 237
405211 261 272 CCAGGCCCACAA 2-8-2 MOE 238
405212 262 273 GCCAGGCCCACA 2-8-2 MOE 239
379688 288 299 CCAAGCCACTTG 1-10-1 MOE 240
379689 318 329 AGAGCGCATTCC 1-10-1 MOE 241
379690 435 446 ACAGGTAGAGGC 1-10-1 MOE 242
405248 474 485 AGATCTTGGTGA 2-8-2 MOE 243
379691 474 485 AGATCTTGGTGA 1-10-1 MOE 243
382676 527 539 TGTTCCAGCCCAG 1-10-2 MOE 245
388625 528 539 TGTTCCAGCCCA 2-8-2 MOE 246
389780 528 539 TGTTCCAGCCCA 1-9-2 MOE 246
379692 528 539 TGTTCCAGCCCA 1-10-1 MOE 246
392170 528 539 TGTTCCAGCCCA1-10-1 methylene oxygen base BNA 246
392173 528 539 TGTTCCAGCCCA2-8-2 methylene oxygen base BNA 246
405213 529 540 ATGTTCCAGCCC 2-8-2 MOE 251
405214 564 575 TGGTGATGCCCA 2-8-2 MOE 252
405215 565 576 ATGGTGATGCCC 2-8-2 MOE 253
405216 566 577 CATGGTGATGCC 2-8-2 MOE 254
379693 566 577 CATGGTGATGCC 1-10-1 MOE 254
405217 567 578 TCATGGTGATGC 2-8-2 MOE 256
405218 568 579 ATCATGGTGATG 2-8-2 MOE 257
405219 587 598 CCCTCCTGTCAC 2-8-2 MOE 258
405220 588 599 GCCCTCCTGTCA 2-8-2 MOE 259
405221 589 600 AGCCCTCCTGTC 2-8-2 MOE 260
405222 590 601 CAGCCCTCCTGT 2-8-2 MOE 261
405223 591 602 CCAGCCCTCCTG 2-8-2 MOE 262
405224 592 603 GCCAGCCCTCCT 2-8-2 MOE 263
379694 629 640 GACGAAGGTCTG 1-10-1 MOE 264
405225 707 718 GTATTTGTCGAA 2-8-2 MOE 265
379695 737 748 GGACACCGTCAG 1-10-1 MOE 266
379696 974 985 CAGCTTCAGGTA 1-10-1 MOE 267
405226 998 1009 CATGACCATGAG 2-8-2 MOE 268
405227 999 1010 GCATGACCATGA 2-8-2 MOE 269
405228 1000 1011 GGCATGACCATG 2-8-2 MOE 270
405229 1001 1012 TGGCATGACCAT 2-8-2 MOE 271
405230 1002 1013 CTGGCATGACCA 2-8-2 MOE 272
379697 1002 1013 CTGGCATGACCA 1-10-1 MOE 272
405231 1003 1014 CCTGGCATGACC 2-8-2 MOE 274
379698 1091 1102 GCAGCCCACCTC 1-10-1 MOE 275
405232 1092 1103 AGCAGCCCACCT 2-8-2 MOE 276
405233 1093 1104 GAGCAGCCCACC 2-8-2 MOE 277
405234 1130 1141 CATGAGCTTCAC 2-8-2 MOE 278
405235 1131 1142 GCATGAGCTTCA 2-8-2 MOE 279
382677 1131 1143 GGCATGAGCTTCA 1-10-2 MOE 280
388626 1132 1143 GGCATGAGCTTC 2-8-2 MOE 281
379699 1132 1143 GGCATGAGCTTC 1-10-1 MOE 281
405236 1133 1144 GGGCATGAGCTT 2-8-2 MOE 283
405237 1157 1168 CAGCATGAGTCC 2-8-2 MOE 284
405238 1158 1169 CCAGCATGAGTC 2-8-2 MOE 285
379700 1158 1169 CCAGCATGAGTC 1-10-1 MOE 285
405239 1159 1170 GCCAGCATGAGT 2-8-2 MOE 287
379701 1230 1241 CCATGGTGAAGA 1-10-1 MOE 288
405240 1542 1553 CACAGCTGCCCG 2-8-2 MOE 289
405241 1543 1554 ACACAGCTGCCC 2-8-2 MOE 290
405242 1544 1555 CACACAGCTGCC 2-8-2 MOE 291
382678 1544 1556 GCACACAGCTGCC 1-10-2 MOE 292
388627 1545 1556 GCACACAGCTGC 2-8-2 MOE 293
379702 1545 1556 GCACACAGCTGC 1-10-1 MOE 293
379703 1701 1712 GCCGGAGACTGA 1-10-1 MOE 295
405243 1976 1987 ATTGAGGTTGAC 2-8-2 MOE 296
405244 1977 1988 CATTGAGGTTGA 2-8-2 MOE 297
405245 1978 1989 GCATTGAGGTTG 2-8-2 MOE 298
405246 1979 1990 GGCATTGAGGTT 2-8-2 MOE 299
405247 1980 1991 GGGCATTGAGGT 2-8-2 MOE 300
Table 5: targeting SEQ ID NO:3 and have the short antisense compounds of 1 or 2 mispairing
ISIS No5 ' target site3 ' target siteSequence (5 '-3 ')The Gapmer die body SEQ ID NO
405200 96 107 CAATGACCAGCA 2-8-2 MOE 223
405215 382 393 ATGGTGATGCCC 2-8-2 MOE 253
405216 383 394 CATGGTGATGCC 2-8-2 MOE 254
379693 383 394 CATGGTGATGCC 1-10-1 MOE 254
379701 471 482 CCATGGTGAAGA 1-10-1 MOE 288
405218 472 483 ATCATGGTGATG 2-8-2 MOE 257
405246 536 547 GGCATTGAGGTT 2-8-2 MOE 299
405248 570 581 AGATCTTGGTGA 2-8-2 MOE 243
379691 570 581 AGATCTTGGTGA 1-10-1 MOE 243
379698 683 694 GCAGCCCACCTC 1-10-1 MOE 275
405232 684 695 AGCAGCCCACCT 2-8-2 MOE 276
379711 685 696 TAGCCGCCCACA 1-10-1 MOE 226
388628 685 696 TAGCCGCCCACA 2-8-2 MOE 226
379698 950 961 GCAGCCCACCTC 1-10-1 MOE 275
405232 951 962 AGCAGCCCACCT 2-8-2 MOE 276
405235 978 989 GCATGAGCTTCA 2-8-2 MOE 279
382677 978 990 GGCATGAGCTTCA 1-10-2 MOE 280
388626 979 990 GGCATGAGCTTC 2-8-2 MOE 281
379699 979 990 GGCATGAGCTTC 1-10-1 MOE 281
405236 980 991 GGGCATGAGCTT 2-8-2 MOE 283
379698 1043 1054 GCAGCCCACCTC 1-10-1 MOE 275
405239 1171 1182 GCCAGCATGAGT 2-8-2 MOE 287
405209 1213 1224 CTGCCGATGTTG 2-8-2 MOE 236
405233 1364 1375 GAGCAGCCCACC 2-8-2 MOE 277
405240 1366 1377 CACAGCTGCCCG 2-8-2 MOE 289
405211 1500 1511 CCAGGCCCACAA 2-8-2 MOE 238
405212 1501 1512 GCCAGGCCCACA 2-8-2 MOE 239
379695 1643 1654 GGACACCGTCAG 1-10-1 MOE 266
379698 1875 1886 GCAGCCCACCTC 1-10-1 MOE 275
405239 1993 2004 GCCAGCATGAGT 2-8-2 MOE 287
405211 2210 2221 CCAGGCCCACAA 2-8-2 MOE 238
405212 2211 2222 GCCAGGCCCACA 2-8-2 MOE 239
In certain embodiments, the target zone is the nucleotide 85-184 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 85-184 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 85-184 comprises the nucleotide sequence that is selected from SEQ ID NO 214,215,216,217,218,219,221,222,223,224,225 or 227.In some this embodiment, the short antisense compounds of the nucleotide 85-184 of targeting SEQ ID NO:3 is selected from Isis No 379684,405193,405194,405195,405196,405197,379685,405198,405199,405200,405201,379686,379711 or 388628.
In certain embodiments, the target zone is the nucleotide 113-132 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 113-132 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 113-132 comprises the nucleotide sequence that is selected from SEQ ID NO 215,216,217,218,219,221,222,223 or 224.In some this embodiment, the short antisense compounds of the nucleotide 113-132 of targeting SEQ ID NO:3 is selected from Isis No 405193,405194,405195,405196,405197,379685,405198,405199,405200 or 405201.
In certain embodiments, the target zone is the nucleotide 207-329 of SEQ ID NO:3.3. lack in certain embodiments, the nucleotide 207-329 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 207-329 comprises the nucleotide sequence that is selected from SEQ ID NO 228,229,230,232,233,234,235,236,237,238,239,240 or 241.In some this embodiment, the short antisense compounds of the nucleotide 207-329 of targeting SEQ ID NO:3 is selected from Isis No405202,405203,405204,379687,405205,405206,405207,405208,405209,405210,405211,405212,379688 or 379689.
In certain embodiments, the target zone is the nucleotide 207-273 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 207-273 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 207-273 comprises the nucleotide sequence that is selected from SEQ IDNO 228,229,230,232,233,234,235,236,237,238 or 239.In some this embodiment, the short antisense compounds of the nucleotide 207-273 of targeting SEQ IDNO:3 is selected from Isis No 405202,405203,405204,379687,405205,405206,405207,405208,405209,405210,405211 or 405212.
In certain embodiments, the target zone is the nucleotide 207-219 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 207-219 of antisense compounds targeting SEQ ID NO:3.3. in some this embodiment, the short antisense compounds of targeted nucleotide 207-219 comprises the nucleotide sequence that is selected from SEQ ID NO 228 or 229.In some this embodiment, the short antisense compounds of the nucleotide 207-219 of targeting SEQ ID NO:3 is selected from Isis NO..405202 or 405203.
In certain embodiments, the target zone is the nucleotide 236-252 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 236-252 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 236-252 comprises the nucleotide sequence that is selected from SEQ ID NO 230,232,233,234,235 or 236.In some this embodiment, the short antisense compounds of the nucleotide 236-252 of targeting SEQ ID NO:3 is selected from Isis NO.405204,379687,405205,405206,405207,405208 or 405209.
In certain embodiments, the target zone is the nucleotide 260-273 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 260-273 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 260-273 comprises the nucleotide sequence that is selected from SEQ ID NO 237,238 or 239.In some this embodiment, the short antisense compounds of the nucleotide 260-273 of targeting SEQ ID NO:3 is selected from Isis NO.405210,405211 or 405212.
In certain embodiments, the target zone is the nucleotide 435-640 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 435-640 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 435-640 comprises the nucleotide sequence that is selected from SEQ ID NO 242,243,245,246,251,252,253,254,256,257,258,259,260,261,262,263 or 264.In some this embodiment, the short antisense compounds of the nucleotide 435-640 of targeting SEQ ID NO:3 is selected from Isis NO.379690,405248,379691,389780,379692,382676,388625,392170,392173,405213,405214,405215,405216,379693,405217,405218,405219,405220,405221,405222,405223,405224 or 379694.
In certain embodiments, the target zone is the nucleotide 527-540 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 527-540 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 527-540 comprises the nucleotide sequence that is selected from SEQ ID NO 245,246 or 251.In some this embodiment, the short antisense compounds of the nucleotide 527-540 of targeting SEQ ID NO:3 is selected from Isis NO.389780,379692,382676,388626,392170,392173 or 405213.
In certain embodiments, the target zone is the nucleotide 564-603 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 564-603 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 564-603 comprises the nucleotide sequence that is selected from SEQ ID NO 252,253,254,256,257,258,259,260,261,262 or 263.In some this embodiment, the short antisense compounds of the nucleotide 564-603 of targeting SEQ IDNO:3 is selected from Isis NO.405214,405215,405216,379693,405217,405218,405219,405220,405221,405222,405223 or 405224.
In certain embodiments, the target zone is the nucleotide 564-579 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 564-579 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 564-579 comprises the nucleotide sequence that is selected from SEQ ID NO 252,253,254,256 or 257.In some this embodiment, the short antisense compounds of the nucleotide 564-579 of targeting SEQ ID NO:3 is selected from Isis NO.405214,405215,405216,379693,405217 or 405218.
In certain embodiments, the target zone is the nucleotide 587-603 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 587-603 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 587-603 comprises the nucleotide sequence that is selected from SEQ ID NO 258,259,260,261,262 or 263.In some this embodiment, the short antisense compounds of the nucleotide 587-603 of targeting SEQ ID NO:3 is selected from Isis NO.405219,405220,405221,405222,405223 or 405224.
In certain embodiments, the target zone is the nucleotide 974-1014 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 974-1014 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 974-1014 comprises the nucleotide sequence that is selected from SEQ ID NO 267,268,269,270,271,272 or 274.In some this embodiment, the short antisense compounds of the nucleotide 974-1014 of targeting SEQ ID NO:3 is selected from Isis NO.379696,405226,405227,405228,405229,405230,379697 or 405231.
In certain embodiments, the target zone is the nucleotide 998-1014 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 998-1014 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 998-1014 comprises the nucleotide sequence that is selected from SEQ ID NO 268,269,270,271,272 or 274.In some this embodiment, the short antisense compounds of the nucleotide 998-1014 of targeting SEQ ID NO:3 is selected from Isis NO.405226,405227,405228,405229,405230,379697 or 405231.
In certain embodiments, the target zone is the nucleotide 1091-1170 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 1091-1170 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 1091-1170 comprises the nucleotide sequence that is selected from SEQ ID NO 275,276,277,278,279,280,281,283,284,285,286 or 287.In some this embodiment, the short antisense compounds of the nucleotide 1091-1170 of targeting SEQ ID NO:3 is selected from Isis NO.379698,405232,405233,405234,405235,388626,379699,382677,405236,405237,405238,379700 or 405239.
In certain embodiments, the target zone is the nucleotide 1091-1104 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 1091-1104 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 1091-1104 comprises the nucleotide sequence that is selected from SEQ ID NO 275,276 or 277.In some this embodiment, the short antisense compounds of the nucleotide 1091-1104 of targeting SEQ ID NO:3 is selected from Isis NO.379698,405232 or 405233.
In certain embodiments, the target zone is the nucleotide 1130-1144 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 1130-1144 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 1130-1144 comprises the nucleotide sequence that is selected from SEQ ID NO 278,279,280,281 or 283.In some this embodiment, the short antisense compounds of the nucleotide 1130-1144 of targeting SEQ ID NO:3 is selected from Isis NO.405234,405235,388626,379699,382677 or 405236.
In certain embodiments, the target zone is the nucleotide 1157-1170 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 1157-1170 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 1157-1170 comprises the nucleotide sequence that is selected from SEQ ID NO 284,285 or 287.In some this embodiment, the short antisense compounds of the nucleotide 1157-1170 of targeting SEQ ID NO:3 is selected from Isis NO.405237,405238,379700 or 405239.
In certain embodiments, the target zone is the nucleotide 1542-1556 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 1542-1556 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 1542-1556 comprises the nucleotide sequence that is selected from SEQ ID NO 289,290,291,292 or 293.In some this embodiment, the short antisense compounds of the nucleotide 1542-1556 of targeting SEQ ID NO:3 is selected from Isis NO.405240,405241,405242,388629,379702 or 382678.
In certain embodiments, the target zone is the nucleotide 1976-1991 of SEQ ID NO:3.In certain embodiments, lack the nucleotide 1976-1991 of antisense compounds targeting SEQ ID NO:3.In some this embodiment, the short antisense compounds of targeted nucleotide 1976-1991 comprises the nucleotide sequence that is selected from SEQ ID NO 296,297,298,299 or 300.In some this embodiment, the short antisense compounds of the nucleotide 1976-1991 of targeting SEQ ID NO:3 is selected from Isis NO.405243,405244,405245,405246 or 405247.
In certain embodiments, its length of short antisense compounds of targeting SGLT2 nucleic acid is 8-16, preferred 9-15, more preferably 9-14, more preferably 10-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting SGLT2 nucleic acid is 9-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting SGLT2 nucleic acid is 10-14 nucleotide.In certain embodiments, this short antisense compounds is short antisense oligonucleotide.
In certain embodiments, the short antisense compounds of targeting SGLT2 nucleic acid is short gapmer.In some this embodiment, comprise at least one high-affinity in one or more pterions of the short gapmer of targeting SGLT2 nucleic acid in chemical compound and modify.In certain embodiments, the short antisense compounds of targeting SGLT2 nucleic acid comprises 1-3 high-affinity modification in each pterion.In some this embodiment, the nucleoside in pterion or nucleotide comprise 2 ' and modify.In some this embodiment, the monomer in pterion is BNA.In some this embodiment, the monomer in pterion is selected from α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA, β-D-methylene oxygen base (4 '-CH2-O-2 ') BNA, ethyleneoxy group (4 '-(CH2)2-O-2 ') BNA, amino oxygen base (4 '-CH2-O-N (R)-2 ') BNA and oxygen base amino (4 '-CH2-N (R)-O-2 ') BNA.In certain embodiments, the monomer in pterion comprises in 2 ' position and is selected from following substituent group: pi-allyl, amino, azido, thio group, O-pi-allyl, O-C1-C10Alkyl ,-OCF3, O-(CH2)2-O-CH3, 2 '-O (CH2)2SCH3, O-(CH2)2-O-N (Rm) (Rn) and O-CH2-C (=O)-N (Rm) (Rn), each R whereinmAnd RnIndependent is H or substituted or unsubstituted C1-C10Alkyl.In certain embodiments, the monomer in pterion is 2 ' MOE nucleotide.
In certain embodiments, the short antisense compounds of targeting SGLT2 nucleic acid comprises between 5 ' pterion and 3 ' pterion at interval.In certain embodiments, comprise 5,6,7,8,9,10,11,12,13 or 14 monomers at interval.In certain embodiments, Jian Ge monomer is not modified deoxyribonucleotide.In certain embodiments, Jian Ge monomer is not modified ribonucleotide.In certain embodiments, modify (if any) at interval and cause producing such antisense compounds, when in conjunction with its target nucleic acids, this chemical compound can be supported the cutting of RNA enzyme (including but not limited to RNA enzyme H).
In certain embodiments, the short antisense compounds of targeting SGLT2 nucleic acid has the same Dan Julian key.In some this embodiment, these keys all are that thiophosphate connects key.In certain embodiments, Lian Jian is that di-phosphate ester connects key.In certain embodiments, the short antisense compounds of targeting SGLT2 nucleic acid has mixed matrix.
In certain embodiments, its length of short antisense compounds of targeting SGLT2 nucleic acid is 8 monomers.In certain embodiments, its length of short antisense compounds of targeting SGLT2 nucleic acid is 9 monomers.In certain embodiments, its length of short antisense compounds of targeting SGLT2 nucleic acid is 10 monomers.In certain embodiments, its length of short antisense compounds of targeting SGLT2 nucleic acid is 11 monomers.In certain embodiments, its length of short antisense compounds of targeting SGLT2 nucleic acid is 12 monomers.In certain embodiments, its length of short antisense compounds of targeting SGLT2 nucleic acid is 13 monomers.In certain embodiments, its length of short antisense compounds of targeting SGLT2 nucleic acid is 14 monomers.In certain embodiments, its length of short antisense compounds of targeting SGLT2 nucleic acid is 15 monomers.In certain embodiments, its length of short antisense compounds of targeting SGLT2 nucleic acid is 16 monomers.
In certain embodiments, the short antisense compounds of targeting SGLT2 nucleic acid comprises 9-15 monomer.In certain embodiments, the short antisense compounds of targeting SGLT2 nucleic acid comprises 10-15 monomer.In certain embodiments, the short antisense compounds of targeting SGLT2 nucleic acid comprises 12-14 monomer.In certain embodiments, the short antisense compounds of targeting SGLT2 nucleic acid comprises 12-14 nucleotide or nucleoside.
In certain embodiments, the invention provides the method for the expression of regulating SGLT2.In certain embodiments, this method comprises the short antisense compounds that uses one or more targeting SGLT2 nucleic acid, and wherein the short antisense compounds of this targeting SGLT2 nucleic acid is about 8 to about 16, preferably 9-15, more preferably 9-14, more preferably 10-14 monomer (promptly about 8 monomer to about 16 connections).Those of ordinary skills will appreciate that, this comprises the method that the short antisense compounds that uses one or more 8,9,10,11,12,13,14,15 or 16 monomeric targeting SGLT2 nucleic acid is regulated the expression of SGLT2.
In certain embodiments, the method for adjusting SGLT2 comprises that using length is the short antisense compounds of 8 monomeric targeting SGLT2 nucleic acid.In certain embodiments, the method for adjusting SGLT2 comprises that using length is the short antisense compounds of 9 monomeric targeting SGLT2 nucleic acid.In certain embodiments, the method for adjusting SGLT2 comprises that using length is the short antisense compounds of 10 monomeric targeting SGLT2 nucleic acid.In certain embodiments, the method for adjusting SGLT2 comprises that using length is the short antisense compounds of 11 monomeric targeting SGLT2 nucleic acid.In certain embodiments, the method for adjusting SGLT2 comprises that using length is the short antisense compounds of 12 monomeric targeting SGLT2 nucleic acid.In certain embodiments, the method for adjusting SGLT2 comprises that using length is the short antisense compounds of 13 monomeric targeting SGLT2 nucleic acid.In certain embodiments, the method for adjusting SGLT2 comprises that using length is the short antisense compounds of 14 monomeric targeting SGLT2 nucleic acid.In certain embodiments, the method for adjusting SGLT2 comprises that using length is the short antisense compounds of 15 monomeric targeting SGLT2 nucleic acid.In certain embodiments, the method for adjusting SGLT2 comprises that using length is the short antisense compounds of 16 monomeric targeting SGLT2 nucleic acid.
In certain embodiments, the method for the expression of adjusting SGLT2 comprises that use comprises the short antisense compounds of 9-15 monomeric targeting SGLT2 nucleic acid.In certain embodiments, the method for the expression of adjusting SGLT2 comprises that use comprises the short antisense compounds of 10-15 monomeric targeting SGLT2 nucleic acid.In certain embodiments, the method for the expression of adjusting SGLT2 comprises that use comprises the short antisense compounds of 12-14 monomeric targeting SGLT2 nucleic acid.In certain embodiments, the method for the expression of adjusting SGLT2 comprises the short antisense compounds that uses the targeting SGLT2 nucleic acid that comprises 12-14 nucleotide or nucleoside.
3.PCSK9
To suffer from the high LDL-C level in the individuality of autosomal dominant hypercholesterolemia (ADH), with the coding LDL-receptor (LDL-R), apolipoprotein B (apoB) or crude protein (proprotein) invertase subtilisin/kexin type 9 (PCSK9) gene in sudden change associate (Abifadel et al., Nat.Genet., 2003,34:154-156).Obtain function mutation (gain-of-function mutation) when relevant with high LDL-C level in finding PCSK9, PCSK9 is accredited as three locus relevant with ADH.The interior assembling of born of the same parents and the secretion of the lipoprotein of triglyceride are rich in the ApoB participation, and are the parts of LDL-R.PCSK9 is considered to reduce the LDL-R expression in the liver.The liver picked-up that contains the ApoB lipoprotein during the reduction that LDL-R expresses causes circulating reduces, and this causes cholesterol to raise.
Definition
" PCSK9 " is that its expression is treated by lacking gene outcome or the protein that antisense compounds is regulated.
" PCSK9 nucleic acid " means the nucleic acid of any coding PCSK9.For example, in certain embodiments, PCSK9 nucleic acid include but not limited to the to encode DNA sequence of PCSK9, RNA sequence of transcribing from the DNA of coding PCSK9 and the mRNA sequence of coding PCSK9.
" PCSK9mRNA " means the mRNA of coding PCSK9.
PCSK9 treats indication
In certain embodiments, the invention provides the method for the expression of regulating the PCSK9 in the individuality, described method comprises the short antisense compounds that gives targeting PCSK9 nucleic acid.In certain embodiments, the invention provides the individual method of treatment, described method comprises and gives one or more pharmaceutical compositions of the present invention.In certain embodiments, individuality suffers from hypercholesterolemia, Combination dyslipidemia, atherosclerosis, the atherosclerotic risk of development, coronary heart disease, coronary disease medical history, the coronary heart disease of early showing effect, one or more coronary heart disease risk factors, type ii diabetes, type ii diabetes companion dyslipidemia, dyslipidemia, hypertriglyceridemia, hyperlipemia, high fatty acid mass formed by blood stasis, fatty degeneration of liver, non-alcoholic stellato-hepatitis or non-alcohol fatty liver.
The guilding principle that lipid reduces therapy by u.s. national cholesterol education program (NCEP) adult treatment expert scheme III (ATPIII) in calendar year 2001 set up and upgraded in 2004 (Grundyet al., Circulation, 2004,110,227-239).This guilding principle comprises acquisition complete lipoprotein general picture (profile) after fasting in 9-12 hour usually, to determine LDL-C, T-CHOL and HDL-C level.According to the guilding principle of up-to-date formulation, 130-159mg/dL, 160-189mg/dL and think critical height, height and high level respectively more than or equal to the LDL-C level of 190mg/dL.200-239mg/dL and think critical height and high level respectively more than or equal to the total cholesterol level of 240mg/dL.HDL-C level less than 40mg/dL is thought low-level.
In certain embodiments, this individuality has been confirmed as carrying out lipid reduction therapy.In some this embodiment, according to upgrading (Grundyet al. in calendar year 2001 foundation and in 2004 by u.s. national cholesterol education program (NCEP) adult treatment expert scheme III (ATPIII), Circulation, 2004,110, guilding principle 227-239), this individuality have been confirmed as carrying out lipid and have reduced therapy.In certain embodiments, need carry out its LDL-C of this individuality that lipid reduces therapy and be higher than 190mg/dL.In certain embodiments, need carry out its LDL-C of this individuality that lipid reduces therapy and be higher than 160mg/dL.In certain embodiments, need carry out its LDL-C of this individuality that lipid reduces therapy and be higher than 130mg/dL.In certain embodiments, need carry out its LDL-C of this individuality that lipid reduces therapy and be higher than 100mg/dL.In some this embodiment, this individuality that need carry out lipid reduction therapy should keep LDL-C to be lower than 160mg/dL.In some this embodiment, this individuality that need carry out lipid reduction therapy should keep LDL-C to be lower than 130mg/dL.In some this embodiment, this individuality that need carry out lipid reduction therapy should keep LDL-C to be lower than 100mg/dL.In some this embodiment, this individuality should keep LDL-C to be lower than 70mg/dL.
In certain embodiments, the invention provides the method that reduces the ApoB in the individuality.In certain embodiments, the invention provides the method that contains the ApoB lipoprotein that reduces in the individuality.In certain embodiments, the invention provides the method that reduces the LDL-C in the individuality.In certain embodiments, the invention provides the method that reduces the VLDL-C in the individuality.In certain embodiments, the invention provides the method that reduces the IDL-C in the individuality.In certain embodiments, the invention provides the method that reduces the non-IDL-C in the individuality.In certain embodiments, the invention provides the method that reduces the Lp (a) in the individuality.In certain embodiments, the invention provides the method that reduces the serum triglycerides in the individuality.In certain embodiments, the invention provides the method that reduces the liver tg in the individuality.In certain embodiments, the invention provides the method that reduces the Ox-LDL-C in the individuality.In certain embodiments, the invention provides the particulate method of little LDL that reduces in the individuality.In certain embodiments, the invention provides the particulate method of little VLDL that reduces in the individuality.In certain embodiments, the invention provides the method that reduces the phospholipid in the individuality.In certain embodiments, the invention provides the method that reduces the oxidized phospholipids in the individuality.
In certain embodiments, method provided by the invention does not reduce HDL-C.In certain embodiments, method provided by the invention does not cause the accumulation of lipid in liver.
In certain embodiments, the pharmaceutical composition that comprises the short antisense compounds of targeting PCSK9 nucleic acid is for using in treatment.In certain embodiments, described treatment is the reduction of LDL-C, ApoB, VLDL-C, IDL-C, non-HDL-C, Lp (a), serum triglycerides, liver tg, Ox-LDL-C, little LDL granule, little VLDL, phospholipid or oxidized phospholipids in the individuality.In certain embodiments, described treatment is to following treatment of diseases: hypercholesterolemia, Combination dyslipidemia, atherosclerosis, the atherosclerotic risk of development, coronary heart disease, coronary disease medical history, the coronary heart disease of early showing effect, one or more coronary heart disease risk factors, type ii diabetes, type ii diabetes companion dyslipidemia, dyslipidemia, hypertriglyceridemia, hyperlipemia, high fatty acid mass formed by blood stasis, fatty degeneration of liver, non-alcoholic stellato-hepatitis or non-alcohol fatty liver.In other embodiments, treatment is the reduction of CHD risk.In certain embodiments, treatment is atherosclerotic prevention.In certain embodiments, treatment is the prevention of coronary heart disease.
In certain embodiments, the pharmaceutical composition that will comprise the short antisense compounds of targeting PCSK9 nucleic acid is used for preparing the medicine in order to LDL-C, ApoB, VLDL-C, IDL-C, non-HDL-C, Lp (a), serum triglycerides, liver tg, Ox-LDL-C, little LDL granule, little VLDL, phospholipid or the oxidized phospholipids that reduces individuality.In certain embodiments, the pharmaceutical composition that will comprise the short antisense compounds of targeting PCKS9 nucleic acid is used to prepare in order to reduce the medicine of coronary heart disease risk.In certain embodiments, the short antisense compounds of targeting PCSK9 nucleic acid is used to prepare in order to treat the medicine of following disease: hypercholesterolemia, Combination dyslipidemia, atherosclerosis, the atherosclerotic risk of development, coronary heart disease, coronary disease medical history, the coronary heart disease of early showing effect, one or more coronary heart disease risk factors, type ii diabetes, type ii diabetes companion dyslipidemia, dyslipidemia, hypertriglyceridemia, hyperlipemia, high fatty acid mass formed by blood stasis, fatty degeneration of liver, non-alcoholic stellato-hepatitis or non-alcohol fatty liver.
The PCSK9 combination treatment
In certain embodiments, one or more pharmaceutical compositions of the present invention are given altogether with one or more other medicament.In certain embodiments, described one or more other medicament be designed to its disease for the treatment of or disease identical with described one or more pharmaceutical compositions of the present invention.In certain embodiments, described one or more other medicament be designed to its disease for the treatment of or disease different with described one or more pharmaceutical compositions of the present invention.In certain embodiments, described one or more other medicament is designed to treat the ill effect of one or more pharmaceutical compositions of the present invention.In certain embodiments, one or more pharmaceutical compositions of the present invention are given altogether with another medicament, to treat the ill effect of this another medicament.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is given simultaneously.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is given at different time.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is prepared together in single dosage form.In certain embodiments, with other separately preparation of medicament of one or more pharmaceutical compositions of the present invention and one or more.
In certain embodiments, can comprise that lipid reduces medicament with the medicament that pharmaceutical composition of the present invention gives altogether.In some this embodiment, can include but not limited to atorvastatin, simvastatin, rosuvastatin with the medicament that pharmaceutical composition of the present invention gives altogether and according to Ezetimibe.In some this embodiment, lipid is reduced medicament give before the pharmaceutical composition of the present invention giving.In some this embodiment, lipid is reduced medicament after giving pharmaceutical composition of the present invention, give.In some this embodiment, lipid is reduced medicament when giving pharmaceutical composition of the present invention, give.In some this embodiment, the dosage that the lipid that gives altogether reduces medicament is identical with the dosage that gives separately to be given when lipid reduces medicament.In some this embodiment, the dosage that the lipid that gives altogether reduces medicament is lower than the dosage that is given when giving lipid reduction medicament separately.In some this embodiment, the dosage that the lipid that gives altogether reduces medicament is higher than the dosage that is given when giving lipid reduction medicament separately.
In certain embodiments, it is the HMG-CoA reductase inhibitor that the lipid that gives altogether reduces medicament.In some this embodiment, the HMG-CoA reductase inhibitor is an inhibin.In some this embodiment, inhibin is selected from atorvastatin, simvastatin, pravastatin, fluvastatin and rosuvastatin.
In certain embodiments, it is cholesterol absorption inhibitor that the lipid that gives altogether reduces medicament.In some this embodiment, cholesterol absorption inhibitor is according to Ezetimibe.
In certain embodiments, it is HMG-CoA reductase inhibitor and cholesterol absorption inhibitor formulated together altogether that the lipid that gives altogether reduces medicament.In some this embodiment, it is according to Ezetimibe/simvastatin that lipid formulated together altogether reduces medicament.
In certain embodiments, it is microsomal triglyceride transfer protein inhibitor (MTP inhibitor) that the lipid that gives altogether reduces medicament.
In certain embodiments, the medicament that gives altogether is the oligonucleotide of targeting ApoB nucleic acid.
In certain embodiments, the medicament that gives altogether is a bile acid chelating agent.In some this embodiment, bile acid chelating agent is selected from colestyramine, colestipol and colesevelam.
In certain embodiments, the medicament that gives altogether is a nicotinic acid.In some this embodiment, nicotinic acid is selected from rapid release nicotinic acid, extended release nicotinic acid and slow release nicotinic acid.
In certain embodiments, the medicament that gives altogether is a Carboxymethylcellulose.In some this embodiment, Carboxymethylcellulose is selected from gemfibrozil, fenofibrate, chlorine Bei Te, bezafibrate and ciprofibrate.
More examples of the medicament that can give altogether with pharmaceutical composition of the present invention include but not limited to corticosteroid (including but not limited to prednisone); Immunoglobulin (includes but not limited to vein immunoglobulin (IVIg); Analgesic (for example acetaminophen); Antiinflammatory (including but not limited to NSAID (non-steroidal anti-inflammatory drug) (for example ibuprofen, COX-1 inhibitor and cox 2 inhibitor)); Salicylate; Antibiotic; Antiviral agent; Antifungal; Antidiabetic medicine (for example biguanide, glucosidase inhibitor, insulin, sulfonylureas and thiazolidinediones); The adrenergic modulation agent; Diuretic; Hormone (for example short anabolism steroid, androgen, estrogen, calcitonin, progesterone, somatostatin and thyroxin); Immunomodulator; Muscle relaxant; Hydryllin; Osteoporosis medicament (for example diphosphonate, calcitonin and estrogen); Prostaglandin; Antineoplastic agent; The spiritual healing medicament; Tranquilizer; Poison Oak Tree (oak) or black poison wood (sumac) product; Antibody and vaccine.
In certain embodiments, pharmaceutical composition of the present invention can be reduced therapy in conjunction with lipid gives.In some this embodiment, it is that curative life style changes that lipid reduces therapy.In some this embodiment, it is the LDL Apheresis that lipid reduces therapy.
The short antisense compounds of some targeting PCSK9 nucleic acid
In certain embodiments, lacking the antisense compounds targeting has
Figure A20078002541601141
The PCSK9 nucleic acid of the sequence of searching number NM_174936.2 (being incorporated herein) with SEQ ID NO:4.
In some this embodiment, short antisense compounds and the SEQID NO:4 of targeting SEQ ID NO:4 have at least 90% complementarity.In some this embodiment, the short antisense compounds of targeting SEQ IDNO:4 and SEQ ID NO:4 have at least 95% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:4 of targeting SEQ ID NO:4 have 100% complementarity.In certain embodiments, the short antisense compounds of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from the nucleotide sequence that provides in table 6 and 7.
The nucleotide sequence that each SEQ ID NO provides in the table 6 and 7 is independent of any to connecting the modification of key or nuclear base between sugar moieties, nucleoside.Thus, the defined short antisense compounds of certain SEQ ID NO can comprise one or more to connecting the modification of key or nuclear base between sugar moieties, nucleoside independently.Isis number (Isis NO.) described antisense compounds represented the nuclear base sequence with one or more to connecting key between sugar moieties, nucleoside or examining the combination of the modification of base.
Table 6 and 7 has been enumerated the example of the short antisense compounds of targeting SEQ ID NO:4.Table 6 has been enumerated the short antisense compounds that 100% complementarity is arranged with SEQ ID NO:4.Table 7 has been enumerated the short antisense compounds that has one or two mispairing with respect to SEQ ID NO:4.The file that is marked with " gapmer die body " is represented the pterion of each short antisense compounds-at interval-pterion die body.Spacer segment comprises 2 '-deoxyribonucleotide, and each nucleotide of each pterion section comprises the sugar through 2 '-modification.The concrete sugar through 2 '-modification is also represented in " gapmer die body " file.For example, " 2-10-2 MOE " means 2-10-2 gapmer die body, and wherein the spacer segment both sides of 10 2 '-deoxyribonucleotides are connected to the pterion section of 2 nucleotide, and wherein the nucleotide of pterion section is 2 '-MOE nucleotide.Connecting key between nucleoside is thiophosphate.Short antisense compounds comprises the 5-methylcytidine that substitutes not modified cytosine, unless show " not modified cytosine " in the gapmer die body file, represented in this case cytosine is not modified cytosine.For example, " 5-mC is only in the interval " expression spacer segment has the 5-methylcytidine, and the pterion section has not modified cytosine.
Table 6: the short antisense compounds of targeting SEQ ID NO:4
ISIS NO.5 ' target site3 ' target siteSequence (5 '-3 ')The Gapmer die body SEQ ID NO
400297 695 708 ATGGGGCAACTTCA 2-10-2 MOE 329
400298 696 709 CATGGGGCAACTTC 2-10-2 MOE 330
400299 697 710 ACATGGGGCAACTT 2-10-2 MOE 331
400300 742 755 GGGATGCTCTGGGC 2-10-2 MOE 332
400301 757 770 CGCTCCAGGTTCCA 2-10-2 MOE 333
400302 828 841 GATACACCTCCACC 2-10-2 MOE 334
400303 829 842 AGATACACCTCCAC 2-10-2 MOE 335
400304 830 843 GAGATACACCTCCA 2-10-2 MOE 336
400305 937 950 GCCTGTCTGTGGAA 2-10-2 MOE 337
400306 952 965 CTGTCACACTTGCT 2-10-2 MOE 338
400307 988 1001 CGGCCGCTGACCAC 2-10-2 MOE 339
400308 989 1002 CCGGCCGCTGACCA 2-10-2 MOE 340
400309 990 1003 CCCGGCCGCTGACC 2-10-2 MOE 341
400310 991 1004 TCCCGGCCGCTGAC 2-10-2 MOE 342
400311 992 1005 ATCCCGGCCGCTGA 2-10-2 MOE 343
400312 993 1006 CATCCCGGCCGCTG 2-10-2 MOE 344
400313 994 1007 GCATCCCGGCCGCT 2-10-2 MOE 345
400314 1057 1070 GTGCCCTTCCCTTG 2-10-2 MOE 346
400315 1075 1088 ATGAGGGTGCCGCT 2-10-2 MOE 347
400316 1076 1089 TATGAGGGTGCCGC 2-10-2 MOE 348
400317 1077 1090 CTATGAGGGTGCCG 2-10-2 MOE 349
400318 1078 1091 CCTATGAGGGTGCC 2-10-2 MOE 350
400319 1093 1106 CGAATAAACTCCAG 2-10-2 MOE 351
400320 1094 1107 CCGAATAAACTCCA 2-10-2 MOE 352
400321 1095 1108 TCCGAATAAACTCC 2-10-2 MOE 353
400322 1096 1109 TTCCGAATAAACTC 2-10-2 MOE 354
400323 1147 1160 GCCAGGGGCAGCAG 2-10-2 MOE 355
400324 1255 1268 GAGTAGAGGCAGGC 2-10-2 MOE 356
400325 1334 1347 CCCCAAAGTCCCCA 2-10-2 MOE 357
400326 1335 1348 TCCCCAAAGTCCCC 2-10-2 MOE 358
400327 1336 1349 GTCCCCAAAGTCCC 2-10-2 MOE 359
400328 1453 1466 ACGTGGGCAGCAGC 2-10-2 MOE 360
400329 1454 1467 CACGTGGGCAGCAG 2-10-2 MOE 361
400330 1455 1468 CCACGTGGGCAGCA 2-10-2 MOE 362
400331 1456 1469 GCCACGTGGGCAGC 2-10-2 MOE 363
400332 1569 1582 CAGGGAACCAGGCC 2-10-2 MOE 364
400333 1570 1583 TCAGGGAACCAGGC 2-10-2 MOE 365
400334 1571 1584 CTCAGGGAACCAGG 2-10-2 MOE 366
400335 1572 1585 CCTCAGGGAACCAG 2-10-2 MOE 367
400336 1573 1586 TCCTCAGGGAACCA 2-10-2 MOE 368
400337 1574 1587 GTCCTCAGGGAACC 2-10-2 MOE 369
400338 1575 1588 GGTCCTCAGGGAAC 2-10-2 MOE 370
400339 1576 1589 TGGTCCTCAGGGAA 2-10-2 MOE 371
400340 1577 1590 CTGGTCCTCAGGGA 2-10-2 MOE 372
400341 1578 1591 GCTGGTCCTCAGGG 2-10-2 MOE 373
400342 1621 1634 GTGCTGGGGGGCAG 2-10-2 MOE 374
400343 1622 1635 GGTGCTGGGGGGCA 2-10-2 MOE 375
400344 1623 1636 GGGTGCTGGGGGGC 2-10-2 MOE 376
400345 1624 1637 TGGGTGCTGGGGGG 2-10-2 MOE 377
400346 1738 1751 GAGCAGCTCAGCAG 2-10-2 MOE 378
400347 1739 1752 GGAGCAGCTCAGCA 2-10-2 MOE 379
400348 1740 1753 TGGAGCAGCTCAGC 2-10-2 MOE 380
400349 1741 1754 CTGGAGCAGCTCAG 2-10-2 MOE 381
400350 1834 1847 CCCTCACCCCCAAA 2-10-2 MOE 382
400351 1835 1848 ACCCTCACCCCCAA 2-10-2 MOE 383
400352 1836 1849 CACCCTCACCCCCA 2-10-2 MOE 384
400353 1837 1850 ACACCCTCACCCCC 2-10-2 MOE 385
400354 1838 1851 GACACCCTCACCCC 2-10-2 MOE 386
400355 1839 1852 AGACACCCTCACCC 2-10-2 MOE 387
400356 1840 1853 TAGACACCCTCACC 2-10-2 MOE 388
400357 2083 2096 TGGCAGCAGGAAGC 2-10-2 MOE 389
400358 2084 2097 ATGGCAGCAGGAAG 2-10-2 MOE 390
400359 2085 2098 CATGGCAGCAGGAA 2-10-2 MOE 391
400360 2086 2099 GCATGGCAGCAGGA 2-10-2 MOE 392
400361 2316 2329 GGCAGCAGATGGCA 2-10-2 MOE 393
400362 2317 2330 CGGCAGCAGATGGC 2-10-2 MOE 394
400363 2318 2331 CCGGCAGCAGATGG 2-10-2 MOE 395
400364 2319 2332 TCCGGCAGCAGATG 2-10-2 MOE 396
400365 2320 2333 CTCCGGCAGCAGAT 2-10-2 MOE 397
400366 2321 2334 GCTCCGGCAGCAGA 2-10-2 MOE 398
400367 2322 2335 GGCTCCGGCAGCAG 2-10-2 MOE 399
400368 2323 2336 CGGCTCCGGCAGCA 2-10-2 MOE 400
400369 2324 2337 CCGGCTCCGGCAGC 2-10-2 MOE 401
400370 2325 2338 GCCGGCTCCGGCAG 2-10-2 MOE 402
400371 3543 3556 AGTTACAAAAGCAA 2-10-2 MOE 403
403739 988 1001 CGGCCGCTGACCAC2-10-2 (6 ' S)-6 '-methyl-methylene oxygen base BNA 339
403740 1455 1468 CCACGTGGGCAGCA2-10-2 (6 ' S)-6 '-methyl-methylene oxygen base BNA 362
Table 7: targeting SEQ ID NO:4 and have the short antisense compounds of 1 or 2 mispairing
ISIS NO.5 ' target site3 ' target siteSequence (5 '-3 ')The Gapmer die body SEQ ID NO
400323 349 362 GCCAGGGGCAGCAG 2-10-2 MOE 355
400370 679 692 GCCGGCTCCGGCAG 2-10-2 MOE 402
400361 1860 1873 GGCAGCAGATGGCA 2-10-2 MOE 393
400323 1873 1886 GCCAGGGGCAGCAG 2-10-2 MOE 355
400310 2257 2270 TCCCGGCCGCTGAC 2-10-2 MOE 342
400361 2653 2666 GGCAGCAGATGGCA 2-10-2 MOE 393
400350 2811 2824 CCCTCACCCCCAAA 2-10-2 MOE 382
400351 2812 2825 ACCCTCACCCCCAA 2-10-2 MOE 383
400352 2813 2826 CACCCTCACCCCCA 2-10-2 MOE 384
400353 2814 2827 ACACCCTCACCCCC 2-10-2 MOE 385
400334 2966 2979 CTCAGGGAACCAGG 2-10-2 MOE 366
400332 3379 3392 CAGGGAACCAGGCC 2-10-2 MOE 364
400340 3448 3461 CTGGTCCTCAGGGA 2-10-2 MOE 372
400341 3449 3462 GCTGGTCCTCAGGG 2-10-2 MOE 373
In certain embodiments, the target zone is the nucleotide 695-710 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 695-710 of targeting SEQ ID NO:4 comprises and is selected from SEQ ID NO:329,330 or 331 nucleotide sequence.In some this embodiment, the short antisense compounds of the nucleotide 695-710 of targeting SEQ ID NO:4 is selected from Isis NO.400297,400298 or 400299.
In certain embodiments, the target zone is the nucleotide 742-770 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 742-770 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 332 or 333.In some this embodiment, the short antisense compounds of the nucleotide 742-770 of targeting SEQ ID NO:4 is selected from Isis NO.400300 or 400301.
In certain embodiments, the target zone is the nucleotide 828-843 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 828-843 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 334,335 or 336.In some this embodiment, the short antisense compounds of the nucleotide 828-843 of targeting SEQ ID NO:4 is selected from ISIS No.400302,400303 or 400304.
In certain embodiments, the target zone is the nucleotide 937-1007 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 937-1007 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 337,338,339,340,341,342,343,344 or 345.In some this embodiment, the short antisense compounds of the nucleotide 937-1007 of targeting SEQ ID NO:4 is selected from Isis NO.400305,400306,400307,400308,400309,400310,400311,400312,400313 or 403739.
In certain embodiments, the target zone is the nucleotide 937-965 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 937-965 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 337 or 338.In some this embodiment, the short antisense compounds of the nucleotide 937-965 of targeting SEQ ID NO:4 is selected from Isis NO.400305 or 400306.
In certain embodiments, the target zone is the nucleotide 988-1007 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 988-1007 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 339,340,341,342,343,344 or 345.In some this embodiment, the short antisense compounds of the nucleotide 937-1007 of targeting SEQ IDNO:4 is selected from Isis NO.400307,400308,400309,400310,400311,400312,4003313 or 403739.
In certain embodiments, the target zone is the nucleotide 1057-1160 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 1057-1160 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 346,347,348,349,350,351,352,353,354 or 355.In some this embodiment, the short antisense compounds of the nucleotide 1057-1160 of targeting SEQ ID NO:4 is selected from ISIS NO.400314,400315,400316,400317,400318,400319,400320,400321,400322 or 400323.
In certain embodiments, the target zone is the nucleotide 1057-1109 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 1057-1109 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 346,347,348,349,350,351,352,353 or 354.In some this embodiment, the short antisense compounds of the nucleotide 1057-1109 of targeting SEQ ID NO:4 is selected from ISIS NO.400314,400315,400316,400317,400318,400319,400320,400321 or 400322.
In certain embodiments, the target zone is the nucleotide 1057-1091 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 1057-1091 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 346,347,348,349 or 350.In some this embodiment, the short antisense compounds of the nucleotide 1057-1091 of targeting SEQ ID NO:4 is selected from ISIS NO.400314,400315,400316,400317 or 400318.
In certain embodiments, the target zone is the nucleotide 1093-1109 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 1093-1109 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 351,352,353 or 354.In some this embodiment, the short antisense compounds of the nucleotide 1057-1109 of targeting SEQ ID NO:4 is selected from ISIS NO.400319,400320,400321 or 400322.
In certain embodiments, the target zone is the nucleotide 1334-1349 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 1334-1349 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 357,358 or 359.In some this embodiment, the short antisense compounds of the nucleotide 1334-1349 of targeting SEQ ID NO:4 is selected from ISIS NO 400325,400326 or 400327.
In certain embodiments, the target zone is the nucleotide 1453-1469 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 1453-1469 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 360,361,362 or 363.In some this embodiment, the short antisense compounds of the nucleotide 1453-1469 of targeting SEQ ID NO:4 is selected from ISIS NO 400328,400329,400330,400331 or 403470.
In certain embodiments, the target zone is the nucleotide 1569-1591 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 1569-1591 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 364,365,366,367,368,369,370,371,372 or 373.In some this embodiment, the short antisense compounds of the nucleotide 1569-1591 of targeting SEQ ID NO:4 is selected from ISIS NO 400332,400333,400334,400335,400336,400337,400338,400339,400340 or 400341.
In certain embodiments, the target zone is the nucleotide 1621-1637 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 1621-1637 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 374,375,376 or 377.In some this embodiment, the short antisense compounds of the nucleotide 1621-1637 of targeting SEQ ID NO:4 is selected from ISIS NO 400342,400343,400344 or 400345.
In certain embodiments, the target zone is the nucleotide 1738-1754 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 1738-1754 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 378,379,380 or 381.In some this embodiment, the short antisense compounds of the nucleotide 1738-1754 of targeting SEQ ID NO:4 is selected from ISIS NO 400346,400347,400348 or 400349.
In certain embodiments, the target zone is the nucleotide 1834-1853 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 1834-1853 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 382,383,384,385,386,387 or 388.In some this embodiment, the short antisense compounds of the nucleotide 1834-1853 of targeting SEQ IDNO:4 is selected from ISIS NO 400350,400351,400352,400353,400354,400355 or 400356.
In certain embodiments, the target zone is the nucleotide 2083-2099 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 2083-2099 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 389,390,391 or 392.In some this embodiment, the short antisense compounds of the nucleotide 2083-2099 of targeting SEQ ID NO:4 is selected from ISIS NO400357,400358,400359 or 400360.
In certain embodiments, the target zone is the nucleotide 2316-2338 of SEQ ID NO:4.In some this embodiment, the short antisense compounds of the nucleotide 2316-2338 of targeting SEQ ID NO:4 comprises the nucleotide sequence that is selected from SEQ ID NO 393,394,395,396,397,398,399,400,401 or 402.In some this embodiment, the short antisense compounds of the nucleotide 2316-2338 of targeting SEQ ID NO:4 is selected from ISIS NO 400361,400362,400363,400364,400365,400366,400367,400368,400369 or 400370.
In certain embodiments, its length of short antisense compounds of targeting PCSK9 nucleic acid is 8-16, preferred 9-15, more preferably 9-14, more preferably 10-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting PCSK9 nucleic acid is 9-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting PCSK9 nucleic acid is 10-14 nucleotide.In certain embodiments, this short antisense compounds is short antisense oligonucleotide.
In certain embodiments, the short antisense compounds of targeting PCSK9 nucleic acid is short gapmer.In some this embodiment, comprise at least one high-affinity in the short gapmer of targeting PCSK9 nucleic acid one or more pterions therein and modify.In certain embodiments, the short antisense compounds of targeting PCSK9 nucleic acid comprises 1-3 high-affinity modification in each pterion.In some this embodiment, the nucleoside in pterion or nucleotide comprise 2 ' and modify.In some this embodiment, the monomer in pterion is BNA.In some this embodiment, the monomer in pterion is selected from α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA, β-D-methylene oxygen base (4 '-CH2-O-2 ') BNA, ethyleneoxy group (4 '-(CH2)2-O-2 ') BNA, amino oxygen base (4 '-CH2-O-N (R)-2 ') BNA and oxygen base amino (4 '-CH2-N (R)-O-2 ') BNA.In certain embodiments, the monomer in pterion comprises in 2 ' position and is selected from following substituent group: pi-allyl, amino, azido, thio group, O-pi-allyl, O-C1-C10Alkyl ,-OCF3, O-(CH2)2-O-CH3, 2 '-O (CH2)2SCH3, O-(CH2)2-O-N (Rm) (Rn) and O-CH2-C (=O)-N (Rm) (Rn), each R whereinmAnd RnIndependent is H or substituted or unsubstituted C1-C10Alkyl.In certain embodiments, the monomer in pterion is 2 ' MOE nucleotide.
In certain embodiments, the short antisense compounds of targeting PCSK9 nucleic acid comprises between 5 ' pterion and 3 ' pterion at interval.In certain embodiments, comprise 5,6,7,8,9,10,11,12,13 or 14 monomers at interval.In certain embodiments, Jian Ge monomer is not modified deoxyribonucleotide.In certain embodiments, Jian Ge monomer is not modified ribonucleotide.In certain embodiments, modify (if any) at interval and cause producing such antisense compounds, when in conjunction with its target nucleic acids, this chemical compound can be supported the cutting of RNA enzyme (including but not limited to RNA enzyme H).
In certain embodiments, the short antisense compounds of targeting PCSK9 nucleic acid can have short antisense compounds characteristic or feature any or that multiple this paper summarized.In certain embodiments, the short antisense compounds of targeting PCSK9 nucleic acid has and is selected from following die body (pterion-deoxidation interval-pterion): 1-12-1,1-1-10-2,2-10-1-1,3-10-3,2-10-3,2-10-2,1-10-1,1-10-2,3-8-3,2-8-2,1-8-1,3-6-3 or 1-6-1, more preferably 1-10-1,2-10-2,3-10-3 and 1-9-2.
In certain embodiments, the short antisense compounds of targeting PCSK9 nucleic acid has the same Dan Julian key.In some this embodiment, these keys all are that thiophosphate connects key.In certain embodiments, Lian Jian is that di-phosphate ester connects key.In certain embodiments, the short antisense compounds of targeting PCSK9 nucleic acid has mixed matrix.
In certain embodiments, its length of short antisense compounds of targeting PCSK9 nucleic acid is 8 monomers.In certain embodiments, its length of short antisense compounds of targeting PCSK9 nucleic acid is 9 monomers.In certain embodiments, its length of short antisense compounds of targeting PCSK9 nucleic acid is 10 monomers.In certain embodiments, its length of short antisense compounds of targeting PCSK9 nucleic acid is 11 monomers.In certain embodiments, its length of short antisense compounds of targeting PCSK9 nucleic acid is 12 monomers.In certain embodiments, its length of short antisense compounds of targeting PCSK9 nucleic acid is 13 monomers.In certain embodiments, its length of short antisense compounds of targeting PCSK9 nucleic acid is 14 monomers.In certain embodiments, its length of short antisense compounds of targeting PCSK9 nucleic acid is 15 monomers.In certain embodiments, its length of short antisense compounds of targeting PCSK9 nucleic acid is 16 monomers.In certain embodiments, the short antisense compounds of targeting PCSK9 nucleic acid comprises 9-15 monomer.In certain embodiments, the short antisense compounds of targeting PCSK9 nucleic acid comprises 10-15 monomer.In certain embodiments, the short antisense compounds of targeting PCSK9 nucleic acid comprises 12-14 monomer.In certain embodiments, the short antisense compounds of targeting PCSK9 nucleic acid comprises 12-14 nucleotide or nucleoside.
In certain embodiments, the invention provides the method for the expression of regulating PCSK9.In certain embodiments, this method comprises the short antisense compounds that uses one or more targeting PCSK9 nucleic acid, and wherein the short antisense compounds of this targeting PCSK9 nucleic acid is about 8 to about 16, preferably 9-15, more preferably 9-14, more preferably 10-14 monomer (promptly about 8 monomer to about 16 connections).Those of ordinary skills will appreciate that, this comprises the method that the short antisense compounds that uses one or more 8,9,10,11,12,13,14,15 or 16 monomeric targeting PCSK9 nucleic acid is regulated the expression of PCSK9.
In certain embodiments, the method for adjusting PCSK9 comprises that using length is the short antisense compounds of 8 monomeric targeting PCSK9 nucleic acid.In certain embodiments, the method for adjusting PCSK9 comprises that using length is the short antisense compounds of 9 monomeric targeting PCSK9 nucleic acid.In certain embodiments, the method for adjusting PCSK9 comprises that using length is the short antisense compounds of 10 monomeric targeting PCSK9 nucleic acid.In certain embodiments, the method for adjusting PCSK9 comprises that using length is the short antisense compounds of 11 monomeric targeting PCSK9 nucleic acid.In certain embodiments, the method for adjusting PCSK9 comprises that using length is the short antisense compounds of 12 monomeric targeting PCSK9 nucleic acid.In certain embodiments, the method for adjusting PCSK9 comprises that using length is the short antisense compounds of 13 monomeric targeting PCSK9 nucleic acid.In certain embodiments, the method for adjusting PCSK9 comprises that using length is the short antisense compounds of 14 monomeric targeting PCSK9 nucleic acid.In certain embodiments, the method for adjusting PCSK9 comprises that using length is the short antisense compounds of 15 monomeric targeting PCSK9 nucleic acid.In certain embodiments, the method for adjusting PCSK9 comprises that using length is the short antisense compounds of 16 monomeric targeting PCSK9 nucleic acid.
In certain embodiments, the method for the expression of adjusting PCSK9 comprises that use comprises the short antisense compounds of 9-15 monomeric targeting PCSK9 nucleic acid.In certain embodiments, the method for the expression of adjusting PCSK9 comprises that use comprises the short antisense compounds of 10-15 monomeric targeting PCSK9 nucleic acid.In certain embodiments, the method for the expression of adjusting PCSK9 comprises that use comprises the short antisense compounds of 12-14 monomeric targeting PCSK9 nucleic acid.In certain embodiments, the method for the expression of adjusting PCSK9 comprises the short antisense compounds that uses the targeting PCSK9 nucleic acid that comprises 12-14 nucleotide or nucleoside.
4. superoxide dismutase 1 (SOD1)
Superoxide dismutase (SOD) can be by the catalysis superoxides to hydrogen peroxide (H2O2) disproportionation provide opposing to the oxidative damage of biomolecule (Fridovich, Annu.Rev.Biochem., 1995,64,97-112).Superoxide dismutase mainly contains two classes.One class is made up of one group of enzyme of the avtive spot with cupric and zinc, and another kind of avtive spot have manganese or ferrum (Fridovich, Annu.Rev.Biochem., 1995,64,97-112).
The sudden change in superoxide dismutase 1 gene and the amyotrophic lateral sclerosis of dominant inheritance's form (ALS also claims Lou Gehrig disease) are relevant, and the selectivity degeneration of the above lower motor neuron of this disease is feature (Cleveland and Liu, Nat.Med., 2000,6,1320-1321).Various sudden changes are likely that to the illeffects of superoxide dismutase 1 toxicity function rather than loss superoxide dismutase 1 activity mediate by promoting, can not cause obvious disease (Al-Chalabi and Leigh because neither can shorten the life-span when in mice, not having superoxide dismutase 1 fully yet, Curr.Opin.Neurol., 2000,13,397-405; Aliskyand Davidson, Hum.Gene Ther., 2000,11,2315-2329).
Identified 100 various mutations of people SOD1 gene, these sudden changes cause about 20% familial amyotrophic lateral sclerosis (ALS) case altogether.Some sudden changes (for example modal A4V sudden change of the U.S.) are highly lethal, only can survive 9 months from the disease symptoms outbreak.Other sudden changes of SOD1 show with slower disease process.
Definition
" SOD1 " means its expression and treats by lacking gene outcome or the protein that antisense compounds is regulated.
" SOD1 nucleic acid " means the nucleic acid of any coding SOD1.For example, in certain embodiments, SOD1 nucleic acid include but not limited to the to encode DNA sequence of SOD1, the RNA sequence of transcribing from the DNA of coding SOD1 and the mRNA sequence of coding SOD1.
" SOD1 mRNA " means the mRNA of coding SOD1.
SOD1 treats indication
Found that the Antisense Suppression to superoxide dismutase 1 (SOD1) can reduce SOD1 mRNA and protein simultaneously in the animal model of familial ALS, and further caused slowing down of progression of disease, the more important thing is that the time-to-live increases.Therefore, in certain embodiments, the invention provides by the short antisense compounds of targeting SOD1 nucleic acid being suffered from the individuality of familial ALS, the method for the progression of disease in the described individuality that slows down.In some this embodiment, the short antisense compounds of targeting SOD1 directly is delivered to the cerebrospinal fluid of individuality.In some this embodiment, described method also comprises the time-to-live that increases the individuality of suffering from familial ALS.Slowing down of progression of disease represented by the improvement of one or more indications of ALS progression of disease, and described indication includes but not limited to that modified ALS functional scale, pulmonary function test and muscle strength measure.
The SOD1 combination treatment
In certain embodiments, the pharmaceutical composition that one or more is comprised the short antisense compounds of targeting SOD1 nucleic acid gives altogether with one or more other medicament.In certain embodiments, described one or more other medicament be designed to its disease for the treatment of or disease identical with described one or more pharmaceutical compositions of the present invention.In certain embodiments, described one or more other medicament be designed to its disease for the treatment of or disease different with described one or more pharmaceutical compositions of the present invention.In certain embodiments, described one or more other medicament is designed to treat the ill effect of one or more pharmaceutical compositions of the present invention.In certain embodiments, one or more pharmaceutical compositions of the present invention are given altogether with another medicament, to treat the ill effect of this another medicament.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is given simultaneously.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is given at different time.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is prepared together in single dosage form.In certain embodiments, with other separately preparation of medicament of one or more pharmaceutical compositions of the present invention and one or more.
In certain embodiments, the medicament that gives altogether is a nicotinic acid.In some this embodiment, nicotinic acid is selected from rapid release nicotinic acid, extended release nicotinic acid and slow release nicotinic acid.
In certain embodiments, the medicament that gives altogether is a Carboxymethylcellulose.In some this embodiment, Carboxymethylcellulose is selected from gemfibrozil, fenofibrate, chlorine Bei Te, bezafibrate and ciprofibrate.
More examples of the medicament that can give altogether with the pharmaceutical composition of the short antisense compounds that comprises targeting SOD1 include but not limited to corticosteroid (including but not limited to prednisone); Immunoglobulin (includes but not limited to vein immunoglobulin (IVIg); Analgesic (for example acetaminophen); Antiinflammatory (including but not limited to NSAID (non-steroidal anti-inflammatory drug) (for example ibuprofen, COX-1 inhibitor and cox 2 inhibitor)); Salicylate; Antibiotic; Antiviral agent; Antifungal; Antidiabetic medicine (for example biguanide, glucosidase inhibitor, insulin, sulfonylureas and thiazolidinediones); The adrenergic modulation agent; Diuretic; Hormone (for example short anabolism steroid, androgen, estrogen, calcitonin, progesterone, somatostatin and thyroxin); Immunomodulator; Muscle relaxant; Hydryllin; Osteoporosis medicament (for example diphosphonate, calcitonin and estrogen); Prostaglandin; Antineoplastic agent; The spiritual healing medicament; Tranquilizer; Poison Oak Tree (oak) or black poison wood (sumac) product; Antibody and vaccine.
The short antisense compounds of some targeting SOD1 nucleic acid
In certain embodiments, lacking the antisense compounds targeting hasThe SOD1 nucleic acid of the sequence of searching number NM_X02317.1 (being incorporated herein) with SEQ ID NO:5.In some this embodiment, short antisense compounds and the SEQID NO:5 of targeting SEQ ID NO:5 have at least 90% complementarity.In some this embodiment, the short antisense compounds of targeting SEQ IDNO:5 and SEQ ID NO:5 have at least 95% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:5 of targeting SEQ ID NO:5 have 100% complementarity.In certain embodiments, the short antisense compounds of targeting SEQ ID NO:5 comprises the nucleotide sequence that is selected from the nucleotide sequence that provides in table 8 and 9.
The nucleotide sequence that each SEQ ID NO provides in the table 8 and 9 is independent of any to connecting the modification of key or nuclear base between sugar moieties, nucleoside.Thus, the defined short antisense compounds of certain SEQ ID NO can comprise one or more to connecting the modification of key or nuclear base between sugar moieties, nucleoside independently.Isis number (Isis NO.) described antisense compounds represented the nuclear base sequence with one or more to connecting key between sugar moieties, nucleoside or examining the combination of the modification of base.
Table 8 has been enumerated the example of the short antisense compounds of targeting SEQ ID NO:5.Table 8 has been enumerated the short antisense compounds that 100% complementarity is arranged with SEQ ID NO:5.The file that is marked with " gapmer die body " is represented the pterion of each short antisense compounds-at interval-pterion die body.Spacer segment comprises 2 '-deoxyribonucleotide, and each nucleotide of each pterion section comprises the sugar through 2 '-modification.The concrete sugar through 2 '-modification is also represented in " gapmer die body " file.For example, " 2-10-2 MOE " means 2-10-2 gapmer die body, and wherein the spacer segment both sides of 10 2 '-deoxyribonucleotides are connected to the pterion section of 2 nucleotide, and wherein the nucleotide of pterion section is 2 '-MOE nucleotide.Connecting key between nucleoside is thiophosphate.Short antisense compounds comprises the 5-methylcytidine that substitutes not modified cytosine, unless show " not modified cytosine " in the gapmer die body file, represented in this case cytosine is not modified cytosine.For example, " 5-mC is only in the interval " expression spacer segment has the 5-methylcytidine, and the pterion section has not modified cytosine.
In certain embodiments, the short antisense compounds of targeting SOD1 nucleic acid can have short antisense compounds characteristic or feature any or that multiple this paper summarized.In certain embodiments, the short antisense compounds of targeting SOD1 nucleic acid has and is selected from following die body (pterion-deoxidation interval-pterion): 1-12-1,1-1-10-2,2-10-1-1,3-10-3,2-10-3,2-10-2,1-10-1,1-10-2,3-8-3,2-8-2,1-8-1,3-6-3 or 1-6-1, more preferably 1-10-1,2-10-2,3-10-3 and 1-9-2.
Table 8: the short antisense compounds of targeting SEQ ID NO:5
ISIS NO.5 ' target site3 ' target siteSequence (5 '-3 ')The Gapmer die body SEQ ID NO
387541 85 100 GTCGCCCTTCAGCACG 3-10-3 MOE 406
387540 86 99 TCGCCCTTCAGCAC 2-10-2 MOE 407
387539 87 98 CGCCCTTCAGCA 1-10-1 MOE 408
In certain embodiments, the target zone is the nucleotide 85-100 of SEQ ID NO:5.In some this embodiment, the short antisense compounds of the nucleotide 85-100 of targeting SEQ ID NO:5 comprises and is selected from SEQ ID NO:406,407 or 408 nucleotide sequence.In some this embodiment, the short antisense compounds of the nucleotide 85-100 of targeting SEQ ID NO:5 is selected from Isis No.387541,387540 or 387539.
In certain embodiments, its length of short antisense compounds of targeting SOD1 nucleic acid is 8-16, preferred 9-15, more preferably 9-14, more preferably 10-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting SOD1 nucleic acid is 9-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting SOD1 nucleic acid is 10-14 nucleotide.In certain embodiments, this short antisense compounds is short antisense oligonucleotide.
In certain embodiments, the short antisense compounds of targeting SOD1 nucleic acid is short gapmer.In some this embodiment, comprise at least one high-affinity in the short gapmer of targeting SOD1 nucleic acid one or more pterions therein and modify.In certain embodiments, the short antisense compounds of targeting SOD1 nucleic acid comprises 1-3 high-affinity modification in each pterion.In some this embodiment, the nucleoside in pterion or nucleotide comprise 2 ' and modify.In some this embodiment, the monomer in pterion is BNA.In some this embodiment, the monomer in pterion is selected from α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA, β-D-methylene oxygen base (4 '-CH2-O-2 ') BNA, ethyleneoxy group (4 '-(CH2)2-O-2 ') BNA, amino oxygen base (4 '-CH2-O-N (R)-2 ') BNA and oxygen base amino (4 '-CH2-N (R)-O-2 ') BNA.In certain embodiments, the monomer in pterion comprises in 2 ' position and is selected from following substituent group: pi-allyl, amino, azido, thio group, O-pi-allyl, O-C1-C10Alkyl ,-OCF3, O-(CH2)2-O-CH3, 2 '-O (CH2)2SCH3, O-(CH2)2-O-N (Rm) (Rn) and O-CH2-C (=O)-N (Rm) (Rn), each R whereinmAnd RnIndependent is H or substituted or unsubstituted C1-C10Alkyl.In certain embodiments, the monomer in pterion is 2 ' MOE nucleotide.
In certain embodiments, the short antisense compounds of targeting SOD1 nucleic acid comprises between 5 ' pterion and 3 ' pterion at interval.In certain embodiments, comprise 5,6,7,8,9,10,11,12,13 or 14 monomers at interval.In certain embodiments, Jian Ge monomer is not modified deoxyribonucleotide.In certain embodiments, Jian Ge monomer is not modified ribonucleotide.In certain embodiments, modify (if any) at interval and cause producing such antisense compounds, when in conjunction with its target nucleic acids, this chemical compound can be supported the cutting of RNA enzyme (including but not limited to RNA enzyme H).
In certain embodiments, the short antisense compounds of targeting SOD1 nucleic acid has the same Dan Julian key.In some this embodiment, these keys all are that thiophosphate connects key.In certain embodiments, Lian Jian is that di-phosphate ester connects key.In certain embodiments, the short antisense compounds of targeting SOD1 nucleic acid has mixed matrix.
In certain embodiments, its length of short antisense compounds of targeting SOD1 nucleic acid is 8 monomers.In certain embodiments, its length of short antisense compounds of targeting SOD1 nucleic acid is 9 monomers.In certain embodiments, its length of short antisense compounds of targeting SOD1 nucleic acid is 10 monomers.In certain embodiments, its length of short antisense compounds of targeting SOD1 nucleic acid is 11 monomers.In certain embodiments, its length of short antisense compounds of targeting SOD1 nucleic acid is 12 monomers.In certain embodiments, its length of short antisense compounds of targeting SOD1 nucleic acid is 13 monomers.In certain embodiments, its length of short antisense compounds of targeting SOD1 nucleic acid is 14 monomers.In certain embodiments, its length of short antisense compounds of targeting SOD1 nucleic acid is 15 monomers.In certain embodiments, its length of short antisense compounds of targeting SOD1 nucleic acid is 16 monomers.In certain embodiments, the short antisense compounds of targeting SOD1 nucleic acid comprises 9-15 monomer.In certain embodiments, the short antisense compounds of targeting SOD1 nucleic acid comprises 10-15 monomer.In certain embodiments, the short antisense compounds of targeting SOD1 nucleic acid comprises 12-14 monomer.In certain embodiments, the short antisense compounds of targeting SOD1 nucleic acid comprises 12-14 nucleotide or nucleoside.
In certain embodiments, the invention provides the method for the expression of regulating SOD1.In certain embodiments, this method comprises the short antisense compounds that uses one or more targeting SOD1 nucleic acid, and wherein the short antisense compounds of this targeting SOD1 nucleic acid is about 8 to about 16, preferably 9-15, more preferably 9-14, more preferably 10-14 monomer (promptly about 8 monomer to about 16 connections).Those of ordinary skills will appreciate that, this comprises the method that the short antisense compounds that uses one or more 8,9,10,11,12,13,14,15 or 16 monomeric targeting SOD1 nucleic acid is regulated the expression of SOD1.
In certain embodiments, the method for adjusting SOD1 comprises that using length is the short antisense compounds of 8 monomeric targeting SOD1 nucleic acid.In certain embodiments, the method for adjusting SOD1 comprises that using length is the short antisense compounds of 9 monomeric targeting SOD1 nucleic acid.In certain embodiments, the method for adjusting SOD1 comprises that using length is the short antisense compounds of 10 monomeric targeting SOD1 nucleic acid.In certain embodiments, the method for adjusting SOD1 comprises that using length is the short antisense compounds of 11 monomeric targeting SOD1 nucleic acid.In certain embodiments, the method for adjusting SOD1 comprises that using length is the short antisense compounds of 12 monomeric targeting SOD1 nucleic acid.In certain embodiments, the method for adjusting SOD1 comprises that using length is the short antisense compounds of 13 monomeric targeting SOD1 nucleic acid.In certain embodiments, the method for adjusting SOD1 comprises that using length is the short antisense compounds of 14 monomeric targeting SOD1 nucleic acid.In certain embodiments, the method for adjusting SOD1 comprises that using length is the short antisense compounds of 15 monomeric targeting SOD1 nucleic acid.In certain embodiments, the method for adjusting SOD1 comprises that using length is the short antisense compounds of 16 monomeric targeting SOD1 nucleic acid.
In certain embodiments, the method for the expression of adjusting SOD1 comprises that use comprises the short antisense compounds of 9-15 monomeric targeting SOD1 nucleic acid.In certain embodiments, the method for the expression of adjusting SOD1 comprises that use comprises the short antisense compounds of 10-15 monomeric targeting SOD1 nucleic acid.In certain embodiments, the method for the expression of adjusting SOD1 comprises that use comprises the short antisense compounds of 12-14 monomeric targeting SOD1 nucleic acid.In certain embodiments, the method for the expression of adjusting SOD1 comprises the short antisense compounds that uses the targeting SOD1 nucleic acid that comprises 12-14 nucleotide or nucleoside.
5.CRP
CRP (also claiming c-proteins C reactive and PTX1) is the multiple inflammatory cytokine of response and essential people's acute phase reactant of producing in liver.This protein of identifying as far back as nineteen thirty is high conservative, it is believed that it is the early stage indication of infectiousness or inflammatory disease.Plasma C RP level can respond infection, ischemia, wound, burn and inflammatory disease and increase by 1,000 times.In the patient accepts clinical trial that lipid reduces therapy (as the inhibin therapy), prove, the patient that LDL-C and CRP all reduce with only have LDL-C to reduce the patient to compare the risk mitigation of future development coronary event.
Definition
" CRP " means its expression and treats by lacking gene outcome or the protein that antisense compounds is regulated.
" CRP nucleic acid " means the nucleic acid of any coding CRP.For example, in certain embodiments, CRP nucleic acid include but not limited to the to encode DNA sequence of CRP, the RNA sequence of transcribing from the DNA of coding CRP and the mRNA of coding CRP.
" CRP mRNA " means the mRNA of coding CRP.
CRP treats indication
In certain embodiments, the invention provides the method for the CRP expression of regulating in the individuality, described method comprises that the short antisense compounds with targeting CRP nucleic acid gives this individuality.In certain embodiments, the invention provides the individual method of treatment, described method comprises and gives the pharmaceutical composition that one or more comprise the short antisense compounds of targeting CRP nucleic acid.In certain embodiments, this individuality suffers from hypercholesterolemia, non-familial hypercholesterolemia, familial hypercholesterolemia, heterozygous familial hypercholesterolemia, the familial hypercholesterolemia that isozygotys, Combination dyslipidemia, atherosclerosis, the atherosclerotic risk of development, coronary heart disease, coronary disease medical history, early show effect coronary heart disease, one or more coronary heart disease risk factors.In certain embodiments, this individuality suffers from acute coronary syndrome, blood vessel injury, arterial occlusion, unstable angina pectoris, back (post) peripheral blood vessel, back myocardial infarction (MI), thrombosis, deep venous thrombosis, end-stage renal disease (ESRD), chronic renal failure, complement activation, congestive heart failure or systemic vasculitis.In certain embodiments, this individuality suffers from apoplexy.
In certain embodiments, this individuality has carried out being selected from the operation of the implantation of optional (elective) support, angioplasty, back Percutaneous Transluminal Angioplasty (PTCA), heart transplantation, kidney dialysis or cardiopulmonary bypass.
In certain embodiments, this individuality suffers from inflammatory diseases.In some this embodiment, inflammatory diseases is selected from inflammatory bowel, ulcerative colitis, rheumatoid arthritis or osteoarthritis.
The guilding principle that lipid reduces therapy by u.s. national cholesterol education program (NCEP) adult treatment expert scheme III (ATPIII) in calendar year 2001 set up and upgraded in 2004 (Grundyet al., Circulation, 2004,110,227-239).This guilding principle comprises acquisition complete lipoprotein general picture (profile) after fasting in 9-12 hour usually, to determine LDL-C, T-CHOL and HDL-C level.According to the guilding principle of up-to-date formulation, 130-159mg/dL, 160-189mg/dL and think critical height, height and high level respectively more than or equal to the LDL-C level of 190mg/dL.200-239mg/dL and think critical height and high level respectively more than or equal to the total cholesterol level of 240mg/dL.HDL-C level less than 40mg/dL is thought low-level.
In certain embodiments, this individuality has been confirmed as carrying out lipid reduction therapy.In some this embodiment, according to upgrading (Grundyet al. in calendar year 2001 foundation and in 2004 by u.s. national cholesterol education program (NCEP) adult treatment expert scheme III (ATPIII), Circulation, 2004,110, guilding principle 227-239), this individuality have been confirmed as carrying out lipid and have reduced therapy.In certain embodiments, need carry out its LDL-C of this individuality that lipid reduces therapy and be higher than 190mg/dL.In certain embodiments, need carry out its LDL-C of this individuality that lipid reduces therapy and be higher than 160mg/dL.In certain embodiments, need carry out its LDL-C of this individuality that lipid reduces therapy and be higher than 130mg/dL.In certain embodiments, need carry out its LDL-C of this individuality that lipid reduces therapy and be higher than 100mg/dL.In some this embodiment, this individuality that need carry out lipid reduction therapy should keep LDL-C to be lower than 160mg/dL.In some this embodiment, this individuality that need carry out lipid reduction therapy should keep LDL-C to be lower than 130mg/dL.In some this embodiment, this individuality that need carry out lipid reduction therapy should keep LDL-C to be lower than 100mg/dL.In some this embodiment, this individuality should keep LDL-C to be lower than 70mg/dL.
In certain embodiments, the invention provides the method that reduces the CRP in the individuality.In some this embodiment, CRP is reduced at least 10%, at least 15%, at least 20%, at least 25%, at least 30%, at least 35%, at least 40%, at least 45%, at least 50%, at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95% and at least 100%.
In certain embodiments, method provided by the invention does not reduce HDL-C.In certain embodiments, method provided by the invention does not cause the accumulation of lipid in liver.In certain embodiments, method provided by the invention does not cause fatty degeneration of liver.
In certain embodiments, can reduce again and the method for the treatment of relevant side effect when the invention provides CRP concentration in reducing the experimenter.In some this embodiment, side effect is a liver toxicity.In some this embodiment, side effect is an abnormal liver function.In some this embodiment, side effect is that alanine aminotransferase (ALT) raises.In some this embodiment, side effect is that aspartate aminotransferase (AST) raises.
In certain embodiments, the invention provides the method that reduces the CRP concentration among the experimenter not have to reach target LDL-C level because of lipid reduction therapy.In some this embodiment, the short antisense compounds of targeting CRP nucleic acid is that the unique lipid that gives the experimenter reduces medicament.In some this embodiment, experimenter's lipid that acceptance (comply with) recommended of not following the doctor's advice as yet reduces therapy.In some this embodiment, pharmaceutical composition of the present invention reduces therapy with in addition different lipid and gives altogether together.In some this embodiment, it is the LDL-Apheresis that other lipid reduces therapy.In some this embodiment, it is inhibin that other lipid reduces therapy.In some this embodiment, it is according to Ezetimibe that other lipid reduces therapy.
In certain embodiments, the invention provides the method for the CRP concentration among the experimenter that reduction do not tolerate inhibin.In some this embodiment, because given inhibin, experimenter's creatine kinase concentration improves.In some this embodiment, because given inhibin, experimenter's abnormal liver function.In some this embodiment, because given inhibin, experimenter's myalgia.In some this embodiment, because given inhibin, the side effect of experimenter's center of origin nervous system.In certain embodiments, experimenter's inhibin of accepting to be recommended of not following the doctor's advice as yet gives.
In certain embodiments, the invention provides the method that reduces the coronary heart disease risk among the experimenter.In certain embodiments, the invention provides the method for the atherosclerotic progress among the experimenter that slows down.In some this embodiment, the invention provides the method that stops the atherosclerotic progress among the experimenter.In some this embodiment, the invention provides the size of the atherosclerotic plaque that reduces among the experimenter and/or the method for diffusion.In certain embodiments, the method that is provided can reduce the experimenter and develop atherosclerotic risk.
In certain embodiments, the method that is provided can be improved the cardiovascular consequence among the experimenter.In some this embodiment, the improvement of cardiovascular consequence is that the risk of development coronary heart disease reduces.In some this embodiment, the improvement of cardiovascular consequence is the reduction of the incidence rate of one or more main cardiovascular events, and described incident includes but not limited to death, myocardial infarction, infraction, apoplexy, cardiogenic shock, pulmonary edema, cardiac arrest and atrial arrhythmia again.In some this embodiment, the improvement of cardiovascular consequence is confirmed by the improvement of carotid intimal medial thickness.In some this embodiment, the improvement of carotid intimal medial thickness is the reduction of thickness.In some this embodiment, the improvement of carotid intimal medial thickness is preventing of media thickness increase.
In certain embodiments, the pharmaceutical composition that comprises the short antisense compounds of targeting CRP nucleic acid is for using in treatment.In certain embodiments, described treatment is the reduction of the CRP in the individuality.In certain embodiments, described treatment is to following treatment of diseases: hypercholesterolemia, non-familial hypercholesterolemia, familial hypercholesterolemia, heterozygous familial hypercholesterolemia, the familial hypercholesterolemia that isozygotys, Combination dyslipidemia, atherosclerosis, the atherosclerotic risk of development, coronary heart disease, coronary disease medical history or the coronary heart disease of early showing effect.In certain embodiments, described treatment is the reduction of CRP risk.In certain embodiments, described treatment is atherosclerotic prevention.In certain embodiments, described treatment is the prevention of coronary heart disease.In certain embodiments, described treatment is to following treatment of diseases: acute coronary syndrome, chronic renal failure, blood vessel injury, arterial occlusion, atherosclerosis thrombosis, unstable angina pectoris, back (post) peripheral blood vessel, back myocardial infarction (MI), thrombosis, deep venous thrombosis, end-stage renal disease (ESRD), complement activation, congestive heart failure or systemic vasculitis.In certain embodiments, described treatment is to having carried out being selected from the implantation of optional (elective) support, angioplasty, the treatment of the individuality of the operation of Percutaneous Transluminal Angioplasty (PTCA), heart transplantation, kidney dialysis or cardiopulmonary bypass afterwards.In certain embodiments, described treatment is the treatment to inflammatory diseases.
In certain embodiments, the pharmaceutical composition that will comprise the short antisense compounds of targeting CRP nucleic acid is used for preparing the medicine in order to the CRP that reduces individuality.In certain embodiments, the pharmaceutical composition that will comprise the short antisense compounds of targeting CRP nucleic acid is used to prepare in order to reduce the medicine of coronary heart disease risk.In certain embodiments, the short antisense compounds with targeting CRP nucleic acid is used to prepare in order to treat the medicine of following disease: hypercholesterolemia, non-familial hypercholesterolemia, familial hypercholesterolemia, heterozygous familial hypercholesterolemia, the familial hypercholesterolemia that isozygotys, Combination dyslipidemia, atherosclerosis, the atherosclerotic risk of development, coronary heart disease, coronary disease medical history, early show effect coronary heart disease or one or more coronary heart disease risk factors.
In certain embodiments, the short antisense compounds with targeting CRP nucleic acid is used to prepare in order to treat the medicine of following disease: acute coronary syndrome, chronic renal failure, blood vessel injury, arterial occlusion, atherosclerosis thrombosis, unstable angina pectoris, back (post) peripheral blood vessel, back myocardial infarction (MI), thrombosis, deep venous thrombosis, end-stage renal disease (ESRD), complement activation, congestive heart failure or systemic vasculitis.In certain embodiments, the short antisense compounds with targeting CRP nucleic acid is used to prepare the medicine of suffering from the individuality of apoplexy in order to treatment.
In certain embodiments, the short antisense compounds of targeting CRP nucleic acid is used for preparation has carried out being selected from the operation of the implantation of optional (elective) support, angioplasty, back Percutaneous Transluminal Angioplasty (PTCA), heart transplantation, kidney dialysis or cardiopulmonary bypass in order to treatment the medicine of individuality.
In certain embodiments, the short antisense compounds with targeting CRP nucleic acid is used to prepare in order to treat the medicine of inflammatory diseases.In certain embodiments, the short antisense compounds with targeting CRP nucleic acid is used to prepare in order to treat the medicine of inflammatory bowel, ulcerative colitis, rheumatoid arthritis or osteoarthritis.
The CRP combination treatment
In certain embodiments, the pharmaceutical composition that one or more is comprised the short antisense compounds of targeting CRP nucleic acid gives altogether with one or more other medicament.In certain embodiments, described one or more other medicament is that lipid reduces medicament.In certain embodiments, described one or more other medicament be designed to its disease for the treatment of or disease identical with described one or more pharmaceutical compositions of the present invention.In certain embodiments, described one or more other medicament be designed to its disease for the treatment of or disease different with described one or more pharmaceutical compositions of the present invention.In certain embodiments, described one or more other medicament is designed to treat the ill effect of one or more pharmaceutical compositions of the present invention.In certain embodiments, one or more pharmaceutical compositions of the present invention are given altogether with another medicament, to treat the ill effect of this another medicament.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is given simultaneously.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is given at different time.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is prepared together in single dosage form.In certain embodiments, with other separately preparation of medicament of one or more pharmaceutical compositions of the present invention and one or more.
In certain embodiments, the medicament that can give altogether with the pharmaceutical composition of the short antisense compounds that comprises targeting CRP nucleic acid comprises that lipid reduces medicament.In some this embodiment, can include but not limited to atorvastatin, simvastatin, rosuvastatin with the medicament that pharmaceutical composition of the present invention gives altogether and according to Ezetimibe.In some this embodiment, lipid is reduced medicament give before the pharmaceutical composition of the present invention giving.In some this embodiment, lipid is reduced medicament after giving pharmaceutical composition of the present invention, give.In some this embodiment, lipid is reduced medicament when giving pharmaceutical composition of the present invention, give.In some this embodiment, the dosage that the lipid that gives altogether reduces medicament is identical with the dosage that gives separately to be given when lipid reduces medicament.In some this embodiment, the dosage that the lipid that gives altogether reduces medicament is lower than the dosage that is given when giving lipid reduction medicament separately.In some this embodiment, the dosage that the lipid that gives altogether reduces medicament is higher than the dosage that is given when giving lipid reduction medicament separately.
In certain embodiments, it is the HMG-CoA reductase inhibitor that the lipid that gives altogether reduces medicament.In some this embodiment, the HMG-CoA reductase inhibitor is an inhibin.In some this embodiment, inhibin is selected from atorvastatin, simvastatin, pravastatin, fluvastatin and rosuvastatin.
In certain embodiments, it is ISIS 301012 that the lipid that gives altogether reduces medicament.
In certain embodiments, it is cholesterol absorption inhibitor that the lipid that gives altogether reduces medicament.In some this embodiment, cholesterol absorption inhibitor is according to Ezetimibe.
In certain embodiments, it is HMG-CoA reductase inhibitor and cholesterol absorption inhibitor formulated together altogether that the lipid that gives altogether reduces medicament.In some this embodiment, it is according to Ezetimibe/simvastatin that lipid formulated together altogether reduces medicament.
In certain embodiments, it is microsomal triglyceride transfer protein inhibitor (MTP inhibitor) that the lipid that gives altogether reduces medicament.
In certain embodiments, the medicament that gives altogether is a bile acid chelating agent.In some this embodiment, bile acid chelating agent is selected from colestyramine, colestipol and colesevelam.
In certain embodiments, the medicament that gives altogether is a nicotinic acid.In some this embodiment, nicotinic acid is selected from rapid release nicotinic acid, extended release nicotinic acid and slow release nicotinic acid.
In certain embodiments, the medicament that gives altogether is a Carboxymethylcellulose.In some this embodiment, Carboxymethylcellulose is selected from gemfibrozil, fenofibrate, chlorine Bei Te, bezafibrate and ciprofibrate.
More examples of the medicament that can give altogether with the pharmaceutical composition of the short antisense compounds that comprises targeting CRP nucleic acid include but not limited to corticosteroid (including but not limited to prednisone); Immunoglobulin (includes but not limited to vein immunoglobulin (IVIg); Analgesic (for example acetaminophen); Antiinflammatory (including but not limited to NSAID (non-steroidal anti-inflammatory drug) (for example ibuprofen, COX-1 inhibitor and cox 2 inhibitor)); Salicylate; Antibiotic; Antiviral agent; Antifungal; Antidiabetic medicine (for example biguanide, glucosidase inhibitor, insulin, sulfonylureas and thiazolidinediones); The adrenergic modulation agent; Diuretic; Hormone (for example short anabolism steroid, androgen, estrogen, calcitonin, progesterone, somatostatin and thyroxin); Immunomodulator; Muscle relaxant; Hydryllin; Osteoporosis medicament (for example diphosphonate, calcitonin and estrogen); Prostaglandin; Antineoplastic agent; The spiritual healing medicament; Tranquilizer; Poison Oak Tree (oak) or black poison wood (sumac) product; Antibody and vaccine.
In certain embodiments, the pharmaceutical composition that comprises the short antisense compounds of targeting CRP nucleic acid can be reduced therapy in conjunction with lipid gives.In some this embodiment, it is that curative life style changes that lipid reduces therapy.In some this embodiment, it is the LDL Apheresis that lipid reduces therapy.
The short antisense compounds of some targeting CRP nucleic acid
In certain embodiments, lacking the antisense compounds targeting hasThe CRP nucleic acid of the sequence of searching number NM_000567.1 (being incorporated herein) with SEQ ID NO:6.In some this embodiment, short antisense compounds and the SEQ IDNO:6 of targeting SEQ ID NO:6 have at least 90% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:6 of targeting SEQ ID NO:6 have at least 95% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:6 of targeting SEQ ID NO:6 have 100% complementarity.In certain embodiments, the short antisense compounds of targeting SEQ ID NO:6 comprises the nucleotide sequence that is selected from the nucleotide sequence that provides in the table 9.
The nucleotide sequence that each SEQ ID NO provides in the table 9 is independent of any to connecting the modification of key or nuclear base between sugar moieties, nucleoside.Thus, the defined short antisense compounds of certain SEQ ID NO can comprise one or more to connecting the modification of key or nuclear base between sugar moieties, nucleoside independently.Isis number (Isis NO.) described antisense compounds represented the nuclear base sequence with one or more to connecting key between sugar moieties, nucleoside or examining the combination of the modification of base.
Table 9 has been enumerated the example of the short antisense compounds of targeting SEQ ID NO:6.Table 9 has been enumerated the short antisense compounds that 100% complementarity is arranged with SEQ ID NO:6.The file that is marked with " gapmer die body " is represented the pterion of each short antisense compounds-at interval-pterion die body.Spacer segment comprises 2 '-deoxyribonucleotide, and each nucleotide of each pterion section comprises the sugar through 2 '-modification.The concrete sugar through 2 '-modification is also represented in " gapmer die body " file.For example, " 2-10-2 MOE " means 2-10-2 gapmer die body, and wherein the spacer segment both sides of 10 2 '-deoxyribonucleotides are connected to the pterion section of 2 nucleotide, and wherein the nucleotide of pterion section is 2 '-MOE nucleotide.Connecting key between nucleoside is thiophosphate.Short antisense compounds comprises the 5-methylcytidine that substitutes not modified cytosine, unless show " not modified cytosine " in the gapmer die body file, represented in this case cytosine is not modified cytosine.For example, " 5-mC is only in the interval " expression spacer segment has the 5-methylcytidine, and the pterion section has not modified cytosine.
In certain embodiments, the short antisense compounds of targeting CRP nucleic acid can have short antisense compounds characteristic or feature any or that multiple this paper summarized.In certain embodiments, the short antisense compounds of targeting CRP nucleic acid has and is selected from following die body (pterion-deoxidation interval-pterion): 1-12-1,1-1-10-2,2-10-1-1,3-10-3,2-10-3,2-10-2,1-10-1,1-10-2,3-8-3,2-8-2,1-8-1,3-6-3 or 1-6-1, more preferably 1-10-1,2-10-2,3-10-3 and 1-9-2.
Table 9: the short antisense compounds of targeting SEQ ID NO:6
ISIS NO.5 ' target site3 ' target siteSequence (5 '-3 ')The Gapmer die body Seq ID NO
353506 1257 1272 ACTCTGGACCCAAACC 3-10-3 MOE 409
353507 1258 1271 CTCTGGACCCAAAC 2-10-2 MOE 410
353484 1305 1320 CCATTTCAGGAGACCT 3-10-3 MOE 411
353485 1306 1319 CATTTCAGGAGACC 2-10-2 MOE 412
In certain embodiments, the target zone is the nucleotide 1305-1320 of NM_000567.1.In some this embodiment, the short antisense compounds of the nucleotide 1305-1320 of targeting NM_000567.1 comprises the nucleotide sequence that is selected from SEQ ID NO:1305 or 1306.In some this embodiment, the short antisense compounds of the nucleotide 263-278 of targeting NM_000567.1 is selected from Isis NO.353484 or 353485.
In certain embodiments, the target zone is the nucleotide 1257-1272 of NM_000567.1.In some this embodiment, the short antisense compounds of the nucleotide 1257-1272 of targeting NM_000567.1 comprises the nucleotide sequence that is selected from SEQ ID NO 1257 or 1258.In some this embodiment, the short antisense compounds of the nucleotide 428-483 of targeting NM_000567.1 is selected from Isis NO.353506 or 353507.
In certain embodiments, its length of short antisense compounds of targeting CRP nucleic acid is 8-16, preferred 9-15, more preferably 9-14, more preferably 10-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting CRP nucleic acid is 9-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting CRP nucleic acid is 10-14 nucleotide.In certain embodiments, this short antisense compounds is short antisense oligonucleotide.
In certain embodiments, the short antisense compounds of targeting CRP nucleic acid is short gapmer.In some this embodiment, comprise at least one high-affinity in the short gapmer of targeting CRP nucleic acid one or more pterions therein and modify.In certain embodiments, the short antisense compounds of targeting CRP nucleic acid comprises 1-3 high-affinity modification in each pterion.In some this embodiment, the nucleoside in pterion or nucleotide comprise 2 ' and modify.In some this embodiment, the monomer in pterion is BNA.In some this embodiment, the monomer in pterion is selected from α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA, β-D-methylene oxygen base (4 '-CH2-O-2 ') BNA, ethyleneoxy group (4 '-(CH2)2-O-2 ') BNA, amino oxygen base (4 '-CH2-O-N (R)-2 ') BNA and oxygen base amino (4 '-CH2-N (R)-O-2 ') BNA.In certain embodiments, the monomer in pterion comprises in 2 ' position and is selected from following substituent group: pi-allyl, amino, azido, thio group, O-pi-allyl, O-C1-C10Alkyl ,-OCF3, O-(CH2)2-O-CH3, 2 '-O (CH2)2SCH3, O-(CH2)2-O-N (Rm) (Rn) and O-CH2-C (=O)-N (Rm) (Rn), each R whereinmAnd RnIndependent is H or substituted or unsubstituted C1-C10Alkyl.In certain embodiments, the monomer in pterion is 2 ' MOE nucleotide.
In certain embodiments, the short antisense compounds of targeting CRP nucleic acid comprises between 5 ' pterion and 3 ' pterion at interval.In certain embodiments, comprise 5,6,7,8,9,10,11,12,13 or 14 monomers at interval.In certain embodiments, Jian Ge monomer is not modified deoxyribonucleotide.In certain embodiments, Jian Ge monomer is not modified ribonucleotide.In certain embodiments, modify (if any) at interval and cause producing such antisense compounds, when in conjunction with its target nucleic acids, this chemical compound can be supported the cutting of RNA enzyme (including but not limited to RNA enzyme H).
In certain embodiments, the short antisense compounds of targeting CRP nucleic acid has the same Dan Julian key.In some this embodiment, these keys all are that thiophosphate connects key.In certain embodiments, Lian Jian is that di-phosphate ester connects key.In certain embodiments, the short antisense compounds of targeting CRP nucleic acid has mixed matrix.
In certain embodiments, its length of short antisense compounds of targeting CRP nucleic acid is 8 monomers.In certain embodiments, its length of short antisense compounds of targeting CRP nucleic acid is 9 monomers.In certain embodiments, its length of short antisense compounds of targeting CRP nucleic acid is 10 monomers.In certain embodiments, its length of short antisense compounds of targeting CRP nucleic acid is 11 monomers.In certain embodiments, its length of short antisense compounds of targeting CRP nucleic acid is 12 monomers.In certain embodiments, its length of short antisense compounds of targeting CRP nucleic acid is 13 monomers.In certain embodiments, its length of short antisense compounds of targeting CRP nucleic acid is 14 monomers.In certain embodiments, its length of short antisense compounds of targeting CRP nucleic acid is 15 monomers.In certain embodiments, its length of short antisense compounds of targeting CRP nucleic acid is 16 monomers.In certain embodiments, the short antisense compounds of targeting CRP nucleic acid comprises 9-15 monomer.In certain embodiments, the short antisense compounds of targeting CRP nucleic acid comprises 10-15 monomer.In certain embodiments, the short antisense compounds of targeting CRP nucleic acid comprises 12-14 monomer.In certain embodiments, the short antisense compounds of targeting CRP nucleic acid comprises 12-14 nucleotide or nucleoside.
In certain embodiments, the invention provides the method for the expression of regulating CRP.In certain embodiments, this method comprises the short antisense compounds that uses one or more targeting CRP nucleic acid, and wherein the short antisense compounds of this targeting CRP nucleic acid is about 8 to about 16, preferably 9-15, more preferably 9-14, more preferably 10-14 monomer (promptly about 8 monomer to about 16 connections).Those of ordinary skills will appreciate that, this comprises the method that the short antisense compounds that uses one or more 8,9,10,11,12,13,14,15 or 16 monomeric targeting CRP nucleic acid is regulated the expression of CRP.
In certain embodiments, the method for adjusting CRP comprises that using length is the short antisense compounds of 8 monomeric targeting CRP nucleic acid.In certain embodiments, the method for adjusting CRP comprises that using length is the short antisense compounds of 9 monomeric targeting CRP nucleic acid.In certain embodiments, the method for adjusting CRP comprises that using length is the short antisense compounds of 10 monomeric targeting CRP nucleic acid.In certain embodiments, the method for adjusting CRP comprises that using length is the short antisense compounds of 11 monomeric targeting CRP nucleic acid.In certain embodiments, the method for adjusting CRP comprises that using length is the short antisense compounds of 12 monomeric targeting CRP nucleic acid.In certain embodiments, the method for adjusting CRP comprises that using length is the short antisense compounds of 13 monomeric targeting CRP nucleic acid.In certain embodiments, the method for adjusting CRP comprises that using length is the short antisense compounds of 14 monomeric targeting CRP nucleic acid.In certain embodiments, the method for adjusting CRP comprises that using length is the short antisense compounds of 15 monomeric targeting CRP nucleic acid.In certain embodiments, the method for adjusting CRP comprises that using length is the short antisense compounds of 16 monomeric targeting CRP nucleic acid.
In certain embodiments, the method for the expression of adjusting CRP comprises that use comprises the short antisense compounds of 9-15 monomeric targeting CRP nucleic acid.In certain embodiments, the method for the expression of adjusting CRP comprises that use comprises the short antisense compounds of 10-15 monomeric targeting CRP nucleic acid.In certain embodiments, the method for the expression of adjusting CRP comprises that use comprises the short antisense compounds of 12-14 monomeric targeting CRP nucleic acid.In certain embodiments, the method for the expression of adjusting CRP comprises the short antisense compounds that uses the targeting CRP nucleic acid that comprises 12-14 nucleotide or nucleoside.
6. glycocorticosteroid receptor (GCCR)
Glucocorticoid is to obtain one of steroid hormone of identifying the earliest, be responsible for different physiological roles, including but not limited to the synthetic inhibition of inhibition, cytokine of the sedimentary increase of reduction, glycogen, immunity and the inflammatory reaction of glucose uptake and utilization in the stimulation, surrounding tissue of glyconeogenesis and the acceleration of various growth incidents.Glucocorticoid for resist stress particular importance also.The rising synthetic and that discharge of the glucocorticoid of stress-induced can cause various replying, comprise the increase that increase, the inhibition of inflammatory mediator, the synthetic inhibition of cytokine and the glucose of ventricle workload produce (Karin, Cell, 1998,93,487-490).
Natural glucocorticoid and their synthesis of derivatives all are to apply its effect by glycocorticosteroid receptor, and this receptor is the omnipresence express cell matter member of the nuclear hormone superfamily of receptor.People's glycocorticosteroid receptor also claims nuclear receptor superfamily 3, group C, and the member 1; NR3C1; GCCR; GCR; GRL; Glycocorticosteroid receptor, lymphocyte.Its gene is positioned on the human chromosome 5q11-q13, forms (Encio andDetera-Wadleigh, J Biol Chem, 1991,266,7182-7188 by 9 exons; Gehring et al., Proc Natl Acad Sci USA, 1985,82,3751-3755).Exist people's glycocorticosteroid receptor mRNA of various ways: the 5.5kb people's glycocorticosteroid receptor α cDNA that contains exons 1-8 and exon 9 α; The 4.3kb people's glycocorticosteroid receptor β cDNA that contains exons 1-8 and exon 9 β; With the 7.0kb people's glycocorticosteroid receptor α cDNA that contains exons 1-8 and whole exon 9, it comprises exon 9 α, exon 9 β and " J district ", and " J district " flank is exon 9 α and 9 β (Hollenberg et al., Nature, 1985,318,635-641; Oakley et al., J Biol Chem, 1996,271,9550-9559).People's glycocorticosteroid receptor α is the main isotype of receptor, be show steroid in conjunction with active isotype (Hollenberg et al., Nature, 1985,318,635-641).In addition, by using three different promoteres, can transcribe out three different exons 1 variants, the alternately montage of an exons 1 variant can cause producing three different editions of this exon.Therefore, people's glycocorticosteroid receptor mRNA can contain 5 different editions exons 1 (Breslin et al., MolEndocrinol, 2001,15,1381-1395).
Research to the expression pattern of the α of people's glycocorticosteroid receptor mRNA and β isotype discloses, and the expression of α isotype is horn of plenty more.Two kinds of isotypes comprise lung, kidney, heart, liver, skeletal muscle, macrophage, neutrophil cell and peripheral blood lymphocytes all similarly expressing in tissue and the cell type.Only there is people's glycocorticosteroid receptor α in colon, to express.On protein level, be subjected to all to detect the α isotype in the inspection tissue at all, and the β isotype can not detect, this prompting is under physiological condition, the montage approach of acquiescence is approach α isotype (Pujols et al., Am J Physiol Cell Physiol, 2002 that produce, 283, C1324-1331).The β isotype of glycocorticosteroid receptor is neither in conjunction with the glucocorticoid agonist, also not in conjunction with the glucocorticoid antagonist.In addition, the β isotype mainly is positioned in the nucleus of transfected cell, does not rely on hormonal stimulation.When two kinds of isotypes are all expressed in same cell, the gene expression that inhibitory hormone is inductive, glycocorticosteroid receptor is alpha mediated of glycocorticosteroid receptor β energy stimulates, this prompting β isotype plays effect (the Oakley et al. of the inhibitor of glycocorticosteroid receptor alpha active, J Biol Chem, 1996,271,9550-9559).Unless otherwise, otherwise people's glycocorticosteroid receptor described herein is defined as the omnipresence product of the gene that is positioned on the chromosome 5q11-q13.
Transfection the cell line of complementary glycocorticosteroid receptor antisense RNA chain, demonstrate that glycocorticosteroid receptor mRNA level reduces and glycocorticosteroid receptor agonist dexamethasone replied reduction (Pepin and Barden, Mol Cell Biol, 1991,11,1647-1653).The transgenic mice that carries antisense glycocorticosteroid receptor gene constructs be used to study glucocorticoid to the feedback effect of hypothalmus-pituitary-adrenal axis (Pepin etal., Nature, 1992,355,725-728).In another research to similar genetically engineered mice, caloric intake and expenditure, heart and vastus lateralis lipoprotein lipase activity and heart and brown adipose tissue norepinephrine are all compared according to mice low.On the contrary, fat content and total body energy comparison are significantly much higher according to mice.These results suggest, defective glycocorticosteroid receptor west is carried can influence the energy balance by increasing energy efficiency, and these results have given prominence to regulating action (the Richard et al. of hypothalmus-pituitary-adrenal axis variation to the muscle lipoprotein lipase activity, Am J Physiol, 1993,265, R146-150).
Assess in the animal model of anxiety, learning and memory power being designed, measured the influence to behavior of glycocorticosteroid receptor antagonist.The minimizing that glycocorticosteroid receptor is expressed in the rat of the antisense oligodeoxyribonucleotide of long-term Intraventricular infusion targeting glycocorticosteroid receptor mRNA, do not disturb space in the Morris water maze laboratory (the Engelmann et al. that cruises, Eur J Pharmacol, 1998,361,17-26).The antisense oligodeoxyribonucleotide of bilateral infusion targeting glycocorticosteroid receptor mRNA in the dentate gyrus of rat hippocampus, stationarity (immobility) (Korte et al., Eur J Pharmacol, 1996 of rat in the experiment of Porsolt forced swimming have been reduced, 301,19-25).
Glucocorticoid usually is because it uses obtaining such as the immunosuppressant in the treatment of diseases of anaphylaxis, asthma, rheumatoid arthritis, AIDS, systemic lupus erythematosus (sle) and degenerative osteoarthritis, antiinflammatory action.The negative adjusting of gene expression as the negative adjusting that the interaction by glycocorticosteroid receptor and NF-kB causes, it is believed that be the reason of glucocorticoid antiinflammatory action in vivo to small part.These three kinds of cytokines of interleukin-6, tumor necrosis factor and interleukin-1 are the reasons that cause most of hypothalamic-pituitary-adrenals (HPA) axle of inflammation in stress process to stimulate.Hpa axis and systemic sympathetic nerve and adrenal medulla system are the peripheral components of stress response system, be responsible for keeping basic stable state with stress relevant stable state.Glucocorticoid is as the end products of hpa axis, can suppress the generation of all three kinds of inflammatory cytokine, can also suppress their effects to target tissue, exception be interleukin-6, itself and glucocorticoid synergism stimulate the generation of acute phase reactant.The activity of glucocorticoid treatment can reduction hpa axis (Chrousos, N Engl J Med, 1995,332,1351-1362).
In some cases, the patient can resist the glucocorticoid treatment.A reason of the resistance of this a pair of steroid is the sudden change or the pleomorphism that exist in the glycocorticosteroid receptor gene.Be reported in and had 15 missense, 3 nonsenses, 3 frameshit, 1 splice site and 2 road montages sudden change (alternative splice mutation) and 16 relevant (Bray and Cotton of pleomorphism in addition in the NR3C1 gene with the glucocorticoid resistance, Hum Mutat, 2003,21,557-568).The other research of in the mankind, carrying out pointed out positive correlation between the allele of metabolism syndrome incidence rate and progress and glycocorticosteroid receptor (GR) gene (Rosmond, Obes Res, 2002,10,1078-1086).
The glucocorticoid insensitivity of other situations is relevant with the change of the expression of glycocorticosteroid receptor isotype.The research that people's glycocorticosteroid receptor β isotype mRNA among the glucocorticoid resistance ulcerative colitis patient is expressed discloses, the existence of this mRNA is than significantly higher in the responsive patient of glucocorticoid, the expression of this prompter's glycocorticosteroid receptor β mRNA in peripheral blood lymphocytes can be served as predictor (the Honda et al. that the glucocorticoid in the ulcerative colitis is replied, Gastroenterology, 2000,118,859-866).Increase in obviously numerous expression of glucocorticoid also being observed glycocorticosteroid receptor β in insensitive asthmatic patient.In addition, in peripheral blood lymphocytes from insensitive patient's transfection to glucocorticoid, found DNA binding ability unusual of the glycocorticosteroid receptor that causes by cytokine, and the HepG2 cell with glycocorticosteroid receptor β gene has caused remarkable reduction (the Leung et al. of glycocorticosteroid receptor α DNA binding ability, J Exp Med, 1997,186,1567-1574).The dexamethasone combination studies have shown that people's glycocorticosteroid receptor β does not change the affinity of glycocorticosteroid receptor α to the hormone part, but changes its ability in conjunction with GRE (Bamberger et al., J ClinInvest, 1995,95,2435-2441).Generally speaking, these presentation of results, glycocorticosteroid receptor β by with glycocorticosteroid receptor α competition GRE target site, can serve as on the physiology with Pathophysiology on relevant endogenous inhibitor to the glucocorticoid effect.
In liver, the glucocorticoid agonist increases the liver glucose generation by activating glycocorticosteroid receptor, and this can cause the expression of glyconeogenesis enzyme PCK (PEPCK) and G-6-Pase to increase subsequently.By glyconeogenesis, glucose be able to from non-hexose precursor such as lactic acid, acetone acid and alanine form (Link, Curr Opin InvestigDrugs, 2003,4,421-429).Steroid glycocorticosteroid receptor antagonist such as RU 486 in the rodent model of diabetes, have been tested.The mice (being called the db/db mice) that lacks the leptin acceptor gene is obesity in heredity, suffer from diabetes and hyperinsulinemia.It is about 49% to have reduced blood-glucose with the db/db mice of RU 486 treatment hyperglycemia, does not influence plasma insulin level.In addition, compare with untreated mice, expression (the Friedman et al. of glycocorticosteroid receptor response gene PEPCK, G-6-Pase, glucose transporter 2 types and the tyrosine aminotransferase of RU 486 treatments reduction the in the db/db mice, J Biol Chem, 1997,272,31475-31481).RU 486 can also be by reducing diabetes (the Gettys et al. in the ob/ob mouse model that serum insulin and blood glucose levels improve diabetes, obesity and hyperinsulinemia, Int J Obes Relat Metab Disord, 1997,21,865-873).
Because the increase of glyconeogenesis is considered to the main source of the increase that glucose produces in the diabetes, done research to multiple for the treatment target that suppresses the liver glucose generation.Because the antagonist of glycocorticosteroid receptor can improve diabetes in animal model, this chemical compound is one of potential medicine of being sought.But, the glycocorticosteroid receptor antagonist has deleterious systemic effect, comprise hpa axis activation (Link, Curr Opin InvestigDrugs, 2003,4,421-429).The active increase of hpa axis is relevant with the inhibition of immune related inflammation effect, and this suppresses to increase the susceptibility to infectious agent and tumor.The relevant disease of inhibition with the immunomediated inflammatory that causes by the defective in hpa axis or its target tissue, comprise Cushing syndrome, chronic stress, chronic alcoholism and depressive type melancholy (Chrousos, NEngl J Med, 1995,332,1351-1362).Therefore, be opened to liver specificity glycocorticosteroid receptor antagonist and can have value especially.Steroid glycocorticosteroid receptor antagonist and bile acid are puted together, so that with their targeting livers (Apelqvist et al., 2000).The at present known healing potion that does not also have energy targeting glycocorticosteroid receptor and don't unwanted periphery influence occurs (Link, Curr Opin Investig Drugs, 2003,4,421-429).Therefore, to the demand of the medicament that can effectively suppress liver glycocorticosteroid receptor long-term existence still.
Definition
" glycocorticosteroid receptor " is that its expression is treated by lacking gene outcome or the protein that antisense compounds is regulated.Glycocorticosteroid receptor is commonly referred to GCCR.
" GCCR nucleic acid " means the nucleic acid of any coding GCCR.For example, in certain embodiments, GCCR nucleic acid include but not limited to the to encode DNA sequence of GCCR, the RNA sequence of transcribing from the DNA of coding GCCR and the mRNA sequence of coding GCCR." GCCRmRNA " means the mRNA of coding GCCR.
The treatment indication
Antisense technology is the effective means that reduces the expression of specific gene product, therefore can be used for multiple in order in therapeutic, diagnostic and the research application of regulating the glycocorticosteroid receptor expression.In addition, in certain embodiments, liver be give antisense oligonucleotide find to exist one of tissue of maximum concentration (Geary et al., Curr.Opin.Investig.Drugs, 2001,2,562-573).Therefore, the method that in this embodiment, that antisense technology has been represented is noticeable, the liver specificity of glycocorticosteroid receptor is suppressed.
In certain embodiments, the short antisense compounds of the nucleic acid of targeting coding glycocorticosteroid receptor is arrived liver by precedence partition.In certain embodiments, lacking the usefulness that antisense compounds compares with longer parent compound in liver improves.In certain embodiments, target RNA is mainly expressed in liver.
Use for treatment, suffer from the disease that to treat by the expression of regulating GCCR or the experimenter of disease by giving one or more short antisense compounds, treat to suspect.In limiting examples, described method comprises that the short antisense compounds with the treatment effective dose gives the step of animal.Some short antisense compounds can suppress the active of GCCR and/or suppress the expression of GCCR.In certain embodiments, the active or expression of the GCCR among the experimenter is suppressed and reaches at least 10%, at least 20%, at least 25%, at least 30%, at least 40%, at least 50%, at least 60%, at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 98%, at least 99% or 100%.In certain embodiments, the active or expression of the GCCR among the experimenter is suppressed and reaches at least 30%.In certain embodiments, the active or expression of the GCCR among the experimenter is suppressed and reaches at least 50% or more.
The reduction of the expression of GCCR can for example be measured in blood, blood plasma, serum, fatty tissue, liver or any other body fluid, tissue or the organ of this animal.In certain embodiments, contained cell includes the nucleic acid of the GCCR that encodes and/or they contain GCCR albumen itself in the middle of this fluid to be analyzed, tissue or the organ.
Some medicine that comprises short antisense compounds and other compositionss also are provided.In certain embodiments, short antisense compounds is to be added to suitable medicine by certain chemical compound with effective dose can accept diluent or carrier, uses in pharmaceutical composition.
In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid has short antisense compounds characteristic or feature any or that multiple this paper summarized.In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid has and is selected from following die body (pterion-deoxidation interval-pterion): 1-12-1,1-1-10-2,2-10-1-1,3-10-3,2-10-3,2-10-2,1-10-1,1-10-2,3-8-3,2-8-2,1-8-1,3-6-3 or 1-6-1.In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid has and is selected from following die body (pterion-deoxidation interval-pterion): 1-10-1,2-10-2,3-10-3 and 1-9-2.In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid has and is selected from following die body (pterion-deoxidation interval-pterion): 3-10-3,2-10-3,2-10-2,1-10-1,1-10-2,2-8-2,1-8-1,3-6-3 or 1-6-1, more preferably 2-10-2 and 2-8-2.
In certain embodiments, this paper provides by short antisense compounds that gives one or more targeting GCCR nucleic acid or the pharmaceutical composition that comprises this chemical compound and treats individual method.Also provide by the short antisense compounds that gives targeting GCCR nucleic acid and treat the method for suffering from the experimenter of active diseases associated of GCCR or disease.Except diabetes particularly the type ii diabetes, include but not limited to obesity with GCCR diseases associated and disease, metabolic syndrome X, Cushing syndrome, the Ai Dixunshi disease, inflammatory diseases such as asthma, rhinitis and arthritis, anaphylaxis, autoimmune disease, immunodeficiency, anorexia, cachexia, bone loss or bone fragility and wound healing.Metabolic syndrome, metabolic syndrome X or be called for short syndrome X, be meant comprise that obesity, dyslipidemia (particularly high blood triglyceride), glucose do not tolerate, one group of risk factor of hyperglycemia and hypertension.In certain embodiments, the short antisense compounds with targeting GCCR is used for improving the hyperglycemia that is caused by systemic Steroid treatment.In addition, antisense technology provides the means of the expression that suppresses glycocorticosteroid receptor β isotype, and this isotype is proved to be overexpression in the patient who resists the glucocorticoid treatment.
In certain embodiments, the invention provides targeting coding GCCR nucleic acid, can regulate the short antisense compounds of the expression of glycocorticosteroid receptor.Medicine and other compositionss of comprising The compounds of this invention also are provided.The method of regulator of screening glycocorticosteroid receptor and the method for regulating the expression of glycocorticosteroid receptor in cell, tissue or animal are provided in addition, and described method comprises makes described cell, tissue or animal contact with one or multiple The compounds of this invention or compositions.This paper gives treatment and suspects to suffer from or easily suffer from method with the animal (particularly people) of the expression diseases associated or the disease of glycocorticosteroid receptor.This method comprises treatment or prevents one or more The compounds of this invention of effective dose or the people that compositions needs treatment.
The short antisense compounds of some targeting GCCR nucleic acid
In certain embodiments, lacking the antisense compounds targeting has
Figure A20078002541601511
The GCCR nucleic acid of the sequence of the nucleotide 1-106000 of searching number AC012634 (being incorporated herein) with SEQ ID NO:8.In some this embodiment, short antisense compounds and the SEQ ID NO:8 of targeting SEQ ID NO:8 have at least 90% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:8 of targeting SEQ ID NO:8 have at least 95% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:8 of targeting SEQ ID NO:8 have 100% complementarity.In certain embodiments, the short antisense compounds of targeting SEQ ID NO:8 comprises the nucleotide sequence that is selected from the nucleotide sequence that provides in table 10 and 11.
The nucleotide sequence that each SEQ ID NO provides in the table 10 and 11 is independent of any to connecting the modification of key or nuclear base between sugar moieties, nucleoside.Thus, the defined short antisense compounds of certain SEQ ID NO can comprise one or more to connecting the modification of key or nuclear base between sugar moieties, nucleoside independently.Isis number (Isis NO.) described antisense compounds represented the nuclear base sequence with one or more to connecting key between sugar moieties, nucleoside or examining the combination of the modification of base.
In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid comprises the gapmer die body.In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid comprises 2-10-2 gapmer die body.
Table 10 and 11 has been enumerated the example of the short antisense compounds of targeting SEQ ID NO:8.Table 10 has been enumerated the short antisense compounds that 100% complementarity is arranged with SEQ ID NO:8.Table 11 has been enumerated the short antisense compounds that has one or two mispairing with respect to SEQ ID NO:8.The file that is marked with " gapmer die body " is represented the pterion of each short antisense compounds-at interval-pterion die body.Spacer segment comprises 2 '-deoxyribonucleotide, and each nucleotide of each pterion section comprises the sugar through 2 '-modification.The concrete sugar through 2 '-modification is also represented in " gapmer die body " file.For example, " 2-10-2 MOE " means 2-10-2 gapmer die body, and wherein the spacer segment both sides of 10 2 '-deoxyribonucleotides are connected to the pterion section of 2 nucleotide, and wherein the nucleotide of pterion section is 2 '-MOE nucleotide.Connecting key between nucleoside is thiophosphate.Short antisense compounds comprises the 5-methylcytidine that substitutes not modified cytosine, unless show " not modified cytosine " in the gapmer die body file, represented in this case cytosine is not modified cytosine.For example, " 5-mC is only in the interval " expression spacer segment has the 5-methylcytidine, and the pterion section has not modified cytosine.
Table 10: the short antisense compounds of targeting SEQ ID NO:8
ISIS NO.5 ' target site3 ' target siteSequence (5 '-3 ')The Gapmer die body SEQ ID NO
371644 88142 88155 TTTGGGAGGTGGTC 2-10-2 MOE 413
371645 88156 88169 CACACCAGGCAGAG 2-10-2 MOE 414
371649 88212 88225 CTTTACAGCTTCCA 2-10-2 MOE 415
371651 88242 88255 CACTACCTTCCACT 2-10-2 MOE 416
371652 88248 88261 AACACACACTACCT 2-10-2 MOE 417
371653 88256 88269 CTCTTCAAAACACA 2-10-2 MOE 418
371665 92037 92050 GTAATTGTGCTGTC 2-10-2 MOE 419
371669 92086 92099 TTTTTCTTCGAATT 2-10-2 MOE 420
371671 92114 92127 CATTTTCGATAGCG 2-10-2 MOE 421
371673 92142 92155 ACCTTCCAGGTTCA 2-10-2 MOE 422
Table 11: targeting SEQ ID NO:8 and have the short antisense compounds of 1 or 2 mispairing
ISIS NO5 ' target site3 ' target siteSequence (5 '-3 ')The Gapmer die body SEQ ID NO
371638 2039 2052 ATAGGAAGCATAAA 2-10-2 MOE 423
371650 4949 4962 TCTTTTAAAGAAGA 2-10-2 MOE 424
371673 10187 10200 ACCTTCCAGGTTCA 2-10-2 MOE 422
371660 13465 13478 AAGGATATTTTAAA 2-10-2 MOE 425
371660 14428 14441 AAGGATATTTTAAA 2-10-2 MOE 425
371654 15486 15499 GAACAAAAATTAAA 2-10-2 MOE 427
371661 16638 16651 TTCCACAGATCTGT 2-10-2 MOE 428
371653 17892 17905 CTCTTCAAAACACA 2-10-2 MOE 418
371679 18444 18457 TTTATAAAGTAAAG 2-10-2 MOE 429
371645 19816 19829 CACACCAGGCAGAG 2-10-2 MOE 414
371638 21555 21568 ATAGGAAGCATAAA 2-10-2 MOE 423
371650 21775 21788 TCTTTTAAAGAAGA 2-10-2 MOE 424
371679 21902 21915 TTTATAAAGTAAAG 2-10-2 MOE 429
371655 22507 22520 TACTGTGAGAAATA 2-10-2 MOE 433
371655 22722 22735 TACTGTGAGAAATA 2-10-2 MOE 433
371672 25662 25675 TTCCAGCTTGAAGA 2-10-2 MOE 435
371678 25926 25939 GATCAGTTCTCATG 2-10-2 MOE 436
371655 26041 26054 TACTGTGAGAAATA 2-10-2 MOE 433
371638 29770 29783 ATAGGAAGCATAAA 2-10-2 MOE 423
371668 30551 30564 TTATCAATGATGCA 2-10-2 MOE 439
371670 40584 40597 GCATGCTGGACAGT 2-10-2 MOE 440
371654 43331 43344 GAACAAAAATTAAA 2-10-2 MOE 427
371650 46024 46037 TCTTTTAAAGAAGA 2-10-2 MOE 424
371659 50372 50385 TTGCACCTGAACTA 2-10-2 MOE 443
371634 50565 50578 CAGAATATATTTCT 2-10-2 MOE 444
371673 56942 56955 ACCTTCCAGGTTCA 2-10-2 MOE 422
371654 62372 62385 GAACAAAAATTAAA 2-10-2 MOE 427
371679 63537 63550 TTTATAAAGTAAAG 2-10-2 MOE 429
371654 64908 64921 GAACAAAAATTAAA 2-10-2 MOE 427
371661 65795 65808 TTCCACAGATCTGT 2-10-2 MOE 428
371645 70997 71010 CACACCAGGCAGAG 2-10-2 MOE 414
371661 77400 77413 TTCCACAGATCTGT 2-10-2 MOE 428
371663 82329 82342 ATAAGAGATTAAAA 2-10-2 MOE 450
371633 83426 83439 TCCCCCTTCTCATT 2-10-2 MOE 451
371662 85873 85886 GGGCATTGTTAAAA 2-10-2 MOE 452
371654 86476 86489 GAACAAAAATTAAA 2-10-2 MOE 427
371679 86516 86529 TTTATAAAGTAAAG 2-10-2 MOE 429
371641 88097 88110 AGAACTCACATCTG 2-10-2 MOE 455
371642 88111 88124 GAGCTGGACGGAGG 2-10-2 MOE 456
371646 88170 88183 AAGCTTCATCGGAG 2-10-2 MOE 457
371647 88184 88197 ATAATGGCATCCCG 2-10-2 MOE 458
371650 88226 88239 TCTTTTAAAGAAGA 2-10-2 MOE 424
371673 91493 91506 ACCTTCCAGGTTCA 2-10-2 MOE 422
371664 92030 92043 TGCTGTCCTATAAG 2-10-2 MOE 460
371666 92044 92057 CACAAAGGTAATTG 2-10-2 MOE 461
371667 92058 92071 ATCATTTCTTCCAG 2-10-2 MOE 462
371668 92072 92085 TTATCAATGATGCA 2-10-2 MOE 463
371670 92100 92113 GCATGCTGGACAGT 2-10-2 MOE 440
371672 92128 92141 TTCCAGCTTGAAGA 2-10-2 MOE 435
371674 92147 92160 CCATTACCTTCCAG 2-10-2 MOE 466
371637 92983 92996 GCATAAACAGGGTT 2-10-2 MOE 467
371654 93928 93941 GAACAAAAATTAAA 2-10-2 MOE 427
371641 99772 99785 AGAACTCACATCTG 2-10-2 MOE 455
371679 99883 99896 TTTATAAAGTAAAG 2-10-2 MOE 429
371660 99933 99946 AAGGATATTTTAAA 2-10-2 MOE 425
371635 105004 105017 TATGAAAGGAATGT 2-10-2 MOE 472
371654 105028 105041 GAACAAAAATTAAA 2-10-2 MOE 427
371676 106482 106495 TTCCTTAAGCTTCC 2-10-2 MOE 474
371650 107838 107851 TCTTTTAAAGAAGA 2-10-2 MOE 424
371673 110922 110935 ACCTTCCAGGTTCA 2-10-2 MOE 422
371673 111580 111593 ACCTTCCAGGTTCA 2-10-2 MOE 422
371634 114608 114621 CAGAATATATTTCT 2-10-2 MOE 444
371638 115040 115053 ATAGGAAGCATAAA 2-10-2 MOE 423
371660 116244 116257 AAGGATATTTTAAA 2-10-2 MOE 425
371663 116657 116670 ATAAGAGATTAAAA 2-10-2 MOE 450
371673 118068 118081 ACCTTCCAGGTTCA 2-10-2 MOE 422
371666 118834 118847 CACAAAGGTAATTG 2-10-2 MOE 461
371660 119858 119871 AAGGATATTTTAAA 2-10-2 MOE 425
371660 120210 120223 AAGGATATTTTAAA 2-10-2 MOE 425
371662 120876 120889 GGGCATTGTTAAAA 2-10-2 MOE 452
371655 124004 124017 TACTGTGAGAAATA 2-10-2 MOE 433
371656 124170 124183 GAACAGTTAAACAT 2-10-2 MOE 485
In certain embodiments, the target zone is the nucleotide 88142-88269 of SEQ ID NO:8.In certain embodiments, lack the nucleotide 88142-88269 of antisense compounds targeting SEQ ID NO:8.In some this embodiment, the short antisense compounds of targeted nucleotide 88142-88269 comprises the nucleotide sequence that is selected from SEQ ID NO 413,414,415,416,417 or 418.In some this embodiment, the short antisense compounds of the nucleotide 88142-88269 of targeting SEQ IDNO:8 is selected from Isis NO.371644,371645,371649,371651,371652 or 371653.
In certain embodiments, the target zone is the nucleotide 88142-88169 of SEQ ID NO:8.In certain embodiments, lack the nucleotide 88142-88169 of antisense compounds targeting SEQ ID NO:8.In some this embodiment, the short antisense compounds of targeted nucleotide 88142-88169 comprises the nucleotide sequence that is selected from SEQ ID NO 413 or 414.In some this embodiment, the short antisense compounds of the nucleotide 88142-88169 of targeting SEQ ID NO:8 is selected from Isis NO.371644 or 371645.
In certain embodiments, the target zone is the nucleotide 88242-88269 of SEQ ID NO:8.In certain embodiments, lack the nucleotide 88242-88269 of antisense compounds targeting SEQ ID NO:8.In some this embodiment, the short antisense compounds of targeted nucleotide 88242-88269 comprises the nucleotide sequence that is selected from SEQ ID NO 416,417 or 418.In some this embodiment, the short antisense compounds of the nucleotide 88242-88269 of targeting SEQ ID NO:8 is selected from Isis NO.371651,371652 or 371653.
In certain embodiments, the target zone is the nucleotide 92037-92155 of SEQ ID NO:8.In certain embodiments, lack the nucleotide 92037-92155 of antisense compounds targeting SEQ ID NO:8.In some this embodiment, the short antisense compounds of targeted nucleotide 92037-92155 comprises the nucleotide sequence that is selected from SEQ ID NO 419,420,421 or 422.In some this embodiment, the short antisense compounds of the nucleotide 92037-92155 of targeting SEQ ID NO:8 is selected from Isis NO.371665,371669,371671 or 171673.
In certain embodiments, the target zone is the nucleotide 92114-92155 of SEQ ID NO:8.In certain embodiments, lack the nucleotide 92114-92155 of antisense compounds targeting SEQ ID NO:8.In some this embodiment, the short antisense compounds of targeted nucleotide 92114-92155 comprises the nucleotide sequence that is selected from SEQ ID NO 421 or 422.In some this embodiment, the short antisense compounds of the nucleotide 92114-92155 of targeting SEQ ID NO:8 is selected from Isis NO.371671 or 171673.
In certain embodiments, its length of short antisense compounds of targeting GCCR nucleic acid is 8-16, preferred 9-15, more preferably 9-14, more preferably 10-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting GCCR nucleic acid is 9-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting GCCR nucleic acid is 10-14 nucleotide.In certain embodiments, this short antisense compounds is short antisense oligonucleotide.
In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid is short gapmer.In some this embodiment, comprise at least one high-affinity in the short gapmer of targeting GCCR nucleic acid one or more pterions therein and modify.In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid comprises 1-3 high-affinity modification in each pterion.In some this embodiment, the nucleoside in pterion or nucleotide comprise 2 ' and modify.In some this embodiment, the monomer in pterion is BNA.In some this embodiment, the monomer in pterion is selected from α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA, β-D-methylene oxygen base (4 '-CH2-O-2 ') BNA, ethyleneoxy group (4 '-(CH2)2-O-2 ') BNA, amino oxygen base (4 '-CH2-O-N (R)-2 ') BNA and oxygen base amino (4 '-CH2-N (R)-O-2 ') BNA.In certain embodiments, the monomer in pterion comprises in 2 ' position and is selected from following substituent group: pi-allyl, amino, azido, thio group, O-pi-allyl, O-C1-C10Alkyl ,-OCF3, O-(CH2)2-O-CH3, 2 '-O (CH2)2SCH3, O-(CH2)2-O-N (Rm) (Rn) and O-CH2-C (=O)-N (Rm) (Rn), each R whereinmAnd RnIndependent is H or substituted or unsubstituted C1-C10Alkyl.In certain embodiments, the monomer in pterion is 2 ' MOE nucleotide.
In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid comprises between 5 ' pterion and 3 ' pterion at interval.In certain embodiments, comprise 5,6,7,8,9,10,11,12,13 or 14 monomers at interval.In certain embodiments, Jian Ge monomer is not modified deoxyribonucleotide.In certain embodiments, Jian Ge monomer is not modified ribonucleotide.In certain embodiments, modify (if any) at interval and cause producing such antisense compounds, when in conjunction with its target nucleic acids, this chemical compound can be supported the cutting of RNA enzyme (including but not limited to RNA enzyme H).
In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid has the same Dan Julian key.In some this embodiment, these keys all are that thiophosphate connects key.In certain embodiments, Lian Jian is that di-phosphate ester connects key.In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid has mixed matrix.
In certain embodiments, its length of short antisense compounds of targeting GCCR nucleic acid is 8 monomers.In certain embodiments, its length of short antisense compounds of targeting GCCR nucleic acid is 9 monomers.In certain embodiments, its length of short antisense compounds of targeting GCCR nucleic acid is 10 monomers.In certain embodiments, its length of short antisense compounds of targeting GCCR nucleic acid is 11 monomers.In certain embodiments, its length of short antisense compounds of targeting GCCR nucleic acid is 12 monomers.In certain embodiments, its length of short antisense compounds of targeting GCCR nucleic acid is 13 monomers.In certain embodiments, its length of short antisense compounds of targeting GCCR nucleic acid is 14 monomers.In certain embodiments, its length of short antisense compounds of targeting GCCR nucleic acid is 15 monomers.In certain embodiments, its length of short antisense compounds of targeting GCCR nucleic acid is 16 monomers.In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid comprises 9-15 monomer.In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid comprises 10-15 monomer.In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid comprises 12-14 monomer.In certain embodiments, the short antisense compounds of targeting GCCR nucleic acid comprises 12-14 nucleotide or nucleoside.
In certain embodiments, the invention provides the method for the expression of regulating GCCR.In certain embodiments, this method comprises the short antisense compounds that uses one or more targeting GCCR nucleic acid, and wherein the short antisense compounds of this targeting GCCR nucleic acid is about 8 to about 16, preferably 9-15, more preferably 9-14, more preferably 10-14 monomer (promptly about 8 monomer to about 16 connections).Those of ordinary skills will appreciate that, this comprises the method that the short antisense compounds that uses one or more 8,9,10,11,12,13,14,15 or 16 monomeric targeting GCCR nucleic acid is regulated the expression of GCCR.
In certain embodiments, the method for adjusting GCCR comprises that using length is the short antisense compounds of 8 monomeric targeting GCCR nucleic acid.In certain embodiments, the method for adjusting GCCR comprises that using length is the short antisense compounds of 9 monomeric targeting GCCR nucleic acid.In certain embodiments, the method for adjusting GCCR comprises that using length is the short antisense compounds of 10 monomeric targeting GCCR nucleic acid.In certain embodiments, the method for adjusting GCCR comprises that using length is the short antisense compounds of 11 monomeric targeting GCCR nucleic acid.In certain embodiments, the method for adjusting GCCR comprises the short antisense compounds that uses 12 monomeric targeting GCCR nucleic acid of length.In certain embodiments, the method for adjusting GCCR comprises that using length is the short antisense compounds of 13 monomeric targeting GCCR nucleic acid.In certain embodiments, the method for adjusting GCCR comprises that using length is the short antisense compounds of 14 monomeric targeting GCCR nucleic acid.In certain embodiments, the method for adjusting GCCR comprises that using length is the short antisense compounds of 15 monomeric targeting GCCR nucleic acid.In certain embodiments, the method for adjusting GCCR comprises that using length is the short antisense compounds of 16 monomeric targeting GCCR nucleic acid.
In certain embodiments, the method for the expression of adjusting GCCR comprises that use comprises the short antisense compounds of 9-15 monomeric targeting GCCR nucleic acid.In certain embodiments, the method for the expression of adjusting GCCR comprises that use comprises the short antisense compounds of 10-15 monomeric targeting GCCR nucleic acid.In certain embodiments, the method for the expression of adjusting GCCR comprises that use comprises the short antisense compounds of 12-14 monomeric targeting GCCR nucleic acid.In certain embodiments, the method for the expression of adjusting GCCR comprises the short antisense compounds that uses the targeting GCCR nucleic acid that comprises 12-14 nucleotide or nucleoside.
7. glucagon receptor (GCGR)
Normal keeping of glucemia is the metabolism incident of a careful adjusting.This is responsible for keeping in postabsorptive state (postabsorbative state) 29 amino acid peptides of blood glucose levels glucagon, can increase the release of glucose by activating the lipolysis in liver glycogenolysis, glyconeogenesis, the stimulation fatty tissue and stimulating insulin secretion from liver.In hypertension glucose level process, insulin can reverse the liver glycogenolysis of glucagon mediation and the enhancing of glyconeogenesis.In diabetics, insulin or do not have, or not exclusively effectively.Though treatment of diabetes is concentrating on the increase insulin level traditionally, but the antagonism of glucagon function has been considered to a kind of alternative medicine because glucagon is to bring into play its physiological action by carrying out signal transduction with the nationality glucagon receptor, therefore glucagon receptor has been considered to potential treatment target (the Madsen et al. of diabetes, Curr.Pharm.Des., 1999,5,683-691).
Glucagon receptor belongs to the superfamily of the g protein coupled receptor with seven membrane spaning domains.It still can in conjunction with structurally with the member of the littler subfamily of the homoreceptor of the similar peptide of glucagon.The gene of coding human glucagon receptor was cloned in 1994, to the analysis of genome sequence disclosed a plurality of introns and with 82% homogeneity (Lok et al., Gene, 1994,140, the 203-209. of rat glucagon receptor gene; MacNeil et al., Biochem.Biophys.Res.Commun., 1994,198,328-334).The clone of rat glucagon receptor gene also caused multiple in addition road splice variant report (Maget et al., FEBS Lett., 1994,351,271-275).Human glucagon receptor gene mapping on chromosome 17q25 (Menzel et al., Genomics, 1994,20,327-328).Codon 40 Gly of place cause the affinity of glucagon is reduced by 3 times of (Fujisawa et al. to the missense mutation of Ser in glucagon receptor gene, Diabetologia, 1995,38,983-985), and this sudden change is associated with several morbid states, comprise noninsulindependent diabetes (Fujisawa et al., Diabetologia, 1995,38,983-985), hypertension (Chambers andMorris, Nat.Genet., 1996,12,122) and central obesity (centraladiposity) (Siani et al., Obes.Res., 2001,9,722-726).
Definition
" glucagon receptor " is that its expression is treated by lacking gene outcome or the protein that antisense compounds is regulated.Glucagon receptor is commonly referred to GCGR, but also can be described as GR, GGR, MGC138246, MGC93090.
" GCGR nucleic acid " means the nucleic acid of any coding GCGR.For example, in certain embodiments, GCGR nucleic acid include but not limited to encode GCGR (DNA) sequence of GCGR, the RNA sequence of transcribing from the DNA of coding GCGR and the mRNA sequence of coding GCGR." GCGR mRNA " means the proteic mRNA of coding GCGR.
The treatment indication
Antisense technology is to reduce the effective means that glucagon receptor (GCGR) is expressed, and has been proved to be in multiple therapeutic, diagnosis type and the application of research property to have unique applications.Thus, in certain embodiments, the invention provides targeting coding glucagon receptor nucleic acid, can regulate the short antisense compounds of the expression of glucagon receptor.This paper provides in addition and can suppress the short antisense compounds that GCGR expresses.This paper also provides treatment individual method, and described method comprises and gives the pharmaceutical composition that one or more comprise the short antisense compounds of targeting GCGR nucleic acid.In certain embodiments, because suppressing GCGR, the short antisense compounds of targeting GCGR nucleic acid expresses, this paper provides by giving the pharmaceutical composition that one or more comprise the short antisense compounds of targeting GCGR nucleic acid, treat to suffer from the method with the experimenter of active diseases associated of GCGR or disease.For example, this paper provides treatment to suffer from the experimenter's of high blood-glucose, hyperglycemia, prediabetes, type ii diabetes, metabolic syndrome, obesity and/or insulin resistance method.
This paper also is susceptible to the pharmaceutical composition of short antisense compounds that comprises one or more targeting GCGR and drug acceptable carrier, diluent, reinforcing agent or the excipient of choosing wantonly.Some The compounds of this invention also can be used for preparing in order to treatment and the glucagon effect diseases associated of GCGR mediation and the medicine of disease.
Certain embodiments of the present invention comprise the method for the expression that reduces the GCGR in tissue or the cell, and described method comprises contacts the encode short antisense compounds of nucleic acid of GCGR or the pharmaceutical composition that comprises this short antisense compounds of described cell or tissue and targeting.In some this embodiment, the invention provides the method that reduces blood glucose levels, blood triglyceride level or blood cholesterol levels among the experimenter, described method comprises and gives this experimenter with weak point antisense compounds or pharmaceutical composition.Blood levels can be blood plasma level or serum levels.What also be susceptible to is method, the method that improves the GLP-1 level of improving insulin sensitivity in the animal and the method that suppresses liver glucose output, and these methods comprise and give described animal with antisense oligonucleotide of the present invention or pharmaceutical composition.The improvement of insulin sensitivity can be represented by the reduction of circulation insulin level.
In certain embodiments, the invention provides treatment and suffer from method with the experimenter of the GLA diseases associated of GCGR mediation or disease, described method comprise will treatment or the short antisense compounds or the pharmaceutical composition of prevention effective dose give this experimenter.In certain embodiments, this disease or disease may be metabolic disease or disease.In certain embodiments, this metabolic disease or disease are diabetes, hyperglycemia, hyperlipemia, metabolic syndrome X, obesity, the high glucagonemia of constitutional, insufficient insulin or insulin resistance.In some embodiments, diabetes are type ii diabetes.In some embodiments, obesity is that meals cause.In some embodiments, hyperlipemia raises relevant with the blood lipid level.Lipid comprises cholesterol and triglyceride.In one embodiment, disease is the liver fat degeneration.In some embodiments, steatosis is fat hepatitis or non-alcoholic stellato-hepatitis.
In certain embodiments, the invention provides and use oligomeric compounds described herein, prevent or postpone the method and the method that keeps the β cell function in the animal of the outbreak that blood glucose levels raises in the animal.
The short antisense compounds of some targeting GCGR can be used to regulate the expression of the GCGR among the experimenter's (as animal, including but not limited to the people) who needs.In certain embodiments, this method comprises that the short antisense compounds with the expression that can reduce GCGR RNA of effective dose gives the step of described animal.In certain embodiments, lack level or the function that antisense compounds can reduce GCGRRNA effectively.Because the reduction of GCGR mRNA level also can cause the change of GCGR protein expression product, also can be measured this change that produces.Some can effectively reduce the level of GCGR RNA or protein expression product or the antisense compounds of function, is considered to active antisense compounds.In certain embodiments, short antisense compounds can reduce the expression of GCGR, causes RNA to reduce and reaches at least 10%, at least 20%, at least 25%, at least 30%, at least 40%, at least 50%, at least 60%, at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 98%, at least 99% or 100%.
The method of regulator of screening glucagon receptor and the method for regulating the expression of glucagon receptor in cell, tissue or animal are provided in addition, described method comprise the short antisense compounds that makes described cell, tissue or animal and one or multiple targeting GCGR or with comprise this compound compositions and contact.This paper gives treatment and suspects to suffer from or easily suffer from method with the animal (particularly people) of the expression diseases associated or the disease of glucagon receptor.Some this method comprises treatment or prevents one or more The compounds of this invention of effective dose or the people that compositions needs treatment.
The reduction of the expression of glucagon receptor can for example be measured in blood, blood plasma, serum, fatty tissue, liver or any other body fluid, tissue or the organ of this animal.Preferably, contained cell contains coding proteic nucleic acid of glucagon receptor and/or glucagon receptor albumen itself in the middle of this analyzed fluid, tissue or the organ.
Medicine and other compositionss of comprising short antisense compounds also are provided.In certain embodiments, the short antisense compounds of nucleic acid of targeting coding GCGR is to be added to suitable medicine by certain chemical compound with effective dose can accept diluent or carrier, uses in pharmaceutical composition.
The short antisense compounds of targeting GCGR nucleic acid has short antisense compounds characteristic or feature any or that multiple this paper summarized.In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid has and is selected from following die body (pterion-deoxidation interval-pterion): 1-12-1,1-1-10-2,2-10-1-1,3-10-3,2-10-3,2-10-2,1-10-1,1-10-2,3-8-3,2-8-2,1-8-1,3-6-3 or 1-6-1.In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid has and is selected from following die body (pterion-deoxidation interval-pterion): 1-12-1,2-10-2,3-10-3,3-8-3,1-1-10-2.
The short antisense compounds of some targeting GCGR nucleic acid
In certain embodiments, lack the antisense compounds targeting and have sequence
Figure A20078002541601621
The GCGR nucleic acid of searching number NM_000160.1 (being incorporated herein) with SEQ ID NO:9.In some this embodiment, short antisense compounds and the SEQ IDNO:9 of targeting SEQ ID NO:9 have at least 90% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:9 of targeting SEQ ID NO:9 have at least 95% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:9 of targeting SEQ ID NO:9 have 100% complementarity.In certain embodiments, the short antisense compounds of targeting SEQ ID NO:9 comprises the nucleotide sequence that is selected from the nucleotide sequence that provides in table 12 and 13.
The nucleotide sequence that each SEQ ID NO provides in the table 12 and 13 is independent of any to connecting the modification of key or nuclear base between sugar moieties, nucleoside.Thus, the defined short antisense compounds of certain SEQ ID NO can comprise one or more to connecting the modification of key or nuclear base between sugar moieties, nucleoside independently.Isis number (Isis NO.) described antisense compounds represented the nuclear base sequence with one or more to connecting key between sugar moieties, nucleoside or examining the combination of the modification of base.
In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid comprises the gapmer die body.In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid comprises 3-10-3 gapmer die body.In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid comprises the gapmer die body.In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid comprises 3-8-3 gapmer die body.In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid comprises the gapmer die body.In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid comprises 2-10-2 gapmer die body.
Table 12 and 13 has been enumerated the example of the short antisense compounds of targeting SEQ ID NO:9.Table 12 has been enumerated the short antisense compounds that 100% complementarity is arranged with SEQ ID NO:9.Table 13 has been enumerated the short antisense compounds that has one or two mispairing with respect to SEQ ID NO:9.The file that is marked with " gapmer die body " is represented the pterion of each short antisense compounds-at interval-pterion die body.Spacer segment comprises 2 '-deoxyribonucleotide, and each nucleotide of each pterion section comprises the sugar through 2 '-modification.The concrete sugar through 2 '-modification is also represented in " gapmer die body " file.For example, " 2-10-2 MOE " means 2-10-2 gapmer die body, and wherein the spacer segment both sides of 10 2 '-deoxyribonucleotides are connected to the pterion section of 2 nucleotide, and wherein the nucleotide of pterion section is 2 '-MOE nucleotide.Connecting key between nucleoside is thiophosphate.Short antisense compounds comprises the 5-methylcytidine that substitutes not modified cytosine, unless show " not modified cytosine " in the gapmer die body file, represented in this case cytosine is not modified cytosine.For example, " 5-mC is only in the interval " expression spacer segment has the 5-methylcytidine, and the pterion section has not modified cytosine.
Table 12: the short antisense compounds of targeting SEQ ID NO:9
ISIS NO.5 ' target site3 ' target siteSequence (5 '-3 ')The Gapmer die body SEQ ID NO
338463 378 393 TAGAGCTTCCACTTCT 3-10-3 MOE 486
338534 378 391 GAGCTTCCACTTCT 3-8-3 MOE 487
327130 499 512 TGTTGGCCGTGGTA 3-8-3 MOE 488
327131 500 513 ATGTTGGCCGTGGT 3-8-3 MOE 489
327132 501 514 GATGTTGGCCGTGG 3-8-3 MOE 490
327133 502 515 AGATGTTGGCCGTG 3-8-3 MOE 491
327134 503 516 GAGATGTTGGCCGT 3-8-3 MOE 492
327135 504 517 GGAGATGTTGGCCG 3-8-3 MOE 493
327136 505 518 AGGAGATGTTGGCC 3-8-3 MOE 494
327137 506 519 CAGGAGATGTTGGC 3-8-3 MOE 495
327138 507 520 GCAGGAGATGTTGG 3-8-3 MOE 496
327139 508 521 GGCAGGAGATGTTG 3-8-3 MOE 497
327140 531 544 GTGGTGCCAAGGCA 3-8-3 MOE 498
327141 532 545 TGTGGTGCCAAGGC 3-8-3 MOE 499
327142 533 546 TTGTGGTGCCAAGG 3-8-3 MOE 500
327143 534 547 TTTGTGGTGCCAAG 3-8-3 MOE 501
327144 535 548 CTTTGTGGTGCCAA 3-8-3 MOE 502
327145 536 549 ACTTTGTGGTGCCA 3-8-3 MOE 503
327146 537 550 CACTTTGTGGTGCC 3-8-3 MOE 504
327147 538 551 GCACTTTGTGGTGC 3-8-3 MOE 505
327148 539 552 TGCACTTTGTGGTG 3-8-3 MOE 506
327149 540 553 TTGCACTTTGTGGT 3-8-3 MOE 507
327150 545 558 CGGTGTTGCACTTT 3-8-3 MOE 508
327151 546 559 GCGGTGTTGCACTT 3-8-3 MOE 509
327152 547 560 AGCGGTGTTGCACT 3-8-3 MOE 510
327153 548 561 AAGCGGTGTTGCAC 3-8-3 MOE 511
327154 549 562 GAAGCGGTGTTGCA 3-8-3 MOE 512
327155 550 563 CGAAGCGGTGTTGC 3-8-3 MOE 513
327156 551 564 ACGAAGCGGTGTTG 3-8-3 MOE 514
327157 552 565 CACGAAGCGGTGTT 3-8-3 MOE 515
327158 553 566 ACACGAAGCGGTGT 3-8-3 MOE 516
327159 554 567 AACACGAAGCGGTG 3-8-3 MOE 517
345897 684 697 GCTGCTGTACATCT 2-10-2 MOE 518
327160 684 697 GCTGCTGTACATCT 3-8-3 MOE 518
327161 685 698 AGCTGCTGTACATC 3-8-3 MOE 520
327162 686 699 AAGCTGCTGTACAT 3-8-3 MOE 521
327163 687 700 GAAGCTGCTGTACA 3-8-3 MOE 522
327164 688 701 GGAAGCTGCTGTAC 3-8-3 MOE 523
327165 689 702 TGGAAGCTGCTGTA 3-8-3 MOE 524
327166 690 703 CTGGAAGCTGCTGT 3-8-3 MOE 525
327167 691 704 CCTGGAAGCTGCTG 3-8-3 MOE 526
327168 692 705 ACCTGGAAGCTGCT 3-8-3 MOE 527
327169 693 706 CACCTGGAAGCTGC 3-8-3 MOE 528
327170 694 707 TCACCTGGAAGCTG 3-8-3 MOE 529
327171 695 708 ATCACCTGGAAGCT 3-8-3 MOE 530
327172 696 709 CATCACCTGGAAGC 3-8-3 MOE 531
327173 697 710 ACATCACCTGGAAG 3-8-3 MOE 532
327174 698 711 TACATCACCTGGAA 3-8-3 MOE 533
327175 699 712 GTACATCACCTGGA 3-8-3 MOE 534
327176 700 713 TGTACATCACCTGG 3-8-3 MOE 535
327177 701 714 GTGTACATCACCTG 3-8-3 MOE 536
327178 869 882 TAGCGGGTCCTGAG 3-8-3 MOE 537
327179 870 883 GTAGCGGGTCCTGA 3-8-3 MOE 538
327180 871 884 TGTAGCGGGTCCTG 3-8-3 MOE 539
327181 872 885 CTGTAGCGGGTCCT 3-8-3 MOE 540
327182 873 886 GCTGTAGCGGGTCC 3-8-3 MOE 541
327183 874 887 GGCTGTAGCGGGTC 3-8-3 MOE 542
327184 875 888 TGGCTGTAGCGGGT 3-8-3 MOE 543
327185 876 889 CTGGCTGTAGCGGG 3-8-3 MOE 544
327186 877 890 TCTGGCTGTAGCGG 3-8-3 MOE 545
327187 878 891 TTCTGGCTGTAGCG 3-8-3 MOE 546
327188 955 968 TGAACACCGCGGCC 3-8-3 MOE 547
327189 956 969 ATGAACACCGCGGC 3-8-3 MOE 548
327190 957 970 CATGAACACCGCGG 3-8-3 MOE 549
327191 958 971 GCATGAACACCGCG 3-8-3 MOE 550
327192 959 972 TGCATGAACACCGC 3-8-3 MOE 551
327193 960 973 TTGCATGAACACCG 3-8-3 MOE 552
327194 961 974 ATTGCATGAACACC 3-8-3 MOE 553
327195 962 975 TATTGCATGAACAC 3-8-3 MOE 554
327196 963 976 ATATTGCATGAACA 3-8-3 MOE 555
327197 964 977 CATATTGCATGAAC 3-8-3 MOE 556
327198 1019 1032 AGGTTGTGCAGGTA 3-8-3 MOE 557
327199 1020 1033 CAGGTTGTGCAGGT 3-8-3 MOE 558
327200 1021 1034 GCAGGTTGTGCAGG 3-8-3 MOE 559
327201 1022 1035 AGCAGGTTGTGCAG 3-8-3 MOE 560
327202 1023 1036 CAGCAGGTTGTGCA 3-8-3 MOE 561
327203 1024 1037 CCAGCAGGTTGTGC 3-8-3 MOE 562
327204 1025 1038 CCCAGCAGGTTGTG 3-8-3 MOE 563
327205 1026 1039 GCCCAGCAGGTTGT 3-8-3 MOE 564
327206 1027 1040 GGCCCAGCAGGTTG 3-8-3 MOE 565
327207 1028 1041 AGGCCCAGCAGGTT 3-8-3 MOE 566
338491 1160 1175 TGTCATTGCTGGTCCA 3-10-3 MOE 567
338562 1160 1173 TCATTGCTGGTCCA 3-8-3 MOE 568
338498 1307 1322 TGGCCAGCCGGAACTT 3-10-3 MOE 569
338569 1307 1320 GCCAGCCGGAACTT 3-8-3 MOE 570
338499 1329 1344 GGGATGAGGGTCAGCG 3-10-3 MOE 571
338570 1329 1342 GATGAGGGTCAGCG 3-8-3 MOE 572
385067 1364 1377 AAGGCAAAGACCAC 3-8-3 MOE 573
338573 1401 1414 GGAGCGCAGGGTGC 3-8-3 MOE 574
338580 1487 1500 TGCACCTCCTTGTT 3-8-3 MOE 575
Table 13: targeting SEQ ID NO:9 and have the short antisense compounds of 1 or 2 mispairing
ISIS NO.5 ' target site3 ' target siteSequence (5 '-3 ')The Gapmer die body SEQ ID NO
338577 158 171 CAGCAGACCCTGGA 3-8-3 MOE 576
338458 237 252 ACATCTGGCAGAGGTT 3-10-3 MOE 577
338529 237 250 ATCTGGCAGAGGTT 3-8-3 MOE 578
338466 318 333 CAGGCCAGCAGGAGTA 3-10-3 MOE 579
338537 318 331 GGCCAGCAGGAGTA 3-8-3 MOE 580
338533 364 377 CAAACAAAAAGTCC 3-8-3 MOE 582
338462 364 379 CTCAAACAAAAAGTCC 3-10-3 MOE 581
338535 397 410 GGTGACATTGGTCA 3-8-3 MOE 584
338464 397 412 GTGGTGACATTGGTCA 3-10-3 MOE 583
338466 470 485 CAGGCCAGCAGGAGTA 3-10-3 MOE 579
338537 470 483 GGCCAGCAGGAGTA 3-8-3 MOE 580
385048 497 510 TTGGCAGTGGTGTT 3-8-3 MOE 587
385049 500 513 ATGTTGGCAGTGGT 3-8-3 MOE 588
338467 503 518 AGGAAATGTTGGCAGT 3-10-3 MOE 589
338538 503 516 GAAATGTTGGCAGT 3-8-3 MOE 590
385050 506 519 CAGGAAATGTTGGC 3-8-3 MOE 591
385051 509 522 GGGCAGGAAATGTT 3-8-3 MOE 592
385052 523 536 AAGGTAGGTACCAG 3-8-3 MOE 593
385053 526 539 ACCAAGGTAGGTAC 3-8-3 MOE 594
385056 535 548 CTTTGTGGCACCAA 3-8-3 MOE 595
385057 538 551 GCACTTTGTGGCAC 3-8-3 MOE 596
338539 539 552 TGCACTTTGTGGCA 3-8-3 MOE 597
385058 541 554 GCTGCACTTTGTGG 3-8-3 MOE 598
385059 544 557 GGTGCTGCACTTTG 3-8-3 MOE 599
385060 547 560 GGCGGTGCTGCACT 3-8-3 MOE 600
385063 556 569 TGAACACTAGGCGG 3-8-3 MOE 601
385064 559 572 TCTTGAACACTAGG 3-8-3 MOE 602
338469 561 576 CACCTCTTGAACACTA 3-10-3 MOE 603
338540 561 574 CCTCTTGAACACTA 3-8-3 MOE 604
385065 562 575 ACCTCTTGAACACT 3-8-3 MOE 605
385066 565 578 CACACCTCTTGAAC 3-8-3 MOE 606
338541 590 603 CCTCGAACCCACTG 3-8-3 MOE 607
338473 658 673 CTTCTGGACCTCGATC 3-10-3 MOE 608
338544 658 671 TCTGGACCTCGATC 3-8-3 MOE 609
338474 681 696 CTGCTATACATCTTGG 3-10-3 MOE 610
338545 681 694 GCTATACATCTTGG 3-8-3 MOE 611
338475 703 718 CACGGTGTACATCACC 3-10-3 MOE 612
338546 703 716 CGGTGTACATCACC 3-8-3 MOE 613
338547 718 731 ACAGACTGTAGCCC 3-8-3 MOE 615
338476 718 733 GGACAGACTGTAGCCC 3-10-3 MOE 614
338550 889 902 CATCGCCAATCTTC 3-8-3 MOE 617
338479 889 904 GTCATCGCCAATCTTC 3-10-3 MOE 616
338551 899 912 ACACTGAGGTCATC 3-8-3 MOE 619
338480 899 914 TCACACTGAGGTCATC 3-10-3 MOE 618
338552 924 937 CGCCCCGTCACTGA 3-8-3 MOE 620
338555 992 1005 AGCAACCAGCAATA 3-8-3 MOE 622
338484 992 1007 CCAGCAACCAGCAATA 3-10-3 MOE 621
338485 1018 1033 CAGGCTGTACAGGTAC 3-10-3 MOE 623
338556 1018 1031 GGCTGTACAGGTAC 3-8-3 MOE 624
338558 1051 1064 AGCTCCTCTCAGAG 3-8-3 MOE 626
338487 1051 1066 GAAGCTCCTCTCAGAG 3-10-3 MOE 625
338559 1079 1092 CAGCCAATGCCCAG 3-8-3 MOE 628
338488 1079 1094 CCCAGCCAATGCCCAG 3-10-3 MOE 627
338560 1131 1144 AAACAGACACTTGA 3-8-3 MOE 630
338489 1131 1146 TCAAACAGACACTTGA 3-10-3 MOE 629
338490 1145 1160 AGCACTGAACATTCTC 3-10-3 MOE 631
338561 1145 1158 CACTGAACATTCTC 3-8-3 MOE 632
338563 1181 1194 ATCCACCAGAATCC 3-8-3 MOE 634
338492 1181 1196 GGATCCACCAGAATCC 3-10-3 MOE 633
338564 1216 1229 TGATCAGTAAGGCC 3-8-3 MOE 635
338565 1232 1245 ACAAAGATGAAAAA 3-8-3 MOE 637
338494 1232 1247 GGACAAAGATGAAAAA 3-10-3 MOE 636
338566 1267 1280 CACGCAGCTTGGCC 3-8-3 MOE 639
338495 1267 1282 GGCACGCAGCTTGGCC 3-10-3 MOE 638
338571 1344 1357 GACCCCCAGCAGAG 3-8-3 MOE 641
338500 1344 1359 TGGACCCCCAGCAGAG 3-10-3 MOE 640
385068 1366 1379 CAAAGGCAAAGACC 3-8-3 MOE 642
385069 1369 1382 TCACAAAGGCAAAG 3-8-3 MOE 643
385070 1372 1385 CAGTCACAAAGGCA 3-8-3 MOE 644
385071 1375 1388 CGTCAGTCACAAAG 3-8-3 MOE 645
385072 1378 1391 GCTCGTCAGTCACA 3-8-3 MOE 646
385073 1381 1394 CATGCTCGTCAGTC 3-8-3 MOE 647
386608 1384 1397 GGGCATGCTCGTCA 1-12-1 MOE 648
386593 1384 1397 GGGCATGCTCGTCA 2-10-2 MOE 648
396146 1384 1397 GGGCATGCTCGTCA 2-10-2 MOE 648
338572 1384 1397 GGGCATGCTCGTCA 3-8-3 MOE 648
396149 1384 1397 GGGCATGCTCGTCA1-1-10-2 2 '-(butyl acetamido)-palmitamide/OMe/OMe 648
386627 1384 1397 GGGCATGCTCGTCA2-10-2 methylene oxygen base BNA 648
386610 1387 1400 CTTGGGCATGCTCG 1-12-1 MOE 654
386595 1387 1400 CTTGGGCATGCTCG 2-10-2 MOE 654
385074 1387 1400 CTTGGGCATGCTCG 3-8-3 MOE 654
385075 1390 1403 TGCCTTGGGCATGC 3-8-3 MOE 657
385076 1393 1406 GGGTGCCTTGGGCA 3-8-3 MOE 648
385077 1396 1409 GCAGGGTGCCTTGG 3-8-3 MOE 659
385078 1399 1412 AGCGCAGGGTGCCT 3-8-3 MOE 660
338502 1401 1416 GTGGAGCGCAGGGTGC 3-10-3 MOE 661
385079 1402 1415 TGGAGCGCAGGGTG 3-8-3 MOE 662
385080 1405 1418 TGGTGGAGCGCAGG 3-8-3 MOE 663
385081 1408 1421 GCTTGGTGGAGCGC 3-8-3 MOE 664
385082 1411 1424 AGAGCTTGGTGGAG 3-8-3 MOE 665
338503 1412 1427 AAAAGAGCTTGGTGGA 3-10-3 MOE 666
338574 1412 1425 AAGAGCTTGGTGGA 3-8-3 MOE 667
385083 1414 1427 AAAAGAGCTTGGTG 3-8-3 MOE 668
385084 1417 1430 CAAAAAAGAGCTTG 3-8-3 MOE 669
338504 1434 1449 AAGGAGCTGAGGAACA 3-10-3 MOE 670
338575 1434 1447 GGAGCTGAGGAACA 3-8-3 MOE 671
327167 1441 1454 CCTGGAAGCTGCTG 3-8-3 MOE 526
338576 1445 1458 AGACCCTGGAAGGA 3-8-3 MOE 673
338505 1445 1460 GCAGACCCTGGAAGGA 3-10-3 MOE 672
338506 1449 1464 ACCAGCAGACCCTGGA 3-10-3 MOE 674
338577 1449 1462 CAGCAGACCCTGGA 3-8-3 MOE 576
338507 1464 1479 CAGTAGAGAACAGCCA 3-10-3 MOE 676
338578 1464 1477 GTAGAGAACAGCCA 3-8-3 MOE 677
338508 1475 1490 TGTTGAGGAAACAGTA 3-10-3 MOE 678
338579 1475 1488 TTGAGGAAACAGTA 3-8-3 MOE 679
338509 1487 1502 CCTGCACCTCCTTGTT 3-10-3 MOE 680
338580 1610 1623 TGCACCTCCTTGTT 3-8-3 MOE 575
In certain embodiments, the target zone is the nucleotide 378-391 of SEQ ID NO:9.In certain embodiments, lack the nucleotide 378-391 of antisense compounds targeting SEQ ID NO:9.In some this embodiment, the short antisense compounds of targeted nucleotide 378-391 comprises the nucleotide sequence that is selected from SEQ ID NO 486 or 487.In some this embodiment, the short antisense compounds of the nucleotide 378-391 of targeting SEQ ID NO:9 is selected from IsisNo 338463 or 338534.
In certain embodiments, the target zone is the nucleotide 499-521 of SEQ ID NO:9.In certain embodiments, lack the nucleotide 499-521 of antisense compounds targeting SEQ ID NO:9.In some this embodiment, the short antisense compounds of targeted nucleotide 499-521 comprises the nucleotide sequence that is selected from SEQ ID NO 488,489,490,491,492,493,494,495,496 or 497.In some this embodiment, the short antisense compounds of the nucleotide 499-521 of targeting SEQ ID NO:9 is selected from Isis No 327130,327131,327132,327133,327134,327135,327136,327137,327138 or 327139.
In certain embodiments, the target zone is the nucleotide 531-553 of SEQ ID NO:9.In certain embodiments, lack the nucleotide 531-553 of antisense compounds targeting SEQ ID NO:9.In some this embodiment, the short antisense compounds of targeted nucleotide 531-553 comprises the nucleotide sequence that is selected from SEQ ID NO 498,499,500,501,502,503,504,505,506 or 507.In some this embodiment, the short antisense compounds of the nucleotide 531-553 of targeting SEQ ID NO:9 is selected from Isis No 327140,327141,327142,327143,327144,327145,327146,327147,327148 or 327149.
In certain embodiments, the target zone is the nucleotide 545-567 of SEQ ID NO:9.In certain embodiments, lack the nucleotide 545-567 of antisense compounds targeting SEQ ID NO:9.In some this embodiment, the short antisense compounds of targeted nucleotide 545-567 comprises the nucleotide sequence that is selected from SEQ ID NO 508,509,510,511,512,513,514,515,516 or 517.In some this embodiment, the short antisense compounds of the nucleotide 545-567 of targeting SEQ ID NO:9 is selected from Isis No 327150,327151,327152,327153,327154,327155,327156,327157,327158 or 327159.
In certain embodiments, the target zone is the nucleotide 531-567 of SEQ ID NO:9.In certain embodiments, lack the nucleotide 531-567 of antisense compounds targeting SEQ ID NO:9.In some this embodiment, the short antisense compounds of targeted nucleotide 531-567 comprises the nucleotide sequence that is selected from SEQ ID NO 498,499,500,501,502,503,504,505,506,507,508,509,510,511,512,513,514,515,516 or 517.In some this embodiment, the short antisense compounds of the nucleotide 531-567 of targeting SEQ ID NO:9 is selected from Isis No 327140,327141,327142,327143,327144,327145,327146,327147,327148,327149,327150,327151,327152,327153,327154,327155,327156,327157,327158 or 327159.
In certain embodiments, the target zone is the nucleotide 684-714 of SEQ ID NO:9.In certain embodiments, lack the nucleotide 684-714 of antisense compounds targeting SEQ ID NO:9.In some this embodiment, the short antisense compounds of targeted nucleotide 684-714 comprises the nucleotide sequence that is selected from SEQ ID NO 518,520,521,522,523,524,525,526,527,528,529,530,531,532,533,534,535 or 536.In some this embodiment, the short antisense compounds of the nucleotide 684-714 of targeting SEQ ID NO:9 is selected from Isis No 345897,327160,327161,327162,327163,327164,327165,327166,327167,327168,327169,327170,327171,327172,327173,327174,327175,327176 or 327177.
In certain embodiments, the target zone is the nucleotide 869-891 of SEQ ID NO:9.In certain embodiments, lack the nucleotide 869-891 of antisense compounds targeting SEQ ID NO:9.In some this embodiment, the short antisense compounds of targeted nucleotide 869-891 comprises the nucleotide sequence that is selected from SEQ ID NO 537,538,539,540,541,542,543,544,545 or 546.In some this embodiment, the short antisense compounds of the nucleotide 869-891 of targeting SEQ ID NO:9 is selected from Isis No 327178,327179,327180,327181,327182,327183,327184,327185,327186 or 327187.
In certain embodiments, the target zone is the nucleotide 955-977 of SEQ ID NO:9.In certain embodiments, lack the nucleotide 955-977 of antisense compounds targeting SEQ ID NO:9.9. in some this embodiment, the short antisense compounds of targeted nucleotide 955-977 comprises the nucleotide sequence that is selected from SEQ ID NO 547,548,549,550,551,552,553,554,555 or 556.In some this embodiment, the short antisense compounds of the nucleotide 955-977 of targeting SEQ IDNO:9 is selected from Isis No 327188,327189,327190,327191,327192,327193,327194,327195,327196 or 327197.
In certain embodiments, the target zone is the nucleotide 1019-1041 of SEQ ID NO:9.In certain embodiments, lack the nucleotide 1019-1041 of antisense compounds targeting SEQ ID NO:9.In some this embodiment, the short antisense compounds of targeted nucleotide 1019-1041 comprises the nucleotide sequence that is selected from SEQ ID NO 557,558,559,560,561,562,563,564,565 or 566.In some this embodiment, the short antisense compounds of the nucleotide 1019-1041 of targeting SEQ ID NO:9 is selected from Isis No327198,327199,327200,327201,327202,327203,327204,327205,327206 or 327207.
In certain embodiments, the target zone is the nucleotide 1160-1175 of SEQ ID NO:9.In certain embodiments, lack the nucleotide 1160-1175 of antisense compounds targeting SEQ ID NO:9.In some this embodiment, the short antisense compounds of targeted nucleotide 1160-1175 comprises the nucleotide sequence that is selected from SEQ ID NO 567 or 568.In some this embodiment, the short antisense compounds of the nucleotide 1160-1175 of targeting SEQ ID NO:9 is selected from Isis No 338491 or 338562.
In certain embodiments, the target zone is the nucleotide 1307-1377 of SEQ ID NO:9.In certain embodiments, lack the nucleotide 1307-1377 of antisense compounds targeting SEQ ID NO:9.In some this embodiment, the short antisense compounds of targeted nucleotide 1307-1377 comprises the nucleotide sequence that is selected from SEQ ID NO 569,570,571,572 or 573.In some this embodiment, the short antisense compounds of the nucleotide 1307-1377 of targeting SEQ ID NO:9 is selected from Isis No 338498,338569,338499,338570 or 385067.
In certain embodiments, the target zone is the nucleotide 1307-1414 of SEQ ID NO:9.In certain embodiments, lack the nucleotide 1307-1414 of antisense compounds targeting SEQ ID NO:9.In some this embodiment, the short antisense compounds of targeted nucleotide 1307-1414 comprises the nucleotide sequence that is selected from SEQ ID NO 569,570,571,572,573 or 574.In some this embodiment, the short antisense compounds of the nucleotide 1307-1414 of targeting SEQ ID NO:9 is selected from Isis No 338498,338569,338499,338570,385067 or 338573.
In certain embodiments, its length of short antisense compounds of targeting GCGR nucleic acid is 8-16, preferred 9-15, more preferably 9-14, more preferably 10-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting GCGR nucleic acid is 9-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting GCGR nucleic acid is 10-14 nucleotide.In certain embodiments, this short antisense compounds is short antisense oligonucleotide.
In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid is short gapmer.In some this embodiment, comprise at least one high-affinity in the short gapmer of targeting GCGR nucleic acid one or more pterions therein and modify.In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid comprises 1-3 high-affinity modification in each pterion.In some this embodiment, the nucleoside in pterion or nucleotide comprise 2 ' and modify.In some this embodiment, the monomer in pterion is BNA.In some this embodiment, the monomer in pterion is selected from α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA, β-D-methylene oxygen base (4 '-CH2-O-2 ') BNA, ethyleneoxy group (4 '-(CH2)2-O-2 ') BNA, amino oxygen base (4 '-CH2-O-N (R)-2 ') BNA and oxygen base amino (4 '-CH2-N (R)-O-2 ') BNA.In certain embodiments, the monomer in pterion comprises in 2 ' position and is selected from following substituent group: pi-allyl, amino, azido, thio group, O-pi-allyl, O-C1-C10Alkyl ,-OCF3, O-(CH2)2-O-CH3, 2 '-O (CH2)2SCH3, O-(CH2)2-O-N (Rm) (Rn) and O-CH2-C (=O)-N (Rm) (Rn), each R whereinmAnd RnIndependent is H or substituted or unsubstituted C1-C10Alkyl.In certain embodiments, the monomer in pterion is 2 ' MOE nucleotide.
In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid comprises between 5 ' pterion and 3 ' pterion at interval.In certain embodiments, comprise 5,6,7,8,9,10,11,12,13 or 14 monomers at interval.In certain embodiments, Jian Ge monomer is not modified deoxyribonucleotide.In certain embodiments, Jian Ge monomer is not modified ribonucleotide.In certain embodiments, modify (if any) at interval and cause producing such antisense compounds, when in conjunction with its target nucleic acids, this chemical compound can be supported the cutting of RNA enzyme (including but not limited to RNA enzyme H).
In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid has the same Dan Julian key.In some this embodiment, these keys all are that thiophosphate connects key.In certain embodiments, Lian Jian is that di-phosphate ester connects key.In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid has mixed matrix.
In certain embodiments, its length of short antisense compounds of targeting GCGR nucleic acid is 8 monomers.In certain embodiments, its length of short antisense compounds of targeting GCGR nucleic acid is 9 monomers.In certain embodiments, its length of short antisense compounds of targeting GCGR nucleic acid is 10 monomers.In certain embodiments, its length of short antisense compounds of targeting GCGR nucleic acid is 11 monomers.In certain embodiments, its length of short antisense compounds of targeting GCGR nucleic acid is 12 monomers.In certain embodiments, its length of short antisense compounds of targeting GCGR nucleic acid is 13 monomers.In certain embodiments, its length of short antisense compounds of targeting GCGR nucleic acid is 14 monomers.In certain embodiments, its length of short antisense compounds of targeting GCGR nucleic acid is 15 monomers.In certain embodiments, its length of short antisense compounds of targeting GCGR nucleic acid is 16 monomers.In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid comprises 9-15 monomer.In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid comprises 10-15 monomer.In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid comprises 12-14 monomer.In certain embodiments, the short antisense compounds of targeting GCGR nucleic acid comprises 12-14 nucleotide or nucleoside.
In certain embodiments, the invention provides the method for the expression of regulating GCGR.In certain embodiments, this method comprises the short antisense compounds that uses one or more targeting GCGR nucleic acid, and wherein the short antisense compounds of this targeting GCGR nucleic acid is about 8 to about 16, preferably 9-15, more preferably 9-14, more preferably 10-14 monomer (promptly about 8 monomer to about 16 connections).Those of ordinary skills will appreciate that, this comprises the method that the short antisense compounds that uses one or more 8,9,10,11,12,13,14,15 or 16 monomeric targeting GCGR nucleic acid is regulated the expression of GCGR.
In certain embodiments, the method for adjusting GCGR comprises that using length is the short antisense compounds of 8 monomeric targeting GCGR nucleic acid.In certain embodiments, the method for adjusting GCGR comprises that using length is the short antisense compounds of 9 monomeric targeting GCGR nucleic acid.In certain embodiments, the method for adjusting GCGR comprises that using length is the short antisense compounds of 10 monomeric targeting GCGR nucleic acid.In certain embodiments, the method for adjusting GCGR comprises that using length is the short antisense compounds of 11 monomeric targeting GCGR nucleic acid.In certain embodiments, the method for adjusting GCGR comprises that using length is the short antisense compounds of 12 monomeric targeting GCGR nucleic acid.In certain embodiments, the method for adjusting GCGR comprises that using length is the short antisense compounds of 13 monomeric targeting GCGR nucleic acid.In certain embodiments, the method for adjusting GCGR comprises that using length is the short antisense compounds of 14 monomeric targeting GCGR nucleic acid.In certain embodiments, the method for adjusting GCGR comprises that using length is the short antisense compounds of 15 monomeric targeting GCGR nucleic acid.In certain embodiments, the method for adjusting GCGR comprises that using length is the short antisense compounds of 16 monomeric targeting GCGR nucleic acid.
In certain embodiments, the method for the expression of adjusting GCGR comprises that use comprises the short antisense compounds of 9-15 monomeric targeting GCGR nucleic acid.In certain embodiments, the method for the expression of adjusting GCGR comprises that use comprises the short antisense compounds of 10-15 monomeric targeting GCGR nucleic acid.In certain embodiments, the method for the expression of adjusting GCGR comprises that use comprises the short antisense compounds of 12-14 monomeric targeting GCGR nucleic acid.In certain embodiments, the method for the expression of adjusting GCGR comprises the short antisense compounds that uses the targeting GCGR nucleic acid that comprises 12-14 nucleotide or nucleoside.
8.DGAT2
DG transferring enzyme 2 (also claims DGAT2, DG O-transferring enzyme 2, acetyl-CoA: DG Acetylase 2) be proved and relate to the absorption process of triglyceride (also claiming triacylglycerol) from food.
Triglyceride is a very efficient process from the absorption of food, and it is undertaken by series of steps, meals triacylglycerol hydrolysis in enteric cavity in these steps, then in the middle of enterocyte by resynthesis.The resynthesis of triacylglycerol can be undertaken by the monoacylglycerol approach, and this approach is by monoacylglycerol acyltransferase (MGAT) catalysis diacylglycerol synthetic from monoacylglycerol and fatty acyl group-CoA.The alternative synthetic method of DG is provided by the phosphoglycerol approach, and this approach relates to bimolecular fatty acyl group-CoA and glycerol-3-phosphate coupling.In arbitrary situation, acidylate all takes place with the fatty acyl group-CoA of another molecule in DG then in by the catalytic reaction of one of two kinds of diacylglycerol acyltransferases, forms triglyceride (Farese et al.; Curr.Opin.Lipidol.; 2000,11,229-234).
By the catalytic reaction of diacylglycerol acyltransferase is the last and unique critical step of triglyceride in synthetic.Thus, diacylglycerol acyltransferase relates to the fat storage in intestinal fat absorption, lipoprotein assembling, plasma triglyceride concentration adjusting and the adipose cell.First kind of diacylglycerol acyltransferase is that DG transferring enzyme 1 was identified in nineteen sixty, encode this proteinic people and little musculus cdna separated (Cases et al., Proc.Natl.Acad.Sci.U.S.A., 1998 in 1998,95,13018-13023; Oelkers et al., J.Biol.Chem., 1998,273,26765-26771).The mice that lacks diacylglycerol acyltransferase 1 can survive, and still can pass through other biological approach synthetic glycerine three esters, this prompting exist multiple triglyceride synthesis mechanism (Smith et al., Nat.Genet., 2000,25,87-90).
Second kind of DG transferring enzyme is that DG transferring enzyme 2 (also claims DGAT2, DG O-transferring enzyme 2, acyl group-CoA: diacylglycerol acyltransferase 2) identify (Cases et al. subsequently in fungus Mortierella (Mortierella), people and mice, J.Biol.Chem., 2001,276,38870-38876; Lardizabal et al., J.Biol.Chem., 2001,276,38862-38869).Enzymatic determination shows that this protein of identifying recently has the DG transferase active really, this activity can utilize multiple long-chain fat acyl group-CoA substrate (Cases et al., J.Biol.Chem., 2001,276,38870-38876).
DG transferring enzyme 2 is members of the family of the irrelevant gene of its sequence and DG transferring enzyme 1.Except compare with DG transferring enzyme 1 on sequence different; external test proves that also DG transferring enzyme 2 has higher activity (Cases et al., J.Biol.Chem., 2001 under the magnesium chloride of low concentration and oleoyl-CoA; 276,38870-38876).The predicted protein matter sequence of DG transferring enzyme 2 contains the potential N-of at least one membrane spaning domain of inferring, three and connects glycosylation site, six total sites of potential Protein kinase C phosphorylation and infer the common sequence in phosphoglycerol site (Cases et al. in the acyltransferase with being present in; J.Biol.Chem.; 2001; 276,38870-38876).International radiation hybridization collection of illustrative plates committee (International RadiationHybrid Mapping Consortium) navigates to chromosome 11q13.3 with people's DG transferring enzyme 2.
In people tissue, in liver and white adipose tissue, detect the DG transferring enzyme 2 of top level, in mammary gland, testis and peripheral blood leucocyte level lower (Cases et al., J.Biol.Chem., 2001,276,38870-38876).In people's tissue, detect two kinds of mRNA of 2.4 and 1.8 kilobase, and the main DG transferring enzyme 2mRNA in the mouse tissue is 2.4 kilobase.Except liver and white adipose tissue; DG transferring enzyme 2 is also expressed in all sections of mouse small intestine; wherein in near-end intestinal (proximalintestine), express higher; in distal gut (distal intstine), express lower (Cases etal.; J.Biol.Chem.; 2001,276,38870-38876).
In the postnatal development process of rat liver, the DG transferase active demonstrates unique pattern.Because mRNA expresses and active pattern between do not have dependency, post translational modification may participate in DG transferring enzyme 2 active adjustings in the rat growth course (Waterman et al., J.Lipid.Res., 2002,43,1555-1562).
DG transferring enzyme 2mRNA preferentially raises by insulinize; this active external test of DG (Meegalla et al. that is confirmed by the cell membrane part of the mice adipose cell of measure cultivating; Biochem.Biophys.Res.Commun.; 2002; 298,317-323).In the mice of fasting, DG transferring enzyme 2 is expressed and is greatly reduced, and sharply increases during feeding once more.These two kinds of acetyl-CoA carboxylase and fatty acid synthase participate in the synthetic enzyme of fatty acid, and its expression pattern responds fasting and feeding more in a similar manner.These results are in conjunction with this observed result of DG transferring enzyme 2 expressed in abundance in liver; prompting DG transferring enzyme 2 and endogenous fatty acid route of synthesis be closely connected (Meegalla etal., Biochem.Biophys.Res.Commun., 2002; 298,317-323).
Provide such evidence to the research that has destructive mice in diacylglycerol acyltransferase 1 gene, promptly diacylglycerol acyltransferase 2 helps triglyceride synthetic.Intestinal in wild-type mice and DG transferring enzyme 1 deficient mice is in each stage, DG transferring enzyme 2mRNA expression levels similar (Buhman et al., J.Biol.Chem., 2002,277,25474-25479).Use magnesium chlorides such as Buhman are distinguished DG transferring enzyme 1 and 2 activity; observe in DG transferring enzyme 1 deficient mice; the DG transferase active is reduced to 50% in the near-end intestinal; in distal gut, be reduced to 10-15% (Buhman et al.; J.Biol.Chem.; 2002,277,25474-25479).
In addition, in the liver or fatty tissue of DG transferring enzyme 1 deficient mice, even behind the high fat diet in several weeks, DG transferring enzyme 2mRNA level is not raised (Cases et al., J.Biol.Chem., 2001 yet, 276,38870-38876; Chen etal., J.Clin.Invest., 2002,109,1049-1055).But; in ob/ob mice (it has the sudden change that can cause fat disease in the leptin gene); DG transferring enzyme 2 is than there being the more expression of height in wild-type mice, this prompting DG transferring enzyme 2 may cause the liparitosis that existing height accumulates in these mices on the part.In addition; the combinatorial mutagenesis of leptin and DG transferring enzyme 1; the level that can cause DG transferring enzyme 2 in the white adipose tissue to be expressed in the homologue with DG transferring enzyme 1 deficient mice is compared three times of (the Chen et al. that raise; J.Clin.Invest.; 2002; 109,1049-1055).DG transferring enzyme 2mRNA also in the skin of these mices, obtain raising (Chen et al., J.Clin.Invest., 2002,109,175-181).These Notes of Key Datas; leptin can be reduced DG transferring enzyme 2 usually and express; and the rise of DG transferring enzyme 2 in the white adipose tissue of these mices can give the triglyceride that still appears in leptin deficiency/DG transferring enzyme 1 deficient mice synthetic approach (the Chen et al. that alternative is provided; J.Clin.Invest.; 2002; 109,1049-1055).
Diacylglycerol acyltransferase 1 is rejected mice and is demonstrated attractive Phenotype, and promptly they are very lean, can resist the inductive obesity of meals, and the tissue triglycerides level reduces, to the sensitivity raising of insulin and leptin.Because it is synthetic that DG transferring enzyme 2 also participates in triglyceride, also can cause body fat content to reduce similarly to the interference of DG transferring enzyme 2.
Definition
" DGAT2 " means its expression and treats by lacking gene outcome or the protein that antisense compounds is regulated.
" DGAT2 nucleic acid " means the nucleic acid of any encoding D GAT2.For example, RNA sequence that in certain embodiments, DGAT2 nucleic acid includes but not limited to the DNA sequence of encoding D GAT2, transcribe from the DNA of encoding D GAT2 and the mRNA sequence of encoding D GAT2." DGAT2 mRNA " means the mRNA of encoding D GAT2.
The treatment indication
Antisense technology is to reduce the effective means that DGAT2 expresses, and has been proved to be in multiple therapeutic, diagnosis type and the application of research property to have unique applications.Thus, in certain embodiments, the invention provides targeting encoding D GAT2 nucleic acid, can regulate the short antisense compounds of the expression of DGAT2.This paper provides in addition and can effectively suppress the short antisense compounds that DGAT2 expresses.
In certain embodiments, the short antisense compounds of the nucleic acid by giving one or more targeting encoding D GAT2 is treated and is suspected the experimenter who suffers from DGAT2 diseases associated or disease.For example, in non-limiting embodiments, this abundant short antisense compounds of will treat effective dose that comprises gives the step of this animal.In some this embodiment, short antisense compounds can effectively suppress the active of DGAT2 or suppress the expression of DGAT2.In one embodiment, the active or expression of DGAT2 in the experimenter is suppressed at least 10%, at least 20%, at least 25%, at least 30%, at least 40%, at least 50%, at least 60%, at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 98%, at least 99% and at least 100%.In certain embodiments, the active or expression of DGAT2 in the experimenter is suppressed about 30%.More preferably, the active or expression of DGAT2 in the experimenter is suppressed 50% or more.
The reduction of the expression of DGAT2 can for example be measured in blood, blood plasma, serum, fatty tissue, liver or any other body fluid, tissue or the organ of this animal.Preferably, the central contained cell of this analyzed fluid, tissue or organ contains nucleic acid and/or the DGAT2 albumen itself of encoding D GAT2.
In certain embodiments, also provide medicine and other compositionss that comprise The compounds of this invention.For example, the short antisense compounds of targeting DGAT2 nucleic acid can be added to suitable medicine by certain chemical compound with effective dose can accept diluent or carrier, uses in pharmaceutical composition.
The short antisense compounds of some targeting DGAT2 can have short antisense compounds characteristic or feature any or that multiple this paper summarized.In certain embodiments, the short antisense compounds of targeting DGAT2 nucleic acid has and is selected from following die body (pterion-deoxidation interval-pterion): 1-12-1,1-1-10-2,2-10-1-1,3-10-3,2-10-3,2-10-2,1-10-1,1-10-2,3-8-3,2-8-2,1-8-1,3-6-3 or 1-6-1.In certain embodiments, the short antisense compounds of targeting DGAT2 nucleic acid has and is selected from following die body (pterion-deoxidation interval-pterion): 1-10-1,2-10-2 and 3-10-3.
This paper provides by short antisense compounds that gives one or more targeting DGAT2 nucleic acid or the pharmaceutical composition that comprises this chemical compound and treats individual method.Also provide by the short antisense compounds that gives targeting DGAT2 nucleic acid and treat the method for suffering from the experimenter of active diseases associated of DGAT2 or disease.Include but not limited to cardiovascular disease, obesity, diabetes, hypercholesterolemia and liver steatosis with DGAT2 diseases associated or disease.
The short antisense compounds of some targeting DGAT2 nucleic acid
In certain embodiments, lacking the antisense compounds targeting has
Figure A20078002541601781
The DGAT2 nucleic acid of the sequence of searching number NM_032564.2 (being incorporated herein) with SEQ ID NO:10.
In some this embodiment, short antisense compounds and the SEQID NO:10 of targeting SEQ ID NO:10 have at least 90% complementarity.In some this embodiment, the short antisense compounds of targeting SEQ IDNO:10 and SEQ ID NO:10 have at least 95% complementarity.In some this embodiment, short antisense compounds and the SEQ IDNO:10 of targeting SEQ ID NO:10 have 100% complementarity.In certain embodiments, the short antisense compounds of targeting SEQ ID NO:10 comprises the nucleotide sequence that is selected from the nucleotide sequence that provides in table 14 and 15.
The nucleotide sequence that each SEQ ID NO provides in the table 14 and 15 is independent of any to connecting the modification of key or nuclear base between sugar moieties, nucleoside.Thus, the short antisense compounds that comprises the nucleotide sequence that provides in table 14 and 15 can comprise one or more to connecting the modification of key or nuclear base between sugar moieties, nucleoside independently.Isis number (Isis NO.) described antisense compounds represented the nuclear base sequence with one or more to connecting key between sugar moieties, nucleoside or examining the combination of the modification of base.
Table 14 and 15 has been enumerated the example of the short antisense compounds of targeting SEQ ID NO:10.Table 14 has been enumerated the short antisense compounds that 100% complementarity is arranged with SEQ ID NO:10.Table 15 has been enumerated the short antisense compounds that has one or two mispairing with respect to SEQ ID NO:10.The file that is marked with " gapmer die body " is represented the pterion of each short antisense compounds-at interval-pterion die body.Spacer segment comprises 2 '-deoxyribonucleotide, and each nucleotide of each pterion section comprises the sugar through 2 '-modification.The concrete sugar through 2 '-modification is also represented in " gapmer die body " file.For example, " 2-10-2 MOE " means 2-10-2 gapmer die body, and wherein the spacer segment both sides of 10 2 '-deoxyribonucleotides are connected to the pterion section of 2 nucleotide, and wherein the nucleotide of pterion section is 2 '-MOE nucleotide.Connecting key between nucleoside is thiophosphate.Short antisense compounds comprises the 5-methylcytidine that substitutes not modified cytosine, unless show " not modified cytosine " in the gapmer die body file, represented in this case cytosine is not modified cytosine.For example, " 5-mC is only in the interval " expression spacer segment has the 5-methylcytidine, and the pterion section has not modified cytosine.
Table 14: the short antisense compounds of targeting SEQ ID NO:10
ISIS NO.5 ' target site3 ' target siteSequence (5 '-3 ')The Gapmer die body SEQ ID NO
372556 231 244 ATGAGGGTCTTCAT 2-10-2 MOE 681
372557 249 262 ACCCCGGAGTAGGC 2-10-2 MOE 682
382601 249 260 CCCGGAGTAGGC 1-10-1 MOE 683
372480 251 266 CAGGACCCCGGAGTAG 3-10-3 MOE 684
372481 252 267 GCAGGACCCCGGAGTA 3-10-3 MOE 685
372558 252 265 AGGACCCCGGAGTA 2-10-2 MOE 686
372559 253 266 CAGGACCCCGGAGT 2-10-2 MOE 687
382603 331 342 CAGACCCCTCGC 1-10-1 MOE 688
382604 361 372 AGAGGATGCTGG 1-10-1 MOE 689
372485 392 407 GAGCCAGGTGACAGAG 3-10-3 MOE 690
372563 393 406 AGCCAGGTGACAGA 2-10-2 MOE 691
382605 397 408 TGAGCCAGGTGA 1-10-1 MOE 692
372565 414 427 TTTTCCACCTTGGA 2-10-2 MOE 693
382606 482 493 CTGCAGGCCACT 1-10-1 MOE 694
372497 651 666 TCACCAGCTGGATGGG 3-10-3 MOE 695
372498 652 667 TTCACCAGCTGGATGG 3-10-3 MOE 696
372575 652 665 CACCAGCTGGATGG 2-10-2 MOE 697
372576 653 666 TCACCAGCTGGATG 2-10-2 MOE 698
382607 655 666 TCACCAGCTGGA 1-10-1 MOE 699
372499 656 671 TGTCTTCACCAGCTGG 3-10-3 MOE 700
372577 657 670 GTCTTCACCAGCTG 2-10-2 MOE 701
372500 659 674 GTGTGTCTTCACCAGC 3-10-3 MOE 702
372578 660 673 TGTGTCTTCACCAG 2-10-2 MOE 703
372501 661 676 TTGTGTGTCTTCACCA 3-10-3 MOE 704
372579 662 675 TGTGTGTCTTCACC 2-10-2 MOE 705
372502 664 679 AGGTTGTGTGTCTTCA 3-10-3 MOE 706
372580 665 678 GGTTGTGTGTCTTC 2-10-2 MOE 707
372503 666 681 GCAGGTTGTGTGTCTT 3-10-3 MOE 708
372581 667 680 CAGGTTGTGTGTCT 2-10-2 MOE 709
372504 669 684 TCAGCAGGTTGTGTGT 3-10-3 MOE 710
372582 670 683 CAGCAGGTTGTGTG 2-10-2 MOE 711
372505 671 686 GGTCAGCAGGTTGTGT 3-10-3 MOE 712
372506 672 687 TGGTCAGCAGGTTGTG 3-10-3 MOE 713
372583 672 685 GTCAGCAGGTTGTG 2-10-2 MOE 714
372584 673 686 GGTCAGCAGGTTGT 2-10-2 MOE 715
372507 676 691 CTGGTGGTCAGCAGGT 3-10-3 MOE 716
372585 677 690 TGGTGGTCAGCAGG 2-10-2 MOE 717
382608 680 691 CTGGTGGTCAGC 1-10-1 MOE 718
372508 681 696 AGTTCCTGGTGGTCAG 3-10-3 MOE 719
372586 682 695 GTTCCTGGTGGTCA 2-10-2 MOE 720
372509 684 699 TATAGTTCCTGGTGGT 3-10-3 MOE 721
372587 685 698 ATAGTTCCTGGTGG 2-10-2 MOE 722
372510 686 701 GATATAGTTCCTGGTG 3-10-3 MOE 723
372588 687 700 ATATAGTTCCTGGT 2-10-2 MOE 724
372511 691 706 CCAAAGATATAGTTCC 3-10-3 MOE 725
372512 692 707 TCCAAAGATATAGTTC 3-10-3 MOE 726
372589 692 705 CAAAGATATAGTTC 2-10-2 MOE 727
372590 693 706 CCAAAGATATAGTT 2-10-2 MOE 728
382609 724 735 CCAGGCCCATGA 1-10-1 MOE 729
372514 725 740 GGCACCCAGGCCCATG 3-10-3 MOE 730
372592 726 739 GCACCCAGGCCCAT 2-10-2 MOE 731
372515 730 745 CAGAAGGCACCCAGGC 3-10-3 MOE 732
372593 731 744 AGAAGGCACCCAGG 2-10-2 MOE 733
382610 851 862 CCAGACATCAGG 1-10-1 MOE 734
382611 867 878 GACAGGGCAGAT 1-10-1 MOE 735
382602 868 879 TGACAGGGCAGA 1-10-1 MOE 736
382612 911 922 CCACTCCCATTC 1-10-1 MOE 737
372524 965 980 GCCAGGCATGGAGCTC 3-10-3 MOE 738
372602 966 979 CCAGGCATGGAGCT 2-10-2 MOE 739
382613 968 979 CCAGGCATGGAG 1-10-1 MOE 740
382614 987 998 CAGGGTGACTGC 1-10-1 MOE 741
372525 989 1004 GTTCCGCAGGGTGACT 3-10-3 MOE 742
372603 990 1003 TTCCGCAGGGTGAC 2-10-2 MOE 743
372526 992 1007 GCGGTTCCGCAGGGTG 3-10-3 MOE 744
372604 993 1006 CGGTTCCGCAGGGT 2-10-2 MOE 745
372530 1106 1121 TCGGCCCCAGGAGCCC 3-10-3 MOE 746
372608 1107 1120 CGGCCCCAGGAGCC 2-10-2 MOE 747
372531 1109 1124 CCATCGGCCCCAGGAG 3-10-3 MOE 748
372609 1110 1123 CATCGGCCCCAGGA 2-10-2 MOE 749
372532 1112 1127 GACCCATCGGCCCCAG 3-10-3 MOE 750
372610 1113 1126 ACCCATCGGCCCCA 2-10-2 MOE 751
372533 1117 1132 TTCTGGACCCATCGGC 3-10-3 MOE 752
382615 1117 1128 GGACCCATCGGC 1-10-1 MOE 753
372611 1118 1131 TCTGGACCCATCGG 2-10-2 MOE 754
372536 1199 1214 CACCAGCCCCCAGGTG 3-10-3 MOE 755
372614 1200 1213 ACCAGCCCCCAGGT 2-10-2 MOE 756
372537 1204 1219 TAGGGCACCAGCCCCC 3-10-3 MOE 757
372615 1205 1218 AGGGCACCAGCCCC 2-10-2 MOE 758
372538 1209 1224 TGGAGTAGGGCACCAG 3-10-3 MOE 759
372616 1210 1223 GGAGTAGGGCACCA 2-10-2 MOE 760
382616 1215 1226 CTTGGAGTAGGG 1-10-1 MOE 761
372539 1218 1233 TGATGGGCTTGGAGTA 3-10-3 MOE 762
372617 1219 1232 GATGGGCTTGGAGT 2-10-2 MOE 763
372540 1293 1308 TGTGGTACAGGTCGAT 3-10-3 MOE 764
372618 1294 1307 GTGGTACAGGTCGA 2-10-2 MOE 765
382617 1294 1305 GGTACAGGTCGA 1-10-1 MOE 766
372541 1295 1310 GGTGTGGTACAGGTCG 3-10-3 MOE 767
372619 1296 1309 GTGTGGTACAGGTC 2-10-2 MOE 768
372542 1298 1313 CATGGTGTGGTACAGG 3-10-3 MOE 769
372620 1299 1312 ATGGTGTGGTACAG 2-10-2 MOE 770
372543 1300 1315 TACATGGTGTGGTACA 3-10-3 MOE 771
372621 1301 1314 ACATGGTGTGGTAC 2-10-2 MOE 772
372544 1303 1318 ATGTACATGGTGTGGT 3-10-3 MOE 773
372622 1304 1317 TGTACATGGTGTGG 2-10-2 MOE 774
382618 1313 1324 GCCTCCATGTAC 1-10-1 MOE 775
382619 1325 1336 AGCTTCACCAGG 1-10-1 MOE 776
382620 1383 1394 GTTCACCTCCAG 1-10-1 MOE 777
Table 15: targeting SEQ ID NO:10 and have the short antisense compounds of 1 or 2 mispairing
ISIS NO5 ' target site3 ' target siteSequence (5 '-3 ')The Gapmer die body SEQ ID NO
372608 151 164 CGGCCCCAGGAGCC 2-10-2 MOE 747
372474 156 171 CATGCCCCAGCCGCCG 3-10-3 MOE 778
372552 157 170 ATGCCCCAGCCGCC 2-10-2 MOE 779
382609 167 178 CCAGGCCCATGA 1-10-1 MOE 729
372478 230 245 GATGAGGGTCTTCATG 3-10-3 MOE 780
372479 248 263 GACCCCGGAGTAGGCA 3-10-3 MOE 781
382611 317 328 GACAGGGCAGAT 1-10-1 MOE 735
372483 352 367 ATGCTGGAGCCAGTGC 3-10-3 MOE 782
372561 353 366 TGCTGGAGCCAGTG 2-10-2 MOE 783
372562 373 386 GTCTTGGAGGGCCG 2-10-2 MOE 784
382602 388 399 TGACAGGGCAGA 1-10-1 MOE 736
372613 392 405 CCCAGGTGTCAGAG 2-10-2 MOE 785
372486 412 427 TTTTCCACCTTGGATC 3-10-3 MOE 786
372564 413 426 TTTCCACCTTGGAT 2-10-2 MOE 787
372487 413 428 TTTTTCCACCTTGGAT 3-10-3 MOE 788
372488 418 433 AGGTGTTTTTCCACCT 3-10-3 MOE 789
372566 419 432 GGTGTTTTTCCACC 2-10-2 MOE 790
372489 459 474 CCAGGAAGGATAGGAC 3-10-3 MOE 791
372567 460 473 CAGGAAGGATAGGA 2-10-2 MOE 792
382612 475 486 CCACTCCCATTC 1-10-1 MOE 737
372490 483 498 TGACACTGCAGGCCAC 3-10-3 MOE 793
372568 484 497 GACACTGCAGGCCA 2-10-2 MOE 794
372491 492 507 ACATGAGGATGACACT 3-10-3 MOE 795
372569 493 506 CATGAGGATGACAC 2-10-2 MOE 796
372492 503 518 GCAGAAGGTGTACATG 3-10-3 MOE 797
372570 504 517 CAGAAGGTGTACAT 2-10-2 MOE 798
372493 512 527 GCAGTCAGTGCAGAAG 3-10-3 MOE 799
372571 513 526 CAGTCAGTGCAGAA 2-10-2 MOE 800
372496 612 627 ACACGGCCCAGTTTCG 3-10-3 MOE 801
372574 613 626 CACGGCCCAGTTTC 2-10-2 MOE 802
372513 717 732 GGCCCATGATGCCATG 3-10-3 MOE 803
372591 718 731 GCCCATGATGCCAT 2-10-2 MOE 804
372516 732 747 TACAGAAGGCACCCAG 3-10-3 MOE 805
372594 733 746 ACAGAAGGCACCCA 2-10-2 MOE 806
372518 812 827 GAAGTTGCCAGCCAAT 3-10-3 MOE 807
372596 813 826 AAGTTGCCAGCCAA 2-10-2 MOE 808
372560 863 876 CAGGGCAGATCCTT 2-10-2 MOE 809
372519 887 902 CAAGTAGTCTATGGTG 3-10-3 MOE 810
372597 888 901 AAGTAGTCTATGGT 2-10-2 MOE 811
372520 894 909 TGGAAAGCAAGTAGTC 3-10-3 MOE 812
372598 895 908 GGAAAGCAAGTAGT 2-10-2 MOE 813
372527 1013 1028 GGCCAGCTTTACAAAG 3-10-3 MOE 814
372605 1014 1027 GCCAGCTTTACAAA 2-10-2 MOE 815
372606 1020 1033 CGCAGGGCCAGCTT 2-10-2 MOE 816
372529 1052 1067 AAAGGAATAGGTGGGA 3-10-3 MOE 817
372607 1053 1066 AAGGAATAGGTGGG 2-10-2 MOE 818
372534 1144 1159 GCGAAACCAATATACT 3-10-3 MOE 819
372612 1145 1158 CGAAACCAATATAC 2-10-2 MOE 820
372535 1192 1207 CCCCAGGTGTCAGAGG 3-10-3 MOE 821
372613 1193 1206 CCCAGGTGTCAGAG 2-10-2 MOE 822
372545 1332 1347 GATTGTCAAAGAGCTT 3-10-3 MOE 823
372623 1333 1346 ATTGTCAAAGAGCT 2-10-2 MOE 824
372546 1342 1357 TTGGTCTTGTGATTGT 3-10-3 MOE 825
372624 1343 1356 TGGTCTTGTGATTG 2-10-2 MOE 826
372547 1352 1367 AAGGCCGAATTTGGTC 3-10-3 MOE 827
372625 1353 1366 AGGCCGAATTTGGT 2-10-2 MOE 828
382601 1617 1628 CCCGGAGTAGGC 1-10-1 MOE 683
382606 1971 1982 CTGCAGGCCACT 1-10-1 MOE 694
382612 1988 1999 CCACTCCCATTC 1-10-1 MOE 737
In certain embodiments, the target zone is the nucleotide 231-267 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 231-267 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 231-267 comprises the nucleotide sequence that is selected from SEQ ID NO 681,682,683,684,685,686 or 687.In some this embodiment, the short antisense compounds of the nucleotide 231-267 of targeting SEQ ID NO:10 is selected from Isis No 372556,372557,382601,372480,372481,372558 or 372559.
In certain embodiments, the target zone is the nucleotide 249-267 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 249-267 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 249-267 comprises the nucleotide sequence that is selected from SEQ ID NO 683,684,685,686 or 687.In some this embodiment, the short antisense compounds of the nucleotide 249-267 of targeting SEQ ID NO:10 is selected from Isis No 382601,372480,372481,372558 or 372559.
In certain embodiments, the target zone is the nucleotide 331-493 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 331-493 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 331-493 comprises the nucleotide sequence that is selected from SEQ ID NO 688,689,690,691,692,693 or 694.In some this embodiment, the short antisense compounds of the nucleotide 331-493 of targeting SEQ ID NO:10 is selected from Isis No 382603,382604,372485,372563,382605,372565 or 382606.
In certain embodiments, the target zone is the nucleotide 331-427 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 331-427 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 331-427 comprises the nucleotide sequence that is selected from SEQ ID NO 688,689,690,691,692 or 693.In some this embodiment, the short antisense compounds of the nucleotide 331-427 of targeting SEQ ID NO:10 is selected from Isis No 382603,382604,372485,372563,382605 or 372565.
In certain embodiments, the target zone is the nucleotide 392-408 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 392-408 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 392-408 comprises the nucleotide sequence that is selected from SEQ ID NO 690,691 or 692.In some this embodiment, the short antisense compounds of the nucleotide 392-408 of targeting SEQ ID NO:10 is selected from Isis No 372485,372563 or 382605.
In certain embodiments, the target zone is the nucleotide 651-707 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 651-707 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 651-707 comprises the nucleotide sequence that is selected from SEQ ID NO 695,696,697,698,699,700,701,702,703,704,705,706,707,708,709,710,711,712,713,714,715,716,717,718,719,720,721,722,723,724,725,726,727 or 728.In some this embodiment, the short antisense compounds of the nucleotide 651-707 of targeting SEQ ID NO:10 is selected from Isis No372497,372498,372575,372576,382607,372499,372577,372500,372578,372501,372579,372502,372580,372503,372581,372504,372582,372505,372506,372583,372584,372507,372585,382608,372508,372586,372509,372587,372510,372588,372511,372512,372589 or 372590.
In certain embodiments, the target zone is the nucleotide 724-745 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 724-745 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 724-745 comprises the nucleotide sequence that is selected from SEQ ID NO 729,730,731,732 or 733.In some this embodiment, the short antisense compounds of the nucleotide 724-745 of targeting SEQ ID NO:10 is selected from Isis No 382609,372514,372592,372515 or 372593.
In certain embodiments, the target zone is the nucleotide 651-745 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 651-745 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 651-745 comprises the nucleotide sequence that is selected from SEQ ID NO 695,696,697,698,699,700,701,702,703,704,705,706,707,708,709,710,711,712,713,714,715,716,717,718,719,720,721,722,723,724,725,726,727,728,729,730,731,732 or 733.In some this embodiment, the short antisense compounds of the nucleotide 651-745 of targeting SEQ ID NO:10 is selected from Isis No 372497,372498,372575,372576,382607,372499,372577,372500,372578,372501,372579,372502,372580,372503,372581,372504,372582,372505,372506,372583,372584,372507,372585,382608,372508,372586,372509,372587,372510,372588,372511,372512,372589,372590,382609,372514,372592,372515 or 372593.
In certain embodiments, the target zone is the nucleotide 851-922 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 851-922 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 851-922 comprises the nucleotide sequence that is selected from SEQ ID NO 734,735,736 or 737.In some this embodiment, the short antisense compounds of the nucleotide 851-922 of targeting SEQ ID NO:10 is selected from Isis No 382610,382611,382602 or 382612.
In certain embodiments, the target zone is the nucleotide 851-879 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 851-879 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 851-879 comprises the nucleotide sequence that is selected from SEQ ID NO 734,735 or 736.In some this embodiment, the short antisense compounds of the nucleotide 851-879 of targeting SEQ ID NO:10 is selected from Isis No 382610,382611 or 382602.
In certain embodiments, the target zone is the nucleotide 965-1007 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 965-1007 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 965-1007 comprises the nucleotide sequence that is selected from SEQ ID NO 738,739,740,741,742,743,744 or 745.In some this embodiment, the short antisense compounds of the nucleotide 965-1007 of targeting SEQ ID NO:10 is selected from Isis No 372524,372602,382613,382614,372525,372603,372526 or 372604.
In certain embodiments, the target zone is the nucleotide 965-979 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 965-979 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 965-979 comprises the nucleotide sequence that is selected from SEQ ID NO 738,739 or 740.In some this embodiment, the short antisense compounds of the nucleotide 965-979 of targeting SEQ ID NO:10 is selected from Isis No 372524,372602 or 382613.
In certain embodiments, the target zone is the nucleotide 987-1007 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 987-1007 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 987-1007 comprises the nucleotide sequence that is selected from SEQ ID NO 741,742,743,744 or 745.In some this embodiment, the short antisense compounds of the nucleotide 987-1007 of targeting SEQ ID NO:10 is selected from Isis No 382614,372525,372603,372526 or 372604.
In certain embodiments, the target zone is the nucleotide 1106-1132 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 1106-1132 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 1106-1132 comprises the nucleotide sequence that is selected from SEQ ID NO 746,747,748,749,750,751,752,753 or 754.In some this embodiment, the short antisense compounds of the nucleotide 1106-1132 of targeting SEQ IDNO:10 is selected from Isis No 372530,372608,372531,372609,372532,372610,372533,382615 or 372611.
In certain embodiments, the target zone is the nucleotide 1199-1233 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 1199-1233 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 1199-1233 comprises the nucleotide sequence that is selected from SEQ ID NO 755,756,757,758,759,760,761,762 or 763.In some this embodiment, the short antisense compounds of the nucleotide 1199-1233 of targeting SEQ IDNO:10 is selected from Isis No 372536,372614,372537,372615,372538,372616,382616,372539 or 372617.
In certain embodiments, the target zone is the nucleotide 1293-1394 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 1293-1394 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 1293-1394 comprises the nucleotide sequence that is selected from SEQ ID NO 764,765,766,767,768,769,770,771,772,773,774,775,776 or 777.In some this embodiment, the short antisense compounds of the nucleotide 1293-1394 of targeting SEQ ID NO:10 is selected from Isis No 372540,372618,382617,372541,372619,372542,372620,372543,372621,372544,372622,382618,382619 or 382620.
In certain embodiments, the target zone is the nucleotide 1293-1336 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 1293-1336 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 1293-1336 comprises the nucleotide sequence that is selected from SEQ ID NO 764,765,766,767,768,769,770,771,772,773,774,775 or 776.In some this embodiment, the short antisense compounds of the nucleotide 1293-1336 of targeting SEQ ID NO:10 is selected from Isis No 372540,372618,382617,372541,372619,372542,372620,372543,372621,372544,372622,382618 or 382619.
In certain embodiments, the target zone is the nucleotide 1293-1324 of SEQ ID NO:10.In certain embodiments, lack the nucleotide 1293-1324 of antisense compounds targeting SEQ ID NO:10.In some this embodiment, the short antisense compounds of targeted nucleotide 1293-1324 comprises the nucleotide sequence that is selected from SEQ ID NO 764,765,766,767,768,769,770,771,772,773,774 or 775.In some this embodiment, the short antisense compounds of the nucleotide 1293-1324 of targeting SEQ ID NO:10 is selected from Isis No 372540,372618,382617,372541,372619,372542,372620,372543,372621,372544,372622 or 382618.
In certain embodiments, its length of short antisense compounds of targeting DGAT2 nucleic acid is 8-16, preferred 9-15, more preferably 9-14, more preferably 10-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting DGAT2 nucleic acid is 9-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting DGAT2 nucleic acid is 10-14 nucleotide.In certain embodiments, this short antisense compounds is short antisense oligonucleotide.
In certain embodiments, the short antisense compounds of targeting DGAT2 nucleic acid is short gapmer.In some this embodiment, comprise at least one high-affinity in the short gapmer of targeting DGAT2 nucleic acid one or more pterions therein and modify.In certain embodiments, the short antisense compounds of targeting DGAT2 nucleic acid comprises 1-3 high-affinity modification in each pterion.In some this embodiment, the nucleoside in pterion or nucleotide comprise 2 ' and modify.In some this embodiment, the monomer in pterion is BNA.In some this embodiment, the monomer in pterion is selected from α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA, β-D-methylene oxygen base (4 '-CH2-O-2 ') BNA, ethyleneoxy group (4 '-(CH2)2-O-2 ') BNA, amino oxygen base (4 '-CH2-O-N (R)-2 ') BNA and oxygen base amino (4 '-CH2-N (R)-O-2 ') BNA.In certain embodiments, the monomer in pterion comprises in 2 ' position and is selected from following substituent group: pi-allyl, amino, azido, thio group, O-pi-allyl, O-C1-C10Alkyl ,-OCF3, O-(CH2)2-O-CH3, 2 '-O (CH2)2SCH3, O-(CH2)2-O-N (Rm) (Rn) and O-CH2-C (=O)-N (Rm) (Rn), each R whereinmAnd RnIndependent is H or substituted or unsubstituted C1-C10Alkyl.In certain embodiments, the monomer in pterion is 2 ' MOE nucleotide.
In certain embodiments, the short antisense compounds of targeting DGAT2 nucleic acid comprises between 5 ' pterion and 3 ' pterion at interval.In certain embodiments, comprise 5,6,7,8,9,10,11,12,13 or 14 monomers at interval.In certain embodiments, Jian Ge monomer is not modified deoxyribonucleotide.In certain embodiments, Jian Ge monomer is not modified ribonucleotide.In certain embodiments, modify (if any) at interval and cause producing such antisense compounds, when in conjunction with its target nucleic acids, this chemical compound can be supported the cutting of RNA enzyme (including but not limited to RNA enzyme H).
In certain embodiments, the short antisense compounds of targeting DGAT2 nucleic acid has the same Dan Julian key.In some this embodiment, these keys all are that thiophosphate connects key.In certain embodiments, Lian Jian is that di-phosphate ester connects key.In certain embodiments, the short antisense compounds of targeting DGAT2 nucleic acid has mixed matrix.
In certain embodiments, its length of short antisense compounds of targeting DGAT2 nucleic acid is 8 monomers.In certain embodiments, its length of short antisense compounds of targeting DGAT2 nucleic acid is 9 monomers.In certain embodiments, its length of short antisense compounds of targeting DGAT2 nucleic acid is 19 monomers.In certain embodiments, its length of short antisense compounds of targeting DGAT2 nucleic acid is 11 monomers.In certain embodiments, its length of short antisense compounds of targeting DGAT2 nucleic acid is 12 monomers.In certain embodiments, its length of short antisense compounds of targeting DGAT2 nucleic acid is 13 monomers.In certain embodiments, its length of short antisense compounds of targeting DGAT2 nucleic acid is 14 monomers.In certain embodiments, its length of short antisense compounds of targeting DGAT2 nucleic acid is 15 monomers.In certain embodiments, its length of short antisense compounds of targeting DGAT2 nucleic acid is 16 monomers.In certain embodiments, the short antisense compounds of targeting DGAT2 nucleic acid comprises 9-15 monomer.In certain embodiments, the short antisense compounds of targeting DGAT2 nucleic acid comprises 10-15 monomer.In certain embodiments, the short antisense compounds of targeting DGAT2 nucleic acid comprises 12-14 monomer.In certain embodiments, the short antisense compounds of targeting DGAT2 nucleic acid comprises 12-14 nucleotide or nucleoside.
In certain embodiments, the invention provides the method for the expression of regulating DGAT2.In certain embodiments, this method comprises the short antisense compounds that uses one or more targeting DGAT2 nucleic acid, and wherein the short antisense compounds of this targeting DGAT2 nucleic acid is about 8 to about 16, preferably 9-15, more preferably 9-14, more preferably 10-14 monomer (promptly about 8 monomer to about 16 connections).Those of ordinary skills will appreciate that, this comprises the method that the short antisense compounds that uses one or more 8,9,10,11,12,13,14,15 or 16 monomeric targeting DGAT2 nucleic acid is regulated the expression of DGAT2.
In certain embodiments, the method for adjusting DGAT2 comprises that using length is the short antisense compounds of 8 monomeric targeting DGAT2 nucleic acid.In certain embodiments, the method for adjusting DGAT2 comprises that using length is the short antisense compounds of 9 monomeric targeting DGAT2 nucleic acid.In certain embodiments, the method for adjusting DGAT2 comprises that using length is the short antisense compounds of 10 monomeric targeting DGAT2 nucleic acid.In certain embodiments, the method for adjusting DGAT2 comprises that using length is the short antisense compounds of 11 monomeric targeting DGAT2 nucleic acid.In certain embodiments, the method for adjusting DGAT2 comprises that using length is the short antisense compounds of 12 monomeric targeting DGAT2 nucleic acid.In certain embodiments, the method for adjusting DGAT2 comprises that using length is the short antisense compounds of 13 monomeric targeting DGAT2 nucleic acid.In certain embodiments, the method for adjusting DGAT2 comprises that using length is the short antisense compounds of 14 monomeric targeting DGAT2 nucleic acid.In certain embodiments, the method for adjusting DGAT2 comprises that using length is the short antisense compounds of 15 monomeric targeting DGAT2 nucleic acid.In certain embodiments, the method for adjusting DGAT2 comprises that using length is the short antisense compounds of 16 monomeric targeting DGAT2 nucleic acid.
In certain embodiments, the method for the expression of adjusting DGAT2 comprises that use comprises the short antisense compounds of 9-15 monomeric targeting DGAT2 nucleic acid.In certain embodiments, the method for the expression of adjusting DGAT2 comprises that use comprises the short antisense compounds of 10-15 monomeric targeting DGAT2 nucleic acid.In certain embodiments, the method for the expression of adjusting DGAT2 comprises that use comprises the short antisense compounds of 12-14 monomeric targeting DGAT2 nucleic acid.In certain embodiments, the method for the expression of adjusting DGAT2 comprises the short antisense compounds that uses the targeting DGAT2 nucleic acid that comprises 12-14 nucleotide or nucleoside.
9.PTP1B
PTP1B (also claiming protein phosphatase 1 B and PTPN1) is endoplasmic reticulum (ER) relevant enzyme, is as the main protein tyrosine phosphatase of people's Placenta Hominis separated (Tonks et al., J.Biol.Chem., 1988,263,6731-6737 at first; Tonks et al., J.Biol.Chem., 1988,263,6722-6730).
The clear and definite necessary regulating action of PTP1B in the Insulin receptor INSR Mediated Signal Transduction.In some cases, PTP1B is external and can both take place to interact and with its dephosphorylation, cause downward modulation (the Goldstein et al. of signal transduction pathway with activatory Insulin receptor INSR in intact cell, Mol.Cell.Biochem, 1998,182,91-99; Seely et al., Diabetes, 1996,45,1379-1385).In addition, PTP1B can regulate insulin the mitogenesis effect (Goldstein et al., Mol.Cell.Biochem, 1998,182,91-99).In the rat fat cell of overexpression PTP1B, the transposition of GLUT4 glucose transporter is suppressed, this hint PTP1B also be glucose transport negative growth factor (Chen etal., J.Biol.Chem., 1997,272,8026-8031).
The mice that lacks the PTP1B gene is rejected the negative adjusting that model shows that also PTP1B transduces to insulin signaling.The mice that has ruined PTP1B gene demonstrates insulin sensitivity increase and the increase of Insulin receptor INSR phosphorylation.PTP1B-/-mice when being given high fat diet, can resist weight increase and keep insulin sensitivity (Elchebly et al., Science, 1999,283,1544-1548).The obvious establishment of these researchs PTP1B is the treatment target in diabetes and the bariatrician.
Diabetes and obesity (being generically and collectively referred to as " sugared fat disease (diabesity) " now sometimes) are inter-related.Most of human obesity diseases are relevant with the leptin resistance with insulin resistance.In fact, obesity may than diabetes itself to the influence of insulin action bigger (Sindelka et al., Physiol Res., 2002,51,85-91).Syndrome X or metabolic syndrome are the new terminologies of such one group of disease, and this group disease can show the tendency that development diabetes and cardiovascular disease are arranged when occurring together.These symptoms comprise hypertension, high triglyceride, low HDL and obesity, tend to occur together in some individualities.Because the effect of PTP1B in diabetes and obesity, it has been considered to comprise the treatment target of the multiple metabolic disorder of diabetes, obesity and metabolic syndrome.By improving blood-glucose control, the inhibitor of PTP1B also can be used for slowing down, prevent, postponing or improve the sequela of diabetes, and these sequela comprise retinopathy, neuropathy, cardiovascular complication and nephropathy.
In the cell cycle process, be subjected to difference and regulate (Schievella et al., Cell.GrowthDiffer., 1993,4, PTP1B 239-246), in insulin sensitivity sex organization, be expressed as two kinds of different isotypes, these two kinds of isotypes are the generation of road montage (alternate splicing) in addition (Shifrin and Neel, J.Biol.Chem., 1993 by pre-mRNA, 268,25376-25384).In addition the ratio of the product of road montage is subjected to the influence of somatomedin such as insulin, variously be subjected to have nothing in common with each other in the inspection tissue (Sell and Reese, Mol.Genet.Metab., 1999,66,189-192).In these researchs, the level of each variant is relevant with the body fat percentage rate with plasma insulin concentration.Therefore these variants can be used as chronic hyperinsulinemia and type ii diabetes patient's biological marker.
Definition
" Protein Tyrosine Phosphatases 1B " is that its expression is treated by lacking gene outcome or the protein that antisense compounds is regulated.Protein Tyrosine Phosphatases 1B is commonly referred to PTP1B, but also can be described as Protein Tyrosine Phosphatases; PTPN1; RKPTP; Protein Tyrosine Phosphatases, non-receptor type 1.
" PTP1B nucleic acid " means the nucleic acid of any coding PTP1B.For example, in certain embodiments, PTP1B nucleic acid include but not limited to the to encode DNA sequence of PTP1B, the RNA sequence of transcribing from the DNA of coding PTP1B and the mRNA sequence of coding PTP1B.
" PTP1B mRNA " means the proteic mRNA of coding PTP1B.
The treatment indication
Antisense technology is to reduce the effective means that PTP1B expresses, and has been proved to be in multiple therapeutic, diagnosis type and the application of research property to have unique applications.Thus, in certain embodiments, the invention provides targeting coding PTP1B nucleic acid, can regulate the short antisense compounds of the expression of PTP1B.This paper provides in addition and can effectively suppress the short antisense compounds that PTP1B expresses.
In some treatment, the short antisense compounds of the nucleic acid by giving one or more targeting coding PTP1B is treated and is suspected to suffer from the disease that can treat by the expression of adjusting PTP1B or the experimenter of disease.For example, in non-limiting embodiments, described method comprises that the short antisense compounds with the treatment effective dose gives the step of animal.Short antisense compounds of the present invention can effectively suppress the active of PTP1B and/or suppress the expression of PTP1B.In one embodiment, the active or expression of the PTP1B among the experimenter is suppressed and reaches at least 10%, at least 20%, at least 25%, at least 30%, at least 40%, at least 50%, at least 60%, at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 98%, at least 99% or 100%.In certain embodiments, the active or expression of the PTP1B among the experimenter is suppressed and reaches about 30%.In certain embodiments, the active or expression of the PTP1B among the experimenter is suppressed and reaches at least 50% or more.
The reduction of the expression of PTP1B can for example be measured in blood, blood plasma, serum, fatty tissue, liver or any other body fluid, tissue or the organ of this animal.Preferably, the central contained cell of described analyzed fluid, tissue or organ contains nucleic acid and/or the PTP1B albumen itself of the PTP1B that encodes.
Some medicine that comprises The compounds of this invention and other compositionss also are provided.In certain embodiments, the short antisense compounds of targeting PTP1B nucleic acid is to be added to suitable medicine by certain chemical compound with effective dose can accept diluent or carrier, uses in pharmaceutical composition.
The short antisense compounds of targeting PTP1B nucleic acid can have short antisense compounds characteristic or feature any or that multiple this paper summarized.In certain embodiments, the short antisense compounds of targeting PTP1B nucleic acid has and is selected from following die body (pterion-deoxidation interval-pterion): 1-12-1,1-1-10-2,2-10-1-1,3-10-3,2-10-3,2-10-2,1-10-1,1-10-2,3-8-3,2-8-2,1-8-1,3-6-3 or 1-6-1, more preferably 1-10-1,2-10-2,3-10-3 and 1-9-2.
In certain embodiments, this paper provides by short antisense compounds that gives one or more targeting PTP1B nucleic acid or the pharmaceutical composition that comprises this chemical compound and treats individual method.Also provide by the short antisense compounds that gives targeting PTP1B nucleic acid and treat the method for suffering from the experimenter of active diseases associated of PTP1B or disease.Include but not limited to high blood-glucose or hyperglycemia, prediabetes, diabetes, type ii diabetes, metabolic syndrome, obesity and insulin resistance with PTP1B diseases associated and disease.Therefore, this paper provides by giving the short antisense compounds of targeting PTP1B nucleic acid, treats the method for high blood-glucose or hyperglycemia, prediabetes, diabetes, type ii diabetes, metabolic syndrome, obesity and insulin resistance.
In certain embodiments, the invention provides in order to give the experimenter, reduce the blood-glucose among this experimenter or prevent or postpone the compositions and the method for the outbreak of blood glucose levels rising among this experimenter by the short antisense inhibitor that PTP1B is expressed.
In certain embodiments, the invention provides, improve the insulin sensitivity among this experimenter or prevent or postpone the compositions and the method for the outbreak of insulin resistance among this experimenter in order to give the experimenter by the short antisense inhibitor that PTP1B is expressed.
In certain embodiments, the invention provides in order to give the experimenter, treat the metabolic disorder among this experimenter or prevent or postpone the compositions and the method for the outbreak of metabolic disorder among this experimenter by short antisense compounds with targeting PTP1B nucleic acid.This metabolic disorder can be that any and PTP1B express relevant metabolic disorder, includes but not limited to diabetes and obesity.The method that reduces obesity (adiposity) also is provided.The wherein method of the obesity (obesity) of metabolic rate raising for the treatment of also is provided.
In certain embodiments, the experimenter suffers from type ii diabetes.In certain embodiments, the experimenter demonstrates high HbA1c level.In certain embodiments, the HbA1c level be at least about 6%, at least about 7%, at least about 8%, at least about 9%, at least about 10% or at least about 11%.In preferred embodiments, HbA1cLevel reduces to about 7% or be lower than about 7%.In certain embodiments, the experimenter demonstrates high Body Mass Index.In certain embodiments, high Body Mass Index is greater than 25kg/m2In certain embodiments, the experimenter demonstrates hyperglycemia or hypertension glucose level.In a specific embodiment, blood glucose levels is a fasting blood pressure glucose level.In certain embodiments, high fasting blood pressure glucose level is 130mg/dL.In certain embodiments, the experimenter demonstrates hyperglycemia or demonstrates the fasting blood glucose levels before the treatment beginning and is higher than about 130mg/dL, baseline HbA1cLevel at least about 7% or Body Mass Index greater than 25kg/m2Or their any combination.
In certain embodiments, provide the method that reduces one or more this levels by the short antisense compounds that gives targeting PTP1B nucleic acid.For example, provide by short antisense compounds and given the experimenter, reduced fasting glucose level, HbA among the experimenter targeting PTP1B1cThe method of level or Body Mass Index level or their any combination.The fasting glucose can be fasting blood-glucose, fasting serum glucose or fasting plasma glucose.In some embodiments, fasting plasma glucose levels reduces at least about 25mg/dL or at least about 10mg/dL.In certain embodiments, described experimenter can not reach normal glucose level under the therapeutic scheme situation of accepting glucose attenuating medicament such as insulin, sulfonylureas or metformin.
In certain embodiments, the invention provides the method that changes lipid level.Some this method is to give the experimenter by the short antisense compounds with targeting PTP1B nucleic acid, reduces cholesterol, LDL and/or VLDL level among this experimenter or their any combination.In certain embodiments, the HDL level among the experimenter is to give this experimenter by the short antisense compounds with targeting PTP1B nucleic acid to improve.In certain embodiments, the LDL among the experimenter: HDL ratio and/or T-CHOL: HDL ratio are to give this experimenter by the short antisense compounds with targeting PTP1B nucleic acid to reduce.In certain embodiments, the HDL among the experimenter: LDL ratio and/or total HDL: the cholesterol ratio is to give this experimenter by the short antisense compounds with targeting PTP1B nucleic acid to improve.In certain embodiments, lipodogramme among the experimenter (lipid profile) is to give this experimenter by the short antisense compounds with targeting PTP1B nucleic acid, with raising HDL, reduction LDL, reduction VLDL, triglyceride reducing, reduction apolipoprotein B level or hypercholesterolemia reducing level or their combination, thereby be improved.In this embodiment, the experimenter is an animal, comprises the people.
Combination treatment
In certain embodiments, the pharmaceutical composition that one or more is comprised the short antisense compounds of targeting PTP1B nucleic acid gives altogether with one or more other medicament.In certain embodiments, described one or more other medicament be designed to its disease for the treatment of or disease identical with described one or more pharmaceutical compositions of the present invention.In certain embodiments, described one or more other medicament be designed to its disease for the treatment of or disease different with described one or more pharmaceutical compositions of the present invention.In certain embodiments, described one or more other medicament is designed to treat the ill effect of one or more pharmaceutical compositions of the present invention.In certain embodiments, one or more pharmaceutical compositions of the present invention are given altogether with another medicament, to treat the ill effect of this another medicament.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is given simultaneously.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is given at different time.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is prepared together in single dosage form.In certain embodiments, with other separately preparation of medicament of one or more pharmaceutical compositions of the present invention and one or more.
In certain embodiments, the medicament that can give altogether with the pharmaceutical composition of the short antisense compounds that comprises targeting PTP1B nucleic acid comprises that glucose reduces medicament and therapy.In some embodiments, glucose reduction medicament is PPAR agonist (gamma agonist, binary (dual) agonist or general (pan) agonist), dipeptidyl peptidase (IV) inhibitor, GLP-1 analog, insulin or insulin analog, insulin secretagogue, SGLT2 inhibitor, human branched chain starch analog, biguanide, alpha-glucosidase inhibitor, meglitinide, thiazolidinedione or sulfonylureas.
In some embodiments, glucose reduction medicament is the GLP-1 analog.In some embodiments, the GLP-1 analog is Exendin-4 or Li Lalu peptide (liraglutide).
In other embodiments, glucose reduction medicament is a sulfonylureas.In some embodiments, sulfonylureas is acetohexamide, chlorpropamide, tolbutamide, tolazamide, glimepiride, glipizide, glibenclamide or gliclazide.
In some embodiments, glucose reduction medicament is a biguanide.In some embodiments, biguanide is a metformin, and in some embodiments, reducing appears in the blood pressure glucose level, and lactic acidosis is as occurring increasing with the viewed lactic acidosis in metformin treatment back separately.
In some embodiments, glucose reduction medicament is a meglitinide.In some embodiments, meglitinide is Nateglinide or repaglinide.
In some embodiments, glucose reduction medicament is a thiazolidinedione.In some embodiments, thiazolidinedione is pioglitazone, rosiglitazone or troglitazone.In some embodiments, blood glucose levels occur to reduce, but weight increase do not resemble independent rosiglitazone treat viewed height.
In some embodiments, glucose reduction medicament is an alpha-glucosidase inhibitor.In some embodiments, alpha-glucosidase inhibitor is acarbose or miglitol.
In a certain embodiment, it is ISIS 113715 that the glucose that gives altogether reduces medicament.
In a certain embodiment, it is that curative life style changes that glucose reduces therapy.
In some this embodiment, glucose is reduced medicament give before the pharmaceutical composition of the present invention giving.In some this embodiment, glucose is reduced medicament after giving pharmaceutical composition of the present invention, give.In some this embodiment, glucose is reduced medicament when giving pharmaceutical composition of the present invention, give.In some this embodiment, the dosage that the glucose that gives altogether reduces medicament is identical with the dosage that gives separately to be given when glucose reduces medicament.In some this embodiment, the dosage that the glucose that gives altogether reduces medicament is lower than the dosage that is given when giving glucose reduction medicament separately.In some this embodiment, the dosage that the glucose that gives altogether reduces medicament is higher than the dosage that is given when giving glucose reduction medicament separately.
In certain embodiments, the medicament that can give altogether with the pharmaceutical composition of the short antisense compounds that comprises targeting PTP1B nucleic acid comprises that lipid reduces medicament.This lipid reduces medicament to be discussed in other places of the application, here is to be related to PTP1B and to be comprised.This lipid reduces medicament can reduce to glucose as above that medicament is described to be given.
In certain embodiments, the medicament that can give altogether with the pharmaceutical composition of the short antisense compounds that comprises targeting PTP1B nucleic acid comprises the anti-obesity medicament.This anti-obesity medicament can be as above reduces to glucose that medicament is described to be given.
Also provide the method that gives the short antisense compounds of targeting PTP1B nucleic acid by injection, this method also is included in the injection site and gives topical steroids.
Medicine
This paper also provides the short antisense compounds of targeting PTP1B nucleic acid to be used for preparation in order to reduce blood glucose levels (comprising the fasting glucose level) and HbA1cThe purposes of the medicine of level, Body Mass Index level or their any combination.This medicine can give in load phase (loading period) and the phase of keeping.In some embodiments, this medicine gives by subcutaneous or intravenous.In other embodiments, described medicine be every day at least once, each week at least once or every month at least once.In a specific embodiment, the short antisense compounds that exists in this medicine is that particularly 20 or 20 dosage with the short antisense compounds of the sequence of coker base give to be lower than longer sequence.The experimenter that this medicine can be shown high blood-glucose or hyperglycemia, prediabetes, diabetes, type ii diabetes, metabolic syndrome, obesity and insulin resistance.
Other aspects and the advantage of short antisense compounds have introduction in this article.Disclosed herein, particularly for all aspects and the advantage of other targets, be applicable to the compositions of the short antisense compounds that comprises targeting PTP1B nucleic acid and their using method.
The short antisense compounds of some targeting PTP1B nucleic acid
In certain embodiments, lacking the antisense compounds targeting has
Figure A20078002541601991
The sequence of searching number NM_002827.2 (being incorporated herein) with SEQ ID NO:11 or
Figure A20078002541601992
The PTP1B nucleic acid of the nucleotide 14178000-1425600 of the sequence of searching number NT_011362.9 (being incorporated herein) with SEQ ID NO:12.In some this embodiment, short antisense compounds and the SEQ ID NO:11 of targeting SEQ ID NO:11 have at least 90% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:11 of targeting SEQ ID NO:11 have at least 95% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:11 of targeting SEQ ID NO:11 have 100% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:12 of targeting SEQ ID NO:12 have at least 90% complementarity.In some this embodiment, the short antisense compounds of targeting SEQID NO:12 and SEQ ID NO:12 have at least 95% complementarity.In some this embodiment, short antisense compounds and the SEQ IDNO:12 of targeting SEQ ID NO:12 have 100% complementarity.
In certain embodiments, the short antisense compounds of targeting SEQ ID NO:11 comprises the nucleotide sequence that is selected from the nucleotide sequence that provides in table 16 and 17.In certain embodiments, the short antisense compounds of targeting SEQ ID NO:12 comprises the nucleotide sequence that is selected from the nucleotide sequence that provides in table 18 and 19.
Each nucleotide sequence that table 16,17,18 and 19 provides in each is independent of any modification to sugar moieties, Dan Julian key or nuclear base.Thus, the short antisense compounds that comprises certain nucleotide sequence that provides in the table 16,17,18 and 19 can comprise one or more to connecting the modification of key or nuclear base between sugar moieties, nucleoside independently.Isis number (Isis NO.) described antisense compounds represented the nuclear base sequence with one or more to connecting key between sugar moieties, nucleoside or examining the combination of the modification of base.
Table 16 and 17 has been enumerated the example of the short antisense compounds of targeting SEQ ID NO:11.Table 16 has been enumerated the short antisense compounds that 100% complementarity is arranged with SEQ ID NO:11.Table 17 has been enumerated the short antisense compounds that has one or two mispairing with respect to SEQ ID NO:11.Table 18 has been enumerated the short antisense compounds that 100% complementarity is arranged with SEQ ID NO:12.Table 19 has been enumerated the short antisense compounds that has 1 or 2 mispairing with respect to SEQ ID NO:12.The file that is marked with " gapmer die body " is represented the pterion of each short antisense compounds-at interval-pterion die body.Spacer segment comprises 2 '-deoxyribonucleotide, and each nucleotide of each pterion section comprises the sugar through 2 '-modification.The concrete sugar through 2 '-modification is also represented in " gapmer die body " file.For example, " 2-10-2MOE " means the 2-10-2gapmer die body, and wherein the spacer segment both sides of 10 2 '-deoxyribonucleotides are connected to the pterion section of 2 nucleotide, and wherein the nucleotide of pterion section is 2 '-MOE nucleotide.Connecting key between nucleoside is thiophosphate.Short antisense compounds comprises the 5-methylcytidine that substitutes not modified cytosine, unless show " not modified cytosine " in the gapmer die body file, represented in this case cytosine is not modified cytosine.For example, " 5-mC is only in the interval " expression spacer segment has the 5-methylcytidine, and the pterion section has not modified cytosine.
Table 16: the short antisense compounds of targeting SEQ ID NO:11
ISIS NO.5 ' target site3 ' target siteSequence (5 '-3 ')The Gapmer die body SEQ ID NO
147022 177 188 TTGTCGATCTCC 1-10-1MOE 886
147023 178 189 CTTGTCGATCTC 1-10-1MOE 859
147024 179 190 CCTTGTCGATCT 1-10-1MOE 853
147019 195 206 TCGATCTCCTCG 1-10-1MOE 877
147020 196 207 GTCGATCTCCTC 1-10-1MOE 868
147021 197 208 TGTCGATCTCCT 1-10-1MOE 882
147022 198 209 TTGTCGATCTCC 1-10-1MOE 886
147023 199 210 CTTGTCGATCTC 1-10-1MOE 859
147024 200 211 CCTTGTCGATCT 1-10-1MOE 853
147025 201 212 GCCTTGTCGATC 1-10-1MOE 865
147026 202 213 AGCCTTGTCGAT 1-10-1MOE 835
147027 203 214 CAGCCTTGTCGA 1-10-1MOE 843
147028 204 215 CCAGCCTTGTCG 1-10-1MOE 846
147073 204 215 CACTGATCCTGC 1-10-1MOE 842
147029 205 216 CCCAGCCTTGTC 1-10-1MOE 848
147030 206 217 TCCCAGCCTTGT 1-10-1MOE 874
147036 212 223 CCCAGTTCCCAG 1-10-1MOE 849
147037 213 224 GCCCAGTTCCCA 1-10-1MOE 863
147038 214 225 CGCCCAGTTCCC 1-10-1MOE 855
147039 215 226 CCGCCCAGTTCC 1-10-1MOE 850
147040 216 227 GCCGCCCAGTTC 1-10-1MOE 864
147041 217 228 AGCCGCCCAGTT 1-10-1MOE 834
147073 311 322 CACTGATCCTGC 1-10-1MOE 842
147042 323 334 GGTCAAAAGGGC 1-10-1MOE 866
147043 324 335 TGGTCAAAAGGG 1-10-1MOE 881
147044 325 336 GTGGTCAAAAGG 1-10-1MOE 869
147045 326 337 TGTGGTCAAAAG 1-10-1MOE 883
147046 327 338 CTGTGGTCAAAA 1-10-1MOE 858
147047 328 339 ACTGTGGTCAAA 1-10-1MOE 833
147051 332 343 TCCGACTGTGGT 1-10-1MOE 875
147052 333 344 ATCCGACTGTGG 1-10-1MOE 837
147053 334 345 AATCCGACTGTG 1-10-1MOE 829
147054 335 346 TAATCCGACTGT 1-10-1MOE 871
147055 336 347 TTAATCCGACTG 1-10-1MOE 884
147056 337 348 TTTAATCCGACT 1-10-1MOE 887
147057 338 349 ATTTAATCCGAC 1-10-1MOE 839
147058 339 350 AATTTAATCCGA 1-10-1MOE 830
147059 340 351 CAATTTAATCCG 1-10-1MOE 840
147060 341 352 GCAATTTAATCC 1-10-1MOE 861
147061 342 353 TGCAATTTAATC 1-10-1MOE 879
147045 679 690 TGTGGTCAAAAG 1-10-1MOE 883
147046 680 691 CTGTGGTCAAAA 1-10-1MOE 858
147045 787 798 TGTGGTCAAAAG 1-10-1MOE 883
147046 788 799 CTGTGGTCAAAA 1-10-1MOE 858
147066 816 827 CCTGCACTGACG 1-10-1MOE 851
404131 992 1005 ACCTTCGATCACAG 2-10-2MOE 831
147062 1024 1035 CACTGACGAGTC 1-10-1MOE 841
147063 1025 1036 GCACTGACGAGT 1-10-1MOE 862
147064 1026 1037 TGCACTGACGAG 1-10-1MOE 880
147065 1027 1038 CTGCACTGACGA 1-10-1MOE 857
147066 1028 1039 CCTGCACTGACG 1-10-1MOE 851
147067 1029 1040 TCCTGCACTGAC 1-10-1MOE 876
147068 1030 1041 ATCCTGCACTGA 1-10-1MOE 838
147069 1031 1042 GATCCTGCACTG 1-10-1MOE 860
147070 1032 1043 TGATCCTGCACT 1-10-1MOE 878
147071 1033 1044 CTGATCCTGCAC 1-10-1MOE 856
147072 1034 1045 ACTGATCCTGCA 1-10-1MOE 832
147073 1035 1046 CACTGATCCTGC 1-10-1MOE 842
147067 1199 1210 TCCTGCACTGAC 1-10-1MOE 876
147040 1288 1299 GCCGCCCAGTTC 1-10-1MOE 864
147040 1396 1407 GCCGCCCAGTTC 1-10-1MOE 864
147022 1868 1879 TTGTCGATCTCC 1-10-1MOE 886
147023 1869 1880 CTTGTCGATCTC 1-10-1MOE 859
147024 1870 1881 CCTTGTCGATCT 1-10-1MOE 853
147019 1886 1897 TCGATCTCCTCG 1-10-1MOE 877
147020 1887 1898 GTCGATCTCCTC 1-10-1MOE 868
147021 1888 1899 TGTCGATCTCCT 1-10-1MOE 882
147022 1889 1900 TTGTCGATCTCC 1-10-1MOE 886
147023 1890 1901 CTTGTCGATCTC 1-10-1MOE 859
147025 1892 1903 GCCTTGTCGATC 1-10-1MOE 865
147027 1894 1905 CAGCCTTGTCGA 1-10-1MOE 843
147028 1895 1906 CCAGCCTTGTCG 1-10-1MOE 846
147030 1897 1908 TCCCAGCCTTGT 1-10-1MOE 874
147037 1904 1915 GCCCAGTTCCCA 1-10-1MOE 863
147038 1905 1916 CGCCCAGTTCCC 1-10-1MOE 855
147040 1907 1918 GCCGCCCAGTTC 1-10-1MOE 864
147041 1908 1919 AGCCGCCCAGTT 1-10-1MOE 834
147022 1976 1987 TTGTCGATCTCC 1-10-1MOE 886
147023 1977 1988 CTTGTCGATCTC 1-10-1MOE 859
147024 1978 1989 CCTTGTCGATCT 1-10-1MOE 853
147020 1995 2006 GTCGATCTCCTC 1-10-1MOE 868
147021 1996 2007 TGTCGATCTCCT 1-10-1MOE 882
147022 1997 2008 TTGTCGATCTCC 1-10-1MOE 886
147023 1998 2009 CTTGTCGATCTC 1-10-1MOE 859
147024 1999 2010 CCTTGTCGATCT 1-10-1MOE 853
147025 2000 2011 GCCTTGTCGATC 1-10-1MOE 865
147026 2001 2012 AGCCTTGTCGAT 1-10-1MOE 835
147027 2002 2013 CAGCCTTGTCGA 1-10-1MOE 843
147028 2003 2014 CCAGCCTTGTCG 1-10-1MOE 846
147029 2004 2015 CCCAGCCTTGTC 1-10-1MOE 848
147030 2005 2016 TCCCAGCCTTGT 1-10-1MOE 874
147036 2011 2022 CCCAGTTCCCAG 1-10-1MOE 849
147037 2012 2023 GCCCAGTTCCCA 1-10-1MOE 863
147038 2013 2024 CGCCCAGTTCCC 1-10-1MOE 855
147039 2014 2025 CCGCCCAGTTCC 1-10-1MOE 850
147040 2015 2026 GCCGCCCAGTTC 1-10-1MOE 864
147041 2016 2027 AGCCGCCCAGTT 1-10-1MOE 834
404199 2366 2379 GGTCATGCACAGGC 2-10-2MOE 867
404134 2369 2382 TCAGGTCATGCACA 2-10-2MOE 873
404132 2548 2561 CCTTGGAATGTCTG 2-10-2MOE 852
147020 2613 2624 GTCGATCTCCTC 1-10-1MOE 868
147020 2721 2732 GTCGATCTCCTC 1-10-1MOE 868
404133 3289 3302 TATTCCATGGCCAT 2-10-2MOE 872
147032 6220 6231 GTTCCCAGCCTT 1-10-1MOE 870
147033 6221 6232 AGTTCCCAGCCT 1-10-1MOE 836
147034 6222 6233 CAGTTCCCAGCC 1-10-1MOE 844
147044 6288 6299 GTGGTCAAAAGG 1-10-1MOE 869
147045 6289 6300 TGTGGTCAAAAG 1-10-1MOE 883
147032 6329 6340 GTTCCCAGCCTT 1-10-1MOE 870
147033 6330 6341 AGTTCCCAGCCT 1-10-1MOE 836
147034 6331 6342 CAGTTCCCAGCC 1-10-1MOE 844
147044 6397 6408 GTGGTCAAAAGG 1-10-1MOE 869
147045 6398 6409 TGTGGTCAAAAG 1-10-1MOE 883
147058 7057 7068 AATTTAATCCGA 1-10-1MOE 830
147059 7058 7069 CAATTTAATCCG 1-10-1MOE 840
147060 7059 7070 GCAATTTAATCC 1-10-1MOE 861
147058 7166 7177 AATTTAATCCGA 1-10-1MOE 830
147059 7167 7178 CAATTTAATCCG 1-10-1MOE 840
147041 8084 8095 AGCCGCCCAGTT 1-10-1MOE 834
147041 8192 8203 AGCCGCCCAGTT 1-10-1MOE 834
147027 8630 8641 CAGCCTTGTCGA 1-10-1MOE 843
147028 8631 8642 CCAGCCTTGTCG 1-10-1MOE 846
147027 8738 8749 CAGCCTTGTCGA 1-10-1MOE 843
147028 8739 8750 CCAGCCTTGTCG 1-10-1MOE 846
147043 10957 10968 TGGTCAAAAGGG 1-10-1MOE 881
147044 10958 10969 GTGGTCAAAAGG 1-10-1MOE 869
147043 11065 11076 TGGTCAAAAGGG 1-10-1MOE 881
147044 11066 11077 GTGGTCAAAAGG 1-10-1MOE 869
147071 11605 11616 CTGA TCCTGCAC 1-10-1MOE 856
147070 11611 11622 TGATCCTGCACT 1-10-1MOE 878
147071 11612 11623 CTGATCCTGCAC 1-10-1MOE 856
147072 12294 12305 ACTGATCCTGCA 1-10-1MOE 832
147072 12299 12310 ACTGATCCTGCA 1-10-1MOE 832
147030 12805 12816 TCCCAGCCTTGT 1-10-1MOE 874
147031 12806 12817 TTCCCAGCCTTG 1-10-1MOE 885
147053 12939 12950 AATCCGACTGTG 1-10-1MOE 829
147030 12986 12997 TCCCAGCCTTGT 1-10-1MOE 874
147031 12987 12998 TTCCCAGCCTTG 1-10-1MOE 885
147053 13120 13131 AATCCGACTGTG 1-10-1MOE 829
147051 13162 13173 TCCGACTGTGGT 1-10-1MOE 875
147061 13316 13327 TGCAATTTAATC 1-10-1MOE 879
147047 13339 13350 ACTGTGGTCAAA 1-10-1MOE 833
147029 14058 14069 CCCAGCCTTGTC 1-10-1MOE 848
147029 14239 14250 CCCAGCCTTGTC 1-10-1MOE 848
147067 15560 15571 TCCTGCACTGAC 1-10-1MOE 876
147068 15561 15572 ATCCTGCACTGA 1-10-1MOE 838
147067 15742 15753 TCCTGCACTGAC 1-10-1MOE 876
147069 15744 15755 GATCCTGCACTG 1-10-1MOE 860
147042 16561 16572 GGTCAAAAGGGC 1-10-1MOE 866
147042 16727 16738 GGTCAAAAGGGC 1-10-1MOE 866
147030 17619 17630 TCCCAGCCTTGT 1-10-1MOE 874
147064 17762 17773 TGCACTGACGAG 1-10-1MOE 880
147030 17787 17798 TCCCAGCCTTGT 1-10-1MOE 874
147064 17930 17941 TGCACTGACGAG 1-10-1MOE 880
147042 19201 19212 GGTCAAAAGGGC 1-10-1MOE 866
147042 19369 19380 GGTCAAAAGGGC 1-10-1MOE 866
147027 21190 21201 CAGCCTTGTCGA 1-10-1MOE 843
147028 21191 21202 CCAGCCTTGTCG 1-10-1MOE 846
147027 21358 21369 CAGCCTTGTCGA 1-10-1MOE 843
147028 21359 21370 CCAGCCTTGTCG 1-10-1MOE 846
147070 22021 22032 TGATCCTGCACT 1-10-1MOE 878
147070 22189 22200 TGATCCTGCACT 1-10-1MOE 878
147047 22606 22617 ACTGTGGTCAAA 1-10-1MOE 833
147043 24318 24329 TGGTCAAAAGGG 1-10-1MOE 881
147044 24319 24330 GTGGTCAAAAGG 1-10-1MOE 869
147045 24320 24331 TGTGGTCAAAAG 1-10-1MOE 883
147046 24321 24332 CTGTGGTCAAAA 1-10-1MOE 858
147043 24486 24497 TGGTCAAAAGGG 1-10-1MOE 881
147044 24487 24498 GTGGTCAAAAGG 1-10-1MOE 869
147046 24489 24500 CTGTGGTCAAAA 1-10-1MOE 858
147047 24490 24501 ACTGTGGTCAAA 1-10-1MOE 833
147040 25065 25076 GCCGCCCAGTTC 1-10-1MOE 864
147041 25066 25077 AGCCGCCCAGTT 1-10-1MOE 834
147046 25160 25171 CTGTGGTCAAAA 1-10-1MOE 858
147039 25232 25243 CCGCCCAGTTCC 1-10-1MOE 850
147040 25233 25244 GCCGCCCAGTTC 1-10-1MOE 864
147041 25234 25245 AGCCGCCCAGTT 1-10-1MOE 834
147046 25328 25339 CTGTGGTCAAAA 1-10-1MOE 858
147057 25508 25519 ATTTAATCCGAC 1-10-1MOE 839
147061 25512 25523 TGCAATTTAATC 1-10-1MOE 879
147057 25676 25687 ATTTAATCCGAC 1-10-1MOE 839
147069 28878 28889 GATCCTGCACTG 1-10-1MOE 860
147070 28879 28890 TGATCCTGCACT 1-10-1MOE 878
147053 30133 30144 AATCCGACTGTG 1-10-1MOE 829
147053 30278 30289 AATCCGACTGTG 1-10-1MOE 829
147054 30864 30875 TAATCCGACTGT 1-10-1MOE 871
147043 30985 30996 TGGTCAAAAGGG 1-10-1MOE 881
147054 31011 31022 TAATCCGACTGT 1-10-1MOE 871
147043 31133 31144 TGGTCAAAAGGG 1-10-1MOE 881
147036 32233 32244 CCCAGTTCCCAG 1-10-1MOE 849
147072 32372 32383 ACTGATCCTGCA 1-10-1MOE 832
147072 32520 32531 ACTGATCCTGCA 1-10-1MOE 832
147069 33056 33067 GATCCTGCACTG 1-10-1MOE 860
147070 33057 33068 TGATCCTGCACT 1-10-1MOE 878
147071 33058 33069 CTGATCCTGCAC 1-10-1MOE 856
147051 33126 33137 TCCGACTGTGGT 1-10-1MOE 875
147070 33205 33216 TGATCCTGCACT 1-10-1MOE 878
147071 33206 33217 CTGATCCTGCAC 1-10-1MOE 856
147051 33274 33285 TCCGACTGTGGT 1-10-1MOE 875
147046 33318 33329 CTGTGGTCAAAA 1-10-1MOE 858
147049 33321 33332 CGACTGTGGTCA 1-10-1MOE 854
147051 33323 33334 TCCGACTGTGGT 1-10-1MOE 875
147046 33466 33477 CTGTGGTCAAAA 1-10-1MOE 858
147047 33467 33478 ACTGTGGTCAAA 1-10-1MOE 833
147051 33471 33482 TCCGACTGTGGT 1-10-1MOE 875
147046 33640 33651 CTGTGGTCAAAA 1-10-1MOE 858
147051 33645 33656 TCCGACTGTGGT 1-10-1MOE 875
147046 33788 33799 CTGTGGTCAAAA 1-10-1MOE 858
147051 33793 33804 TCCGACTGTGGT 1-10-1MOE 875
147059 35437 35448 CAATTTAATCCG 1-10-1MOE 840
147060 35438 35449 GCAATTTAATCC 1-10-1MOE 861
147060 35586 35597 GCAATTTAATCC 1-10-1MOE 861
147021 36093 36104 TGTCGATCTCCT 1-10-1MOE 882
147061 36250 36261 TGCAATTTAATC 1-10-1MOE 879
147061 36398 36409 TGCAATTTAATC 1-10-1MOE 879
147073 37485 37496 CACTGATCCTGC 1-10-1MOE 842
147073 37633 37644 CACTGATCCTGC 1-10-1MOE 842
147043 40214 40225 TGGTCAAAAGGG 1-10-1MOE 881
147061 40353 40364 TGCAATTTAATC 1-10-1MOE 879
147043 40362 40373 TGGTCAAAAGGG 1-10-1MOE 881
147061 40501 40512 TGCAATTTAATC 1-10-1MOE 879
147031 42527 42538 TTCCCAGCCTTG 1-10-1MOE 885
147032 42528 42539 GTTCCCAGCCTT 1-10-1MOE 870
147034 42530 42541 CAGTTCCCAGCC 1-10-1MOE 844
147031 42675 42686 TTCCCAGCCTTG 1-10-1MOE 885
147032 42676 42687 GTTCCCA GCCTT 1-10-1MOE 870
147033 42677 42688 AGTTCCCAGCCT 1-10-1MOE 836
147034 42678 42689 CAGTTCCCAGCC 1-10-1MOE 844
147074 43848 43859 CCACTGATCCTG 1-10-1MOE 845
147074 43996 44007 CCACTGATCCTG 1-10-1MOE 845
147051 45402 45413 TCCGACTGTGGT 1-10-1MOE 875
147051 45550 45561 TCCGACTGTGGT 1-10-1MOE 875
147074 46125 46136 CCACTGATCCTG 1-10-1MOE 845
147057 46313 46324 ATTTAATCCGAC 1-10-1MOE 839
147058 46314 46325 AATTTAATCCGA 1-10-1MOE 830
147059 46315 46326 CAATTTAATCCG 1-10-1MOE 840
147061 46317 46328 TGCAATTTAATC 1-10-1MOE 879
147057 46461 46472 ATTTAATCCGAC 1-10-1MOE 839
147059 46463 46474 CAATTTAATCCG 1-10-1MOE 840
147061 46465 46476 TGCAATTTAATC 1-10-1MOE 879
147058 47413 47424 AATTTAATCCGA 1-10-1MOE 830
147073 48221 48232 CACTGATCCTGC 1-10-1MOE 842
147073 48369 48380 CACTGATCCTGC 1-10-1MOE 842
147074 48370 48381 CCACTGA TCCTG 1-10-1MOE 845
147027 48566 48577 CAGCCTTGTCGA 1-10-1MOE 843
147027 48714 48725 CAGCCTTGTCGA 1-10-1MOE 843
147028 48715 48726 CCAGCCTTGTCG 1-10-1MOE 846
147067 49050 49061 TCCTGCACTGAC 1-10-1MOE 876
147068 49051 49062 ATCCTGCACTGA 1-10-1MOE 838
147067 49198 49209 TCCTGCACTGAC 1-10-1MOE 876
147073 49524 49535 CACTGATCCTGC 1-10-1MOE 842
147073 49672 49683 CACTGATCCTGC 1-10-1MOE 842
147074 49673 49684 CCACTGATCCTG 1-10-1MOE 845
147036 50421 50432 CCCAGTTCCCAG 1-10-1MOE 849
147036 52292 52303 CCCAGTTCCCAG 1-10-1MOE 849
147037 52293 52304 GCCCAGTTCCCA 1-10-1MOE 863
147036 52438 52449 CCCAGTTCCCAG 1-10-1MOE 849
147037 52439 52450 GCCCAGTTCCCA 1-10-1MOE 863
147034 53148 53159 CAGTTCCCAGCC 1-10-1MOE 844
147034 53294 53305 CAGTTCCCAGCC 1-10-1MOE 844
147042 53445 53456 GGTCAAAAGGGC 1-10-1MOE 866
147043 53446 53457 TGGTCAAAAGGG 1-10-1MOE 881
147044 53447 53458 GTGGTCAAAAGG 1-10-1MOE 869
147042 53591 53602 GGTCAAAAGGGC 1-10-1MOE 866
147030 53592 53603 TCCCAGCCTTGT 1-10-1MOE 874
147043 53592 53603 TGGTCAAAAGGG 1-10-1MOE 881
147031 53593 53604 TTCCCAGCCTTG 1-10-1MOE 885
147044 53593 53604 GTGGTCAAAAGG 1-10-1MOE 869
147030 53738 53749 TCCCAGCCTTGT 1-10-1MOE 874
147031 53739 53750 TTCCCAGCCTTG 1-10-1MOE 885
147040 53783 53794 GCCGCCCAGTTC 1-10-1MOE 864
147041 53784 53795 AGCCGCCCAGTT 1-10-1MOE 834
147041 53930 53941 AGCCGCCCAGTT 1-10-1MOE 834
147042 55008 55019 GGTCAAAAGGGC 1-10-1MOE 866
147043 55009 55020 TGGTCAAAAGGG 1-10-1MOE 881
147042 55154 55165 GGTCAAAAGGGC 1-10-1MOE 866
147043 55155 55166 TGGTCAAAAGGG 1-10-1MOE 881
147058 55281 55292 AATTTAATCCGA 1-10-1MOE 830
147058 55427 55438 AATTTAATCCGA 1-10-1MOE 830
147019 55682 55693 TCGATCTCCTCG 1-10-1MOE 877
147021 55684 55695 TGTCGATCTCCT 1-10-1MOE 882
147021 55830 55841 TGTCGATCTCCT 1-10-1MOE 882
147054 56275 56286 TAATCCGACTGT 1-10-1MOE 871
147055 56276 56287 TTAATCCGACTG 1-10-1MOE 884
147056 56277 56288 TTTAATCCGACT 1-10-1MOE 887
147058 56279 56290 AATTTAATCCGA 1-10-1MOE 830
147059 56280 56291 CAATTTAATCCG 1-10-1MOE 840
147060 56281 56292 GCAATTTAATCC 1-10-1MOE 861
147061 56282 56293 TGCAATTTAATC 1-10-1MOE 879
147051 56418 56429 TCCGACTGTGGT 1-10-1MOE 875
147053 56420 56431 AATCCGACTGTG 1-10-1MOE 829
147054 56421 56432 TAATCCGACTGT 1-10-1MOE 871
147055 56422 56433 TTAATCCGACTG 1-10-1MOE 884
147056 56423 56434 TTTAATCCGACT 1-10-1MOE 887
147057 56424 56435 ATTTAATCCGAC 1-10-1MOE 839
147058 56425 56436 AATTTAATCCGA 1-10-1MOE 830
147061 56428 56439 TGCAATTTAATC 1-10-1MOE 879
147045 57118 57129 TGTGGTCAAAAG 1-10-1MOE 883
147045 57264 57275 TGTGGTCAAAAG 1-10-1MOE 883
147046 57265 57276 CTGTGGTCAAAA 1-10-1MOE 858
147071 58028 58039 CTGATCCTGCAC 1-10-1MOE 856
147071 58174 58185 CTGATCCTGCAC 1-10-1MOE 856
147043 61111 61122 TGGTCAAAAGGG 1-10-1MOE 881
147071 61130 61141 CTGATCCTGCAC 1-10-1MOE 856
147020 61226 61237 GTCGATCTCCTC 1-10-1MOE 868
147043 61257 61268 TGGTCAAAAGGG 1-10-1MOE 881
147071 61276 61287 CTGATCCTGCAC 1-10-1MOE 856
147035 61277 61288 CCAGTTCCCAGC 1-10-1MOE 847
147036 61278 61289 CCCAGTTCCCAG 1-10-1MOE 849
147037 61279 61290 GCCCAGTTCCCA 1-10-1MOE 863
147038 61280 61291 CGCCCAGTTCCC 1-10-1MOE 855
147039 61281 61292 CCGCCCAGTTCC 1-10-1MOE 850
147040 61282 61293 GCCGCCCAGTTC 1-10-1MOE 864
147071 61309 61320 CTGATCCTGCAC 1-10-1MOE 856
147020 61372 61383 GTCGATCTCCTC 1-10-1MOE 868
147034 61422 61433 CAGTTCCCAGCC 1-10-1MOE 844
147035 61423 61434 CCAGTTCCCAGC 1-10-1MOE 847
147036 61424 61435 CCCAGTTCCCAG 1-10-1MOE 849
147037 61425 61436 GCCCAGTTCCCA 1-10-1MOE 863
147038 61426 61437 CGCCCAGTTCCC 1-10-1MOE 855
147040 61428 61439 GCCGCCCAGTTC 1-10-1MOE 864
147071 61455 61466 CTGATCCTGCAC 1-10-1MOE 856
147073 62003 62014 CACTGATCCTGC 1-10-1MOE 842
147073 62149 62160 CACTGATCCTGC 1-10-1MOE 842
147066 63065 63076 CCTGCACTGACG 1-10-1MOE 851
147068 63067 63078 ATCCTGCACTGA 1-10-1MOE 838
147069 63146 63157 GATCCTGCACTG 1-10-1MOE 860
147062 63207 63218 CACTGACGAGTC 1-10-1MOE 841
147066 63211 63222 CCTGCACTGACG 1-10-1MOE 851
147057 64054 64065 ATTTAATCCGAC 1-10-1MOE 839
147036 64538 64549 CCCAGTTCCCAG 1-10-1MOE 849
147037 64539 64550 GCCCAGTTCCCA 1-10-1MOE 863
147037 64685 64696 GCCCAGTTCCCA 1-10-1MOE 863
147066 64864 64875 CCTGCACTGACG 1-10-1MOE 851
147067 64865 64876 TCCTGCACTGAC 1-10-1MOE 876
147066 65010 65021 CCTGCACTGACG 1-10-1MOE 851
147067 65011 65022 TCCTGCACTGAC 1-10-1MOE 876
147045 65017 65028 TGTGGTCAAAAG 1-10-1MOE 883
147045 65163 65174 TGTGGTCAAAAG 1-10-1MOE 883
147046 65164 65175 CTGTGGTCAAAA 1-10-1MOE 858
147068 65408 65419 ATCCTGCACTGA 1-10-1MOE 838
147071 65411 65422 CTGATCCTGCAC 1-10-1MOE 856
147069 65549 65560 GATCCTGCACTG 1-10-1MOE 860
147068 65554 65565 ATCCTGCACTGA 1-10-1MOE 838
147071 65557 65568 CTGATCCTGCAC 1-10-1MOE 856
147029 67741 67752 CCCAGCCTTGTC 1-10-1MOE 848
147030 67742 67753 TCCCAGCCTTGT 1-10-1MOE 874
147031 67743 67754 TTCCCAGCCTTG 1-10-1MOE 885
147028 67886 67897 CCAGCCTTGTCG 1-10-1MOE 846
147029 67887 67898 CCCAGCCTTGTC 1-10-1MOE 848
147030 67888 67899 TCCCAGCCTTGT 1-10-1MOE 874
147031 67889 67900 TTCCCAGCCTTG 1-10-1MOE 885
147043 68867 68878 TGGTCAAAAGGG 1-10-1MOE 881
147044 68868 68879 GTGGTCAAAAGG 1-10-1MOE 869
147045 68869 68880 TGTGGTCAAAAG 1-10-1MOE 883
147043 69013 69024 TGGTCAAAAGGG 1-10-1MOE 881
147044 69014 69025 GTGGTCAAAAGG 1-10-1MOE 869
147045 69015 69026 TGTGGTCAAAAG 1-10-1MOE 883
147046 69016 69027 CTGTGGTCAAAA 1-10-1MOE 858
147071 69519 69530 CTGATCCTGCAC 1-10-1MOE 856
147072 69520 69531 ACTGATCCTGCA 1-10-1MOE 832
147073 69521 69532 CACTGATCCTGC 1-10-1MOE 842
147071 69665 69676 CTGATCCTGCAC 1-10-1MOE 856
147072 69666 69677 ACTGATCCTGCA 1-10-1MOE 832
147073 69667 69678 CACTGATCCTGC 1-10-1MOE 842
147074 69668 69679 CCACTGATCCTG 1-10-1MOE 845
147066 69869 69880 CCTGCACTGACG 1-10-1MOE 851
147066 70015 70026 CCTGCACTGACG 1-10-1MOE 851
147023 70465 70476 CTTGTCGATCTC 1-10-1MOE 859
147023 70611 70622 CTTGTCGATCTC 1-10-1MOE 859
147062 70615 70626 CACTGACGAGTC 1-10-1MOE 841
147063 70616 70627 GCACTGACGAGT 1-10-1MOE 862
147064 70617 70628 TGCACTGACGAG 1-10-1MOE 880
147065 70618 70629 CTGCACTGACGA 1-10-1MOE 857
147066 70619 70630 CCTGCACTGACG 1-10-1MOE 851
147063 70762 70773 GCACTGACGAGT 1-10-1MOE 862
147064 70763 70774 TGCACTGACGAG 1-10-1MOE 880
147065 70764 70775 CTGCACTGACGA 1-10-1MOE 857
147066 70765 70776 CCTGCACTGACG 1-10-1MOE 851
147072 70998 71009 ACTGATCCTGCA 1-10-1MOE 832
147073 70999 71010 CACTGATCCTGC 1-10-1MOE 842
147072 71144 71155 ACTGATCCTGCA 1-10-1MOE 832
147073 71145 71156 CACTGATCCTGC 1-10-1MOE 842
147074 71146 71157 CCACTGATCCTG 1-10-1MOE 845
147037 71351 71362 GCCCAGTTCCCA 1-10-1MOE 863
147038 71352 71363 CGCCCAGTTCCC 1-10-1MOE 855
147039 71353 71364 CCGCCCAGTTCC 1-10-1MOE 850
147037 71497 71508 GCCCAGTTCCCA 1-10-1MOE 863
147038 71498 71509 CGCCCAGTTCCC 1-10-1MOE 855
147039 71499 71510 CCGCCCAGTTCC 1-10-1MOE 850
147061 71641 71652 TGCAATTTAATC 1-10-1MOE 879
147061 71787 71798 TGCAATTTAATC 1-10-1MOE 879
Table 17: targeting SEQ ID NO:11 and have the short antisense compounds of 1 or 2 mispairing
ISIS NO.5 ' target site3 ' target siteSequence (5 '-3 ')The Gapmer die body SEQ ID NO
147022 177 188 TTGTCGATCTCC 1-10-1MOE 886
147023 178 189 CTTGTCGATCTC 1-10-1MOE 859
147020 196 207 GTCGATCTCCTC 1-10-1MOE 868
147022 198 209 TTGTCGATCTCC 1-10-1MOE 886
147024 200 211 CCTTGTCGATCT 1-10-1MOE 853
147026 202 213 AGCCTTGTCGAT 1-10-1MOE 835
147028 204 215 CCAGCCTTGTCG 1-10-1MOE 846
147029 205 216 CCCAGCCTTGTC 1-10-1MOE 848
147030 206 217 TCCCAGCCTTGT 1-10-1MOE 874
147036 212 223 CCCAGTTCCCAG 1-10-1MOE 849
147073 311 322 CACTGATCCTGC 1-10-1MOE 842
147046 327 338 CTGTGGTCAAAA 1-10-1MOE 858
147047 328 339 ACTGTGGTCAAA 1-10-1MOE 833
147048 329 340 GACTGTGGTCAA 1-10-1MOE 888
147049 330 341 CGACTGTGGTCA 1-10-1MOE 854
147050 331 342 CCGACTGTGGTC 1-10-1MOE 889
147051 332 343 TCCGACTGTGGT 1-10-1MOE 875
147052 333 344 ATCCGACTGTGG 1-10-1MOE 837
147053 334 345 AATCCGACTGTG 1-10-1MOE 829
147054 335 346 TAATCCGACTGT 1-10-1MOE 871
147055 336 347 TTAATCCGACTG 1-10-1MOE 884
147056 337 348 TTTAATCCGACT 1-10-1MOE 887
147057 338 349 ATTTAATCCGAC 1-10-1MOE 839
147058 339 350 AATTTAATCCGA 1-10-1MOE 830
147060 341 352 GCAATTTAATCC 1-10-1MOE 861
147061 342 353 TGCAATTTAATC 1-10-1MOE 879
147062 1024 1035 CACTGACGAGTC 1-10-1MOE 841
147063 1025 1036 GCACTGACGAGT 1-10-1MOE 862
147068 1030 1041 ATCCTGCACTGA 1-10-1MOE 838
147071 1033 1044 CTGATCCTGCAC 1-10-1MOE 856
147073 1035 1046 CACTGATCCTGC 1-10-1MOE 842
147074 1036 1047 CCACTGATCCTG 1-10-1MOE 845
147067 1091 1102 TCCTGCACTGAC 1-10-1MOE 876
147024 1891 1902 CCTTGTCGATCT 1-10-1MOE 853
147026 1893 1904 AGCCTTGTCGAT 1-10-1MOE 835
147029 1896 1907 CCCAGCCTTGTC 1-10-1MOE 848
147036 1903 1914 CCCAGTTCCCAG 1-10-1MOE 849
147039 1906 1917 CCGCCCAGTTCC 1-10-1MOE 850
147019 1994 2005 TCGATCTCCTCG 1-10-1MOE 877
401385 2815 2828 CCCAGTGGGTTTGA 2-10-2MOE 890
147033 5265 5276 AGTTCCCAGCCT 1-10-1MOE 836
147033 5373 5384 AGTTCCCAGCCT 1-10-1MOE 836
147060 7168 7179 GCAATTTAATCC 1-10-1MOE 861
147053 10527 10538 AATCCGACTGTG 1-10-1MOE 829
147053 10635 10646 AATCCGACTGTG 1-10-1MOE 829
147070 11604 11615 TGATCCTGCACT 1-10-1MOE 878
147071 11612 11623 CTGATCCTGCAC 1-10-1MOE 856
147072 12294 12305 ACTGATCCTGCA 1-10-1MOE 832
147072 12299 12310 ACTGATCCTGCA 1-10-1MOE 832
147052 12938 12949 ATCCGACTGTGG 1-10-1MOE 837
147052 13119 13130 ATCCGACTGTGG 1-10-1MOE 837
147047 13158 13169 ACTGTGGTCAAA 1-10-1MOE 833
147048 13159 13170 GACTGTGGTCAA 1-10-1MOE 888
147049 13160 13171 CGACTGTGGTCA 1-10-1MOE 854
147048 13340 13351 GACTGTGGTCAA 1-10-1MOE 888
147049 13341 13352 CGACTGTGGTCA 1-10-1MOE 854
147051 13343 13354 TCCGACTGTGGT 1-10-1MOE 875
147061 13497 13508 TGCAATTTAATC 1-10-1MOE 879
147069 15562 15573 GATCCTGCACTG 1-10-1MOE 860
147068 15743 15754 ATCCTGCACTGA 1-10-1MOE 838
147049 17181 17192 CGACTGTGGTCA 1-10-1MOE 854
147049 17349 17360 CGACTGTGGTCA 1-10-1MOE 854
147047 22438 22449 ACTGTGGTCAAA 1-10-1MOE 833
147047 24322 24333 ACTGTGGTCAAA 1-10-1MOE 833
147045 24488 24499 TGTGGTCAAAAG 1-10-1MOE 883
147039 25064 25075 CCGCCCAGTTCC 1-10-1MOE 850
147057 25508 25519 ATTTAATCCGAC 1-10-1MOE 839
147057 25676 25687 ATTTAATCCGAC 1-10-1MOE 839
147061 25680 25691 TGCAATTTAATC 1-10-1MOE 879
147069 28731 28742 GATCCTGCACTG 1-10-1MOE 860
147052 30132 30143 ATCCGACTGTGG 1-10-1MOE 837
147052 30277 30288 ATCCGACTGTGG 1-10-1MOE 837
147036 32085 32096 CCCAGTTCCCAG 1-10-1MOE 849
147072 32520 32531 ACTGATCCTGCA 1-10-1MOE 832
147071 33058 33069 CTGATCCTGCAC 1-10-1MOE 856
147050 33125 33136 CCGACTGTGGTC 1-10-1MOE 889
147069 33204 33215 GATCCTGCACTG 1-10-1MOE 860
147050 33273 33284 CCGACTGTGGTC 1-10-1MOE 889
147047 33319 33330 ACTGTGGTCAAA 1-10-1MOE 833
147050 33322 33333 CCGACTGTGGTC 1-10-1MOE 889
147052 33324 33335 ATCCGACTGTGG 1-10-1MOE 837
147049 33469 33480 CGACTGTGGTCA 1-10-1MOE 854
147050 33470 33481 CCGACTGTGGTC 1-10-1MOE 889
147052 33472 33483 ATCCGACTGTGG 1-10-1MOE 837
147047 33641 33652 ACTGTGGTCAAA 1-10-1MOE 833
147047 33789 33800 ACTGTGGTCAAA 1-10-1MOE 833
147059 35585 35596 CAATTTAATCCG 1-10-1MOE 840
147021 36241 36252 TGTCGATCTCCT 1-10-1MOE 882
147073 37633 37644 CACTGATCCTGC 1-10-1MOE 842
147033 42529 42540 AGTTCCCAGCCT 1-10-1MOE 836
147050 45401 45412 CCGACTGTGGTC 1-10-1MOE 889
147050 45549 45560 CCGACTGTGGTC 1-10-1MOE 889
147074 46125 46136 CCACTGATCCTG 1-10-1MOE 845
147057 46313 46324 ATTTAATCCGAC 1-10-1MOE 839
147058 46462 46473 AATTTAATCCGA 1-10-1MOE 830
147058 47413 47424 AATTTAATCCGA 1-10-1MOE 830
147058 47561 47572 AATTTAATCCGA 1-10-1MOE 830
147073 48221 48232 CACTGATCCTGC 1-10-1MOE 842
147073 48369 48380 CACTGATCCTGC 1-10-1MOE 842
147028 48567 48578 CCAGCCTTGTCG 1-10-1MOE 846
147068 49199 49210 ATCCTGCACTGA 1-10-1MOE 838
147036 50273 50284 CCCAGTTCCCAG 1-10-1MOE 849
147040 53929 53940 GCCGCCCAGTTC 1-10-1MOE 864
147047 54769 54780 ACTGTGGTCAAA 1-10-1MOE 833
147048 54770 54781 GACTGTGGTCAA 1-10-1MOE 888
147047 54915 54926 ACTGTGGTCAAA 1-10-1MOE 833
147048 54916 54927 GACTGTGGTCAA 1-10-1MOE 888
147019 55828 55839 TCGATCTCCTCG 1-10-1MOE 877
147047 56268 56279 ACTGTGGTCAAA 1-10-1MOE 833
147048 56269 56280 GACTGTGGTCAA 1-10-1MOE 888
147049 56270 56281 CGACTGTGGTCA 1-10-1MOE 854
147050 56271 56282 CCGACTGTGGTC 1-10-1MOE 889
147051 56272 56283 TCCGACTGTGGT 1-10-1MOE 875
147052 56273 56284 ATCCGACTGTGG 1-10-1MOE 837
147053 56274 56285 AATCCGACTGTG 1-10-1MOE 829
147056 56277 56288 TTTAATCCGACT 1-10-1MOE 887
147057 56278 56289 ATTTAATCCGAC 1-10-1MOE 839
147047 56414 56425 ACTGTGGTCAAA 1-10-1MOE 833
147048 56415 56426 GACTGTGGTCAA 1-10-1MOE 888
147049 56416 56427 CGACTGTGGTCA 1-10-1MOE 854
147050 56417 56428 CCGACTGTGGTC 1-10-1MOE 889
147052 56419 56430 ATCCGACTGTGG 1-10-1MOE 837
147057 56424 56435 ATTTAATCCGAC 1-10-1MOE 839
147058 56425 56436 AATTTAATCCGA 1-10-1MOE 830
147059 56426 56437 CAATTTAATCCG 1-10-1MOE 840
147060 56427 56438 GCAATTTAATCC 1-10-1MOE 861
147046 57119 57130 CTGTGGTCAAAA 1-10-1MOE 858
147071 58174 58185 CTGATCCTGCAC 1-10-1MOE 856
147071 61130 61141 CTGATCCTGCAC 1-10-1MOE 856
147034 61276 61287 CAGTTCCCAGCC 1-10-1MOE 844
147071 61309 61320 CTGATCCTGCAC 1-10-1MOE 856
147039 61427 61438 CCGCCCAGTTCC 1-10-1MOE 850
147071 61455 61466 CTGATCCTGCAC 1-10-1MOE 856
147073 62003 62014 CACTGATCCTGC 1-10-1MOE 842
147062 63061 63072 CACTGACGAGTC 1-10-1MOE 841
147068 63213 63224 ATCCTGCACTGA 1-10-1MOE 838
147069 63292 63303 GATCCTGCACTG 1-10-1MOE 860
147057 64054 64065 ATTTAATCCGAC 1-10-1MOE 839
147057 64200 64211 ATTTAATCCGAC 1-10-1MOE 839
147070 64427 64438 TGATCCTGCACT 1-10-1MOE 878
147070 64573 64584 TGATCCTGCACT 1-10-1MOE 878
147036 64684 64695 CCCAGTTCCCAG 1-10-1MOE 849
147046 65018 65029 CTGTGGTCAAAA 1-10-1MOE 858
147071 65557 65568 CTGATCCTGCAC 1-10-1MOE 856
147069 65695 65706 GATCCTGCACTG 1-10-1MOE 860
147047 66163 66174 ACTGTGGTCAAA 1-10-1MOE 833
147047 66309 66320 ACTGTGGTCAAA 1-10-1MOE 833
147028 67740 67751 CCAGCCTTGTCG 1-10-1MOE 846
147046 68870 68881 CTGTGGTCAAAA 1-10-1MOE 858
147047 68871 68882 ACTGTGGTCAAA 1-10-1MOE 833
147048 68872 68883 GACTGTGGTCAA 1-10-1MOE 888
147049 68873 68884 CGACTGTGGTCA 1-10-1MOE 854
147047 69017 69028 ACTGTGGTCAAA 1-10-1MOE 833
147048 69018 69029 GACTGTGGTCAA 1-10-1MOE 888
147049 69019 69030 CGACTGTGGTCA 1-10-1MOE 854
147071 69519 69530 CTGATCCTGCAC 1-10-1MOE 856
147073 69521 69532 CACTGATCCTGC 1-10-1MOE 842
147071 69665 69676 CTGATCCTGCAC 1-10-1MOE 856
147072 69666 69677 ACTGATCCTGCA 1-10-1MOE 832
147024 70466 70477 CCTTGTCGATCT 1-10-1MOE 853
147024 70612 70623 CCTTGTCGATCT 1-10-1MOE 853
147062 70761 70772 CACTGACGAGTC 1-10-1MOE 841
147072 70998 71009 ACTGATCCTGCA 1-10-1MOE 832
147073 70999 71010 CACTGATCCTGC 1-10-1MOE 842
147072 71144 71155 ACTGATCCTGCA 1-10-1MOE 832
147073 71145 71156 CACTGATCCTGC 1-10-1MOE 842
147048 71366 71377 GACTGTGGTCAA 1-10-1MOE 888
147048 71512 71523 GACTGTGGTCAA 1-10-1MOE 888
Table 18: the short antisense compounds of targeting SEQ ID NO:12
ISIS NO.5 ' target site3 ' target siteSequence (5 '-3 ')The Gapmer die body Seq ID NO
398163 20 31 ATGTCAACCGGC 1-10-1MOE 908
384545 23 34 CAAGTAGGATGT 1-10-1MOE 951
147705 159 170 CGGTTTTTGTTC 1-10-1MOE 1002
147703 245 256 TGGCTTCATGTC 1-10-1MOE 971
398090 283 296 TTGTTCTTAGGAAG 2-10-2MOE 972
147704 285 296 TTGTTCTTAGGA 1-10-1MOE 1012
147705 291 302 CGGTTTTTGTTC 1-10-1MOE 1002
147709 311 322 CCATTTTTATCA 1-10-1MOE 978
147733 349 360 TTCTTGATGTCC 1-10-1MOE 891
147707 360 371 TAGTCATTATCT 1-10-1MOE 977
147708 366 377 TTGATATAGTCA 1-10-1MOE 997
390030 381 392 TTTATAAAACTG 1-10-1MOE 1074
147709 386 397 CCATTTTTATCA 1-10-1MOE 978
147081 393 404 GCTCCTTCCACT 1-10-1MOE 1006
398091 393 406 GGGCTTCTTCCATT 2-10-2MOE 979
398166 395 406 GGGCTTCTTCCA 1-10-1MOE 1070
147709 418 429 CCATTTTTATCA 1-10-1MOE 978
147711 425 436 AAGGGCCCTGGG 1-10-1MOE 1040
147712 461 472 ACACCATCTCCC 1-10-1MOE 1005
147713 466 477 CTCCCACACCAT 1-10-1MOE 985
147714 471 482 TTCTGCTCCCAC 1-10-1MOE 986
147715 496 507 GTTGAGCATGAC 1-10-1MOE 1077
147716 521 532 TTAACGAGCCTT 1-10-1MOE 949
147717 574 585 ATCTTCAGAGAT 1-10-1MOE 996
147717 607 618 ATCTTCAGAGAT 1-10-1MOE 996
147708 612 623 TTGATATAGTCA 1-10-1MOE 997
147718 621 632 TAATATGACTTG 1-10-1MOE 998
147746 625 636 TAAAAACAACAA 1-10-1MOE 1073
398167 704 715 CAGGCCATGTGG 1-10-1MOE 1059
398092 705 718 AGTCAGGCCATGTG 2-10-2MOE 1060
147723 715 726 GACTCCAAAGTC 1-10-1MOE 892
398093 758 771 TCGGACTTTGAAAA 2-10-2MOE 1009
398168 760 771 TCGGACTTTGAA 1-10-1MOE 1008
147738 780 791 TGGGTGGCCGGG 1-10-1MOE 1069
398094 848 861 ATCAGCCAGACAGA 2-10-2MOE 1010
398169 849 860 TCAGCCAGACAG 1-10-1MOE 909
398164 873 884 TTGTCGATCTGC 1-10-1MOE 1014
147735 973 984 GGAGAAGCGCAG 1-10-1MOE 1016
147737 984 995 ACAGCCAGGTAG 1-10-1MOE 1067
368369 1025 1040 TCCTGCACTGACGAGT 3-10-3MOE 893
368372 1031 1046 CACTGATCCTGCACTG 3-10-3MOE 894
368353 1033 1046 CACTGATCCTGCAC 2-10-2MOE 1007
368354 1035 1048 TCCACTGATCCTGC 2-10-2MOE 1024
368388 1035 1050 CTTCCACTGATCCTTA 3-10-3MOE 895
368355 1036 1049 TTCCACTGATCCTG 2-10-2MOE 1025
368356 1037 1050 CTTCCACTGATCCT 2-10-2MOE 1027
368376 1037 1052 TCCTTCCACTGATCCT 3-10-3MOE 1028
147076 1038 1049 TTCCACTGATCC 1-10-1MOE 1029
368357 1038 1051 CCTTCCACTGATCC 2-10-2MOE 1046
147077 1039 1050 CTTCCACTGATC 1-10-1MOE 1047
368358 1039 1052 TCCTTCCACTGATC 2-10-2MOE 1031
368378 1039 1054 GCTCCTTCCACTGATC 3-10-3MOE 1032
368359 1041 1054 GCTCCTTCCACTGA 2-10-2MOE 1033
147080 1042 1053 CTCCTTCCACTG 1-10-1MOE 1021
147081 1043 1054 GCTCCTTCCACT 1-10-1MOE 1006
368360 1043 1056 AAGCTCCTTCCACT 2-10-2MOE 1035
368380 1043 1058 GAAAGCTCCTTCCACT 3-10-3MOE 896
147082 1044 1055 AGCTCCTTCCAC 1-10-1MOE 1036
368381 1045 1060 GGGAAAGCTCCTTCCA 3-10-3MOE 1037
147739 1107 1118 CGTTTGGGTGGC 1-10-1MOE 1023
147741 1165 1176 CACCCACTGGTG 1-10-1MOE 1055
398097 1194 1207 GGCAGTCTTTATCC 2-10-2MOE 897
147742 1273 1284 AACTTCAGTGTC 1-10-1MOE 1041
147743 1388 1399 AGGGCTTCCAGT 1-10-1MOE 1042
147744 1392 1403 AGGAAGGGCTTC 1-10-1MOE 1043
147745 1398 1409 TTGACCAGGAAG 1-10-1MOE 1058
398157 1455 1468 GGAAACATACCCTG 2-10-2MOE 1045
398167 1475 1486 CAGGCCATGTGG 1-10-1MOE 1059
398092 1476 1489 AGTCAGGCCATGTG 2-10-2MOE 1060
368357 1596 1609 CCTTCCACTGATCC 2-10-2MOE 1046
398160 1691 1704 GAATAGGTTAAGGC 2-10-2MOE 1048
398163 1711 1722 ATGTCAACCGGC 1-10-1MOE 908
147746 1750 1761 TAAAAACAACAA 1-10-1MOE 1073
389949 1777 1788 GCGCGAGCCCGA 1-10-1MOE 1061
398161 1790 1803 AACAATGTGTTGTA 2-10-2MOE 1049
147746 1799 1810 TAAAAACAACAA 1-10-1MOE 1073
398163 1819 1830 ATGTCAACCGGC 1-10-1MOE 908
389950 1848 1859 CCCTGAAGGTTC 1-10-1MOE 1063
398164 1889 1900 TTGTCGATCTGC 1-10-1MOE 1014
147702 1917 1928 CTGGTAAATAGC 1-10-1MOE 898
147088 1971 1982 CCCTCTACACCA 1-10-1MOE 1050
398102 2003 2016 CTACCTGAGGATTT 2-10-2MOE 899
398103 2010 2023 CCCAGTACTACCTG 2-10-2MOE 900
147737 2386 2397 ACAGCCAGGTAG 1-10-1MOE 1067
398095 2407 2420 CATCAGCAAGAGGC 2-10-2MOE 1011
398106 2441 2454 TGGAAAACTGCACC 2-10-2MOE 1068
147745 2497 2508 TTGACCAGGAAG 1-10-1MOE 1058
147712 2499 2510 ACACCATCTCCC 1-10-1MOE 1005
147712 2607 2618 ACACCATCTCCC 1-10-1MOE 1005
147745 2689 2700 TTGACCAGGAAG 1-10-1MOE 1058
398167 2706 2717 CAGGCCATGTGG 1-10-1MOE 1059
398092 2707 2720 AGTCAGGCCATGTG 2-10-2MOE 1060
398166 2966 2977 GGGCTTCTTCCA 1-10-1MOE 1070
147091 2992 3003 GTTCCCTCTACA 1-10-1MOE 1004
147092 2993 3004 TGTTCCCTCTAC 1-10-1MOE 901
389949 3008 3019 GCGCGAGCCCGA 1-10-1MOE 1061
147087 3149 3160 CCTCTACACCAG 1-10-1MOE 982
147088 3150 3161 CCCTCTACACCA 1-10-1MOE 1050
398113 3160 3173 AGGAGGTTAAACCA 2-10-2MOE 905
147087 3257 3268 CCTCTACACCAG 1-10-1MOE 982
147088 3258 3269 CCCTCTACACCA 1-10-1MOE 1050
147737 3591 3602 ACAGCCAGGTAG 1-10-1MOE 1067
147737 3617 3628 ACAGCCAGGTAG 1-10-1MOE 1067
147079 3637 3648 TCCTTCCACTGA 1-10-1MOE 1001
147080 3638 3649 CTCCTTCCACTG 1-10-1MOE 1021
398095 3638 3651 CATCAGCAAGAGGC 2-10-2MOE 1011
398106 3672 3685 TGGAAAACTGCACC 2-10-2MOE 1068
398107 3678 3691 TATTCCTGGAAAAC 2-10-2MOE 902
147691 3806 3817 GAGGTGGGAAAA 1-10-1MOE 966
147683 3848 3859 GCTTACGATTGT 1-10-1MOE 922
147738 3853 3864 TGGGTGGCCGGG 1-10-1MOE 1069
398167 3926 3937 CAGGCCATGTGG 1-10-1MOE 1059
398109 3945 3958 CAAGAAGTGTGGTT 2-10-2MOE 903
398167 4034 4045 CAGGCCATGTGG 1-10-1MOE 1059
398110 4083 4096 GTTCCCTTTGCAGG 2-10-2MOE 952
398111 4168 4181 GTGAAAATGCTGGC 2-10-2MOE 904
147706 4238 4249 GCTGACATCTCG 1-10-1MOE 1071
398112 4282 4295 CAGCCTGGCACCTA 2-10-2MOE 1072
147746 4315 4326 TAAAAACAACAA 1-10-1MOE 1073
398113 4391 4404 AGGAGGTTAAACCA 2-10-2MOE 905
398115 4484 4497 AGTAAATATTGGCT 2-10-2MOE 1076
390030 4491 4502 TTTATAAAACTG 1-10-1MOE 1074
390030 4537 4548 TTTATAAAACTG 1-10-1MOE 1074
147703 5034 5045 TGGCTTCATGTC 1-10-1MOE 971
147684 5035 5046 ACCCAGTCAGGG 1-10-1MOE 964
398125 5075 5088 CAGTAAGGAATTTT 2-10-2MOE 913
147696 5083 5094 TGGATGATTGGC 1-10-1MOE 906
147684 5143 5154 ACCCAGTCAGGG 1-10-1MOE 964
147712 5366 5377 ACACCATCTCCC 1-10-1MOE 1005
147714 5416 5427 TTCTGCTCCCAC 1-10-1MOE 986
398128 5443 5456 CTAAATTTAGTTCA 2-10-2MOE 911
147712 5474 5485 ACACCATCTCCC 1-10-1MOE 1005
147746 5498 5509 TAAAAACAACAA 1-10-1MOE 1073
147714 5524 5535 TTCTGCTCCCAC 1-10-1MOE 986
147736 5600 5611 AGGTAGGAGAAG 1-10-1MOE 963
147085 5762 5773 TCTACACCAGGT 1-10-1MOE 961
147679 5825 5836 CAAAAGGATCCC 1-10-1MOE 907
390030 6803 6814 TTTATAAAACTG 1-10-1MOE 1074
398142 6885 6898 CCAGCACACTGGAA 2-10-2MOE 923
398142 6994 7007 CCAGCACACTGGAA 2-10-2MOE 923
398166 7306 7317 GGGCTTCTTCCA 1-10-1MOE 1070
147684 7551 7562 ACCCAGTCAGGG 1-10-1MOE 964
147085 8308 8319 TCTACACCAGGT 1-10-1MOE 961
147085 8416 8427 TCTACACCAGGT 1-10-1MOE 961
398163 8473 8484 ATGTCAACCGGC 1-10-1MOE 908
147718 8523 8534 TAATATGACTTG 1-10-1MOE 998
147718 8631 8642 TAATATGACTTG 1-10-1MOE 998
147691 8806 8817 GAGGTGGGAAAA 1-10-1MOE 966
147728 8835 8846 GCCAGACAGAAG 1-10-1MOE 1013
147728 8943 8954 GCCAGACAGAAG 1-10-1MOE 1013
398169 8946 8957 TCAGCCAGACAG 1-10-1MOE 909
147742 9060 9071 AACTTCAGTGTC 1-10-1MOE 1041
404136 9162 9175 TAAGTGTCCCTTTG 2-10-2MOE 910
147746 9963 9974 TAAAAACAACAA 1-10-1MOE 1073
147746 9966 9977 TAAAAACAACAA 1-10-1MOE 1073
147746 9969 9980 TAAAAACAACAA 1-10-1MOE 1073
147746 9991 10002 TAAAAACAACAA 1-10-1MOE 1073
147746 10071 10082 TAAAAACAACAA 1-10-1MOE 1073
147746 10074 10085 TAAAAACAACAA 1-10-1MOE 1073
147746 10077 10088 TAAAAACAACAA 1-10-1MOE 1073
390030 10170 10181 TTTATAAAACTG 1-10-1MOE 1074
147084 10220 10231 CTACACCAGGTC 1-10-1MOE 993
390030 10278 10289 TTTATAAAACTG 1-10-1MOE 1074
147085 10329 10340 TCTACACCAGGT 1-10-1MOE 961
147711 10684 10695 AAGGGCCCTGGG 1-10-1MOE 1040
147711 10792 10803 AAGGGCCCTGGG 1-10-1MOE 1040
398128 11333 11346 CTAAATTTAGTTCA 2-10-2MOE 911
147707 11960 11971 TAGTCATTATCT 1-10-1MOE 977
147707 11965 11976 TAGTCATTATCT 1-10-1MOE 977
147090 12013 12024 TTCCCTCTACAC 1-10-1MOE 955
398096 12146 12159 GGAGAAGCGCAGCT 2-10-2MOE 1015
398166 12214 12225 GGGCTTCTTCCA 1-10-1MOE 1070
398135 12308 12321 GACTACATTTTACA 2-10-2MOE 912
147741 12389 12400 CACCCACTGGTG 1-10-1MOE 1055
398125 12431 12444 CAGTAAGGAATTTT 2-10-2MOE 913
147714 12585 12596 TTCTGCTCCCAC 1-10-1MOE 986
147718 12594 12605 TAATATGACTTG 1-10-1MOE 998
398125 12612 12625 CAGTAAGGAATTTT 2-10-2MOE 913
147737 12803 12814 ACAGCCAGGTAG 1-10-1MOE 1067
147746 12876 12887 TAAAAACAACAA 1-10-1MOE 1073
147691 12900 12911 GAGGTGGGAAAA 1-10-1MOE 966
398137 13111 13124 TGTGTCCCTCAGTC 2-10-2MOE 914
398138 13254 13267 AACATCAAGCTTGA 2-10-2MOE 931
398137 13292 13305 TGTGTCCCTCAGTC 2-10-2MOE 914
398138 13435 13448 AACATCAAGCTTGA 2-10-2MOE 931
389764 14020 14031 CTGCAACATGAT 1-9-2MOE 1018
389948 14067 14078 CCGTTGGACCCC 1-10-1MOE 915
389948 14248 14259 CCGTTGGACCCC 1-10-1MOE 915
147738 14279 14290 TGGGTGGCCGGG 1-10-1MOE 1069
147698 14572 14583 CCCGCCACCACC 1-10-1MOE 928
147717 14750 14761 ATCTTCAGAGAT 1-10-1MOE 996
147717 14932 14943 ATCTTCAGAGAT 1-10-1MOE 996
398167 15374 15385 CAGGCCATGTGG 1-10-1MOE 1059
147736 16444 16455 AGGTAGGAGAAG 1-10-1MOE 963
147746 16510 16521 TAAAAACAACAA 1-10-1MOE 1073
147738 16590 16601 TGGGTGGCCGGG 1-10-1MOE 1069
147746 16676 16687 TAAAAACAACAA 1-10-1MOE 1073
398167 16797 16808 CAGGCCATGTGG 1-10-1MOE 1059
398144 16911 16924 GACAGCTTCTATAA 2-10-2MOE 916
389764 17096 17107 CTGCAACATGAT 1-9-2MOE 1018
147709 17238 17249 CCATTTTTATCA 1-10-1MOE 978
147709 17406 17417 CCATTTTTATCA 1-10-1MOE 978
147695 17466 17477 TCATTCCCCACT 1-10-1MOE 984
147746 17497 17508 TAAAAACAACAA 1-10-1MOE 1073
147088 17539 17550 CCCTCTACACCA 1-10-1MOE 1050
147711 17808 17819 AAGGGCCCTGGG 1-10-1MOE 1040
147711 17976 17987 AAGGGCCCTGGG 1-10-1MOE 1040
398139 18049 18062 AGTGACTGACCACA 2-10-2MOE 917
398139 18217 18230 AGTGACTGACCACA 2-10-2MOE 917
398140 18596 18609 GTAGCATAGAGCCT 2-10-2MOE 918
398140 18764 18777 GTAGCATAGAGCCT 2-10-2MOE 918
398167 18927 18938 CAGGCCATGTGG 1-10-1MOE 1059
398141 18947 18960 CAGATCTTGTCAAG 2-10-2MOE 919
398167 19095 19106 CAGGCCATGTGG 1-10-1MOE 1059
398141 19115 19128 CAGATCTTGTCAAG 2-10-2MOE 919
147746 19207 19218 TAAAAACAACAA 1-10-1MOE 1073
147711 19508 19519 AAGGGCCCTGGG 1-10-1MOE 1040
147729 19554 19565 GTAAGAGGCAGG 1-10-1MOE 920
147718 19617 19628 TAATATGACTTG 1-10-1MOE 998
390030 19618 19629 TTTATAAAACTG 1-10-1MOE 1074
147701 19671 19682 CCATGGCGGGAC 1-10-1MOE 921
147711 19676 19687 AAGGGCCCTGGG 1-10-1MOE 1040
147718 19785 19796 TAATATGACTTG 1-10-1MOE 998
147079 20515 20526 TCCTTCCACTGA 1-10-1MOE 1001
389764 20620 20631 CTGCAACATGAT 1-9-2MOE 1018
398142 20653 20666 CCAGCACACTGGAA 2-10-2MOE 923
147078 20682 20693 CCTTCCACTGAT 1-10-1MOE 1044
147079 20683 20694 TCCTTCCACTGA 1-10-1MOE 1001
147080 20704 20715 CTCCTTCCACTG 1-10-1MOE 1021
147081 20705 20716 GCTCCTTCCACT 1-10-1MOE 1006
389965 20788 20799 CTGCAACATGAT 1-10-1MOE 1018
147746 20870 20881 TAAAAACAACAA 1-10-1MOE 1073
147746 21038 21049 TAAAAACAACAA 1-10-1MOE 1073
147717 21080 21091 ATCTTCAGAGAT 1-10-1MOE 996
147076 21222 21233 TTCCACTGATCC 1-10-1MOE 1029
398094 21441 21454 ATCAGCCAGACAGA 2-10-2MOE 1010
147746 21633 21644 TAAAAACAACAA 1-10-1MOE 1073
147738 21884 21895 TGGGTGGCCGGG 1-10-1MOE 1069
147683 21939 21950 GCTTACGATTGT 1-10-1MOE 922
147743 22213 22224 AGGGCTTCCAGT 1-10-1MOE 1042
147736 22759 22770 AGGTAGGAGAAG 1-10-1MOE 963
147736 22927 22938 AGGTAGGAGAAG 1-10-1MOE 963
398142 23008 23021 CCAGCACACTGGAA 2-10-2MOE 923
398147 23784 23797 CTACAGGACAATAC 2-10-2MOE 957
398147 23952 23965 CTACAGGACAATAC 2-10-2MOE 957
147713 24434 24445 CTCCCACACCAT 1-10-1MOE 985
389965 24543 24554 CTGCAACATGAT 1-10-1MOE 1018
147713 24602 24613 CTCCCACACCAT 1-10-1MOE 985
389965 24711 24722 CTGCAACATGAT 1-10-1MOE 1018
147746 25384 25395 TAAAAACAACAA 1-10-1MOE 1073
398143 25505 25518 GTCAGTCCCAGCTA 2-10-2MOE 924
147691 25610 25621 GAGGTGGGAAAA 1-10-1MOE 966
398130 25672 25685 TTAGTATGACAGCT 2-10-2MOE 925
147746 25810 25821 TAAAAACAACAA 1-10-1MOE 1073
147746 25978 25989 TAAAAACAACAA 1-10-1MOE 1073
147746 26172 26183 TAAAAACAACAA 1-10-1MOE 1073
398151 26718 26731 TCAGTGTAGGAAGA 2-10-2MOE 926
147728 26917 26928 GCCAGACAGAAG 1-10-1MOE 1013
398152 27708 27721 TGAATATACAGATG 2-10-2MOE 927
147698 28629 28640 CCCGCCACCACC 1-10-1MOE 928
389965 28714 28725 CTGCAACATGAT 1-10-1MOE 1018
389764 28714 28725 CTGCAACATGAT 1-9-2MOE 1018
389764 28861 28872 CTGCAACATGAT 1-9-2MOE 1018
390030 29945 29956 TTTATAAAACTG 1-10-1MOE 1074
147744 30654 30665 AGGAAGGGCTTC 1-10-1MOE 1043
147093 30836 30847 TTGTTCCCTCTA 1-10-1MOE 929
147746 30957 30968 TAAAAACAACAA 1-10-1MOE 1073
147746 31105 31116 TAAAAACAACAA 1-10-1MOE 1073
390030 31477 31488 TTTATAAAACTG 1-10-1MOE 1074
384545 31829 31840 CAAGTAGGATGT 1-10-1MOE 951
384545 31977 31988 CAAGTAGGATGT 1-10-1MOE 951
401382 32094 32107 TCTACCTGAGTCCA 2-10-2MOE 930
147089 32387 32398 TCCCTCTACACC 1-10-1MOE 956
389950 32949 32960 CCCTGAAGGTTC 1-10-1MOE 1063
398165 33002 33013 GTTCTTAGGAAG 1-10-1MOE 968
147081 33073 33084 GCTCCTTCCACT 1-10-1MOE 1006
147082 33074 33085 AGCTCCTTCCAC 1-10-1MOE 1036
389950 33097 33108 CCCTGAAGGTTC 1-10-1MOE 1063
147736 33160 33171 AGGTAGGAGAAG 1-10-1MOE 963
147081 33221 33232 GCTCCTTCCACT 1-10-1MOE 1006
368360 33221 33234 AAGCTCCTTCCACT 2-10-2MOE 1035
147082 33222 33233 AGCTCCTTCCAC 1-10-1MOE 1036
398138 33244 33257 AACATCAAGCTTGA 2-10-2MOE 931
147746 33250 33261 TAAAAACAACAA 1-10-1MOE 1073
398138 33392 33405 AACATCAAGCTTGA 2-10-2MOE 931
401383 33588 33601 GATCACCTTCAGAG 2-10-2MOE 932
147746 33886 33897 TAAAAACAACAA 1-10-1MOE 1073
147746 34606 34617 TAAAAACAACAA 1-10-1MOE 1073
398165 34704 34715 GTTCTTAGGAAG 1-10-1MOE 968
147717 34745 34756 ATCTTCAGAGAT 1-10-1MOE 996
147746 34754 34765 TAAAAACAACAA 1-10-1MOE 1073
398165 34852 34863 GTTCTTAGGAAG 1-10-1MOE 968
147717 34893 34904 ATCTTCAGAGAT 1-10-1MOE 996
401384 34905 34918 TGAACACATCACTA 2-10-2MOE 933
147738 35391 35402 TGGGTGGCCGGG 1-10-1MOE 1069
147736 35396 35407 AGGTAGGAGAAG 1-10-1MOE 963
147738 35539 35550 TGGGTGGCCGGG 1-10-1MOE 1069
147691 35554 35565 GAGGTGGGAAAA 1-10-1MOE 966
147691 35702 35713 GAGGTGGGAAAA 1-10-1MOE 966
147746 35814 35825 TAAAAACAACAA 1-10-1MOE 1073
401385 36109 36122 CCCAGTGGGTTTGA 2-10-2MOE 890
147691 36360 36371 GAGGTGGGAAAA 1-10-1MOE 966
147746 36416 36427 TAAAAACAACAA 1-10-1MOE 1073
147731 36620 36631 TTTCCTCTTGTC 1-10-1MOE 934
147714 37881 37892 TTCTGCTCCCAC 1-10-1MOE 986
147714 38029 38040 TTCTGCTCCCAC 1-10-1MOE 986
147681 38512 38523 ATGTCATTAAAC 1-10-1MOE 965
401386 38516 38529 TAATTGATGTCAAT 2-10-2MOE 935
401387 38518 38531 AGTAATTGATGTCA 2-10-2MOE 936
401388 38520 38533 ACAGTAATTGATGT 2-10-2MOE 937
401389 38522 38535 TTACAGTAATTGAT 2-10-2MOE 938
401390 38524 38537 ACTTACAGTAATTG 2-10-2MOE 939
401391 38526 38539 AGACTTACAGTAAT 2-10-2MOE 940
401392 38528 38541 TCAGACTTACAGTA 2-10-2MOE 941
401393 38530 38543 AATCAGACTTACAG 2-10-2MOE 942
401394 38532 38545 TGAATCAGACTTAC 2-10-2MOE 943
401395 38534 38547 AATGAATCAGACTT 2-10-2MOE 944
147738 38909 38920 TGGGTGGCCGGG 1-10-1MOE 1069
147738 39057 39068 TGGGTGGCCGGG 1-10-1MOE 1069
390030 39249 39260 TTTATAAAACTG 1-10-1MOE 1074
390030 39397 39408 TTTATAAAACTG 1-10-1MOE 1074
401396 39488 39501 TGCAGGATGTTGAG 2-10-2MOE 945
147717 39545 39556 ATCTTCAGAGAT 1-10-1MOE 996
147746 39641 39652 TAAAAACAACAA 1-10-1MOE 1073
147717 39693 39704 ATCTTCAGAGAT 1-10-1MOE 996
147746 39729 39740 TAAAAACAACAA 1-10-1MOE 1073
147746 39877 39888 TAAAAACAACAA 1-10-1MOE 1073
147746 40185 40196 TAAAAACAACAA 1-10-1MOE 1073
147746 40478 40489 TAAAAACAACAA 1-10-1MOE 1073
398166 40589 40600 GGGCTTCTTCCA 1-10-1MOE 1070
147735 40662 40673 GGAGAAGCGCAG 1-10-1MOE 1016
147746 40706 40717 TAAAAACAACAA 1-10-1MOE 1073
398166 40737 40748 GGGCTTCTTCCA 1-10-1MOE 1070
147746 40854 40865 TAAAAACAACAA 1-10-1MOE 1073
401397 41012 41025 CTGGTCAGCATTGA 2-10-2MOE 946
147718 41070 41081 TAATATGACTTG 1-10-1MOE 998
147718 41218 41229 TAATATGACTTG 1-10-1MOE 998
147717 41221 41232 ATCTTCAGAGAT 1-10-1MOE 996
147717 41369 41380 ATCTTCAGAGAT 1-10-1MOE 996
147717 41599 41610 ATCTTCAGAGAT 1-10-1MOE 996
147717 41747 41758 ATCTTCAGAGAT 1-10-1MOE 996
401398 41768 41781 CAAAGTCCCTTAGC 2-10-2MOE 947
390030 42056 42067 TTTATAAAACTG 1-10-1MOE 1074
398153 42157 42170 ATTTCTCTTACAGG 2-10-2MOE 948
398153 42305 42318 ATTTCTCTTACAGG 2-10-2MOE 948
147710 42691 42702 TATAGCTCCTCT 1-10-1MOE 994
147079 43322 43333 TCCTTCCACTGA 1-10-1MOE 1001
147080 43323 43334 CTCCTTCCACTG 1-10-1MOE 1021
147716 43477 43488 TTAACGAGCCTT 1-10-1MOE 949
147746 43992 44003 TAAAAACAACAA 1-10-1MOE 1073
147736 44137 44148 AGGTAGGAGAAG 1-10-1MOE 963
384545 44242 44253 CAAGTAGGATGT 1-10-1MOE 951
147687 44354 44365 CGACACGGGAAC 1-10-1MOE 950
384545 44390 44401 CAAGTAGGATGT 1-10-1MOE 951
398110 44713 44726 GTTCCCTTTGCAGG 2-10-2MOE 952
147705 45092 45103 CGGTTTTTGTTC 1-10-1MOE 1002
147705 45240 45251 CGGTTTTTGTTC 1-10-1MOE 1002
147074 45977 45988 CCACTGATCCTG 1-10-1MOE 845
147075 45978 45989 TCCACTGATCCT 1-10-1MOE 1026
147076 45979 45990 TTCCACTGATCC 1-10-1MOE 1029
147076 46127 46138 TTCCACTGATCC 1-10-1MOE 1029
401399 46247 46260 ATTAGCCATATCTC 2-10-2MOE 953
147705 46555 46566 CGGTTTTTGTTC 1-10-1MOE 1002
147714 46685 46696 TTCTGCTCCCAC 1-10-1MOE 986
147705 46703 46714 CGGTTTTTGTTC 1-10-1MOE 1002
390030 46859 46870 TTTATAAAACTG 1-10-1MOE 1074
390030 46933 46944 TTTATAAAACTG 1-10-1MOE 1074
147681 46984 46995 ATGTCATTAAAC 1-10-1MOE 965
390030 47007 47018 TTTATAAAACTG 1-10-1MOE 1074
147746 47023 47034 TAAAAACAACAA 1-10-1MOE 1073
390030 47081 47092 TTTATAAAACTG 1-10-1MOE 1074
147681 47132 47143 ATGTCATTAAAC 1-10-1MOE 965
147746 47171 47182 TAAAAACAACAA 1-10-1MOE 1073
401400 47411 47424 AGCATTCAGCAGTG 2-10-2MOE 954
147746 47461 47472 TAAAAACAACAA 1-10-1MOE 1073
147086 47608 47619 CTCTACACCAGG 1-10-1MOE 969
147087 47609 47620 CCTCTACACCAG 1-10-1MOE 982
147088 47610 47621 CCCTCTACACCA 1-10-1MOE 1050
147090 47612 47623 TTCCCTCTACAC 1-10-1MOE 955
147691 47729 47740 GAGGTGGGAAAA 1-10-1MOE 966
147086 47756 47767 CTCTACACCAGG 1-10-1MOE 969
147088 47758 47769 CCCTCTACACCA 1-10-1MOE 1050
147089 47759 47770 TCCCTCTACACC 1-10-1MOE 956
390030 47847 47858 TTTATAAAACTG 1-10-1MOE 1074
390030 47995 48006 TTTATAAAACTG 1-10-1MOE 1074
147691 48393 48404 GAGGTGGGAAAA 1-10-1MOE 966
398147 48887 48900 CTACAGGACAATAC 2-10-2MOE 957
147706 49133 49144 GCTGACATCTCG 1-10-1MOE 1071
147706 49281 49292 GCTGACATCTCG 1-10-1MOE 1071
398168 49742 49753 TCGGACTTTGAA 1-10-1MOE 1008
401401 49791 49804 AACTGGGTTAAGTA 2-10-2MOE 958
147689 49936 49947 CAGAGAAGGTCT 1-10-1MOE 987
401402 50192 50205 TGAACACGCTATCC 2-10-2MOE 959
398117 50241 50254 TTTCCACTTGGGTG 2-10-2MOE 960
147736 50582 50593 AGGTAGGAGAAG 1-10-1MOE 963
398168 50703 50714 TCGGACTTTGAA 1-10-1MOE 1008
398168 50849 50860 TCGGACTTTGAA 1-10-1MOE 1008
147746 51019 51030 TAAAAACAACAA 1-10-1MOE 1073
147708 51101 51112 TTGATATAGTCA 1-10-1MOE 997
147746 51178 51189 TAAAAACAACAA 1-10-1MOE 1073
147708 51247 51258 TTGATATAGTCA 1-10-1MOE 997
147083 51281 51292 TACACCAGGTCA 1-10-1MOE 973
147081 51287 51298 GCTCCTTCCACT 1-10-1MOE 1006
147082 51288 51299 AGCTCCTTCCAC 1-10-1MOE 1036
147746 51331 51342 TAAAAACAACAA 1-10-1MOE 1073
147085 51416 51427 TCTACACCAGGT 1-10-1MOE 961
147083 51427 51438 TACACCAGGTCA 1-10-1MOE 973
147081 51433 51444 GCTCCTTCCACT 1-10-1MOE 1006
147082 51434 51445 AGCTCCTTCCAC 1-10-1MOE 1036
147728 51522 51533 GCCAGACAGAAG 1-10-1MOE 1013
147085 51562 51573 TCTACACCAGGT 1-10-1MOE 961
147081 51633 51644 GCTCCTTCCACT 1-10-1MOE 1006
368360 51633 51646 AAGCTCCTTCCACT 2-10-2MOE 1035
147082 51634 51645 AGCTCCTTCCAC 1-10-1MOE 1036
368361 51635 51648 GAAAGCTCCTTCCA 2-10-2MOE 962
368360 51779 51792 AAGCTCCTTCCACT 2-10-2MOE 1035
147082 51780 51791 AGCTCCTTCCAC 1-10-1MOE 1036
147736 51859 51870 AGGTAGGAGAAG 1-10-1MOE 963
147684 51867 51878 ACCCAGTCAGGG 1-10-1MOE 964
147746 51918 51929 TAAAAACAACAA 1-10-1MOE 1073
147077 51988 51999 CTTCCACTGATC 1-10-1MOE 1047
147746 52064 52075 TAAAAACAACAA 1-10-1MOE 1073
147084 52125 52136 CTACACCAGGTC 1-10-1MOE 993
147079 52136 52147 TCCTTCCACTGA 1-10-1MOE 1001
147681 52231 52242 ATGTCATTAAAC 1-10-1MOE 965
147084 52271 52282 CTACACCAGGTC 1-10-1MOE 993
147691 52312 52323 GAGGTGGGAAAA 1-10-1MOE 966
401403 52318 52331 TTTCCTAGGAGGTG 2-10-2MOE 967
398167 52527 52538 CAGGCCATGTGG 1-10-1MOE 1059
147703 52670 52681 TGGCTTCATGTC 1-10-1MOE 971
398167 52673 52684 CAGGCCATGTGG 1-10-1MOE 1059
398165 52708 52719 GTTCTTAGGAAG 1-10-1MOE 968
398090 52708 52721 TTGTTCTTAGGAAG 2-10-2MOE 972
147705 52716 52727 CGGTTTTTGTTC 1-10-1MOE 1002
147682 52717 52728 CGGGTACTATGG 1-10-1MOE 992
398167 52762 52773 CAGGCCATGTGG 1-10-1MOE 1059
147703 52816 52827 TGGCTTCATGTC 1-10-1MOE 971
398090 52854 52867 TTGTTCTTAGGAAG 2-10-2MOE 972
147704 52856 52867 TTGTTCTTAGGA 1-10-1MOE 1012
147705 52862 52873 CGGTTTTTGTTC 1-10-1MOE 1002
398167 52908 52919 CAGGCCATGTGG 1-10-1MOE 1059
147084 53704 53715 CTACACCAGGTC 1-10-1MOE 993
147088 53708 53719 CCCTCTACACCA 1-10-1MOE 1050
147083 53849 53860 TACACCAGGTCA 1-10-1MOE 973
147084 53850 53861 CTACACCAGGTC 1-10-1MOE 993
147086 53852 53863 CTCTACACCAGG 1-10-1MOE 969
147088 53854 53865 CCCTCTACACCA 1-10-1MOE 1050
398167 53870 53881 CAGGCCATGTGG 1-10-1MOE 1059
147703 54137 54148 TGGCTTCATGTC 1-10-1MOE 971
398155 54172 54185 TGTTTTTACACAGA 2-10-2MOE 970
390030 54263 54274 TTTATAAAACTG 1-10-1MOE 1074
147705 54275 54286 CGGTTTTTGTTC 1-10-1MOE 1002
147703 54283 54294 TGGCTTCATGTC 1-10-1MOE 971
390030 54409 54420 TTTATAAAACTG 1-10-1MOE 1074
147704 54965 54976 TTGTTCTTAGGA 1-10-1MOE 1012
147705 54971 54982 CGGTTTTTGTTC 1-10-1MOE 1002
398090 55109 55122 TTGTTCTTAGGAAG 2-10-2MOE 972
147705 55117 55128 CGGTTTTTGTTC 1-10-1MOE 1002
147083 55206 55217 TACACCAGGTCA 1-10-1MOE 973
147084 55207 55218 CTACACCAGGTC 1-10-1MOE 993
147084 55353 55364 CTACACCAGGTC 1-10-1MOE 993
147705 55524 55535 CGGTTTTTGTTC 1-10-1MOE 1002
147685 55602 55613 GGCTGACATTCA 1-10-1MOE 975
401404 55638 55651 TGAGCTACAGTAGG 2-10-2MOE 974
147685 55748 55759 GGCTGACATTCA 1-10-1MOE 975
147712 55819 55830 ACACCATCTCCC 1-10-1MOE 1005
147712 55965 55976 ACACCATCTCCC 1-10-1MOE 1005
147707 56300 56311 TAGTCATTATCT 1-10-1MOE 977
147708 56306 56317 TTGATATAGTCA 1-10-1MOE 997
390030 56321 56332 TTTATAAAACTG 1-10-1MOE 1074
147709 56326 56337 CCATTTTTATCA 1-10-1MOE 978
398091 56333 56346 GGGCTTCTTCCATT 2-10-2MOE 979
401405 56408 56421 TGGTCAACTGAAAG 2-10-2MOE 976
147707 56446 56457 TAGTCATTATCT 1-10-1MOE 977
147708 56452 56463 TTGATATAGTCA 1-10-1MOE 997
147709 56472 56483 CCATTTTTATCA 1-10-1MOE 978
398091 56479 56492 GGGCTTCTTCCATT 2-10-2MOE 979
401406 56570 56583 GGTGTGGATAACAG 2-10-2MOE 980
368366 56664 56677 CTGATCCTTAGAAG 2-10-2MOE 1019
398148 57157 57170 TCATAACTATTAAG 2-10-2MOE 981
147082 57220 57231 AGCTCCTTCCAC 1-10-1MOE 1036
398148 57303 57316 TCATAACTATTAAG 2-10-2MOE 981
147082 57366 57377 AGCTCCTTCCAC 1-10-1MOE 1036
147743 57758 57769 AGGGCTTCCAGT 1-10-1MOE 1042
398093 57963 57976 TCGGACTTTGAAAA 2-10-2MOE 1009
398093 58109 58122 TCGGACTTTGAAAA 2-10-2MOE 1009
147735 58279 58290 GGAGAAGCGCAG 1-10-1MOE 1016
147087 58821 58832 CCTCTACACCAG 1-10-1MOE 982
147087 58967 58978 CCTCTACACCAG 1-10-1MOE 982
390030 59180 59191 TTTATAAAACTG 1-10-1MOE 1074
390030 59326 59337 TTTATAAAACTG 1-10-1MOE 1074
147711 59357 59368 AAGGGCCCTGGG 1-10-1MOE 1040
147743 59382 59393 AGGGCTTCCAGT 1-10-1MOE 1042
147711 59503 59514 AAGGGCCCTGGG 1-10-1MOE 1040
147711 59675 59686 AAGGGCCCTGGG 1-10-1MOE 1040
401407 59710 59723 CAGCTTAGGCAGAG 2-10-2MOE 983
147712 59711 59722 ACACCATCTCCC 1-10-1MOE 1005
147713 59716 59727 CTCCCACACCAT 1-10-1MOE 985
147714 59721 59732 TTCTGCTCCCAC 1-10-1MOE 986
147695 59722 59733 TCATTCCCCACT 1-10-1MOE 984
147715 59746 59757 GTTGAGCATGAC 1-10-1MOE 1077
147711 59821 59832 AAGGGCCCTGGG 1-10-1MOE 1040
390030 59847 59858 TTTATAAAACTG 1-10-1MOE 1074
147712 59857 59868 ACACCATCTCCC 1-10-1MOE 1005
147713 59862 59873 CTCCCACACCAT 1-10-1MOE 985
147714 59867 59878 TTCTGCTCCCAC 1-10-1MOE 986
390030 59993 60004 TTTATAAAACTG 1-10-1MOE 1074
389949 60471 60482 GCGCGAGCCCGA 1-10-1MOE 1061
147746 60619 60630 TAAAAACAACAA 1-10-1MOE 1073
147689 61113 61124 CAGAGAAGGTCT 1-10-1MOE 987
398105 61267 61280 TGCACAGGCAGGTT 2-10-2MOE 1066
147680 61473 61484 GTATGCACTGCT 1-10-1MOE 988
147080 61757 61768 CTCCTTCCACTG 1-10-1MOE 1021
147078 61901 61912 CCTTCCACTGAT 1-10-1MOE 1044
147079 61902 61913 TCCTTCCACTGA 1-10-1MOE 1001
147088 62215 62226 CCCTCTACACCA 1-10-1MOE 1050
401408 62600 62613 CAATGAAGCACAGG 2-10-2MOE 989
147688 62843 62854 TCCCAAACAAAT 1-10-1MOE 990
147746 63102 63113 TAAAAACAACAA 1-10-1MOE 1073
147746 63248 63259 TAAAAACAACAA 1-10-1MOE 1073
401409 63430 63443 ATTCTTAACACAGA 2-10-2MOE 991
147682 63483 63494 CGGGTACTATGG 1-10-1MOE 992
147084 63677 63688 CTACACCAGGTC 1-10-1MOE 993
147710 64847 64858 TATAGCTCCTCT 1-10-1MOE 994
147710 64993 65004 TATAGCTCCTCT 1-10-1MOE 994
147746 65151 65162 TAAAAACAACAA 1-10-1MOE 1073
401410 65263 65276 CATTTAGGGTCTAA 2-10-2MOE 995
147717 65862 65873 ATCTTCAGAGAT 1-10-1MOE 996
147717 65895 65906 ATCTTCAGAGAT 1-10-1MOE 996
147708 65900 65911 TTGATATAGTCA 1-10-1MOE 997
147718 65909 65920 TAATATGACTTG 1-10-1MOE 998
147717 66008 66019 ATCTTCAGAGAT 1-10-1MOE 996
147717 66041 66052 ATCTTCAGAGAT 1-10-1MOE 996
147708 66046 66057 TTGATATAGTCA 1-10-1MOE 997
147718 66055 66066 TAATATGACTTG 1-10-1MOE 998
401411 66123 66136 AGCCGCCTGAAGTG 2-10-2MOE 999
147697 66497 66508 CCCCAGCAGCGG 1-10-1MOE 1000
368377 66562 66577 CTCCTTCCACTGATCC 3-10-3MOE 1030
147077 66563 66574 CTTCCACTGATC 1-10-1MOE 1047
368358 66563 66576 TCCTTCCACTGATC 2-10-2MOE 1031
147078 66564 66575 CCTTCCACTGAT 1-10-1MOE 1044
147079 66565 66576 TCCTTCCACTGA 1-10-1MOE 1001
147080 66566 66577 CTCCTTCCACTG 1-10-1MOE 1021
147697 66643 66654 CCCCAGCAGCGG 1-10-1MOE 1000
368358 66709 66722 TCCTTCCACTGATC 2-10-2MOE 1031
147078 66710 66721 CCTTCCACTGAT 1-10-1MOE 1044
147079 66711 66722 TCCTTCCACTGA 1-10-1MOE 1001
147075 66999 67010 TCCACTGATCCT 1-10-1MOE 1026
147705 67067 67078 CGGTTTTTGTTC 1-10-1MOE 1002
147088 67409 67420 CCCTCTACACCA 1-10-1MOE 1050
147080 67430 67441 CTCCTTCCACTG 1-10-1MOE 1021
147082 67432 67443 AGCTCCTTCCAC 1-10-1MOE 1036
147737 67455 67466 ACAGCCAGGTAG 1-10-1MOE 1067
147088 67555 67566 CCCTCTACACCA 1-10-1MOE 1050
147082 67578 67589 AGCTCCTTCCAC 1-10-1MOE 1036
401412 67637 67650 TAAATCCTCTAGCA 2-10-2MOE 1003
147091 67729 67740 GTTCCCTCTACA 1-10-1MOE 1004
147742 67737 67748 AACTTCAGTGTC 1-10-1MOE 1041
147712 68527 68538 ACACCATCTCCC 1-10-1MOE 1005
147712 68673 68684 ACACCATCTCCC 1-10-1MOE 1005
147711 68760 68771 AAGGGCCCTGGG 1-10-1MOE 1040
147711 68906 68917 AAGGGCCCTGGG 1-10-1MOE 1040
389965 69271 69282 CTGCAACATGAT 1-10-1MOE 1018
389965 69417 69428 CTGCAACATGAT 1-10-1MOE 1018
368353 69519 69532 CACTGATCCTGCAC 2-10-2MOE 1007
147080 69630 69641 CTCCTTCCACTG 1-10-1MOE 1021
147081 69631 69642 GCTCCTTCCACT 1-10-1MOE 1006
368353 69665 69678 CACTGATCCTGCAC 2-10-2MOE 1007
398167 69757 69768 CAGGCCATGTGG 1-10-1MOE 1059
398092 69758 69771 AGTCAGGCCATGTG 2-10-2MOE 1060
398093 69811 69824 TCGGACTTTGAAAA 2-10-2MOE 1009
398168 69813 69824 TCGGACTTTGAA 1-10-1MOE 1008
398167 69903 69914 CAGGCCATGTGG 1-10-1MOE 1059
398093 69957 69970 TCGGACTTTGAAAA 2-10-2MOE 1009
398094 70047 70060 ATCAGCCAGACAGA 2-10-2MOE 1010
398095 70065 70078 CATCAGCAAGAGGC 2-10-2MOE 1011
147704 70137 70148 TTGTTCTTAGGA 1-10-1MOE 1012
147728 70450 70461 GCCAGACAGAAG 1-10-1MOE 1013
398164 70464 70475 TTGTCGATCTGC 1-10-1MOE 1014
398096 70562 70575 GGAGAAGCGCAGCT 2-10-2MOE 1015
147735 70564 70575 GGAGAAGCGCAG 1-10-1MOE 1016
147737 70575 70586 ACAGCCAGGTAG 1-10-1MOE 1067
147735 70710 70721 GGAGAAGCGCAG 1-10-1MOE 1016
147737 70721 70732 ACAGCCAGGTAG 1-10-1MOE 1067
404131 70729 70742 ACCTTCGATCACAG 2-10-2MOE 831
368349 70762 70775 CTGCACTGACGAGT 2-10-2MOE 1017
389965 70930 70941 CTGCAACATGAT 1-10-1MOE 1018
368366 70995 71008 CTGATCCTTAGAAG 2-10-2MOE 1019
368354 70999 71012 TCCACTGATCCTGC 2-10-2MOE 1024
368375 71000 71015 CCTTCCACTGATCCTG 3-10-3MOE 1020
368356 71001 71014 CTTCCACTGATCCT 2-10-2MOE 1027
368376 71001 71016 TCCTTCCACTGATCCT 3-10-3MOE 1028
368357 71002 71015 CCTTCCACTGATCC 2-10-2MOE 1046
368377 71002 71017 CTCCTTCCACTGATCC 3-10-3MOE 1030
147077 71003 71014 CTTCCACTGATC 1-10-1MOE 1047
368358 71003 71016 TCCTTCCACTGATC 2-10-2MOE 1031
368378 71003 71018 GCTCCTTCCACTGATC 3-10-3MOE 1032
147078 71004 71015 CCTTCCACTGAT 1-10-1MOE 1044
368359 71005 71018 GCTCCTTCCACTGA 2-10-2MOE 1033
368379 71005 71020 AAGCTCCTTCCACTGA 3-10-3MOE 1034
147080 71006 71017 CTCCTTCCACTG 1-10-1MOE 1021
147082 71008 71019 AGCTCCTTCCAC 1-10-1MOE 1036
401413 71019 71032 TGCAGCCATGTACT 2-10-2MOE 1022
147738 71067 71078 TGGGTGGCCGGG 1-10-1MOE 1069
147739 71071 71082 CGTTTGGGTGGC 1-10-1MOE 1023
147741 71129 71140 CACCCACTGGTG 1-10-1MOE 1055
368354 71145 71158 TCCACTGATCCTGC 2-10-2MOE 1024
368355 71146 71159 TTCCACTGATCCTG 2-10-2MOE 1025
147075 71147 71158 TCCACTGATCCT 1-10-1MOE 1026
368356 71147 71160 CTTCCACTGATCCT 2-10-2MOE 1027
368376 71147 71162 TCCTTCCACTGATCCT 3-10-3MOE 1028
147076 71148 71159 TTCCACTGATCC 1-10-1MOE 1029
368357 71148 71161 CCTTCCACTGATCC 2-10-2MOE 1046
368377 71148 71163 CTCCTTCCACTGATCC 3-10-3MOE 1030
147077 71149 71160 CTTCCACTGATC 1-10-1MOE 1047
368358 71149 71162 TCCTTCCACTGATC 2-10-2MOE 1031
368378 71149 71164 GCTCCTTCCACTGATC 3-10-3MOE 1032
147078 71150 71161 CCTTCCACTGAT 1-10-1MOE 1044
368359 71151 71164 GCTCCTTCCACTGA 2-10-2MOE 1033
368379 71151 71166 AAGCTCCTTCCACTGA 3-10-3MOE 1034
368360 71153 71166 AAGCTCCTTCCACT 2-10-2MOE 1035
147082 71154 71165 AGCTCCTTCCAC 1-10-1MOE 1036
368381 71155 71170 GGGAAAGCTCCTTCCA 3-10-3MOE 1037
390030 71986 71997 TTTATAAAACTG 1-10-1MOE 1074
390030 72132 72143 TTTATAAAACTG 1-10-1MOE 1074
147711 72300 72311 AAGGGCCCTGGG 1-10-1MOE 1040
401414 72347 72360 TTGCAATGTCTGGC 2-10-2MOE 1038
147741 72400 72411 CACCCACTGGTG 1-10-1MOE 1055
401415 72415 72428 GATTTATCTGGCTG 2-10-2MOE 1039
147711 72446 72457 AAGGGCCCTGGG 1-10-1MOE 1040
147742 72575 72586 AACTTCAGTGTC 1-10-1MOE 1041
147743 72690 72701 AGGGCTTCCAGT 1-10-1MOE 1042
147744 72694 72705 AGGAAGGGCTTC 1-10-1MOE 1043
147745 72700 72711 TTGACCAGGAAG 1-10-1MOE 1058
147742 72721 72732 AACTTCAGTGTC 1-10-1MOE 1041
147743 72836 72847 AGGGCTTCCAGT 1-10-1MOE 1042
147744 72840 72851 AGGAAGGGCTTC 1-10-1MOE 1043
368357 72898 72911 CCTTCCACTGATCC 2-10-2MOE 1046
147078 72900 72911 CCTTCCACTGAT 1-10-1MOE 1044
398157 72903 72916 GGAAACATACCCTG 2-10-2MOE 1045
368357 73044 73057 CCTTCCACTGATCC 2-10-2MOE 1046
147077 73045 73056 CTTCCACTGATC 1-10-1MOE 1047
147746 73052 73063 TAAAAACAACAA 1-10-1MOE 1073
147746 73101 73112 TAAAAACAACAA 1-10-1MOE 1073
398160 73139 73152 GAATAGGTTAAGGC 2-10-2MOE 1048
147746 73198 73209 TAAAAACAACAA 1-10-1MOE 1073
398161 73238 73251 AACAATGTGTTGTA 2-10-2MOE 1049
147088 73419 73430 CCCTCTACACCA 1-10-1MOE 1050
404140 73457 73470 GCACACAGCTGAGG 2-10-2MOE 1051
404139 73459 73472 GTGCACACAGCTGA 2-10-2MOE 1052
399301 73461 73474 GTGTGCACACAGCT 2-10-2MOE 1542
404137 73463 73476 CAGTGTGCACACAG 2-10-2MOE 1053
404138 73465 73478 CTCAGTGTGCACAC 2-10-2MOE 1054
147741 73705 73716 CACCCACTGGTG 1-10-1MOE 1055
404135 73858 73871 CATTTCCATGGCCA 2-10-2MOE 1056
398167 74008 74019 CAGGCCATGTGG 1-10-1MOE 1059
398092 74009 74022 AGTCAGGCCATGTG 2-10-2MOE 1060
398162 74114 74127 ACCAAACAGTTCAG 2-10-2MOE 1057
147745 74137 74148 TTGACCAGGAAG 1-10-1MOE 1058
398167 74154 74165 CAGGCCATGTGG 1-10-1MOE 1059
398092 74155 74168 AGTCAGGCCATGTG 2-10-2MOE 1060
389949 74310 74321 GCGCGAGCCCGA 1-10-1MOE 1061
147740 74485 74496 TGTGAGGCTCCA 1-10-1MOE 1062
389950 74527 74538 CCCTGAAGGTTC 1-10-1MOE 1063
398101 74656 74669 TTTGATAAAGCCCT 2-10-2MOE 1064
398104 74805 74818 CAAGAAGACCTTAC 2-10-2MOE 1065
147737 74893 74904 ACAGCCAGGTAG 1-10-1MOE 1067
398105 74894 74907 TGCACAGGCAGGTT 2-10-2MOE 1066
147737 74919 74930 ACAGCCAGGTAG 1-10-1MOE 1067
398106 74974 74987 TGGAAAACTGCACC 2-10-2MOE 1068
404199 75045 75058 GGTCATGCACAGGC 2-10-2MOE 867
404134 75048 75061 TCAGGTCATGCACA 2-10-2MOE 873
398106 75120 75133 TGGAAAACTGCACC 2-10-2MOE 1068
147738 75155 75166 TGGGTGGCCGGG 1-10-1MOE 1069
404132 75227 75240 CCTTGGAATGTCTG 2-10-2MOE 852
147738 75301 75312 TGGGTGGCCGGG 1-10-1MOE 1069
398166 75499 75510 GGGCTTCTTCCA 1-10-1MOE 1070
147746 75617 75628 TAAAAACAACAA 1-10-1MOE 1073
147706 75686 75697 GCTGACATCTCG 1-10-1MOE 1071
398112 75730 75743 CAGCCTGGCACCTA 2-10-2MOE 1072
147746 75763 75774 TAAAAACAACAA 1-10-1MOE 1073
398115 75786 75799 AGTAAATATTGGCT 2-10-2MOE 1076
390030 75839 75850 TTTATAAAACTG 1-10-1MOE 1074
398114 75916 75929 AGGCATATAGCAGA 2-10-2MOE 1075
398115 75932 75945 AGTAAATATTGGCT 2-10-2MOE 1076
404133 75968 75981 TATTCCATGGCCAT 2-10-2MOE 872
147715 77045 77056 GTTGAGCATGAC 1-10-1MOE 1077
147715 77190 77201 GTTGAGCATGAC 1-10-1MOE 1077
147693 77385 77396 GTGCGCTCCCAT 1-10-1MOE 1078
398173 40201 40212 CAGCCTGGGCAC 1-10-1MOE 1543
398173 72764 72775 CA GCCTGGGCA C 1-10-1MOE 1543
399096 1986 1999 TGCTCGAACTCCTT 2-10-2MOE 1544
399102 52822 52835 GAAGTCACTGGCTT 2-10-2MOE 1545
399103 52824 52837 GGGAAGTCACTGGC 2-10-2MOE 1546
399113 59827 59840 GTTAGGCAAAGGGC 2-10-2MOE 1547
399132 69977 69990 GGGCTGAGTGACCC 2-10-2MOE 1548
399173 74592 74605 ATGCTAGTGCACTA 2-10-2MOE 1549
399208 75900 75913 AGCTCGCTACCTCT 2-10-2MOE 1550
399276 27559 27572 GAGGTATCCCATCT 2-10-2MOE 1551
399315 74039 74052 GGCAACTTCAACCT 2-10-2MOE 1552
Table 19: targeting SEQ ID NO:12 and have the short antisense compounds of 1 or 2 mispairing
ISISNO.5 ' target site3 ' target siteSequence (5 '-3 ')The Gapmer die body SeqID NO
398163 20 31 ATGTCAACCGGC 1-10-1MOE 908
384545 23 34 CAAGTAGGATGT 1-10-1MOE 951
147733 26 37 TTCTTGATGTCC 1-10-1MOE 891
147721 59 70 AATGCAGGATCT 1-10-1MOE 1118
147700 110 121 GCGCTAGGCCGC 1-10-1MOE 1110
384545 130 141 CAAGTAGGATGT 1-10-1MOE 951
147705 159 170 CGGTTTTTGTTC 1-10-1MOE 1002
147701 167 178 CCATGGCGGGAC 1-10-1MOE 921
398164 198 209 TTGTCGATCTGC 1-10-1MOE 1014
147730 199 210 CTTGTCCATCAG 1-10-1MOE 1121
147702 226 237 CTGGTAAATAGC 1-10-1MOE 898
147703 245 256 TGGCTTCATGTC 1-10-1MOE 971
147705 266 277 CGGTTTTTGTTC 1-10-1MOE 1002
398165 283 294 GTTCTTAGGAAG 1-10-1MOE 968
147704 285 296 TTGTTCTTAGGA 1-10-1MOE 1012
147705 291 302 CGGTTTTTGTTC 1-10-1MOE 1002
147709 311 322 CCATTTTTATCA 1-10-1MOE 978
147733 349 360 TTCTTGATGTCC 1-10-1MOE 891
147707 360 371 TAGTCATTATCT 1-10-1MOE 977
147708 366 377 TTGATATAGTCA 1-10-1MOE 997
390030 381 392 TTTATAAAACTG 1-10-1MOE 1074
147709 386 397 CCATTTTTATCA 1-10-1MOE 978
147081 393 404 GCTCCTTCCACT 1-10-1MOE 1006
398091 393 406 GGGCTTCTTCCATT 2-10-2MOE 979
398166 395 406 GGGCTTCTTCCA 1-10-1MOE 1070
147712 461 472 ACACCATCTCCC 1-10-1MOE 1005
147713 466 477 CTCCCACACCAT 1-10-1MOE 985
147714 471 482 TTCTGCTCCCAC 1-10-1MOE 986
147710 502 513 TATAGCTCCTCT 1-10-1MOE 994
147736 551 562 AGGTAGGAGAAG 1-10-1MOE 963
147717 574 585 ATCTTCAGAGAT 1-10-1MOE 996
147717 607 618 ATCTTCAGAGAT 1-10-1MOE 996
147710 609 620 TATAGCTCCTCT 1-10-1MOE 994
147708 612 623 TTGATATAGTCA 1-10-1MOE 997
147718 621 632 TAATATGACTTG 1-10-1MOE 998
147746 625 636 TAAAAACAACAA 1-10-1MOE 1073
147736 658 669 AGGTAGGAGAAG 1-10-1MOE 963
147720 676 687 GATCTCTCGAGT 1-10-1MOE 1117
147721 683 694 AATGCAGGATCT 1-10-1MOE 1118
398167 704 715 CAGGCCATGTGG 1-10-1MOE 1059
398092 705 718 AGTCAGGCCATGTG 2-10-2MOE 1060
147722 709 720 AAAGTCAGGCCA 1-10-1MOE 1130
147723 715 726 GACTCCAAAGTC 1-10-1MOE 892
147746 733 744 TAAAAACAACAA 1-10-1MOE 1073
398093 758 771 TCGGACTTTGAAAA 2-10-2MOE 1009
398168 760 771 TCGGACTTTGAA 1-10-1MOE 1008
147725 761 772 CTCGGACTTTGA 1-10-1MOE 1119
147726 766 777 TGACTCTCGGAC 1-10-1MOE 1120
147738 780 791 TGGGTGGCCGGG 1-10-1MOE 1069
147727 807 818 CAGTGGACCACA 1-10-1MOE 1128
147728 846 857 GCCAGACAGAAG 1-10-1MOE 1013
398094 848 861 ATCAGCCAGACAGA 2-10-2MOE 1010
398169 849 860 TCAGCCAGACAG 1-10-1MOE 909
147729 863 874 GTAAGAGGCAGG 1-10-1MOE 920
398095 866 879 CATCAGCAAGAGGC 2-10-2MOE 1011
398164 873 884 TTGTCGATCTGC 1-10-1MOE 1014
147730 874 885 CTTGTCCATCAG 1-10-1MOE 1121
147731 880 891 TTTCCTCTTGTC 1-10-1MOE 934
147732 885 896 GGGTCTTTCCTC 1-10-1MOE 1122
147738 888 899 TGGGTGGCCGGG 1-10-1MOE 1069
147733 906 917 TTCTTGATGTCC 1-10-1MOE 891
398096 971 984 GGAGAAGCGCAGCT 2-10-2MOE 1015
147735 973 984 GGAGAAGCGCAG 1-10-1MOE 1016
147736 978 989 AGGTAGGAGAAG 1-10-1MOE 963
147729 979 990 GTAAGAGGCAGG 1-10-1MOE 920
147737 984 995 ACAGCCAGGTAG 1-10-1MOE 1067
368349 1025 1038 CTGCACTGACGAGT 2-10-2MOE 1017
368369 1025 1040 TCCTGCACTGACGAGT 3-10-3MOE 893
368350 1027 1040 TCCTGCACTGACGA 2-10-2MOE 1079
368370 1027 1042 GATCCTGCACTGACGA 3-10-3MOE 1080
368351 1029 1042 GATCCTGCACTGAC 2-10-2MOE 1081
368371 1029 1044 CTGATCCTGCACTGAC 3-10-3MOE 1082
368352 1031 1044 CTGATCCTGCACTG 2-10-2MOE 1105
368372 1031 1046 CACTGATCCTGCACTG 3-10-3MOE 894
368353 1033 1046 CACTGATCCTGCAC 2-10-2MOE 1007
368373 1033 1048 TCCACTGATCCTGCAC 3-10-3MOE 1083
368354 1035 1048 TCCACTGATCCTGC 2-10-2MOE 1024
368368 1035 1048 TCCACTGATCCTTA 2-10-2MOE 1127
368374 1035 1050 CTTCCACTGATCCTGC 3-10-3MOE 1126
368388 1035 1050 CTTCCACTGATCCTTA 3-10-3MOE 895
147074 1036 1047 CCACTGATCCTG 1-10-1MOE 845
368355 1036 1049 TTCCACTGATCCTG 2-10-2MOE 1025
368375 1036 1051 CCTTCCACTGATCCTG 3-10-3MOE 1020
147075 1037 1048 TCCACTGATCCT 1-10-1MOE 1026
368356 1037 1050 CTTCCACTGATCCT 2-10-2MOE 1027
368376 1037 1052 TCCTTCCACTGATCCT 3-10-3MOE 1028
147076 1038 1049 TTCCACTGATCC 1-10-1MOE 1029
368357 1038 1051 CCTTCCACTGATCC 2-10-2MOE 1046
368377 1038 1053 CTCCTTCCA CTGATCC 3-10-3MOE 1030
147077 1039 1050 CTTCCACTGATC 1-10-1MOE 1047
368358 1039 1052 TCCTTCCACTGATC 2-10-2MOE 1031
368378 1039 1054 GCTCCTTCCACTGATC 3-10-3MOE 1032
147078 1040 1051 CCTTCCACTGAT 1-10-1MOE 1044
147079 1041 1052 TCCTTCCACTGA 1-10-1MOE 1001
368359 1041 1054 GCTCCTTCCACTGA 2-10-2MOE 1033
368379 1041 1056 AAGCTCCTTCCACTGA 3-10-3MOE 1034
147080 1042 1053 CTCCTTCCACTG 1-10-1MOE 1021
147081 1043 1054 GCTCCTTCCACT 1-10-1MOE 1006
368360 1043 1056 AAGCTCCTTCCACT 2-10-2MOE 1035
368380 1043 1058 GAAAGCTCCTTCCACT 3-10-3MOE 896
147082 1044 1055 AGCTCCTTCCAC 1-10-1MOE 1036
368361 1045 1058 GAAAGCTCCTTCCA 2-10-2MOE 962
368381 1045 1060 GGGAAAGCTCCTTCCA 3-10-3MOE 1037
147729 1087 1098 GTAAGAGGCAGG 1-10-1MOE 920
147738 1103 1114 TGGGTGGCCGGG 1-10-1MOE 1069
147739 1107 1118 CGTTTGGGTGGC 1-10-1MOE 1023
147740 1124 1135 TGTGAGGCTCCA 1-10-1MOE 1062
398117 1164 1177 TTTCCACTTGGGTG 2-10-2MOE 960
147741 1165 1176 CACCCACTGGTG 1-10-1MOE 1055
398097 1194 1207 GGCAGTCTTTATCC 2-10-2MOE 897
398098 1272 1285 TAACTTCAGTGTCT 2-10-2MOE 1131
398117 1272 1285 TTTCCACTTGGGTG 2-10-2MOE 960
147742 1273 1284 AACTTCAGTGTC 1-10-1MOE 1041
147698 1293 1304 CCCGCCACCACC 1-10-1MOE 928
147743 1388 1399 AGGGCTTCCAGT 1-10-1MOE 1042
398099 1388 1401 GAAGGGCTTCCAGT 2-10-2MOE 1132
147744 1392 1403 AGGAAGGGCTTC 1-10-1MOE 1043
398100 1395 1408 TGACCAGGAAGGGC 2-10-2MOE 1133
147745 1398 1409 TTGACCAGGAAG 1-10-1MOE 1058
398157 1455 1468 GGAAACATACCCTG 2-10-2MOE 1045
147745 1458 1469 TTGACCAGGAAG 1-10-1MOE 1058
398167 1475 1486 CAGGCCATGTGG 1-10-1MOE 1059
398118 1564 1577 CGCGAGATATCTAA 2-10-2MOE 1084
147697 1575 1586 CCCCAGCAGCGG 1-10-1MOE 1000
147076 1596 1607 TTCCACTGATCC 1-10-1MOE 1029
368357 1596 1609 CCTTCCACTGATCC 2-10-2MOE 1046
147077 1597 1608 CTTCCACTGATC 1-10-1MOE 1047
147078 1598 1609 CCTTCCACTGAT 1-10-1MOE 1044
398118 1672 1685 CGCGAGATATCTAA 2-10-2MOE 1084
398158 1681 1694 AGGCCCTGAGATTA 2-10-2MOE 1134
147697 1683 1694 CCCCAGCAGCGG 1-10-1MOE 1000
398159 1686 1699 GGTTAAGGCCCTGA 2-10-2MOE 1135
398160 1691 1704 GAATAGGTTAAGGC 2-10-2MOE 1048
398163 1711 1722 ATGTCAACCGGC 1-10-1MOE 908
147733 1717 1728 TTCTTGATGTCC 1-10-1MOE 891
147089 1747 1758 TCCCTCTACACC 1-10-1MOE 956
147090 1748 1759 TTCCCTCTACAC 1-10-1MOE 955
147746 1750 1761 TAAAAACAACAA 1-10-1MOE 1073
389949 1777 1788 GCGCGAGCCCGA 1-10-1MOE 1061
398161 1790 1803 AACAATGTGTTGTA 2-10-2MOE 1049
147746 1799 1810 TAAAAACAACAA 1-10-1MOE 1073
147700 1801 1812 GCGCTAGGCCGC 1-10-1MOE 1110
147740 1806 1817 TGTGAGGCTCCA 1-10-1MOE 1062
398163 1819 1830 ATGTCAACCGGC 1-10-1MOE 908
147733 1825 1836 TTCTTGATGTCC 1-10-1MOE 891
389950 1848 1859 CCCTGAAGGTTC 1-10-1MOE 1063
147701 1858 1869 CCATGGCGGGAC 1-10-1MOE 921
398164 1889 1900 TTGTCGATCTGC 1-10-1MOE 1014
147730 1890 1901 CTTGTCCATCAG 1-10-1MOE 1121
147700 1909 1920 GCGCTAGGCCGC 1-10-1MOE 1110
398119 1920 1933 CGCACCTGGTAAAT 2-10-2MOE 1085
147685 1957 1968 GGCTGACATTCA 1-10-1MOE 975
147701 1966 1977 CCATGGCGGGAC 1-10-1MOE 921
398120 1966 1979 GTTCAAGCGGCCTA 2-10-2MOE 1086
398101 1977 1990 TTTGATAAAGCCCT 2-10-2MOE 1064
398164 1997 2008 TTGTCGATCTGC 1-10-1MOE 1014
147730 1998 2009 CTTGTCCATCAG 1-10-1MOE 1121
147702 2025 2036 CTGGTAAATAGC 1-10-1MOE 898
398119 2028 2041 CGCACCTGGTAAAT 2-10-2MOE 1085
398120 2074 2087 GTTCAAGCGGCCTA 2-10-2MOE 1086
398105 2099 2112 TGCACAGGCAGGTT 2-10-2MOE 1066
147736 2204 2215 AGGTAGGAGAAG 1-10-1MOE 963
147741 2257 2268 CACCCACTGGTG 1-10-1MOE 1055
398104 2272 2285 CAAGAAGACCTTAC 2-10-2MOE 1065
147737 2360 2371 ACAGCCAGGTAG 1-10-1MOE 1067
398105 2361 2374 TGCACAGGCAGGTT 2-10-2MOE 1066
147737 2386 2397 ACAGCCAGGTAG 1-10-1MOE 1067
398095 2407 2420 CATCAGCAAGAGGC 2-10-2MOE 1011
398106 2441 2454 TGGAAAACTGCACC 2-10-2MOE 1068
398107 2447 2460 TATTCCTGGAAAAC 2-10-2MOE 902
398121 2474 2487 GTGCCTAGCACAGA 2-10-2MOE 1097
147745 2497 2508 TTGACCAGGAAG 1-10-1MOE 1058
147712 2499 2510 ACACCATCTCCC 1-10-1MOE 1005
398108 2544 2557 GGAATGTCTGAGTT 2-10-2MOE 1136
147691 2575 2586 GAGGTGGGAAAA 1-10-1MOE 966
398121 2582 2595 GTGCCTAGCACAGA 2-10-2MOE 1097
147738 2622 2633 TGGGTGGCCGGG 1-10-1MOE 1069
398162 2666 2679 ACCAAACAGTTCAG 2-10-2MOE 1057
147745 2689 2700 TTGACCAGGAAG 1-10-1MOE 1058
398167 2706 2717 CAGGCCATGTGG 1-10-1MOE 1059
398092 2707 2720 AGTCAGGCCATGTG 2-10-2MOE 1060
398109 2714 2727 CAAGAAGTGTGGTT 2-10-2MOE 903
398110 2852 2865 GTTCCCTTTGCA GG 2-10-2MOE 952
147091 2854 2865 GTTCCCTCTACA 1-10-1MOE 1004
147723 2924 2935 GACTCCAAAGTC 1-10-1MOE 892
398111 2937 2950 GTGAAAATGCTGGC 2-10-2MOE 904
398166 2966 2977 GGGCTTCTTCCA 1-10-1MOE 1070
147089 2978 2989 TCCCTCTACACC 1-10-1MOE 956
147090 2979 2990 TTCCCTCTACAC 1-10-1MOE 955
147706 3007 3018 GCTGACATCTCG 1-10-1MOE 1071
389949 3008 3019 GCGCGAGCCCGA 1-10-1MOE 1061
147723 3032 3043 GACTCCAAAGTC 1-10-1MOE 892
147740 3037 3048 TGTGAGGCTCCA 1-10-1MOE 1062
398112 3051 3064 CAGCCTGGCACCTA 2-10-2MOE 1072
389950 3079 3090 CCCTGAAGGTTC 1-10-1MOE 1063
147746 3084 3095 TAAAAACAACAA 1-10-1MOE 1073
398122 3148 3161 CCCTTTACACAAGT 2-10-2MOE 1087
147089 3151 3162 TCCCTCTACACC 1-10-1MOE 956
147090 3152 3163 TTCCCTCTACAC 1-10-1MOE 955
398113 3160 3173 AGGAGGTTAAACCA 2-10-2MOE 905
147685 3188 3199 GGCTGACATTCA 1-10-1MOE 975
398101 3208 3221 TTTGATAAAGCCCT 2-10-2MOE 1064
398102 3234 3247 CTACCTGAGGATTT 2-10-2MOE 899
398123 3235 3248 CTCAAAATAGATTT 2-10-2MOE 1088
398114 3237 3250 AGGCATATAGCAGA 2-10-2MOE 1075
398103 3241 3254 CCCAGTACTACCTG 2-10-2MOE 900
398115 3253 3266 AGTAAATATTGGCT 2-10-2MOE 1076
398122 3256 3269 CCCTTTACACAAGT 2-10-2MOE 1087
147089 3259 3270 TCCCTCTACACC 1-10-1MOE 956
147090 3260 3271 TTCCCTCTACAC 1-10-1MOE 955
398116 3266 3279 TAATGACCTGATGA 2-10-2MOE 1137
390030 3306 3317 TTTATAAAACTG 1-10-1MOE 1074
398123 3343 3356 CTCAAAATAGATTT 2-10-2MOE 1088
147736 3435 3446 AGGTAGGAGAAG 1-10-1MOE 963
398104 3503 3516 CAAGAAGACCTTAC 2-10-2MOE 1065
147737 3591 3602 ACAGCCAGGTAG 1-10-1MOE 1067
398105 3592 3605 TGCACAGGCAGGTT 2-10-2MOE 1066
147719 3608 3619 CCAACTCCAACT 1-10-1MOE 1116
147737 3617 3628 ACAGCCAGGTAG 1-10-1MOE 1067
401398 3621 3634 CAAAGTCCCTTAGC 2-10-2MOE 947
147079 3637 3648 TCCTTCCACTGA 1-10-1MOE 1001
147080 3638 3649 CTCCTTCCACTG 1-10-1MOE 1021
398095 3638 3651 CATCAGCAAGAGGC 2-10-2MOE 1011
398106 3672 3685 TGGAAAACTGCACC 2-10-2MOE 1068
147733 3687 3698 TTCTTGATGTCC 1-10-1MOE 891
147731 3688 3699 TTTCCTCTTGTC 1-10-1MOE 934
147719 3716 3727 CCAACTCCAACT 1-10-1MOE 1116
147745 3728 3739 TTGACCAGGAAG 1-10-1MOE 1058
147683 3740 3751 GCTTACGATTGT 1-10-1MOE 922
147079 3745 3756 TCCTTCCACTGA 1-10-1MOE 1001
147080 3746 3757 CTCCTTCCACTG 1-10-1MOE 1021
398108 3775 3788 GGAATGTCTGAGTT 2-10-2MOE 1136
147733 3795 3806 TTCTTGATGTCC 1-10-1MOE 891
147731 3796 3807 TTTCCTCTTGTC 1-10-1MOE 934
147691 3806 3817 GAGGTGGGAAAA 1-10-1MOE 966
147738 3853 3864 TGGGTGGCCGGG 1-10-1MOE 1069
398167 3926 3937 CAGGCCATGTGG 1-10-1MOE 1059
147691 3978 3989 GAGGTGGGAAAA 1-10-1MOE 966
398167 4034 4045 CAGGCCATGTGG 1-10-1MOE 1059
147091 4085 4096 GTTCCCTCTACA 1-10-1MOE 1004
147691 4086 4097 GAGGTGGGAAAA 1-10-1MOE 966
398111 4168 4181 GTGAAAATGCTGGC 2-10-2MOE 904
398166 4197 4208 GGGCTTCTTCCA 1-10-1MOE 1070
147091 4223 4234 GTTCCCTCTACA 1-10-1MOE 1004
147092 4224 4235 TGTTCCCTCTAC 1-10-1MOE 901
398112 4282 4295 CAGCCTGGCACCTA 2-10-2MOE 1072
147746 4315 4326 TAAAAACAACAA 1-10-1MOE 1073
398113 4391 4404 AGGAGGTTAAACCA 2-10-2MOE 905
147723 4422 4433 GACTCCAAAGTC 1-10-1MOE 892
398114 4468 4481 AGGCATATAGCAGA 2-10-2MOE 1075
398115 4484 4497 AGTAAATATTGGCT 2-10-2MOE 1076
390030 4491 4502 TTTATAAAACTG 1-10-1MOE 1074
398116 4497 4510 TAATGACCTGATGA 2-10-2MOE 1137
147723 4530 4541 GACTCCAAAGTC 1-10-1MOE 892
390030 4599 4610 TTTATAAAACTG 1-10-1MOE 1074
398124 4761 4774 CACATGAGCTATTC 2-10-2MOE 1089
398124 4869 4882 CACATGAGCTATTC 2-10-2MOE 1089
147703 4926 4937 TGGCTTCATGTC 1-10-1MOE 971
147692 4928 4939 CTCACCTTCATG 1-10-1MOE 1113
147696 4975 4986 TGGATGATTGGC 1-10-1MOE 906
147703 5034 5045 TGGCTTCATGTC 1-10-1MOE 971
147692 5036 5047 CTCACCTTCATG 1-10-1MOE 1113
147098 5173 5184 AGTTGTTGTTCC 1-10-1MOE 1112
398125 5183 5196 CAGTAAGGAATTTT 2-10-2MOE 913
398126 5216 5229 GTGAAGTGAGTCAT 2-10-2MOE 1090
147098 5281 5292 AGTTGTTGTTCC 1-10-1MOE 1112
398127 5283 5296 GGTCACTCAAGATG 2-10-2MOE 1091
398126 5324 5337 GTGAAGTGAGTCAT 2-10-2MOE 1090
398128 5335 5348 CTAAATTTAGTTCA 2-10-2MOE 911
398127 5391 5404 GGTCACTCAAGATG 2-10-2MOE 1091
398128 5443 5456 CTAAATTTAGTTCA 2-10-2MOE 911
147712 5474 5485 ACACCATCTCCC 1-10-1MOE 1005
147736 5600 5611 AGGTAGGAGAAG 1-10-1MOE 963
147746 5606 5617 TAAAAACAACAA 1-10-1MOE 1073
398129 5628 5641 TTTGAGGAGCTATT 2-10-2MOE 1106
147085 5654 5665 TCTACACCAGGT 1-10-1MOE 961
147736 5708 5719 AGGTAGGAGAAG 1-10-1MOE 963
398129 5736 5749 TTTGAGGAGCTATT 2-10-2MOE 1106
147679 5934 5945 CAAAAGGATCCC 1-10-1MOE 907
147723 6229 6240 GACTCCAAAGTC 1-10-1MOE 892
147723 6338 6349 GACTCCAAAGTC 1-10-1MOE 892
390030 6803 6814 TTTATAAAACTG 1-10-1MOE 1074
398142 6885 6898 CCAGCACACTGGAA 2-10-2MOE 923
390030 6912 6923 TTTATAAAACTG 1-10-1MOE 1074
398142 6994 7007 CCAGCACACTGGAA 2-10-2MOE 923
147695 7054 7065 TCATTCCCCACT 1-10-1MOE 984
147695 7163 7174 TCATTCCCCACT 1-10-1MOE 984
398166 7197 7208 GGGCTTCTTCCA 1-10-1MOE 1070
398166 7306 7317 GGGCTTCTTCCA 1-10-1MOE 1070
147684 7442 7453 ACCCAGTCAGGG 1-10-1MOE 964
398130 7694 7707 TTAGTATGACAGCT 2-10-2MOE 925
398131 7711 7724 GGACTCACTCAGCA 2-10-2MOE 1092
398130 7802 7815 TTAGTATGACAGCT 2-10-2MOE 925
398125 7804 7817 CAGTAAGGAATTTT 2-10-2MOE 913
398131 7819 7832 GGACTCACTCAGCA 2-10-2MOE 1092
390030 7877 7888 TTTATAAAACTG 1-10-1MOE 1074
398125 7912 7925 CAGTAAGGAATTTT 2-10-2MOE 913
390030 7985 7996 TTTATAAAACTG 1-10-1MOE 1074
398132 8031 8044 TCAGGGCTACTCAT 2-10-2MOE 1093
398132 8139 8152 TCAGGGCTACTCAT 2-10-2MOE 1093
147684 8148 8159 ACCCAGTCAGGG 1-10-1MOE 964
147684 8256 8267 ACCCAGTCAGGG 1-10-1MOE 964
398163 8365 8376 ATGTCAACCGGC 1-10-1MOE 908
398166 8447 8458 GGGCTTCTTCCA 1-10-1MOE 1070
398163 8473 8484 ATGTCAACCGGC 1-10-1MOE 908
398166 8555 8566 GGGCTTCTTCCA 1-10-1MOE 1070
147718 8631 8642 TAATATGACTTG 1-10-1MOE 998
147691 8698 8709 GAGGTGGGAAAA 1-10-1MOE 966
147691 8806 8817 GAGGTGGGAAAA 1-10-1MOE 966
147728 8835 8846 GCCAGACAGAAG 1-10-1MOE 1013
147727 8876 8887 CAGTGGACCACA 1-10-1MOE 1128
147728 8943 8954 GCCAGACAGAAG 1-10-1MOE 1013
398169 8946 8957 TCAGCCAGACAG 1-10-1MOE 909
147727 8984 8995 CAGTGGACCACA 1-10-1MOE 1128
147742 9060 9071 AACTTCAGTGTC 1-10-1MOE 1041
398133 9112 9125 CAGCACTAGATTCA 2-10-2MOE 1094
384545 9135 9146 CAAGTAGGATGT 1-10-1MOE 951
147742 9168 9179 AACTTCAGTGTC 1-10-1MOE 1041
398133 9220 9233 CAGCACTAGATTCA 2-10-2MOE 1094
384545 9243 9254 CAAGTAGGATGT 1-10-1MOE 951
398125 9368 9381 CAGTAAGGAATTTT 2-10-2MOE 913
398125 9476 9489 CAGTAAGGAATTTT 2-10-2MOE 913
401409 9516 9529 ATTCTTAACACAGA 2-10-2MOE 991
147096 9594 9605 TTGTTGTTCCCT 1-10-1MOE 1107
147733 9597 9608 TTCTTGATGTCC 1-10-1MOE 891
147720 9689 9700 GATCTCTCGAGT 1-10-1MOE 1117
147096 9702 9713 TTGTTGTTCCCT 1-10-1MOE 1107
147733 9705 9716 TTCTTGATGTCC 1-10-1MOE 891
147720 9797 9808 GATCTCTCGAGT 1-10-1MOE 1117
147746 9963 9974 TAAAAACAACAA 1-10-1MOE 1073
147746 9966 9977 TAAAAACAACAA 1-10-1MOE 1073
147746 9969 9980 TAAAAACAACAA 1-10-1MOE 1073
147746 9991 10002 TAAAAACAACAA 1-10-1MOE 1073
147746 10071 10082 TAAAAACAACAA 1-10-1MOE 1073
147746 10074 10085 TAAAAACAACAA 1-10-1MOE 1073
147746 10077 10088 TAAAAACAACAA 1-10-1MOE 1073
147746 10099 10110 TAAAAACAACAA 1-10-1MOE 1073
398134 10153 10166 TAGCTTAATGTAAC 2-10-2MOE 1095
147085 10221 10232 TCTACACCAGGT 1-10-1MOE 961
398134 10261 10274 TAGCTTAATGTAAC 2-10-2MOE 1095
390030 10278 10289 TTTATAAAACTG 1-10-1MOE 1074
147084 10328 10339 CTACACCAGGTC 1-10-1MOE 993
147711 10684 10695 AAGGGCCCTGGG 1-10-1MOE 1040
398128 11333 11346 CTAAATTTAGTTCA 2-10-2MOE 911
398128 11340 11353 CTAAATTTAGTTCA 2-10-2MOE 911
147730 11783 11794 CTTGTCCATCAG 1-10-1MOE 1121
147731 11789 11800 TTTCCTCTTGTC 1-10-1MOE 934
147730 11790 11801 CTTGTCCATCAG 1-10-1MOE 1121
147731 11796 11807 TTTCCTCTTGTC 1-10-1MOE 934
147707 11960 11971 TAGTCATTATCT 1-10-1MOE 977
147090 12008 12019 TTCCCTCTACAC 1-10-1MOE 955
147091 12009 12020 GTTCCCTCTACA 1-10-1MOE 1004
147091 12014 12025 GTTCCCTCTACA 1-10-1MOE 1004
398096 12141 12154 GGAGAAGCGCAGCT 2-10-2MOE 1015
147735 12143 12154 GGAGAAGCGCAG 1-10-1MOE 1016
398096 12146 12159 GGAGAAGCGCAGCT 2-10-2MOE 1015
147735 12148 12159 GGAGAAGCGCAG 1-10-1MOE 1016
398166 12209 12220 GGGCTTCTTCCA 1-10-1MOE 1070
398166 12214 12225 GGGCTTCTTCCA 1-10-1MOE 1070
398135 12303 12316 GACTACATTTTACA 2-10-2MOE 912
147741 12389 12400 CACCCACTGGTG 1-10-1MOE 1055
147741 12394 12405 CACCCACTGGTG 1-10-1MOE 1055
398125 12431 12444 CAGTAAGGAATTTT 2-10-2MOE 913
147714 12585 12596 TTCTGCTCCCAC 1-10-1MOE 986
147718 12594 12605 TAATATGACTTG 1-10-1MOE 998
398125 12612 12625 CAGTAAGGAATTTT 2-10-2MOE 913
147737 12803 12814 ACAGCCAGGTAG 1-10-1MOE 1067
147746 12876 12887 TAAAAACAACAA 1-10-1MOE 1073
147691 12900 12911 GAGGTGGGAAAA 1-10-1MOE 966
398136 12915 12928 TTGTGACATCTAGG 2-10-2MOE 1096
147737 12984 12995 ACAGCCAGGTAG 1-10-1MOE 1067
147746 13057 13068 TAAAAACAACAA 1-10-1MOE 1073
147691 13081 13092 GAGGTGGGAAAA 1-10-1MOE 966
398136 13096 13109 TTGTGACATCTAGG 2-10-2MOE 1096
398138 13254 13267 AACATCAAGCTTGA 2-10-2MOE 931
398138 13435 13448 AACATCAAGCTTGA 2-10-2MOE 931
147691 13488 13499 GAGGTGGGAAAA 1-10-1MOE 966
147681 13659 13670 ATGTCATTAAAC 1-10-1MOE 965
147691 13669 13680 GAGGTGGGAAAA 1-10-1MOE 966
389965 13839 13850 CTGCAACATGAT 1-10-1MOE 1018
389764 13839 13850 CTGCAACATGAT 1-9-2MOE 1018
147681 13840 13851 ATGTCATTAAAC 1-10-1MOE 965
389965 14020 14031 CTGCAACATGAT 1-10-1MOE 1018
389764 14020 14031 CTGCAACATGAT 1-9-2MOE 1018
389948 14067 14078 CCGTTGGACCCC 1-10-1MOE 915
147736 14123 14134 AGGTAGGAGAAG 1-10-1MOE 963
389948 14248 14259 CCGTTGGACCCC 1-10-1MOE 915
147738 14279 14290 TGGGTGGCCGGG 1-10-1MOE 1069
147736 14304 14315 AGGTAGGAGAAG 1-10-1MOE 963
147731 14411 14422 TTTCCTCTTGTC 1-10-1MOE 934
147738 14461 14472 TGGGTGGCCGGG 1-10-1MOE 1069
147692 14475 14486 CTCACCTTCATG 1-10-1MOE 1113
147731 14593 14604 TTTCCTCTTGTC 1-10-1MOE 934
389950 14614 14625 CCCTGAAGGTTC 1-10-1MOE 1063
147692 14657 14668 CTCACCTTCATG 1-10-1MOE 1113
147717 14750 14761 ATCTTCAGAGAT 1-10-1MOE 996
147698 14754 14765 CCCGCCACCACC 1-10-1MOE 928
389950 14796 14807 CCCTGAAGGTTC 1-10-1MOE 1063
398112 14863 14876 CAGCCTGGCACCTA 2-10-2MOE 1072
398121 14875 14888 GTGCCTAGCACAGA 2-10-2MOE 1097
147717 14932 14943 ATCTTCAGAGAT 1-10-1MOE 996
398112 15045 15058 CAGCCTGGCACCTA 2-10-2MOE 1072
398121 15057 15070 GTGCCTAGCACAGA 2-10-2MOE 1097
147730 15117 15128 CTTGTCCATCAG 1-10-1MOE 1121
147730 15299 15310 CTTGTCCATCAG 1-10-1MOE 1121
401407 15339 15352 CAGCTTAGGCAGAG 2-10-2MOE 983
398167 15556 15567 CAGGCCATGTGG 1-10-1MOE 1059
147736 16444 16455 AGGTAGGAGAAG 1-10-1MOE 963
147746 16510 16521 TAAAAACAACAA 1-10-1MOE 1073
147738 16590 16601 TGGGTGGCCGGG 1-10-1MOE 1069
147736 16610 16621 AGGTAGGAGAAG 1-10-1MOE 963
398167 16631 16642 CAGGCCATGTGG 1-10-1MOE 1059
401411 16657 16670 AGCCGCCTGAAGTG 2-10-2MOE 999
147746 16676 16687 TAAAAACAACAA 1-10-1MOE 1073
398144 16745 16758 GACAGCTTCTATAA 2-10-2MOE 916
147738 16756 16767 TGGGTGGCCGGG 1-10-1MOE 1069
398167 16797 16808 CAGGCCATGTGG 1-10-1MOE 1059
398144 16911 16924 GACAGCTTCTATAA 2-10-2MOE 916
389965 17096 17107 CTGCAACATGAT 1-10-1MOE 1018
389764 17096 17107 CTGCAACATGAT 1-9-2MOE 1018
389965 17264 17275 CTGCAACATGAT 1-10-1MOE 1018
389764 17264 17275 CTGCAACATGAT 1-9-2MOE 1018
147709 17406 17417 CCATTTTTATCA 1-10-1MOE 978
147745 17443 17454 TTGACCAGGAAG 1-10-1MOE 1058
147746 17497 17508 TAAAAACAACAA 1-10-1MOE 1073
147720 17589 17600 GATCTCTCGAGT 1-10-1MOE 1117
147745 17611 17622 TTGACCAGGAAG 1-10-1MOE 1058
147695 17634 17645 TCATTCCCCACT 1-10-1MOE 984
147746 17665 17676 TAAAAACAACAA 1-10-1MOE 1073
147088 17707 17718 CCCTCTACACCA 1-10-1MOE 1050
147720 17757 17768 GATCTCTCGAGT 1-10-1MOE 1117
147711 17808 17819 AAGGGCCCTGGG 1-10-1MOE 1040
147711 17976 17987 AAGGGCCCTGGG 1-10-1MOE 1040
398139 18049 18062 AGTGACTGACCACA 2-10-2MOE 917
398139 18217 18230 AGTGACTGACCACA 2-10-2MOE 917
398140 18596 18609 GTAGCATAGAGCCT 2-10-2MOE 918
398140 18764 18777 GTAGCATAGAGCCT 2-10-2MOE 918
398167 18927 18938 CAGGCCATGTGG 1-10-1MOE 1059
398167 19095 19106 CAGGCCATGTGG 1-10-1MOE 1059
147724 19147 19158 GAAATTGAGGAA 1-10-1MOE 1139
147746 19207 19218 TAAAAACAACAA 1-10-1MOE 1073
147724 19315 19326 GAAATTGAGGAA 1-10-1MOE 1139
147740 19348 19359 TGTGAGGCTCCA 1-10-1MOE 1062
147746 19375 19386 TAAAAACAACAA 1-10-1MOE 1073
147729 19386 19397 GTAAGAGGCAGG 1-10-1MOE 920
147701 19503 19514 CCATGGCGGGAC 1-10-1MOE 921
147711 19508 19519 AAGGGCCCTGGG 1-10-1MOE 1040
147740 19516 19527 TGTGAGGCTCCA 1-10-1MOE 1062
147718 19617 19628 TAATATGACTTG 1-10-1MOE 998
390030 19618 19629 TTTATAAAACTG 1-10-1MOE 1074
147679 19635 19646 CAAAAGGATCCC 1-10-1MOE 907
147711 19676 19687 AAGGGCCCTGGG 1-10-1MOE 1040
147694 19747 19758 CAGCCTACCAGT 1-10-1MOE 1098
147718 19785 19796 TAATATGACTTG 1-10-1MOE 998
390030 19786 19797 TTTATAAAACTG 1-10-1MOE 1074
147679 19803 19814 CAAAAGGATCCC 1-10-1MOE 907
147698 19852 19863 CCCGCCACCACC 1-10-1MOE 928
147694 19915 19926 CAGCCTACCAGT 1-10-1MOE 1098
147704 20011 20022 TTGTTCTTAGGA 1-10-1MOE 1012
147698 20020 20031 CCCGCCACCACC 1-10-1MOE 928
398142 20485 20498 CCAGCACACTGGAA 2-10-2MOE 923
147078 20514 20525 CCTTCCACTGAT 1-10-1MOE 1044
147079 20515 20526 TCCTTCCACTGA 1-10-1MOE 1001
147080 20516 20527 CTCCTTCCACTG 1-10-1MOE 1021
398143 20561 20574 GTCAGTCCCAGCTA 2-10-2MOE 924
389965 20620 20631 CTGCAACATGAT 1-10-1MOE 1018
389764 20620 20631 CTGCAACATGAT 1-9-2MOE 1018
398142 20653 20666 CCAGCACACTGGAA 2-10-2MOE 923
147078 20682 20693 CCTTCCACTGAT 1-10-1MOE 1044
147079 20683 20694 TCCTTCCACTGA 1-10-1MOE 1001
147080 20684 20695 CTCCTTCCACTG 1-10-1MOE 1021
147080 20704 20715 CTCCTTCCACTG 1-10-1MOE 1021
147081 20705 20716 GCTCCTTCCACT 1-10-1MOE 1006
398143 20729 20742 GTCAGTCCCAGCTA 2-10-2MOE 924
389965 20788 20799 CTGCAACATGAT 1-10-1MOE 1018
389764 20788 20799 CTGCAACATGAT 1-9-2MOE 1018
147746 20870 20881 TAAAAACAACAA 1-10-1MOE 1073
147080 20872 20883 CTCCTTCCACTG 1-10-1MOE 1021
147081 20873 20884 GCTCCTTCCACT 1-10-1MOE 1006
147746 21038 21049 TAAAAACAACAA 1-10-1MOE 1073
147717 21080 21091 ATCTTCAGAGAT 1-10-1MOE 996
147076 21222 21233 TTCCACTGATCC 1-10-1MOE 1029
147076 21390 21401 TTCCACTGATCC 1-10-1MOE 1029
398094 21441 21454 ATCAGCCAGACAGA 2-10-2MOE 1010
147746 21465 21476 TAAAAACAACAA 1-10-1MOE 1073
398094 21609 21622 ATCAGCCAGACAGA 2-10-2MOE 1010
398169 21610 21621 TCAGCCAGACAG 1-10-1MOE 909
147746 21633 21644 TAAAAACAACAA 1-10-1MOE 1073
147738 21884 21895 TGGGTGGCCGGG 1-10-1MOE 1069
147743 22045 22056 AGGGCTTCCAGT 1-10-1MOE 1042
147738 22052 22063 TGGGTGGCCGGG 1-10-1MOE 1069
147683 22107 22118 GCTTACGATTGT 1-10-1MOE 922
147743 22213 22224 AGGGCTTCCAGT 1-10-1MOE 1042
147681 22566 22577 ATGTCATTAAAC 1-10-1MOE 965
389950 22619 22630 CCCTGAAGGTTC 1-10-1MOE 1063
147681 22734 22745 ATGTCATTAAA C 1-10-1MOE 965
147736 22759 22770 AGGTAGGAGAAG 1-10-1MOE 963
389950 22787 22798 CCCTGAAGGTTC 1-10-1MOE 1063
389949 22794 22805 GCGCGAGCCCGA 1-10-1MOE 1061
147736 22927 22938 AGGTAGGAGAAG 1-10-1MOE 963
389949 22962 22973 GCGCGAGCCCGA 1-10-1MOE 1061
398144 22962 22975 GACAGCTTCTATAA 2-10-2MOE 916
398142 23008 23021 CCAGCACACTGGAA 2-10-2MOE 923
147727 23019 23030 CAGTGGACCACA 1-10-1MOE 1128
398169 23064 23075 TCAGCCAGACAG 1-10-1MOE 909
398144 23130 23143 GACAGCTTCTATAA 2-10-2MOE 916
398145 23154 23167 ACATGTCAGTAATT 2-10-2MOE 1099
398142 23176 23189 CCAGCACACTGGAA 2-10-2MOE 923
147727 23187 23198 CAGTGGACCACA 1-10-1MOE 1128
147735 23243 23254 GGAGAAGCGCAG 1-10-1MOE 1016
398145 23322 23335 ACATGTCAGTAATT 2-10-2MOE 1099
147735 23411 23422 GGAGAAGCGCAG 1-10-1MOE 1016
398146 23478 23491 CTCATGGACACAAA 2-10-2MOE 1100
398146 23646 23659 CTCATGGACACAAA 2-10-2MOE 1100
398147 23784 23797 CTACAGGACAATAC 2-10-2MOE 957
398114 23853 23866 AGGCATATAGCAGA 2-10-2MOE 1075
398147 23952 23965 CTACAGGACAATAC 2-10-2MOE 957
398114 24021 24034 AGGCATATAGCAGA 2-10-2MOE 1075
147702 24319 24330 CTGGTAAATAGC 1-10-1MOE 898
147702 24487 24498 CTGGTAAATAGC 1-10-1MOE 898
389965 24543 24554 CTGCAACATGAT 1-10-1MOE 1018
389764 24543 24554 CTGCAACATGAT 1-9-2MOE 1018
147713 24602 24613 CTCCCACACCAT 1-10-1MOE 985
389965 24711 24722 CTGCAACATGAT 1-10-1MOE 1018
389764 24711 24722 CTGCAACATGAT 1-9-2MOE 1018
147684 24918 24929 ACCCAGTCAGGG 1-10-1MOE 964
147684 25086 25097 ACCCAGTCAGGG 1-10-1MOE 964
398148 25152 25165 TCATAACTATTAAG 2-10-2MOE 981
398144 25192 25205 GACAGCTTCTATAA 2-10-2MOE 916
147746 25216 25227 TAAAAACAACAA 1-10-1MOE 1073
147736 25313 25324 AGGTAGGAGAAG 1-10-1MOE 963
398148 25320 25333 TCATAACTATTAAG 2-10-2MOE 981
398143 25337 25350 GTCAGTCCCAGCTA 2-10-2MOE 924
398144 25360 25373 GACAGCTTCTATAA 2-10-2MOE 916
147746 25384 25395 TAAAAACAACAA 1-10-1MOE 1073
147691 25442 25453 GAGGTGGGAAAA 1-10-1MOE 966
147736 25481 25492 AGGTAGGAGAAG 1-10-1MOE 963
398130 25504 25517 TTAGTATGACAGCT 2-10-2MOE 925
147691 25610 25621 GAGGTGGGAAAA 1-10-1MOE 966
147721 25662 25673 AATGCAGGATCT 1-10-1MOE 1118
398130 25672 25685 TTAGTATGACAGCT 2-10-2MOE 925
147688 25750 25761 TCCCAAACAAAT 1-10-1MOE 990
147746 25810 25821 TAAAAACAACAA 1-10-1MOE 1073
147721 25830 25841 AATGCAGGATCT 1-10-1MOE 1118
147688 25918 25929 TCCCAAACAAAT 1-10-1MOE 990
147746 25978 25989 TAAAAACAACAA 1-10-1MOE 1073
147746 26172 26183 TAAAAACAACAA 1-10-1MOE 1073
147746 26340 26351 TAAAAACAACAA 1-10-1MOE 1073
398149 26492 26505 GGAAGTTTTCAAGT 2-10-2MOE 1101
398150 26526 26539 GAATCTGGAGGTAA 2-10-2MOE 1102
398149 26641 26654 GGAAGTTTTCAAGT 2-10-2MOE 1101
398150 26675 26688 GAATCTGGAGGTAA 2-10-2MOE 1102
147729 26712 26723 GTAAGAGGCAGG 1-10-1MOE 920
398151 26718 26731 TCAGTGTAGGAAGA 2-10-2MOE 926
147729 26861 26872 GTAAGAGGCAGG 1-10-1MOE 920
398151 26867 26880 TCAGTGTAGGAAGA 2-10-2MOE 926
147728 26917 26928 GCCAGACAGAAG 1-10-1MOE 1013
147728 27066 27077 GCCAGACAGAAG 1-10-1MOE 1013
147076 27258 27269 TTCCACTGATCC 1-10-1MOE 1029
147731 27267 27278 TTTCCTCTTGTC 1-10-1MOE 934
147076 27407 27418 TTCCACTGATCC 1-10-1MOE 1029
147731 27416 27427 TTTCCTCTTGTC 1-10-1MOE 934
398152 27559 27572 TGAATATACAGATG 2-10-2MOE 927
398152 27708 27721 TGAATATACAGATG 2-10-2MOE 927
147696 28265 28276 TGGATGATTGGC 1-10-1MOE 906
147696 28414 28425 TGGATGATTGGC 1-10-1MOE 906
147698 28481 28492 CCCGCCACCACC 1-10-1MOE 928
147720 28662 28673 GATCTCTCGAGT 1-10-1MOE 1117
389965 28714 28725 CTGCAACATGAT 1-10-1MOE 1018
389764 28714 28725 CTGCAACATGAT 1-9-2MOE 1018
389965 28861 28872 CTGCAACATGAT 1-10-1MOE 1018
389764 28861 28872 CTGCAACATGAT 1-9-2MOE 1018
398153 28980 28993 ATTTCTCTTACAGG 2-10-2MOE 948
398153 29126 29139 ATTTCTCTTACAGG 2-10-2MOE 948
147719 29570 29581 CCAACTCCAACT 1-10-1MOE 1116
398154 29692 29705 AGCCCCTTGGCCGT 2-10-2MOE 1103
147719 29715 29726 CCAACTCCAACT 1-10-1MOE 1116
398155 29785 29798 TGTTTTTACACAGA 2-10-2MOE 970
398154 29837 29850 A GCCCCTTGGCCGT 2-10-2MOE 1103
401384 29905 29918 TGAACACATCACTA 2-10-2MOE 933
398155 29930 29943 TGTTTTTACACAGA 2-10-2MOE 970
390030 29945 29956 TTTATAAAACTG 1-10-1MOE 1074
390030 30090 30101 TTTATAAAACTG 1-10-1MOE 1074
398156 30141 30154 GAATACTTCAAATC 2-10-2MOE 1104
398156 30286 30299 GAATACTTCAAATC 2-10-2MOE 1104
389948 30384 30395 CCGTTGGACCCC 1-10-1MOE 915
389948 30530 30541 CCGTTGGACCCC 1-10-1MOE 915
398142 30591 30604 CCAGCACACTGGAA 2-10-2MOE 923
147744 30654 30665 AGGAAGGGCTTC 1-10-1MOE 1043
147093 30689 30700 TTGTTCCCTCTA 1-10-1MOE 929
398142 30738 30751 CCAGCACACTGGAA 2-10-2MOE 923
147744 30801 30812 AGGAAGGGCTTC 1-10-1MOE 1043
398168 31082 31093 TCGGACTTTGAA 1-10-1MOE 1008
147746 31105 31116 TAAAAACAACAA 1-10-1MOE 1073
398168 31230 31241 TCGGACTTTGAA 1-10-1MOE 1008
390030 31329 31340 TTTATAAAACTG 1-10-1MOE 1074
147736 31458 31469 AGGTAGGAGAAG 1-10-1MOE 963
390030 31477 31488 TTTATAAAACTG 1-10-1MOE 1074
147736 31606 31617 AGGTAGGAGAAG 1-10-1MOE 963
147698 31713 31724 CCCGCCACCACC 1-10-1MOE 928
384545 31829 31840 CAAGTAGGATGT 1-10-1MOE 951
147698 31861 31872 CCCGCCACCACC 1-10-1MOE 928
147723 31941 31952 GACTCCAAAGTC 1-10-1MOE 892
384545 31977 31988 CAAGTAGGATGT 1-10-1MOE 951
147692 32061 32072 CTCACCTTCATG 1-10-1MOE 1113
147723 32089 32100 GACTCCAAAGTC 1-10-1MOE 892
147692 32209 32220 CTCACCTTCATG 1-10-1MOE 1113
147089 32535 32546 TCCCTCTACACC 1-10-1MOE 956
401396 32569 32582 TGCAGGATGTTGAG 2-10-2MOE 945
147730 32714 32725 CTTGTCCATCAG 1-10-1MOE 1121
398165 32854 32865 GTTCTTAGGAAG 1-10-1MOE 968
147730 32862 32873 CTTGTCCATCAG 1-10-1MOE 1121
389950 32949 32960 CCCTGAAGGTTC 1-10-1MOE 1063
398165 33002 33013 GTTCTTAGGAAG 1-10-1MOE 968
147736 33012 33023 AGGTAGGAGAAG 1-10-1MOE 963
368352 33056 33069 CTGATCCTGCACTG 2-10-2MOE 1105
147081 33073 33084 GCTCCTTCCACT 1-10-1MOE 1006
368360 33073 33086 AAGCTCCTTCCACT 2-10-2MOE 1035
147082 33074 33085 AGCTCCTTCCA C 1-10-1MOE 1036
389950 33097 33108 CCCTGAAGGTTC 1-10-1MOE 1063
147736 33160 33171 AGGTAGGAGAAG 1-10-1MOE 963
368352 33204 33217 CTGATCCTGCACTG 2-10-2MOE 1105
147081 33221 33232 GCTCCTTCCACT 1-10-1MOE 1006
147082 33222 33233 AGCTCCTTCCAC 1-10-1MOE 1036
398138 33244 33257 AACATCAAGCTTGA 2-10-2MOE 931
147746 33250 33261 TAAAAACAACAA 1-10-1MOE 1073
398138 33392 33405 AACATCAAGCTTGA 2-10-2MOE 931
147746 33398 33409 TAAAAACAACAA 1-10-1MOE 1073
147732 33652 33663 GGGTCTTTCCTC 1-10-1MOE 1122
147724 33733 33744 GAAATTGAGGAA 1-10-1MOE 1139
147732 33800 33811 GGGTCTTTCCTC 1-10-1MOE 1122
147724 33881 33892 GAAATTGAGGAA 1-10-1MOE 1139
147719 33976 33987 CCAACTCCAACT 1-10-1MOE 1116
147746 34034 34045 TAAAAACAACAA 1-10-1MOE 1073
398129 34045 34058 TTTGAGGAGCTATT 2-10-2MOE 1106
147719 34124 34135 CCAACTCCAACT 1-10-1MOE 1116
147721 34156 34167 AATGCAGGATCT 1-10-1MOE 1118
398129 34193 34206 TTTGAGGAGCTATT 2-10-2MOE 1106
147721 34304 34315 AATGCAGGATCT 1-10-1MOE 1118
147746 34606 34617 TAAAAACAACAA 1-10-1MOE 1073
398165 34704 34715 GTTCTTAGGAAG 1-10-1MOE 968
147746 34754 34765 TAAAAACAACAA 1-10-1MOE 1073
398165 34852 34863 GTTCTTAGGAAG 1-10-1MOE 968
147717 34893 34904 ATCTTCAGAGAT 1-10-1MOE 996
147719 34976 34987 CCAACTCCAACT 1-10-1MOE 1116
147092 34987 34998 TGTTCCCTCTAC 1-10-1MOE 901
147719 35124 35135 CCAACTCCAACT 1-10-1MOE 1116
147092 35135 35146 TGTTCCCTCTAC 1-10-1MOE 901
147736 35248 35259 AGGTAGGAGAAG 1-10-1MOE 963
147738 35391 35402 TGGGTGGCCGGG 1-10-1MOE 1069
147736 35396 35407 AGGTAGGAGAAG 1-10-1MOE 963
147738 35539 35550 TGGGTGGCCGGG 1-10-1MOE 1069
147691 35554 35565 GAGGTGGGAAAA 1-10-1MOE 966
147691 35702 35713 GAGGTGGGAAAA 1-10-1MOE 966
147746 35814 35825 TAAAAACAACAA 1-10-1MOE 1073
147733 35889 35900 TTCTTGATGTCC 1-10-1MOE 891
147733 35923 35934 TTCTTGATGTCC 1-10-1MOE 891
147746 35962 35973 TAAAAACAACAA 1-10-1MOE 1073
147726 35978 35989 TGACTCTCGGAC 1-10-1MOE 1120
147733 36037 36048 TTCTTGATGTCC 1-10-1MOE 891
147733 36071 36082 TTCTTGATGTCC 1-10-1MOE 891
147726 36126 36137 TGACTCTCGGAC 1-10-1MOE 1120
147736 36359 36370 AGGTAGGAGAAG 1-10-1MOE 963
147691 36360 36371 GAGGTGGGAAAA 1-10-1MOE 966
147736 36507 36518 AGGTAGGAGAAG 1-10-1MOE 963
147691 36508 36519 GAGGTGGGAAAA 1-10-1MOE 966
147746 36564 36575 TAAAAACAACAA 1-10-1MOE 1073
147723 36575 36586 GACTCCAAAGTC 1-10-1MOE 892
147731 36620 36631 TTTCCTCTTGTC 1-10-1MOE 934
147723 36723 36734 GACTCCAAAGTC 1-10-1MOE 892
147731 36768 36779 TTTCCTCTTGTC 1-10-1MOE 934
398169 37174 37185 TCAGCCAGACAG 1-10-1MOE 909
147688 37380 37391 TCCCAAACAAAT 1-10-1MOE 990
147688 37528 37539 TCCCAAACAAAT 1-10-1MOE 990
147714 37881 37892 TTCTGCTCCCAC 1-10-1MOE 986
147714 38029 38040 TTCTGCTCCCAC 1-10-1MOE 986
147681 38364 38375 ATGTCATTAAAC 1-10-1MOE 965
147736 38766 38777 AGGTAGGAGAAG 1-10-1MOE 963
147738 38909 38920 TGGGTGGCCGGG 1-10-1MOE 1069
147736 38914 38925 AGGTAGGAGAAG 1-10-1MOE 963
147738 39057 39068 TGGGTGGCCGGG 1-10-1MOE 1069
390030 39249 39260 TTTATAAAACTG 1-10-1MOE 1074
390030 39397 39408 TTTATAAAACTG 1-10-1MOE 1074
147717 39545 39556 ATCTTCAGAGAT 1-10-1MOE 996
147717 39693 39704 ATCTTCAGAGAT 1-10-1MOE 996
147746 39729 39740 TAAAAACAACAA 1-10-1MOE 1073
147746 39789 39800 TAAAAACAACAA 1-10-1MOE 1073
147691 39829 39840 GAGGTGGGAAAA 1-10-1MOE 966
147746 39877 39888 TAAAAACAACAA 1-10-1MOE 1073
147691 39977 39988 GAGGTGGGAAAA 1-10-1MOE 966
147727 39983 39994 CAGTGGACCACA 1-10-1MOE 1128
147727 40131 40142 CAGTGGACCACA 1-10-1MOE 1128
147746 40333 40344 TAAAAACAACAA 1-10-1MOE 1073
147719 40457 40468 CCAACTCCAACT 1-10-1MOE 1116
147679 40467 40478 CAAAAGGATCCC 1-10-1MOE 907
147746 40478 40489 TAAAAACAACAA 1-10-1MOE 1073
147741 40565 40576 CACCCACTGGTG 1-10-1MOE 1055
398166 40589 40600 GGGCTTCTTCCA 1-10-1MOE 1070
147719 40605 40616 CCAACTCCAACT 1-10-1MOE 1116
147679 40615 40626 CAAAAGGATCCC 1-10-1MOE 907
147746 40626 40637 TAAAAACAACAA 1-10-1MOE 1073
147735 40662 40673 GGAGAAGCGCAG 1-10-1MOE 1016
147746 40706 40717 TAAAAACAACAA 1-10-1MOE 1073
147741 40713 40724 CACCCACTGGTG 1-10-1MOE 1055
398166 40737 40748 GGGCTTCTTCCA 1-10-1MOE 1070
147735 40810 40821 GGAGAAGCGCAG 1-10-1MOE 1016
147746 40854 40865 TAAAAACAACAA 1-10-1MOE 1073
147718 41218 41229 TAATATGACTTG 1-10-1MOE 998
147717 41221 41232 ATCTTCAGAGAT 1-10-1MOE 996
147717 41369 41380 ATCTTCAGAGAT 1-10-1MOE 996
147723 41627 41638 GACTCCAAAGTC 1-10-1MOE 892
147717 41747 41758 ATCTTCAGAGAT 1-10-1MOE 996
147723 41775 41786 GACTCCAAAGTC 1-10-1MOE 892
390030 41908 41919 TTTATAAAACTG 1-10-1MOE 1074
390030 42056 42067 TTTATAAAACTG 1-10-1MOE 1074
398153 42157 42170 ATTTCTCTTACAGG 2-10-2MOE 948
398153 42305 42318 ATTTCTCTTACAGG 2-10-2MOE 948
147690 42423 42434 TGAAGTTAATTC 1-10-1MOE 1138
147695 42521 42532 TCATTCCCCACT 1-10-1MOE 984
147710 42543 42554 TATAGCTCCTCT 1-10-1MOE 994
147690 42571 42582 TGAAGTTAATTC 1-10-1MOE 1138
147695 42669 42680 TCATTCCCCACT 1-10-1MOE 984
147078 43321 43332 CCTTCCACTGAT 1-10-1MOE 1044
147079 43322 43333 TCCTTCCACTGA 1-10-1MOE 1001
147716 43329 43340 TTAACGAGCCTT 1-10-1MOE 949
147078 43469 43480 CCTTCCACTGAT 1-10-1MOE 1044
147079 43470 43481 TCCTTCCACTGA 1-10-1MOE 1001
147080 43471 43482 CTCCTTCCACTG 1-10-1MOE 1021
398102 43837 43850 CTACCTGAGGATTT 2-10-2MOE 899
147074 43848 43859 CCACTGATCCTG 1-10-1MOE 845
401408 43871 43884 CAATGAAGCACAGG 2-10-2MOE 989
398102 43985 43998 CTACCTGAGGATTT 2-10-2MOE 899
147736 44137 44148 AGGTAGGAGAAG 1-10-1MOE 963
147746 44140 44151 TAAAAACAACAA 1-10-1MOE 1073
147687 44206 44217 CGACACGGGAAC 1-10-1MOE 950
147743 44223 44234 AGGGCTTCCAGT 1-10-1MOE 1042
384545 44242 44253 CAAGTAGGATGT 1-10-1MOE 951
147736 44285 44296 AGGTAGGAGAAG 1-10-1MOE 963
147743 44371 44382 AGGGCTTCCAGT 1-10-1MOE 1042
384545 44390 44401 CAAGTAGGATGT 1-10-1MOE 951
147728 44589 44600 GCCAGACAGAAG 1-10-1MOE 1013
389948 44628 44639 CCGTTGGACCCC 1-10-1MOE 915
147720 44703 44714 GATCTCTCGAGT 1-10-1MOE 1117
147728 44729 44740 GCCAGACAGAAG 1-10-1MOE 1013
147728 44737 44748 GCCAGACAGAAG 1-10-1MOE 1013
389948 44776 44787 CCGTTGGACCCC 1-10-1MOE 915
147720 44851 44862 GATCTCTCGAGT 1-10-1MOE 1117
398110 44861 44874 GTTCCCTTTGCAGG 2-10-2MOE 952
147728 44877 44888 GCCAGACAGAAG 1-10-1MOE 1013
147705 45092 45103 CGGTTTTTGTTC 1-10-1MOE 1002
147705 45240 45251 CGGTTTTTGTTC 1-10-1MOE 1002
147681 45337 45348 ATGTCATTAAAC 1-10-1MOE 965
147681 45485 45496 ATGTCATTAAAC 1-10-1MOE 965
147096 45660 45671 TTGTTGTTCCCT 1-10-1MOE 1107
147096 45808 45819 TTGTTGTTCCCT 1-10-1MOE 1107
368368 45976 45989 TCCACTGATCCTTA 2-10-2MOE 1127
147074 45977 45988 CCACTGATCCTG 1-10-1MOE 845
147075 45978 45989 TCCACTGATCCT 1-10-1MOE 1026
147076 45979 45990 TTCCACTGATCC 1-10-1MOE 1029
368368 46124 46137 TCCACTGATCCTTA 2-10-2MOE 1127
147075 46126 46137 TCCACTGATCCT 1-10-1MOE 1026
147076 46127 46138 TTCCACTGATCC 1-10-1MOE 1029
147705 46555 46566 CGGTTTTTGTTC 1-10-1MOE 1002
147714 46685 46696 TTCTGCTCCCAC 1-10-1MOE 986
147705 46703 46714 CGGTTTTTGTTC 1-10-1MOE 1002
147714 46833 46844 TTCTGCTCCCAC 1-10-1MOE 986
390030 47007 47018 TTTATAAAACTG 1-10-1MOE 1074
147746 47023 47034 TAAAAACAACAA 1-10-1MOE 1073
147746 47171 47182 TAAAAACAACAA 1-10-1MOE 1073
147085 47607 47618 TCTACACCAGGT 1-10-1MOE 961
147746 47609 47620 TAAAAACAACAA 1-10-1MOE 1073
147089 47611 47622 TCCCTCTACACC 1-10-1MOE 956
147091 47613 47624 GTTCCCTCTACA 1-10-1MOE 1004
401384 47689 47702 TGAACACATCACTA 2-10-2MOE 933
147691 47729 47740 GAGGTGGGAAAA 1-10-1MOE 966
147085 47755 47766 TCTACACCAGGT 1-10-1MOE 961
147087 47757 47768 CCTCTACACCAG 1-10-1MOE 982
147090 47760 47771 TTCCCTCTACAC 1-10-1MOE 955
147091 47761 47772 GTTCCCTCTACA 1-10-1MOE 1004
147099 47770 47781 GAGTTGTTGTTC 1-10-1MOE 1108
147100 47771 47782 CGAGTTGTTGTT 1-10-1MOE 1109
390030 47847 47858 TTTATAAAACTG 1-10-1MOE 1074
147691 47877 47888 GAGGTGGGAAAA 1-10-1MOE 966
147099 47918 47929 GAGTTGTTGTTC 1-10-1MOE 1108
147100 47919 47930 CGAGTTGTTGTT 1-10-1MOE 1109
390030 47995 48006 TTTATAAAACTG 1-10-1MOE 1074
147074 48222 48233 CCACTGATCCTG 1-10-1MOE 845
147731 48340 48351 TTTCCTCTTGTC 1-10-1MOE 934
147691 48393 48404 GAGGTGGGAAAA 1-10-1MOE 966
147731 48488 48499 TTTCCTCTTGTC 1-10-1MOE 934
147691 48541 48552 GAGGTGGGAAAA 1-10-1MOE 966
398147 48887 48900 CTACAGGACAATAC 2-10-2MOE 957
398147 49035 49048 CTACAGGACAATAC 2-10-2MOE 957
147074 49525 49536 CCACTGATCCTG 1-10-1MOE 845
398168 49742 49753 TCGGACTTTGAA 1-10-1MOE 1008
384545 49858 49869 CAAGTAGGATGT 1-10-1MOE 951
398168 49890 49901 TCGGACTTTGAA 1-10-1MOE 1008
147724 49974 49985 GAAATTGAGGAA 1-10-1MOE 1139
384545 50006 50017 CAAGTAGGATGT 1-10-1MOE 951
147689 50084 50095 CAGAGAAGGTCT 1-10-1MOE 987
147687 50102 50113 CGACACGGGAAC 1-10-1MOE 950
147724 50122 50133 GAAATTGAGGAA 1-10-1MOE 1139
147687 50250 50261 CGACACGGGAAC 1-10-1MOE 950
398117 50389 50402 TTTCCACTTGGGTG 2-10-2MOE 960
147736 50436 50447 AGGTAGGAGAAG 1-10-1MOE 963
147736 50582 50593 AGGTAGGAGAAG 1-10-1MOE 963
398168 50703 50714 TCGGACTTTGAA 1-10-1MOE 1008
401397 50822 50835 CTGGTCAGCATTGA 2-10-2MOE 946
147746 51019 51030 TAAAAACAACAA 1-10-1MOE 1073
147708 51101 51112 TTGATATAGTCA 1-10-1MOE 997
147746 51165 51176 TAAAAACAACAA 1-10-1MOE 1073
147746 51185 51196 TAAAAACAACAA 1-10-1MOE 1073
147708 51247 51258 TTGATATAGTCA 1-10-1MOE 997
147081 51287 51298 GCTCCTTCCACT 1-10-1MOE 1006
147082 51288 51299 AGCTCCTTCCAC 1-10-1MOE 1036
147746 51324 51335 TAAAAACAACAA 1-10-1MOE 1073
147746 51331 51342 TAAAAACAACAA 1-10-1MOE 1073
147728 51376 51387 GCCAGACAGAAG 1-10-1MOE 1013
147729 51406 51417 GTAAGAGGCAGG 1-10-1MOE 920
147081 51433 51444 GCTCCTTCCACT 1-10-1MOE 1006
147082 51434 51445 AGCTCCTTCCAC 1-10-1MOE 1036
147728 51492 51503 GCCAGACAGAAG 1-10-1MOE 1013
147728 51522 51533 GCCAGACAGAAG 1-10-1MOE 1013
147729 51552 51563 GTAAGAGGCAGG 1-10-1MOE 920
368360 51633 51646 AAGCTCCTTCCACT 2-10-2MOE 1035
147082 51634 51645 AGCTCCTTCCAC 1-10-1MOE 1036
368361 51635 51648 GAAAGCTCCTTCCA 2-10-2MOE 962
147728 51638 51649 GCCAGACAGAAG 1-10-1MOE 1013
147695 51644 51655 TCATTCCCCACT 1-10-1MOE 984
147736 51713 51724 AGGTAGGAGAAG 1-10-1MOE 963
147684 51721 51732 ACCCAGTCAGGG 1-10-1MOE 964
147081 51779 51790 GCTCCTTCCACT 1-10-1MOE 1006
368360 51779 51792 AAGCTCCTTCCACT 2-10-2MOE 1035
147082 51780 51791 AGCTCCTTCCAC 1-10-1MOE 1036
368361 51781 51794 GAAAGCTCCTTCCA 2-10-2MOE 962
147695 51790 51801 TCATTCCCCACT 1-10-1MOE 984
147736 51859 51870 AGGTAGGAGAAG 1-10-1MOE 963
147077 51988 51999 CTTCCACTGATC 1-10-1MOE 1047
147079 51990 52001 TCCTTCCACTGA 1-10-1MOE 1001
147746 52064 52075 TAAAAACAACAA 1-10-1MOE 1073
147681 52085 52096 ATGTCATTAAAC 1-10-1MOE 965
147077 52134 52145 CTTCCACTGATC 1-10-1MOE 1047
147079 52136 52147 TCCTTCCACTGA 1-10-1MOE 1001
147691 52166 52177 GAGGTGGGAAAA 1-10-1MOE 966
147719 52252 52263 CCAACTCCAACT 1-10-1MOE 1116
147691 52312 52323 GA GGTGGGAAAA 1-10-1MOE 966
147719 52398 52409 CCAACTCCAACT 1-10-1MOE 1116
147728 52428 52439 GCCAGACAGAAG 1-10-1MOE 1013
147729 52483 52494 GTAAGAGGCAGG 1-10-1MOE 920
398167 52527 52538 CAGGCCATGTGG 1-10-1MOE 1059
147682 52571 52582 CGGGTACTATGG 1-10-1MOE 992
147728 52574 52585 GCCAGACAGAAG 1-10-1MOE 1013
147724 52615 52626 GAAATTGAGGAA 1-10-1MOE 1139
147729 52629 52640 GTAAGAGGCAGG 1-10-1MOE 920
147703 52670 52681 TGGCTTCATGTC 1-10-1MOE 971
398167 52673 52684 CAGGCCATGTGG 1-10-1MOE 1059
398165 52708 52719 GTTCTTAGGAAG 1-10-1MOE 968
147704 52710 52721 TTGTTCTTAGGA 1-10-1MOE 1012
147705 52716 52727 CGGTTTTTGTTC 1-10-1MOE 1002
147724 52761 52772 GAAATTGAGGAA 1-10-1MOE 1139
398167 52762 52773 CAGGCCATGTGG 1-10-1MOE 1059
147703 52816 52827 TGGCTTCATGTC 1-10-1MOE 971
398165 52854 52865 GTTCTTAGGAAG 1-10-1MOE 968
147704 52856 52867 TTGTTCTTAGGA 1-10-1MOE 1012
147705 52862 52873 CGGTTTTTGTTC 1-10-1MOE 1002
398167 52908 52919 CAGGCCATGTGG 1-10-1MOE 1059
147689 53063 53074 CAGAGAAGGTCT 1-10-1MOE 987
147727 53111 53122 CAGTGGACCACA 1-10-1MOE 1128
147727 53158 53169 CAGTGGACCACA 1-10-1MOE 1128
147689 53209 53220 CAGAGAAGGTCT 1-10-1MOE 987
147727 53257 53268 CAGTGGACCACA 1-10-1MOE 1128
147727 53304 53315 CAGTGGACCACA 1-10-1MOE 1128
147680 53638 53649 GTATGCACTGCT 1-10-1MOE 988
147722 53650 53661 AAAGTCAGGCCA 1-10-1MOE 1130
147083 53703 53714 TACACCAGGTCA 1-10-1MOE 973
147085 53705 53716 TCTACACCAGGT 1-10-1MOE 961
147086 53706 53717 CTCTACACCAGG 1-10-1MOE 969
398167 53724 53735 CAGGCCATGTGG 1-10-1MOE 1059
147684 53747 53758 ACCCAGTCAGGG 1-10-1MOE 964
147680 53784 53795 GTATGCACTGCT 1-10-1MOE 988
147722 53796 53807 AAAGTCAGGCCA 1-10-1MOE 1130
147085 53851 53862 TCTACACCAGGT 1-10-1MOE 961
398167 53870 53881 CAGGCCATGTGG 1-10-1MOE 1059
147684 53893 53904 ACCCAGTCAGGG 1-10-1MOE 964
398155 54026 54039 TGTTTTTACACAGA 2-10-2MOE 970
147703 54137 54148 TGGCTTCATGTC 1-10-1MOE 971
398155 54172 54185 TGTTTTTACACAGA 2-10-2MOE 970
147705 54275 54286 CGGTTTTTGTTC 1-10-1MOE 1002
147703 54283 54294 TGGCTTCATGTC 1-10-1MOE 971
147705 54421 54432 CGGTTTTTGTTC 1-10-1MOE 1002
147727 54853 54864 CAGTGGACCACA 1-10-1MOE 1128
398165 54963 54974 GTTCTTAGGAAG 1-10-1MOE 968
398090 54963 54976 TTGTTCTTAGGAAG 2-10-2MOE 972
147704 54965 54976 TTGTTCTTAGGA 1-10-1MOE 1012
147705 54971 54982 CGGTTTTTGTTC 1-10-1MOE 1002
147727 54999 55010 CAGTGGACCACA 1-10-1MOE 1128
398165 55109 55120 GTTCTTAGGAAG 1-10-1MOE 968
147704 55111 55122 TTGTTCTTAGGA 1-10-1MOE 1012
147705 55117 55128 CGGTTTTTGTTC 1-10-1MOE 1002
147083 55352 55363 TACACCAGGTCA 1-10-1MOE 973
147705 55378 55389 CGGTTTTTGTTC 1-10-1MOE 1002
147705 55524 55535 CGGTTTTTGTTC 1-10-1MOE 1002
147712 55819 55830 ACACCATCTCCC 1-10-1MOE 1005
147712 55965 55976 ACACCATCTCCC 1-10-1MOE 1005
147733 56289 56300 TTCTTGATGTCC 1-10-1MOE 891
147707 56300 56311 TAGTCATTATCT 1-10-1MOE 977
147708 56306 56317 TTGATATAGTCA 1-10-1MOE 997
390030 56321 56332 TTTATAAAACTG 1-10-1MOE 1074
147081 56333 56344 GCTCCTTCCACT 1-10-1MOE 1006
398166 56335 56346 GGGCTTCTTCCA 1-10-1MOE 1070
147733 56435 56446 TTCTTGATGTCC 1-10-1MOE 891
147707 56446 56457 TAGTCATTATCT 1-10-1MOE 977
147708 56452 56463 TTGATATAGTCA 1-10-1MOE 997
390030 56467 56478 TTTATAAAACTG 1-10-1MOE 1074
147081 56479 56490 GCTCCTTCCACT 1-10-1MOE 1006
398091 56479 56492 GGGCTTCTTCCATT 2-10-2MOE 979
398166 56481 56492 GGGCTTCTTCCA 1-10-1MOE 1070
368366 56518 56531 CTGATCCTTAGAAG 2-10-2MOE 1019
147743 57612 57623 AGGGCTTCCAGT 1-10-1MOE 1042
147700 57709 57720 GCGCTAGGCCGC 1-10-1MOE 1110
147743 57758 57769 AGGGCTTCCAGT 1-10-1MOE 1042
147700 57855 57866 GCGCTAGGCCGC 1-10-1MOE 1110
398093 57963 57976 TCGGACTTTGAAAA 2-10-2MOE 1009
398168 57965 57976 TCGGACTTTGAA 1-10-1MOE 1008
147698 58105 58116 CCCGCCACCACC 1-10-1MOE 928
398093 58109 58122 TCGGACTTTGAAAA 2-10-2MOE 1009
398168 58111 58122 TCGGACTTTGAA 1-10-1MOE 1008
147698 58251 58262 CCCGCCACCACC 1-10-1MOE 928
147735 58279 58290 GGAGAAGCGCAG 1-10-1MOE 1016
147735 58425 58436 GGAGAAGCGCAG 1-10-1MOE 1016
404135 58946 58959 CATTTCCATGGCCA 2-10-2MOE 1056
390030 59326 59337 TTTATAAAACTG 1-10-1MOE 1074
147711 59357 59368 AAGGGCCCTGGG 1-10-1MOE 1040
147743 59382 59393 AGGGCTTCCAGT 1-10-1MOE 1042
147711 59503 59514 AAGGGCCCTGGG 1-10-1MOE 1040
147743 59528 59539 AGGGCTTCCAGT 1-10-1MOE 1042
147695 59576 59587 TCATTCCCCACT 1-10-1MOE 984
147713 59716 59727 CTCCCACACCAT 1-10-1MOE 985
147714 59721 59732 TTCTGCTCCCAC 1-10-1MOE 986
147715 59746 59757 GTTGAGCATGAC 1-10-1MOE 1077
147716 59771 59782 TTAACGAGCCTT 1-10-1MOE 949
147712 59857 59868 ACACCATCTCCC 1-10-1MOE 1005
147714 59867 59878 TTCTGCTCCCAC 1-10-1MOE 986
147715 59892 59903 GTTGAGCATGAC 1-10-1MOE 1077
147716 59917 59928 TTAA CGAGCCTT 1-10-1MOE 949
390030 59993 60004 TTTATAAAACTG 1-10-1MOE 1074
147690 60270 60281 TGAAGTTAATTC 1-10-1MOE 1138
389949 60325 60336 GCGCGAGCCCGA 1-10-1MOE 1061
147690 60416 60427 TGAAGTTAATTC 1-10-1MOE 1138
389949 60471 60482 GCGCGAGCCCGA 1-10-1MOE 1061
147746 60619 60630 TAAAAACAACAA 1-10-1MOE 1073
384545 60676 60687 CAAGTAGGATGT 1-10-1MOE 951
147746 60765 60776 TAAAAACAACAA 1-10-1MOE 1073
384545 60822 60833 CAAGTAGGATGT 1-10-1MOE 951
147689 60967 60978 CAGAGAAGGTCT 1-10-1MOE 987
147689 61008 61019 CAGAGAAGGTCT 1-10-1MOE 987
147689 61049 61060 CAGAGAAGGTCT 1-10-1MOE 987
398105 61121 61134 TGCACAGGCAGGTT 2-10-2MOE 1066
147689 61154 61165 CAGAGAAGGTCT 1-10-1MOE 987
147689 61195 61206 CAGAGAAGGTCT 1-10-1MOE 987
398105 61267 61280 TGCACAGGCAGGTT 2-10-2MOE 1066
147692 61365 61376 CTCACCTTCATG 1-10-1MOE 1113
147692 61511 61522 CTCACCTTCATG 1-10-1MOE 1113
147680 61619 61630 GTATGCACTGCT 1-10-1MOE 988
147078 61755 61766 CCTTCCACTGAT 1-10-1MOE 1044
147079 61756 61767 TCCTTCCACTGA 1-10-1MOE 1001
147080 61757 61768 CTCCTTCCACTG 1-10-1MOE 1021
147078 61901 61912 CCTTCCACTGAT 1-10-1MOE 1044
147079 61902 61913 TCCTTCCACTGA 1-10-1MOE 1001
147080 61903 61914 CTCCTTCCACTG 1-10-1MOE 1021
147088 62361 62372 CCCTCTACACCA 1-10-1MOE 1050
401384 62573 62586 TGAACACATCACTA 2-10-2MOE 933
147688 62697 62708 TCCCAAACAAAT 1-10-1MOE 990
147746 63102 63113 TAAAAACAACAA 1-10-1MOE 1073
147721 63225 63236 AATGCAGGATCT 1-10-1MOE 1118
147742 63226 63237 AACTTCAGTGTC 1-10-1MOE 1041
147746 63248 63259 TAAAAACAACAA 1-10-1MOE 1073
147682 63337 63348 CGGGTACTATGG 1-10-1MOE 992
147721 63371 63382 AATGCAGGATCT 1-10-1MOE 1118
147742 63372 63383 AACTTCAGTGTC 1-10-1MOE 1041
147688 63401 63412 TCCCAAACAAAT 1-10-1MOE 990
147097 63449 63460 GTTGTTGTTCCC 1-10-1MOE 1111
147098 63450 63461 AGTTGTTGTTCC 1-10-1MOE 1112
401409 63458 63471 ATTCTTAACACAGA 2-10-2MOE 991
147084 63531 63542 CTACACCAGGTC 1-10-1MOE 993
147688 63547 63558 TCCCAAACAAAT 1-10-1MOE 990
147097 63595 63606 GTTGTTGTTCCC 1-10-1MOE 1111
147098 63596 63607 AGTTGTTGTTCC 1-10-1MOE 1112
147721 64086 64097 AATGCAGGATCT 1-10-1MOE 1118
147721 64232 64243 AATGCAGGATCT 1-10-1MOE 1118
147692 64233 64244 CTCACCTTCATG 1-10-1MOE 1113
147692 64379 64390 CTCACCTTCATG 1-10-1MOE 1113
147729 64633 64644 GTAAGAGGCAGG 1-10-1MOE 920
401403 64746 64759 TTTCCTAGGAGGTG 2-10-2MOE 967
147729 64779 64790 GTAAGAGGCAGG 1-10-1MOE 920
147746 65151 65162 TAAAAACAACAA 1-10-1MOE 1073
147746 65297 65308 TAAAAACAACAA 1-10-1MOE 1073
147689 65302 65313 CAGAGAAGGTCT 1-10-1MOE 987
147689 65448 65459 CAGAGAAGGTCT 1-10-1MOE 987
147717 65862 65873 ATCTTCAGAGAT 1-10-1MOE 996
147717 65895 65906 ATCTTCAGAGAT 1-10-1MOE 996
147729 66000 66011 GTAAGAGGCAGG 1-10-1MOE 920
147717 66008 66019 ATCTTCAGAGAT 1-10-1MOE 996
147717 66041 66052 ATCTTCAGAGAT 1-10-1MOE 996
147708 66046 66057 TTGATATAGTCA 1-10-1MOE 997
147718 66055 66066 TAATATGACTTG 1-10-1MOE 998
147729 66146 66157 GTAAGAGGCAGG 1-10-1MOE 920
147089 66236 66247 TCCCTCTACACC 1-10-1MOE 956
368363 66281 66294 CTTAGAAGGCAGCA 2-10-2MOE 1114
147727 66293 66304 CAGTGGACCACA 1-10-1MOE 1128
147093 66319 66330 TTGTTCCCTCTA 1-10-1MOE 929
147094 66320 66331 GTTGTTCCCTCT 1-10-1MOE 1115
147089 66382 66393 TCCCTCTACACC 1-10-1MOE 956
368363 66427 66440 CTTAGAAGGCAGCA 2-10-2MOE 1114
147727 66439 66450 CAGTGGACCACA 1-10-1MOE 1128
147719 66441 66452 CCAACTCCAACT 1-10-1MOE 1116
147093 66465 66476 TTGTTCCCTCTA 1-10-1MOE 929
147094 66466 66477 GTTGTTCCCTCT 1-10-1MOE 1115
147075 66561 66572 TCCACTGATCCT 1-10-1MOE 1026
368357 66562 66575 CCTTCCACTGATCC 2-10-2MOE 1046
147076 66562 66573 TTCCACTGATCC 1-10-1MOE 1029
368377 66562 66577 CTCCTTCCACTGATCC 3-10-3MOE 1030
147077 66563 66574 CTTCCACTGATC 1-10-1MOE 1047
368358 66563 66576 TCCTTCCACTGATC 2-10-2MOE 1031
147078 66564 66575 CCTTCCACTGAT 1-10-1MOE 1044
147079 66565 66576 TCCTTCCACTGA 1-10-1MOE 1001
147080 66566 66577 CTCCTTCCACTG 1-10-1MOE 1021
147081 66567 66578 GCTCCTTCCACT 1-10-1MOE 1006
147719 66587 66598 CCAACTCCAACT 1-10-1MOE 1116
147075 66707 66718 TCCACTGATCCT 1-10-1MOE 1026
368377 66708 66723 CTCCTTCCACTGATCC 3-10-3MOE 1030
147076 66708 66719 TTCCACTGATCC 1-10-1MOE 1029
368357 66708 66721 CCTTCCACTGATCC 2-10-2MOE 1046
147077 66709 66720 CTTCCACTGATC 1-10-1MOE 1047
147078 66710 66721 CCTTCCACTGAT 1-10-1MOE 1044
147079 66711 66722 TCCTTCCACTGA 1-10-1MOE 1001
147080 66712 66723 CTCCTTCCACTG 1-10-1MOE 1021
147081 66713 66724 GCTCCTTCCACT 1-10-1MOE 1006
147089 66842 66853 TCCCTCTACACC 1-10-1MOE 956
147089 66988 66999 TCCCTCTACACC 1-10-1MOE 956
147075 66999 67010 TCCACTGATCCT 1-10-1MOE 1026
147075 67145 67156 TCCACTGATCCT 1-10-1MOE 1026
147705 67213 67224 CGGTTTTTGTTC 1-10-1MOE 1002
401413 67301 67314 TGCAGCCATGTACT 2-10-2MOE 1022
147737 67309 67320 ACAGCCAGGTAG 1-10-1MOE 1067
147080 67430 67441 CTCCTTCCACTG 1-10-1MOE 1021
147737 67455 67466 ACAGCCAGGTAG 1-10-1MOE 1067
147080 67576 67587 CTCCTTCCACTG 1-10-1MOE 1021
147082 67578 67589 AGCTCCTTCCAC 1-10-1MOE 1036
147090 67582 67593 TTCCCTCTACAC 1-10-1MOE 955
147091 67583 67594 GTTCCCTCTACA 1-10-1MOE 1004
147742 67591 67602 AACTTCAGTGTC 1-10-1MOE 1041
147090 67728 67739 TTCCCTCTACAC 1-10-1MOE 955
147698 68036 68047 CCCGCCACCACC 1-10-1MOE 928
147698 68182 68193 CCCGCCACCACC 1-10-1MOE 928
147681 68267 68278 ATGTCATTAAAC 1-10-1MOE 965
147721 68386 68397 AATGCAGGATCT 1-10-1MOE 1118
147681 68413 68424 ATGTCATTAAAC 1-10-1MOE 965
147712 68527 68538 ACACCATCTCCC 1-10-1MOE 1005
147721 68532 68543 AATGCAGGATCT 1-10-1MOE 1118
147711 68760 68771 AAGGGCCCTGGG 1-10-1MOE 1040
147711 68906 68917 AAGGGCCCTGGG 1-10-1MOE 1040
147696 69045 69056 TGGATGATTGGC 1-10-1MOE 906
147696 69191 69202 TGGATGATTGGC 1-10-1MOE 906
147723 69194 69205 GACTCCAAAGTC 1-10-1MOE 892
147723 69210 69221 GACTCCAAA GTC 1-10-1MOE 892
389965 69271 69282 CTGCAACATGAT 1-10-1MOE 1018
389764 69271 69282 CTGCAACATGAT 1-9-2MOE 1018
147723 69340 69351 GACTCCAAAGTC 1-10-1MOE 892
147723 69356 69367 GACTCCAAAGTC 1-10-1MOE 892
398101 69357 69370 TTTGATAAAGCCCT 2-10-2MOE 1064
389965 69417 69428 CTGCAACATGAT 1-10-1MOE 1018
389764 69417 69428 CTGCAACATGAT 1-9-2MOE 1018
398101 69503 69516 TTTGATAAAGCCCT 2-10-2MOE 1064
368353 69519 69532 CACTGATCCTGCAC 2-10-2MOE 1007
147074 69522 69533 CCACTGATCCTG 1-10-1MOE 845
147081 69631 69642 GCTCCTTCCACT 1-10-1MOE 1006
368353 69665 69678 CACTGATCCTGCAC 2-10-2MOE 1007
147720 69729 69740 GATCTCTCGAGT 1-10-1MOE 1117
147721 69736 69747 AATGCAGGATCT 1-10-1MOE 1118
398167 69757 69768 CAGGCCATGTGG 1-10-1MOE 1059
147722 69762 69773 AAAGTCAGGCCA 1-10-1MOE 1130
147723 69768 69779 GACTCCAAA GTC 1-10-1MOE 892
147080 69776 69787 CTCCTTCCACTG 1-10-1MOE 1021
147081 69777 69788 GCTCCTTCCACT 1-10-1MOE 1006
398093 69811 69824 TCGGACTTTGAAAA 2-10-2MOE 1009
398168 69813 69824 TCGGACTTTGAA 1-10-1MOE 1008
147725 69814 69825 CTCGGACTTTGA 1-10-1MOE 1119
147726 69819 69830 TGACTCTCGGAC 1-10-1MOE 1120
147727 69860 69871 CAGTGGACCACA 1-10-1MOE 1128
147720 69875 69886 GATCTCTCGAGT 1-10-1MOE 1117
147721 69882 69893 AATGCAGGATCT 1-10-1MOE 1118
147728 69899 69910 GCCAGACAGAAG 1-10-1MOE 1013
398094 69901 69914 ATCAGCCAGACAGA 2-10-2MOE 1010
398167 69903 69914 CAGGCCATGTGG 1-10-1MOE 1059
398092 69904 69917 AGTCAGGCCATGTG 2-10-2MOE 1060
147722 69908 69919 AAAGTCAGGCCA 1-10-1MOE 1130
147723 69914 69925 GACTCCAAAGTC 1-10-1MOE 892
147729 69916 69927 GTAAGAGGCAGG 1-10-1MOE 920
398095 69919 69932 CATCAGCAAGAGGC 2-10-2MOE 1011
398093 69957 69970 TCGGACTTTGAAAA 2-10-2MOE 1009
398168 69959 69970 TCGGACTTTGAA 1-10-1MOE 1008
147725 69960 69971 CTCGGACTTTGA 1-10-1MOE 1119
147726 69965 69976 TGACTCTCGGAC 1-10-1MOE 1120
147704 69991 70002 TTGTTCTTAGGA 1-10-1MOE 1012
147727 70006 70017 CAGTGGACCACA 1-10-1MOE 1128
147728 70045 70056 GCCAGACAGAAG 1-10-1MOE 1013
398094 70047 70060 ATCAGCCAGACAGA 2-10-2MOE 1010
398169 70048 70059 TCAGCCAGACAG 1-10-1MOE 909
147729 70062 70073 GTAAGAGGCAGG 1-10-1MOE 920
398095 70065 70078 CATCAGCAAGAGGC 2-10-2MOE 1011
147704 70137 70148 TTGTTCTTAGGA 1-10-1MOE 1012
147697 70161 70172 CCCCAGCAGCGG 1-10-1MOE 1000
147697 70307 70318 CCCCAGCAGCGG 1-10-1MOE 1000
147728 70450 70461 GCCAGACAGAAG 1-10-1MOE 1013
398164 70464 70475 TTGTCGATCTGC 1-10-1MOE 1014
147730 70465 70476 CTTGTCCATCAG 1-10-1MOE 1121
147731 70471 70482 TTTCCTCTTGTC 1-10-1MOE 934
147732 70476 70487 GGGTCTTTCCTC 1-10-1MOE 1122
147733 70497 70508 TTCTTGATGTCC 1-10-1MOE 891
398096 70562 70575 GGAGAAGCGCAGCT 2-10-2MOE 1015
147735 70564 70575 GGAGAAGCGCAG 1-10-1MOE 1016
147736 70569 70580 AGGTAGGAGAAG 1-10-1MOE 963
147737 70575 70586 ACAGCCAGGTAG 1-10-1MOE 1067
147728 70596 70607 GCCAGACAGAAG 1-10-1MOE 1013
398164 70610 70621 TTGTCGATCTGC 1-10-1MOE 1014
147730 70611 70622 CTTGTCCATCAG 1-10-1MOE 1121
368349 70616 70629 CTGCACTGACGAGT 2-10-2MOE 1017
147731 70617 70628 TTTCCTCTTGTC 1-10-1MOE 934
147732 70622 70633 GGGTCTTTCCTC 1-10-1MOE 1122
147733 70643 70654 TTCTTGATGTCC 1-10-1MOE 891
398096 70708 70721 GGAGAAGCGCAGCT 2-10-2MOE 1015
147735 70710 70721 GGAGAAGCGCAG 1-10-1MOE 1016
147736 70715 70726 AGGTAGGAGAAG 1-10-1MOE 963
147737 70721 70732 ACAGCCAGGTAG 1-10-1MOE 1067
389764 70784 70795 CTGCAACATGAT 1-9-2MOE 1018
389965 70784 70795 CTGCAACATGAT 1-10-1MOE 1018
389965 70930 70941 CTGCAACATGAT 1-10-1MOE 1018
389764 70930 70941 CTGCAACATGAT 1-9-2MOE 1018
368386 70995 71010 CACTGATCCTTAGAAG 3-10-3MOE 1123
368367 70997 71010 CACTGATCCTTAGA 2-10-2MOE 1124
368387 70997 71012 TCCACTGATCCTTAGA 3-10-3MOE 1125
368354 70999 71012 TCCACTGATCCTGC 2-10-2MOE 1024
368374 70999 71014 CTTCCACTGATCCTGC 3-10-3MOE 1126
368368 70999 71012 TCCACTGATCCTTA 2-10-2MOE 1127
368388 70999 71014 CTTCCACTGATCCTTA 3-10-3MOE 895
368355 71000 71013 TTCCACTGATCCTG 2-10-2MOE 1025
147074 71000 71011 CCACTGATCCTG 1-10-1MOE 845
368375 71000 71015 CCTTCCACTGATCCTG 3-10-3MOE 1020
147075 71001 71012 TCCACTGATCCT 1-10-1MOE 1026
368376 71001 71016 TCCTTCCACTGATCCT 3-10-3MOE 1028
147076 71002 71013 TTCCACTGATCC 1-10-1MOE 1029
368357 71002 71015 CCTTCCACTGATCC 2-10-2MOE 1046
368377 71002 71017 CTCCTTCCACTGATCC 3-10-3MOE 1030
147077 71003 71014 CTTCCACTGATC 1-10-1MOE 1047
368378 71003 71018 GCTCCTTCCACTGATC 3-10-3MOE 1032
147078 71004 71015 CCTTCCACTGAT 1-10-1MOE 1044
368359 71005 71018 GCTCCTTCCACTGA 2-10-2MOE 1033
368379 71005 71020 AAGCTCCTTCCACTGA 3-10-3MOE 1034
147079 71005 71016 TCCTTCCACTGA 1-10-1MOE 1001
147080 71006 71017 CTCCTTCCACTG 1-10-1MOE 1021
368360 71007 71020 AAGCTCCTTCCACT 2-10-2MOE 1035
368380 71007 71022 GAAAGCTCCTTCCACT 3-10-3MOE 896
147081 71007 71018 GCTCCTTCCACT 1-10-1MOE 1006
147082 71008 71019 AGCTCCTTCCAC 1-10-1MOE 1036
368361 71009 71022 GAAAGCTCCTTCCA 2-10-2MOE 962
368381 71009 71024 GGGAAAGCTCCTTCCA 3-10-3MOE 1037
147738 71067 71078 TGGGTGGCCGGG 1-10-1MOE 1069
147739 71071 71082 CGTTTGGGTGGC 1-10-1MOE 1023
147740 71088 71099 TGTGAGGCTCCA 1-10-1MOE 1062
147741 71129 71140 CACCCACTGGTG 1-10-1MOE 1055
368366 71141 71154 CTGATCCTTAGAAG 2-10-2MOE 1019
368386 71141 71156 CACTGATCCTTAGAAG 3-10-3MOE 1123
368367 71143 71156 CACTGATCCTTAGA 2-10-2MOE 1124
368387 71143 71158 TCCACTGATCCTTAGA 3-10-3MOE 1125
368374 71145 71160 CTTCCACTGATCCTGC 3-10-3MOE 1126
368354 71145 71158 TCCACTGATCCTGC 2-10-2MOE 1024
368368 71145 71158 TCCACTGATCCTTA 2-10-2MOE 1127
368388 71145 71160 CTTCCACTGATCCTTA 3-10-3MOE 895
368355 71146 71159 TTCCACTGATCCTG 2-10-2MOE 1025
368375 71146 71161 CCTTCCACTGATCCTG 3-10-3MOE 1020
147075 71147 71158 TCCACTGATCCT 1-10-1MOE 1026
368356 71147 71160 CTTCCACTGATCCT 2-10-2MOE 1027
368376 71147 71162 TCCTTCCACTGATCCT 3-10-3MOE 1028
147076 71148 71159 TTCCACTGATCC 1-10-1MOE 1029
368357 71148 71161 CCTTCCACTGATCC 2-10-2MOE 1046
368377 71148 71163 CTCCTTCCACTGATCC 3-10-3MOE 1030
147077 71149 71160 CTTCCACTGATC 1-10-1MOE 1047
368358 71149 71162 TCCTTCCACTGATC 2-10-2MOE 1031
368378 71149 71164 GCTCCTTCCACTGATC 3-10-3MOE 1032
147078 71150 71161 CCTTCCACTGAT 1-10-1MOE 1044
368359 71151 71164 GCTCCTTCCACTGA 2-10-2MOE 1033
147079 71151 71162 TCCTTCCACTGA 1-10-1MOE 1001
368379 71151 71166 AAGCTCCTTCCACTGA 3-10-3MOE 1034
147080 71152 71163 CTCCTTCCACTG 1-10-1MOE 1021
368380 71153 71168 GAAAGCTCCTTCCACT 3-10-3MOE 896
147081 71153 71164 GCTCCTTCCACT 1-10-1MOE 1006
368360 71153 71166 AAGCTCCTTCCACT 2-10-2MOE 1035
147082 71154 71165 AGCTCCTTCCAC 1-10-1MOE 1036
368381 71155 71170 GGGAAAGCTCCTTCCA 3-10-3MOE 1037
368361 71155 71168 GAAAGCTCCTTCCA 2-10-2MOE 962
398097 71158 71171 GGCAGTCTTTATCC 2-10-2MOE 897
147738 71213 71224 TGGGTGGCCGGG 1-10-1MOE 1069
147739 71217 71228 CGTTTGGGTGGC 1-10-1MOE 1023
147740 71234 71245 TGTGAGGCTCCA 1-10-1MOE 1062
147741 71275 71286 CACCCACTGGTG 1-10-1MOE 1055
398097 71304 71317 GGCAGTCTTTATCC 2-10-2MOE 897
147727 71702 71713 CAGTGGACCACA 1-10-1MOE 1128
147727 71848 71859 CAGTGGACCACA 1-10-1MOE 1128
390030 71986 71997 TTTATAAAACTG 1-10-1MOE 1074
147102 72015 72026 TGCGAGTTGTTG 1-10-1MOE 1129
390030 72132 72143 TTTATAAAACTG 1-10-1MOE 1074
147102 72161 72172 TGCGAGTTGTTG 1-10-1MOE 1129
147722 72199 72210 AAAGTCAGGCCA 1-10-1MOE 1130
147696 72232 72243 TGGATGATTGGC 1-10-1MOE 906
147741 72254 72265 CACCCACTGGTG 1-10-1MOE 1055
147722 72345 72356 AAAGTCAGGCCA 1-10-1MOE 1130
147696 72378 72389 TGGATGATTGGC 1-10-1MOE 906
147741 72400 72411 CACCCACTGGTG 1-10-1MOE 1055
147711 72446 72457 AAGGGCCCTGGG 1-10-1MOE 1040
398098 72574 72587 TAACTTCAGTGTCT 2-10-2MOE 1131
147742 72575 72586 AACTTCAGTGTC 1-10-1MOE 1041
147698 72595 72606 CCCGCCACCACC 1-10-1MOE 928
147743 72690 72701 AGGGCTTCCAGT 1-10-1MOE 1042
398099 72690 72703 GAAGGGCTTCCAGT 2-10-2MOE 1132
147744 72694 72705 AGGAAGGGCTTC 1-10-1MOE 1043
398100 72697 72710 TGACCAGGAAGGGC 2-10-2MOE 1133
147745 72700 72711 TTGACCAGGAAG 1-10-1MOE 1058
398098 72720 72733 TAACTTCAGTGTCT 2-10-2MOE 1131
147742 72721 72732 AACTTCAGTGTC 1-10-1MOE 1041
147698 72741 72752 CCCGCCACCACC 1-10-1MOE 928
398157 72757 72770 GGAAACATACCCTG 2-10-2MOE 1045
147743 72836 72847 AGGGCTTCCAGT 1-10-1MOE 1042
398099 72836 72849 GAAGGGCTTCCAGT 2-10-2MOE 1132
147744 72840 72851 AGGAAGGGCTTC 1-10-1MOE 1043
398100 72843 72856 TGACCAGGAAGGGC 2-10-2MOE 1133
147745 72846 72857 TTGACCAGGAAG 1-10-1MOE 1058
147076 72898 72909 TTCCACTGATCC 1-10-1MOE 1029
368357 72898 72911 CCTTCCACTGATCC 2-10-2MOE 1046
147077 72899 72910 CTTCCACTGATC 1-10-1MOE 1047
147078 72900 72911 CCTTCCACTGAT 1-10-1MOE 1044
398157 72903 72916 GGAAACATACCCTG 2-10-2MOE 1045
398158 72983 72996 AGGCCCTGAGATTA 2-10-2MOE 1134
398159 72988 73001 GGTTAAGGCCCTGA 2-10-2MOE 1135
398160 72993 73006 GAATAGGTTAAGGC 2-10-2MOE 1048
147076 73044 73055 TTCCACTGATCC 1-10-1MOE 1029
368357 73044 73057 CCTTCCACTGATCC 2-10-2MOE 1046
147077 73045 73056 CTTCCACTGATC 1-10-1MOE 1047
147078 73046 73057 CCTTCCACTGAT 1-10-1MOE 1044
147746 73052 73063 TAAAAACAACAA 1-10-1MOE 1073
398161 73092 73105 AACAATGTGTTGTA 2-10-2MOE 1049
147746 73101 73112 TAAAAACAACAA 1-10-1MOE 1073
398158 73129 73142 AGGCCCTGAGATTA 2-10-2MOE 1134
398159 73134 73147 GGTTAAGGCCCTGA 2-10-2MOE 1135
398160 73139 73152 GAATAGGTTAAGGC 2-10-2MOE 1048
147746 73198 73209 TAAAAACAACAA 1-10-1MOE 1073
398161 73238 73251 AACAATGTGTTGTA 2-10-2MOE 1049
147746 73247 73258 TAAAAACAACAA 1-10-1MOE 1073
147088 73273 73284 CCCTCTACACCA 1-10-1MOE 1050
398105 73401 73414 TGCACAGGCAGGTT 2-10-2MOE 1066
398105 73547 73560 TGCACAGGCAGGTT 2-10-2MOE 1066
147741 73559 73570 CACCCACTGGTG 1-10-1MOE 1055
147741 73705 73716 CACCCACTGGTG 1-10-1MOE 1055
398162 73968 73981 ACCAAACAGTTCAG 2-10-2MOE 1057
147745 73991 74002 TTGACCAGGAAG 1-10-1MOE 1058
398167 74008 74019 CAGGCCATGTGG 1-10-1MOE 1059
398092 74009 74022 AGTCAGGCCATGTG 2-10-2MOE 1060
398162 74114 74127 ACCAAACAGTTCAG 2-10-2MOE 1057
147745 74137 74148 TTGACCAGGAAG 1-10-1MOE 1058
398167 74154 74165 CAGGCCATGTGG 1-10-1MOE 1059
147089 74280 74291 TCCCTCTACACC 1-10-1MOE 956
147090 74281 74292 TTCCCTCTACAC 1-10-1MOE 955
389949 74310 74321 GCGCGAGCCCGA 1-10-1MOE 1061
147740 74339 74350 TGTGAGGCTCCA 1-10-1MOE 1062
389950 74381 74392 CCCTGAAGGTTC 1-10-1MOE 1063
147089 74426 74437 TCCCTCTACACC 1-10-1MOE 956
147090 74427 74438 TTCCCTCTACAC 1-10-1MOE 955
389949 74456 74467 GCGCGAGCCCGA 1-10-1MOE 1061
147685 74490 74501 GGCTGACATTCA 1-10-1MOE 975
398101 74510 74523 TTTGATAAAGCCCT 2-10-2MOE 1064
398102 74536 74549 CTACCTGAGGATTT 2-10-2MOE 899
398103 74543 74556 CCCAGTACTACCTG 2-10-2MOE 900
147685 74636 74647 GGCTGACATTCA 1-10-1MOE 975
398102 74682 74695 CTACCTGAGGATTT 2-10-2MOE 899
398103 74689 74702 CCCAGTACTACCTG 2-10-2MOE 900
147736 74737 74748 AGGTAGGAGAAG 1-10-1MOE 963
398104 74805 74818 CAAGAAGACCTTAC 2-10-2MOE 1065
147736 74883 74894 AGGTAGGAGAAG 1-10-1MOE 963
147737 74893 74904 ACAGCCAGGTAG 1-10-1MOE 1067
398105 74894 74907 TGCACAGGCAGGTT 2-10-2MOE 1066
147737 74919 74930 ACAGCCAGGTAG 1-10-1MOE 1067
398095 74940 74953 CATCAGCAAGAGGC 2-10-2MOE 1011
398104 74951 74964 CAAGAAGACCTTAC 2-10-2MOE 1065
398106 74974 74987 TGGAAAACTGCACC 2-10-2MOE 1068
398107 74980 74993 TATTCCTGGAAAAC 2-10-2MOE 902
147745 75030 75041 TTGACCAGGAAG 1-10-1MOE 1058
147737 75039 75050 ACAGCCAGGTAG 1-10-1MOE 1067
398105 75040 75053 TGCACAGGCAGGTT 2-10-2MOE 1066
147737 75065 75076 ACAGCCAGGTAG 1-10-1MOE 1067
398108 75077 75090 GGAATGTCTGAGTT 2-10-2MOE 1136
398095 75086 75099 CATCAGCAAGAGGC 2-10-2MOE 1011
147691 75108 75119 GAGGTGGGAAAA 1-10-1MOE 966
398106 75120 75133 TGGAAAACTGCACC 2-10-2MOE 1068
398107 75126 75139 TATTCCTGGAAAAC 2-10-2MOE 902
147738 75155 75166 TGGGTGGCCGGG 1-10-1MOE 1069
147745 75176 75187 TTGACCAGGAAG 1-10-1MOE 1058
398108 75223 75236 GGAATGTCTGAGTT 2-10-2MOE 1136
398109 75247 75260 CAAGAAGTGTGGTT 2-10-2MOE 903
147691 75254 75265 GAGGTGGGAAAA 1-10-1MOE 966
147738 75301 75312 TGGGTGGCCGGG 1-10-1MOE 1069
398110 75385 75398 GTTCCCTTTGCAGG 2-10-2MOE 952
147091 75387 75398 GTTCCCTCTACA 1-10-1MOE 1004
398109 75393 75406 CAAGAAGTGTGGTT 2-10-2MOE 903
398111 75470 75483 GTGAAAATGCTGGC 2-10-2MOE 904
401385 75494 75507 CCCAGTGGGTTTGA 2-10-2MOE 890
398166 75499 75510 GGGCTTCTTCCA 1-10-1MOE 1070
147091 75525 75536 GTTCCCTCTACA 1-10-1MOE 1004
147092 75526 75537 TGTTCCCTCTAC 1-10-1MOE 901
398110 75531 75544 GTTCCCTTTGCAGG 2-10-2MOE 952
147091 75533 75544 GTTCCCTCTACA 1-10-1MOE 1004
147706 75540 75551 GCTGA CATCTCG 1-10-1MOE 1071
398112 75584 75597 CAGCCTGGCACCTA 2-10-2MOE 1072
398111 75616 75629 GTGAAAATGCTGGC 2-10-2MOE 904
147746 75617 75628 TAAAAACAACAA 1-10-1MOE 1073
398166 75645 75656 GGGCTTCTTCCA 1-10-1MOE 1070
147091 75671 75682 GTTCCCTCTACA 1-10-1MOE 1004
147092 75672 75683 TGTTCCCTCTAC 1-10-1MOE 901
398113 75693 75706 AGGAGGTTAAACCA 2-10-2MOE 905
398112 75730 75743 CAGCCTGGCACCTA 2-10-2MOE 1072
147746 75763 75774 TAAAAACAACAA 1-10-1MOE 1073
398114 75770 75783 AGGCATATAGCAGA 2-10-2MOE 1075
398115 75786 75799 AGTAAATATTGGCT 2-10-2MOE 1076
398116 75799 75812 TAATGACCTGATGA 2-10-2MOE 1137
398113 75839 75852 AGGAGGTTAAACCA 2-10-2MOE 905
390030 75839 75850 TTTATAAAACTG 1-10-1MOE 1074
398115 75932 75945 AGTAAATATTGGCT 2-10-2MOE 1076
398116 75945 75958 TAATGACCTGATGA 2-10-2MOE 1137
398106 75982 75995 TGGAAAACTGCACC 2-10-2MOE 1068
390030 75985 75996 TTTATAAAACTG 1-10-1MOE 1074
398106 76127 76140 TGGAAAACTGCACC 2-10-2MOE 1068
147690 76196 76207 TGAAGTTAATTC 1-10-1MOE 1138
147690 76341 76352 TGAAGTTAATTC 1-10-1MOE 1138
147724 76740 76751 GAAATTGAGGAA 1-10-1MOE 1139
147089 76873 76884 TCCCTCTACACC 1-10-1MOE 956
147679 76881 76892 CAAAAGGATCCC 1-10-1MOE 907
147724 76885 76896 GAAATTGAGGAA 1-10-1MOE 1139
147089 77018 77029 TCCCTCTACACC 1-10-1MOE 956
147679 77026 77037 CAAAAGGATCCC 1-10-1MOE 907
147693 77240 77251 GTGCGCTCCCAT 1-10-1MOE 1078
147697 77759 77770 CCCCAGCAGCGG 1-10-1MOE 1000
In certain embodiments, the target zone is the nucleotide 177-190 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 177-190 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 177-190 comprises the nucleotide sequence that is selected from SEQ ID NO 886,859 or 853.In some this embodiment, the short antisense compounds of the nucleotide 177-190 of targeting SEQ ID NO:11 is selected from Isis No 147022,147023 or 147024.
In certain embodiments, the target zone is the nucleotide 195-228 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 195-228 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 195-228 comprises the nucleotide sequence that is selected from SEQ ID NO 877,868,882,886,859,853,865,835,843,846,842,848,874,849,863,855,850,864 or 834.In some this embodiment, the short antisense compounds of the nucleotide 195-228 of targeting SEQ ID NO:11 is selected from Isis No 147019,147020,147021,147022,147023,147024,147025,147026,147027,147028,147073,147029,147030,147036,147037,147038,147039,147040 or 147041.
In certain embodiments, the target zone is the nucleotide 323-353 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 323-353 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 323-353 comprises the nucleotide sequence that is selected from SEQ ID NO 866,881,869,883,858,833,875,837,829,871,884,887,839,830,840,861 or 879.In some this embodiment, the short antisense compounds of the nucleotide 323-353 of targeting SEQ ID NO:11 is selected from Isis No 147042,147043,147044,147045,147046,147047,147051,147052,147053,147054,147055,147056,147057,147058,147059,147060 or 147061.
In certain embodiments, the target zone is the nucleotide 322-353 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 177-190 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 322-353 comprises the nucleotide sequence that is selected from SEQ ID NO 842,866,881,869,883,858,833,875,837,829,871,884,887,839,830,840,861 or 879.In some this embodiment, the short antisense compounds of the nucleotide 322-353 of targeting SEQ ID NO:11 is selected from Isis No 147073,147042,147043,147044,147045,147046,147047,147051,147052,147053,147054,147055,147056,147057,147058,147059,147060 or 147061.
In certain embodiments, the target zone is the nucleotide 679-799 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 679-799 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 679-799 comprises the nucleotide sequence that is selected from SEQ ID NO 883,858,883 or 858.In some this embodiment, the short antisense compounds of the nucleotide 679-799 of targeting SEQ IDNO:11 is selected from Isis No 147045,147046,147045 or 147046.
In certain embodiments, the target zone is the nucleotide 679-827 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 679-827 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 679-827 comprises the nucleotide sequence that is selected from SEQ ID NO 883,858,883,858 or 851.In some this embodiment, the short antisense compounds of the nucleotide 679-827 of targeting SEQ ID NO:11 is selected from Isis No 147045,147046,147045,147046 or 147066.
In certain embodiments, the target zone is the nucleotide 1024-1046 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 1024-1046 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 1024-1046 comprises the nucleotide sequence that is selected from SEQ ID NO 841,862,880,857,851,876,838,860,878,856,832 or 842.In some this embodiment, the short antisense compounds of the nucleotide 1024-1046 of targeting SEQ ID NO:11 is selected from Isis No 147062,147063,147064,147065,147066,147067,147068,147069,147070,147071,147072 or 147073.
In certain embodiments, the target zone is the nucleotide 992-1046 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 992-1046 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 992-1046 comprises the nucleotide sequence that is selected from SEQ ID NO 831,841,862,880,857,851,876,838,860,878,856,832 or 842.In some this embodiment, the short antisense compounds of the nucleotide 992-1046 of targeting SEQ ID NO:11 is selected from Isis No 404131,147062,147063,147064,147065,147066,147067,147068,147069,147070,147071,147072 or 147073.
In certain embodiments, the target zone is the nucleotide 1868-1881 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 1868-1881 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 1868-1881 comprises the nucleotide sequence that is selected from SEQ ID NO 886,859 or 853.In some this embodiment, the short antisense compounds of the nucleotide 1868-1881 of targeting SEQ ID NO:11 is selected from Isis No 147022,147023 or 147024.
In certain embodiments, the target zone is the nucleotide 1886-1919 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 1886-1919 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 1886-1919 comprises the nucleotide sequence that is selected from SEQ ID NO 877,868,882,886,859,865,843,846,874,863,855,864 or 834.In some this embodiment, the short antisense compounds of the nucleotide 1886-1919 of targeting SEQ ID NO:11 is selected from Isis No 147019,147020,147021,147022,147023,147025,147027,147028,147030,147037,147038,147040 or 147041.
In certain embodiments, the target zone is the nucleotide 1869-1919 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 1869-1919 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 1869-1919 comprises the nucleotide sequence that is selected from SEQ ID NO 859,853,877,868,882,886,859,865,843,846,874,863,855,864 or 834.In some this embodiment, the short antisense compounds of the nucleotide 1869-1919 of targeting SEQ ID NO:11 is selected from Isis No 147023,147024,147019,147020,147021,147022,147023,147025,147027,147028,147030,147037,147038,147040 or 147041.
In certain embodiments, the target zone is the nucleotide 1976-1989 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 1976-1989 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 1976-1989 comprises the nucleotide sequence that is selected from SEQ ID NO 886,859 or 853.In some this embodiment, the short antisense compounds of the nucleotide 1976-1989 of targeting SEQ ID NO:11 is selected from Isis No 147022,147023 or 147024.
In certain embodiments, the target zone is the nucleotide 1995-2027 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 1995-2027 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 1995-2027 comprises the nucleotide sequence that is selected from SEQ ID NO 868,882,886,859,853,865,835,843,846,848,874,849,863,855,850,864 or 834.In some this embodiment, the short antisense compounds of the nucleotide 1995-2027 of targeting SEQ ID NO:11 is selected from Isis No 147020,147021,147022,147023,147024,147025,147026,147027,147028,147029,147030,147036,147037,147038,147039,147040 or 147041.
In certain embodiments, the target zone is the nucleotide 2366-2382 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 2366-2382 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 2366-2382 comprises the nucleotide sequence that is selected from SEQ ID NO 867 or 873.In some this embodiment, the short antisense compounds of the nucleotide 2366-2382 of targeting SEQ ID NO:11 is selected from Isis No 404199 or 404134.
In certain embodiments, the target zone is the nucleotide 6220-6233 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 6220-6233 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 6220-6233 comprises the nucleotide sequence that is selected from SEQ ID NO 870,836 or 844.In some this embodiment, the short antisense compounds of the nucleotide 6220-6233 of targeting SEQ ID NO:11 is selected from Isis No 147032,147033 or 147034.
In certain embodiments, the target zone is the nucleotide 6288-6300 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 6288-6300 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 6288-6300 comprises the nucleotide sequence that is selected from SEQ ID NO 869 or 883.In some this embodiment, the short antisense compounds of the nucleotide 6288-6300 of targeting SEQ ID NO:11 is selected from Isis No 147044 or 147045.
In certain embodiments, the target zone is the nucleotide 6329-6342 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 6329-6342 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 6329-6342 comprises the nucleotide sequence that is selected from SEQ ID NO 870,836 or 844.In some this embodiment, the short antisense compounds of the nucleotide 6329-6342 of targeting SEQ ID NO:11 is selected from Isis No 147032,147033 or 147034.
In certain embodiments, the target zone is the nucleotide 6397-6409 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 6397-6409 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 6397-6409 comprises the nucleotide sequence that is selected from SEQ ID NO 869 or 883.In some this embodiment, the short antisense compounds of the nucleotide 6397-6409 of targeting SEQ ID NO:11 is selected from Isis No 147044 or 147045.
In certain embodiments, the target zone is the nucleotide 7057-7178 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 7057-7178 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 7057-7178 comprises the nucleotide sequence that is selected from SEQ ID NO 830,840,861,830 or 840.In some this embodiment, the short antisense compounds of the nucleotide 7057-7178 of targeting SEQ ID NO:11 is selected from Isis No 147058,147059,147060,147058 or 147059.
In certain embodiments, the target zone is the nucleotide 8630-8750 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 8630-8750 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 8630-8750 comprises the nucleotide sequence that is selected from SEQ ID NO 843,846,843 or 846.In some this embodiment, the short antisense compounds of the nucleotide 8630-8750 of targeting SEQ ID NO:11 is selected from Isis No 147027,147028,147027 or 147028.
In certain embodiments, the target zone is the nucleotide 10957-11077 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 10957-11077 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 10957-11077 comprises the nucleotide sequence that is selected from SEQ ID NO 881,869,881 or 869.In some this embodiment, the short antisense compounds of the nucleotide 10957-11077 of targeting SEQ ID NO:11 is selected from Isis No 147043,147044,147043 or 147044.
In certain embodiments, the target zone is the nucleotide 11605-11623 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 11605-11623 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 11605-11623 comprises the nucleotide sequence that is selected from SEQ ID NO 856,878 or 856.In some this embodiment, the short antisense compounds of the nucleotide 11605-11623 of targeting SEQ ID NO:11 is selected from Isis No 147071,147070 or 147071.
In certain embodiments, the target zone is the nucleotide 12805-12817 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 12805-12817 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 12805-12817 comprises the nucleotide sequence that is selected from SEQ ID NO 874 or 885.In some this embodiment, the short antisense compounds of the nucleotide 12805-12817 of targeting SEQ ID NO:11 is selected from Isis No 147030 or 147031.
In certain embodiments, the target zone is the nucleotide 12986-12998 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 12986-12998 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 12986-12998 comprises the nucleotide sequence that is selected from SEQ ID NO 874 or 885.In some this embodiment, the short antisense compounds of the nucleotide 12986-12998 of targeting SEQ ID NO:11 is selected from Isis No 147030 or 147031.
In certain embodiments, the target zone is the nucleotide 15560-15572 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 15560-15572 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 15560-15572 comprises the nucleotide sequence that is selected from SEQ ID NO 876 or 838.In some this embodiment, the short antisense compounds of the nucleotide 15560-15572 of targeting SEQ ID NO:11 is selected from Isis No 147067 or 147068.
In certain embodiments, the target zone is the nucleotide 17787-17941 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 17787-17941 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 17787-17941 comprises the nucleotide sequence that is selected from SEQ ID NO 874 or 880.In some this embodiment, the short antisense compounds of the nucleotide 17787-17941 of targeting SEQ ID NO:11 is selected from Isis No 147030 or 147064.
In certain embodiments, the target zone is the nucleotide 21190-21202 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 21190-21202 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 21190-21202 comprises the nucleotide sequence that is selected from SEQ ID NO 843 or 846.In some this embodiment, the short antisense compounds of the nucleotide 21190-21202 of targeting SEQ ID NO:11 is selected from Isis No 147027 or 147028.
In certain embodiments, the target zone is the nucleotide 21358-21370 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 21358-21370 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 21358-21370 comprises the nucleotide sequence that is selected from SEQ ID NO 843 or 846.In some this embodiment, the short antisense compounds of the nucleotide 21358-21370 of targeting SEQ ID NO:11 is selected from Isis No 017027 or 147028.
In certain embodiments, the target zone is the nucleotide 24318-24332 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 24318-24332 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 24318-24332 comprises the nucleotide sequence that is selected from SEQ ID NO 881,869,883 or 858.In some this embodiment, the short antisense compounds of the nucleotide 24318-24332 of targeting SEQ ID NO:11 is selected from Isis No 147043,147044,147045 or 147046.
In certain embodiments, the target zone is the nucleotide 24486-24501 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 24486-24501 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 24486-24501 comprises the nucleotide sequence that is selected from SEQ ID NO 881,869,858 or 833.In some this embodiment, the short antisense compounds of the nucleotide 24486-24501 of targeting SEQ ID NO:11 is selected from Isis No 147043,147044,147046 or 147047.
In certain embodiments, the target zone is the nucleotide 25065-25077 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 25065-25077 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 25065-25077 comprises the nucleotide sequence that is selected from SEQ ID NO 864 or 834.In some this embodiment, the short antisense compounds of the nucleotide 25065-25077 of targeting SEQ ID NO:11 is selected from Isis No 147040 or 147041.
In certain embodiments, the target zone is the nucleotide 25232-25245 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 25232-25245 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 25232-25245 comprises the nucleotide sequence that is selected from SEQ ID NO 850,864 or 834.In some this embodiment, the short antisense compounds of the nucleotide 25232-25245 of targeting SEQ ID NO:11 is selected from Isis No 147039,147040 or 147041.
In certain embodiments, the target zone is the nucleotide 25508-25523 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 25508-25523 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 25508-25523 comprises the nucleotide sequence that is selected from SEQ ID NO 839 or 879.In some this embodiment, the short antisense compounds of the nucleotide 25508-25523 of targeting SEQ ID NO:11 is selected from Isis No 147057 or 147061.
In certain embodiments, the target zone is the nucleotide 25676-28890 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 25676-28890 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 25676-28890 comprises the nucleotide sequence that is selected from SEQ ID NO 839,860 or 878.In some this embodiment, the short antisense compounds of the nucleotide 25676-28890 of targeting SEQ ID NO:11 is selected from Isis No 147057,147069 or 147070.
In certain embodiments, the target zone is the nucleotide 33056-33069 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 33056-33069 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 33056-33069 comprises the nucleotide sequence that is selected from SEQ ID NO 860,878 or 856.In some this embodiment, the short antisense compounds of the nucleotide 33056-33069 of targeting SEQ ID NO:11 is selected from Isis No 147069,147070 or 147071.
In certain embodiments, the target zone is the nucleotide 33205-33217 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 33205-33217 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 33205-33217 comprises the nucleotide sequence that is selected from SEQ ID NO 878 or 856.In some this embodiment, the short antisense compounds of the nucleotide 33205-33217 of targeting SEQ ID NO:11 is selected from Isis No 14707 or 147071.
In certain embodiments, the target zone is the nucleotide 33318-33334 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 33318-33334 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 33318-33334 comprises the nucleotide sequence that is selected from SEQ ID NO 858,854 or 875.In some this embodiment, the short antisense compounds of the nucleotide 33318-33334 of targeting SEQ ID NO:11 is selected from Isis No 147046,147049 or 147051.
In certain embodiments, the target zone is the nucleotide 33466-33482 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 33466-33482 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 33466-33482 comprises the nucleotide sequence that is selected from SEQ ID NO 858,833 or 875.In some this embodiment, the short antisense compounds of the nucleotide 33466-33482 of targeting SEQ ID NO:11 is selected from Isis No 147046,147047 or 147051.
In certain embodiments, the target zone is the nucleotide 33640-33656 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 33640-33656 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 33640-33656 comprises the nucleotide sequence that is selected from SEQ ID NO 858 or 875.In some this embodiment, the short antisense compounds of the nucleotide 33640-33656 of targeting SEQ ID NO:11 is selected from Isis No 147046 or 147051.
In certain embodiments, the target zone is the nucleotide 33788-33804 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 33788-33804 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 33788-33804 comprises the nucleotide sequence that is selected from SEQ ID NO 858 or 875.In some this embodiment, the short antisense compounds of the nucleotide 33788-33804 of targeting SEQ ID NO:11 is selected from Isis No 147046 or 147051.
In certain embodiments, the target zone is the nucleotide 35437-35449 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 35437-35449 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 35437-35449 comprises the nucleotide sequence that is selected from SEQ ID NO 840 or 861.In some this embodiment, the short antisense compounds of the nucleotide 35437-35449 of targeting SEQ ID NO:11 is selected from Isis No 147059 or 147060.
In certain embodiments, the target zone is the nucleotide 40353-40373 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 40353-40373 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 40353-40373 comprises the nucleotide sequence that is selected from SEQ ID NO 879 or 881.In some this embodiment, the short antisense compounds of the nucleotide 40353-40373 of targeting SEQ ID NO:11 is selected from Isis No 147061 or 147043.
In certain embodiments, the target zone is the nucleotide 42527-42541 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 42527-42541 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 42527-42541 comprises the nucleotide sequence that is selected from SEQ ID NO 885,870 or 844.In some this embodiment, the short antisense compounds of the nucleotide 42527-42541 of targeting SEQ ID NO:11 is selected from Isis No 147031,147032 or 147034.
In certain embodiments, the target zone is the nucleotide 42675-42689 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 42675-42689 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 42675-42689 comprises the nucleotide sequence that is selected from SEQ ID NO 885,870,836 or 844.In some this embodiment, the short antisense compounds of the nucleotide 42675-42689 of targeting SEQ ID NO:11 is selected from Isis No 147031,147032,147033 or 147034.
In certain embodiments, the target zone is the nucleotide 46313-46328 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 46313-46328 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 46313-46328 comprises the nucleotide sequence that is selected from SEQ ID NO 839,830,840 or 879.In some this embodiment, the short antisense compounds of the nucleotide 46313-46328 of targeting SEQ ID NO:11 is selected from Isis No 147057,147058,147059 or 147061.
In certain embodiments, the target zone is the nucleotide 46461-46476 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 46461-46476 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 46461-46476 comprises the nucleotide sequence that is selected from SEQ ID NO 839,840 or 879.In some this embodiment, the short antisense compounds of the nucleotide 46461-46476 of targeting SEQ ID NO:11 is selected from Isis No 147057,147059 or 147061.
In certain embodiments, the target zone is the nucleotide 48369-48381 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 48369-48381 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 48369-48381 comprises the nucleotide sequence that is selected from SEQ ID NO 842 or 845.In some this embodiment, the short antisense compounds of the nucleotide 48369-48381 of targeting SEQ ID NO:11 is selected from Isis No 147073 or 147074.
In certain embodiments, the target zone is the nucleotide 48714-48726 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 48714-48726 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 48714-48726 comprises the nucleotide sequence that is selected from SEQ ID NO 843 or 846.In some this embodiment, the short antisense compounds of the nucleotide 48714-48726 of targeting SEQ ID NO:11 is selected from Isis No 147027 or 147028.
In certain embodiments, the target zone is the nucleotide 49050-49062 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 49050-49062 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 49050-49062 comprises the nucleotide sequence that is selected from SEQ ID NO 876 or 838.In some this embodiment, the short antisense compounds of the nucleotide 49050-49062 of targeting SEQ ID NO:11 is selected from Isis No 147067 or 147068.
In certain embodiments, the target zone is the nucleotide 49672-49684 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 49672-49684 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 49672-49684 comprises the nucleotide sequence that is selected from SEQ ID NO 842 or 845.In some this embodiment, the short antisense compounds of the nucleotide 49672-49684 of targeting SEQ ID NO:11 is selected from Isis No 147073 or 147074.
In certain embodiments, the target zone is the nucleotide 52292-52304 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 52292-52304 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 52292-52304 comprises the nucleotide sequence that is selected from SEQ ID NO 849 or 863.In some this embodiment, the short antisense compounds of the nucleotide 52292-52304 of targeting SEQ ID NO:11 is selected from Isis No 147036 or 147037.
In certain embodiments, the target zone is the nucleotide 52438-52450 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 52438-52450 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 52438-52450 comprises the nucleotide sequence that is selected from SEQ ID NO 849 or 863.In some this embodiment, the short antisense compounds of the nucleotide 52438-52450 of targeting SEQ ID NO:11 is selected from Isis No 147036 or 147037.
In certain embodiments, the target zone is the nucleotide 53445-53458 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 53445-53458 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 53445-53458 comprises the nucleotide sequence that is selected from SEQ ID NO 866,881 or 869.In some this embodiment, the short antisense compounds of the nucleotide 53445-53458 of targeting SEQ ID NO:11 is selected from Isis No 147042,147043 or 147044.
In certain embodiments, the target zone is the nucleotide 53591-53604 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 53591-53604 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 53591-53604 comprises the nucleotide sequence that is selected from SEQ ID NO 866,874,881,885 or 869.In some this embodiment, the short antisense compounds of the nucleotide 53591-53604 of targeting SEQ ID NO:11 is selected from Isis No 147042,147030,147043,147031 or 147044.
In certain embodiments, the target zone is the nucleotide 53738-53750 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 53738-53750 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 53738-53750 comprises the nucleotide sequence that is selected from SEQ ID NO 874 or 885.In some this embodiment, the short antisense compounds of the nucleotide 53738-53750 of targeting SEQ ID NO:11 is selected from Isis No 147030 or 147031.
In certain embodiments, the target zone is the nucleotide 53783-53795 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 53783-53795 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 53783-53795 comprises the nucleotide sequence that is selected from SEQ ID NO 864 or 834.In some this embodiment, the short antisense compounds of the nucleotide 53783-53795 of targeting SEQ ID NO:11 is selected from Isis No 147040 or 147041.
In certain embodiments, the target zone is the nucleotide 55008-55020 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 55008-55020 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 55008-55020 comprises the nucleotide sequence that is selected from SEQ ID NO 866 or 881.In some this embodiment, the short antisense compounds of the nucleotide 55008-55020 of targeting SEQ ID NO:11 is selected from Isis No 147042 or 147043.
In certain embodiments, the target zone is the nucleotide 55154-55166 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 55154-55166 of antisense compounds targeting SEQ ID NO:11.In some this embodiment, the short antisense compounds of targeted nucleotide 55154-55166 comprises the nucleotide sequence that is selected from SEQ ID NO 866 or 881.In some this embodiment, the short antisense compounds of the nucleotide 55154-55166 of targeting SEQ ID NO:11 is selected from Isis No 147042 or 147043.
In certain embodiments, the target zone is the nucleotide 55682-55695 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 55682-55695 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 55682-55695 comprises the nucleotide sequence that is selected from SEQ ID NO 877 or 882.In some this embodiment, the short antisense compounds of the nucleotide 55682-55695 of targeting SEQ ID NO:11 is selected from Isis No 147019 or 147021.
In certain embodiments, the target zone is the nucleotide 56275-56293 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 56275-56293 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 56275-56293 comprises the nucleotide sequence that is selected from SEQ ID NO 871,884,887,830,840,861 or 879.In some this embodiment, the short antisense compounds of the nucleotide 56275-56293 of targeting SEQ ID NO:11 is selected from Isis No 147054,147055,147056,147058,147059,147060 or 147061.
In certain embodiments, the target zone is the nucleotide 56418-56439 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 56418-56439 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 56418-56439 comprises the nucleotide sequence that is selected from SEQ ID NO 875,829,871,884,887,839,830 or 879.In some this embodiment, the short antisense compounds of the nucleotide 56418-56439 of targeting SEQ ID NO:11 is selected from Isis No 147051,147053,147054,147055,147056,147057,147058 or 147061.
In certain embodiments, the target zone is the nucleotide 57264-57276 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 57264-57276 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 57264-57276 comprises the nucleotide sequence that is selected from SEQ ID NO 883 or 858.In some this embodiment, the short antisense compounds of the nucleotide 57264-57276 of targeting SEQ ID NO:11 is selected from Isis No 147045 or 147046.
In certain embodiments, the target zone is the nucleotide 61276-61293 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 61276-61293 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 61276-61293 comprises the nucleotide sequence that is selected from SEQ ID NO 856,847,849,863,855,850 or 864.In some this embodiment, the short antisense compounds of the nucleotide 61276-61293 of targeting SEQ ID NO:11 is selected from Isis No 147071,147035,147036,147037,147038,147039 or 147040.
In certain embodiments, the target zone is the nucleotide 61257-61320 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 61257-61320 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 61257-61320 comprises the nucleotide sequence that is selected from SEQ ID NO 881,856,847,849,863,855,850,864 or 886.In some this embodiment, the short antisense compounds of the nucleotide 61257-61320 of targeting SEQ IDNO:11 is selected from Isis No 147043,147071,147035,147036,147037,147038,147039,147040 or 147071.
In certain embodiments, the target zone is the nucleotide 61422-61439 of SEQ ID NO:11.11. lack in certain embodiments, the nucleotide 61422-61439 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 61422-61439 comprises the nucleotide sequence that is selected from SEQ ID NO 844,847,849,863,855 or 864.In some this embodiment, the short antisense compounds of the nucleotide 61422-61439 of targeting SEQ IDNO:11 is selected from Isis No 147034,147035,147036,147037,147038 or 147040.
In certain embodiments, the target zone is the nucleotide 61422-61466 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 61422-61466 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 61422-61466 comprises the nucleotide sequence that is selected from SEQ ID NO 844,847,849,863,855,864 or 856.In some this embodiment, the short antisense compounds of the nucleotide 61422-61466 of targeting SEQ ID NO:11 is selected from Isis No 147034,147035,147036,147037,147038,147040 or 147071.
In certain embodiments, the target zone is the nucleotide 63065-63078 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 63065-63078 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 63065-63078 comprises the nucleotide sequence that is selected from SEQ ID NO 851 or 838.In some this embodiment, the short antisense compounds of the nucleotide 63065-63078 of targeting SEQ ID NO:11 is selected from Isis No 147066 or 147068.
In certain embodiments, the target zone is the nucleotide 63207-63222 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 63207-63222 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 63207-63222 comprises the nucleotide sequence that is selected from SEQ ID NO 841 or 851.In some this embodiment, the short antisense compounds of the nucleotide 63207-63222 of targeting SEQ ID NO:11 is selected from Isis No 147062 or 147066.
In certain embodiments, the target zone is the nucleotide 64538-64550 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 64538-64550 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 64538-64550 comprises the nucleotide sequence that is selected from SEQ ID NO 849 or 863.In some this embodiment, the short antisense compounds of the nucleotide 64538-64550 of targeting SEQ ID NO:11 is selected from Isis No 147036 or 147037.
In certain embodiments, the target zone is the nucleotide 64864-64876 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 64864-64876 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 64864-64876 comprises the nucleotide sequence that is selected from SEQ ID NO 851 or 876.In some this embodiment, the short antisense compounds of the nucleotide 64864-64876 of targeting SEQ ID NO:11 is selected from Isis No 147066 or 147067.
In certain embodiments, the target zone is the nucleotide 65010-65028 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 65010-65028 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 65010-65028 comprises the nucleotide sequence that is selected from SEQ ID NO 851,876 or 883.In some this embodiment, the short antisense compounds of the nucleotide 65010-65028 of targeting SEQ ID NO:11 is selected from Isis No 147066,147067 or 147045.
In certain embodiments, the target zone is the nucleotide 65163-65175 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 65163-65175 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 65163-65175 comprises the nucleotide sequence that is selected from SEQ ID NO 883 or 858.In some this embodiment, the short antisense compounds of the nucleotide 65163-65175 of targeting SEQ ID NO:11 is selected from Isis No 147045 or 147046.
In certain embodiments, the target zone is the nucleotide 65408-65422 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 65408-65422 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 65408-65422 comprises the nucleotide sequence that is selected from SEQ ID NO 883 or 856.In some this embodiment, the short antisense compounds of the nucleotide 65408-65422 of targeting SEQ ID NO:11 is selected from Isis No 147068 or 147071.
In certain embodiments, the target zone is the nucleotide 65549-65568 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 65549-65568 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 65549-65568 comprises the nucleotide sequence that is selected from SEQ ID NO 860,838 or 856.In some this embodiment, the short antisense compounds of the nucleotide 65549-65568 of targeting SEQ ID NO:11 is selected from Isis No 147069,147068 or 147071.
In certain embodiments, the target zone is the nucleotide 67741-67754 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 67741-67754 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 67741-67754 comprises the nucleotide sequence that is selected from SEQ ID NO 848,874 or 885.In some this embodiment, the short antisense compounds of the nucleotide 67741-67754 of targeting SEQ ID NO:11 is selected from Isis No 147029,147030 or 147031.
In certain embodiments, the target zone is the nucleotide 67886-67900 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 67886-67900 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 67886-67900 comprises the nucleotide sequence that is selected from SEQ ID NO 846,848,874 or 885.In some this embodiment, the short antisense compounds of the nucleotide 67886-67900 of targeting SEQ ID NO:11 is selected from Isis No 147028,147029,147030 or 147031.
In certain embodiments, the target zone is the nucleotide 68867-68880 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 68867-68880 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 68867-68880 comprises the nucleotide sequence that is selected from SEQ ID NO 881,869 or 883.In some this embodiment, the short antisense compounds of the nucleotide 68867-68880 of targeting SEQ ID NO:11 is selected from Isis No 147043,147044 or 147045.
In certain embodiments, the target zone is the nucleotide 69013-69532 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 69013-69532 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 69013-69532 comprises the nucleotide sequence that is selected from SEQ ID NO 881,869,883,858,856,832 or 842.In some this embodiment, the short antisense compounds of the nucleotide 69013-69532 of targeting SEQ ID NO:11 is selected from Isis No 147043,147044,147045,147046,147071,147072 or 147073.
In certain embodiments, the target zone is the nucleotide 69665-69880 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 69665-69880 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 69665-69880 comprises the nucleotide sequence that is selected from SEQ ID NO 856,832,842,845 or 851.In some this embodiment, the short antisense compounds of the nucleotide 69665-69880 of targeting SEQ ID NO:11 is selected from Isis No 147071,147072,147073,147074 or 147066.
In certain embodiments, the target zone is the nucleotide 70611-70630 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 70611-70630 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 70611-70630 comprises the nucleotide sequence that is selected from SEQ ID NO 859,841,862,880,857 or 851.In some this embodiment, the short antisense compounds of the nucleotide 70611-70630 of targeting SEQ ID NO:11 is selected from Isis No 147023,147062,147063,147064,147065 or 147066.
In certain embodiments, the target zone is the nucleotide 70762-70776 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 70762-70776 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 70762-70776 comprises the nucleotide sequence that is selected from SEQ ID NO 862,880,857 or 851.In some this embodiment, the short antisense compounds of the nucleotide 70762-70776 of targeting SEQ ID NO:11 is selected from Isis No 147063,147064,147065 or 147066.
In certain embodiments, the target zone is the nucleotide 70998-71010 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 70998-71010 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 70998-71010 comprises the nucleotide sequence that is selected from SEQ ID NO 832 or 842.In some this embodiment, the short antisense compounds of the nucleotide 70998-71010 of targeting SEQ ID NO:11 is selected from Isis No 147072 or 147073.
In certain embodiments, the target zone is the nucleotide 71144-714364 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 71144-714364 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 71144-714364 comprises the nucleotide sequence that is selected from SEQ ID NO 832,842,845,863,855 or 850.In some this embodiment, the short antisense compounds of the nucleotide 71144-714364 of targeting SEQ IDNO:11 is selected from Isis No 147072,147073,147074,147037,147038 or 147039.
In certain embodiments, the target zone is the nucleotide 71497-71652 of SEQ ID NO:11.In certain embodiments, lack the nucleotide 71497-71652 of antisense compounds targeting SEQ ID NO:11.In certain embodiments, the short antisense compounds of targeted nucleotide 71497-71652 comprises the nucleotide sequence that is selected from SEQ ID NO 863,855,850 or 879.In some this embodiment, the short antisense compounds of the nucleotide 71497-71652 of targeting SEQ ID NO:11 is selected from Isis No 147037,147038,147039 or 147061.
In certain embodiments, its length of short antisense compounds of targeting PTP1B nucleic acid is 8-16, preferred 9-15, more preferably 9-14, more preferably 10-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting PTP1B nucleic acid is 9-14 nucleotide.In certain embodiments, its length of short antisense compounds of targeting PTP1B nucleic acid is 10-14 nucleotide.In certain embodiments, this short antisense compounds is short antisense oligonucleotide.
In certain embodiments, the short antisense compounds of targeting PTP1B nucleic acid is short gapmer.In some this embodiment, comprise at least one high-affinity in the short gapmer of targeting PTP1B nucleic acid one or more pterions therein and modify.In certain embodiments, the short antisense compounds of targeting PTP1B nucleic acid comprises 1-3 high-affinity modification in each pterion.In some this embodiment, the nucleoside in pterion or nucleotide comprise 2 ' and modify.In some this embodiment, the monomer in pterion is BNA.In some this embodiment, the monomer in pterion is selected from α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA, β-D-methylene oxygen base (4 '-CH2-O-2 ') BNA, ethyleneoxy group (4 '-(CH2)2-O-2 ') BNA, amino oxygen base (4 '-CH2-O-N (R)-2 ') BNA and oxygen base amino (4 '-CH2-N (R)-O-2 ') BNA.In certain embodiments, the monomer in pterion comprises in 2 ' position and is selected from following substituent group: pi-allyl, amino, azido, thio group, O-pi-allyl, O-C1-C10Alkyl ,-OCF3, O-(CH2)2-O-CH3, 2 '-O (CH2)2SCH3, O-(CH2)2-O-N (Rm) (Rn) and O-CH2-C (=O)-N (Rm) (Rn), each R whereinmAnd RnIndependent is H or substituted or unsubstituted C1-C10Alkyl.In certain embodiments, the monomer in pterion is 2 ' MOE nucleotide.
In certain embodiments, the short antisense compounds of targeting PTP1B nucleic acid comprises between 5 ' pterion and 3 ' pterion at interval.In certain embodiments, comprise 5,6,7,8,9,10,11,12,13 or 14 monomers at interval.In certain embodiments, Jian Ge monomer is not modified deoxyribonucleotide.In certain embodiments, Jian Ge monomer is not modified ribonucleotide.In certain embodiments, modify (if any) at interval and cause producing such antisense compounds, when in conjunction with its target nucleic acids, this chemical compound can be supported the cutting of RNA enzyme (including but not limited to RNA enzyme H).
In certain embodiments, the short antisense compounds of targeting PTP1B nucleic acid has the same Dan Julian key.In some this embodiment, these keys all are that thiophosphate connects key.In certain embodiments, Lian Jian is that di-phosphate ester connects key.In certain embodiments, the short antisense compounds of targeting PTP1B nucleic acid has mixed matrix.
In certain embodiments, its length of short antisense compounds of targeting PTP1B nucleic acid is 8 monomers.In certain embodiments, its length of short antisense compounds of targeting PTP1B nucleic acid is 9 monomers.In certain embodiments, its length of short antisense compounds of targeting PTP1B nucleic acid is 10 monomers.In certain embodiments, its length of short antisense compounds of targeting PTP1B nucleic acid is 11 monomers.In certain embodiments, its length of short antisense compounds of targeting PTP1B nucleic acid is 12 monomers.In certain embodiments, its length of short antisense compounds of targeting PTP1B nucleic acid is 13 monomers.In certain embodiments, its length of short antisense compounds of targeting PTP1B nucleic acid is 14 monomers.In certain embodiments, its length of short antisense compounds of targeting PTP1B nucleic acid is 15 monomers.In certain embodiments, its length of short antisense compounds of targeting PTP1B nucleic acid is 16 monomers.In certain embodiments, the short antisense compounds of targeting PTP1B nucleic acid comprises 9-15 monomer.In certain embodiments, the short antisense compounds of targeting PTP1B nucleic acid comprises 10-15 monomer.In certain embodiments, the short antisense compounds of targeting PTP1B nucleic acid comprises 12-14 monomer.In certain embodiments, the short antisense compounds of targeting PTP1B nucleic acid comprises 12-14 nucleotide or nucleoside.
In certain embodiments, the invention provides the method for the expression of regulating PTP1B.In certain embodiments, this method comprises the short antisense compounds that uses one or more targeting PTP1B nucleic acid, and wherein the short antisense compounds of this targeting PTP1B nucleic acid is about 8 to about 16, preferably 9-15, more preferably 9-14, more preferably 10-14 monomer (promptly about 8 monomer to about 16 connections).Those of ordinary skills will appreciate that, this comprises the method that the short antisense compounds that uses one or more 8,9,10,11,12,13,14,15 or 16 monomeric targeting PTP1B nucleic acid is regulated the expression of PTP1B.
In certain embodiments, the method for adjusting PTP1B comprises that using length is the short antisense compounds of 8 monomeric targeting PTP1B nucleic acid.In certain embodiments, the method for adjusting PTP1B comprises that using length is the short antisense compounds of 9 monomeric targeting PTP1B nucleic acid.In certain embodiments, the method for adjusting PTP1B comprises that using length is the short antisense compounds of 10 monomeric targeting PTP1B nucleic acid.In certain embodiments, the method for adjusting PTP1B comprises that using length is the short antisense compounds of 11 monomeric targeting PTP1B nucleic acid.In certain embodiments, the method for adjusting PTP1B comprises that using length is the short antisense compounds of 12 monomeric targeting PTP1B nucleic acid.In certain embodiments, the method for adjusting PTP1B comprises that using length is the short antisense compounds of 13 monomeric targeting PTP1B nucleic acid.In certain embodiments, the method for adjusting PTP1B comprises that using length is the short antisense compounds of 14 monomeric targeting PTP1B nucleic acid.In certain embodiments, the method for adjusting PTP1B comprises that using length is the short antisense compounds of 15 monomeric targeting PTP1B nucleic acid.In certain embodiments, the method for adjusting PTP1B comprises that using length is the short antisense compounds of 16 monomeric targeting PTP1B nucleic acid.
In certain embodiments, the method for the expression of adjusting PTP1B comprises that use comprises the short antisense compounds of 9-15 monomeric targeting PTP1B nucleic acid.In certain embodiments, the method for the expression of adjusting PTP1B comprises that use comprises the short antisense compounds of 10-15 monomeric targeting PTP1B nucleic acid.In certain embodiments, the method for the expression of adjusting PTP1B comprises that use comprises the short antisense compounds of 12-14 monomeric targeting PTP1B nucleic acid.In certain embodiments, the method for the expression of adjusting PTP1B comprises the short antisense compounds that uses the targeting PTP1B nucleic acid that comprises 12-14 nucleotide or nucleoside.
10.PTEN
In certain embodiments, the invention provides the short antisense compounds of the nucleic acid of targeting coding PTEN.In certain embodiments, this chemical compound is used for regulate the PTEN expression of cell.In some this embodiment, give animal with the short antisense compounds of targeting PTEN nucleic acid.In certain embodiments, the short antisense compounds of targeting PTEN nucleic acid can be used for studying PTEN, is used to study some nuclease and/or is used to assess the antisense activity.In some this embodiment, the short antisense compounds of targeting PTEN nucleic acid can be used for assessing some die body and/or chemical modification.In certain embodiments, the short antisense compounds of targeting PTEN nucleic acid being given animal can cause measurable phenotype to change.
The short antisense compounds of targeting PTEN can have short antisense compounds characteristic or feature any or that multiple this paper summarized.In certain embodiments, the short antisense compounds of targeting PTP1B nucleic acid has and is selected from following die body (pterion-deoxidation interval-pterion): 1-12-1,1-1-10-2,2-10-1-1,3-10-3,2-10-3,2-10-2,1-10-1,1-10-2,3-8-3,2-8-2,1-8-1,3-6-3 or 1-6-1, more preferably 1-10-1,2-10-2,3-10-3 and 1-9-2.
The short antisense compounds of some targeting PTEN nucleic acid
In certain embodiments, lacking the antisense compounds targeting has
Figure A20078002541602741
The PTEN nucleic acid of the sequence of searching number No.NM_000314.4 (being incorporated herein) with SEQ ID NO:14.In certain embodiments, lacking the antisense compounds targeting has
Figure A20078002541602742
The PTEN nucleic acid of the sequence of the nucleotide 8063255-8167140 of the sequence of searching number No.NT_033890.3 (being incorporated herein) with SEQ ID NO:15.In some this embodiment, short antisense compounds and the SEQ ID NO:14 of targeting SEQ ID NO:14 have at least 90% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:14 of targeting SEQ ID NO:14 have at least 95% complementarity.In some this embodiment, the short antisense compounds of targeting SEQID NO:14 and SEQ ID NO:14 have 100% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:15 of targeting SEQ ID NO:15 have at least 90% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:15 of targeting SEQ ID NO:15 have at least 95% complementarity.In some this embodiment, short antisense compounds and the SEQ ID NO:15 of targeting SEQ ID NO:15 have 100% complementarity.
In certain embodiments, the short antisense compounds of targeting SEQ ID NO:14 comprises the nucleotide sequence that is selected from the nucleotide sequence that provides in table 20 and 21.In certain embodiments, the short antisense compounds of targeting SEQ ID NO:15 comprises the nucleotide sequence that is selected from the nucleotide sequence that provides in table 22 and 23.
Each nucleotide sequence that provides in the table 20,21,22 and 23 is independent of any to connecting the modification of key or nuclear base between sugar moieties, nucleoside.Thus, the short antisense compounds that comprises the nucleotide sequence that provides in the table 20,21,22 and 23 can comprise one or more to connecting the modification of key or nuclear base between sugar moieties, nucleoside independently.Isis number (Isis NO.) described antisense compounds represented the nuclear base sequence with one or more to connecting key between sugar moieties, nucleoside or examining the combination of the modification of base.
Table 20 has been enumerated the short antisense compounds that 100% complementarity is arranged with SEQ ID NO:14.Table 22 has been enumerated the short antisense compounds that 100% complementarity is arranged with SEQ ID NO:15.The file that is marked with " gapmer die body " is represented the pterion of each short antisense compounds-at interval-pterion die body.Spacer segment comprises 2 '-deoxyribonucleotide, and each nucleotide of each pterion section comprises the sugar through 2 '-modification.The concrete sugar through 2 '-modification is also represented in " gapmer die body " file.For example, " 2-10-2MOE " means the 2-10-2gapmer die body, and wherein the spacer segment both sides of 10 2 '-deoxyribonucleotides are connected to the pterion section of 2 nucleotide, and wherein the nucleotide of pterion section is 2 '-MOE nucleotide.Connecting key between nucleoside is thiophosphate.Short antisense compounds comprises the 5-methylcytidine that substitutes not modified cytosine, unless show " not modified cytosine " in the gapmer die body file, represented in this case cytosine is not modified cytosine.For example, " 5-mC is only in the interval " expression spacer segment has the 5-methylcytidine, and the pterion section has not modified cytosine.
Nucleotide and abbreviation thereof through 2 '-modification comprise: 2 '-O-methoxy ethyl (MOE); 2 '-O-methyl (OMe); 2 '-O-(2,2,3,3,3-five fluoropropyls) (PentaF); 2 '-O-[(2-methoxyl group) ethyl]-4 '-sulfo-(2 '-MOE-4 '-sulfo-); (R)-CMOE-BNA.Shown in table 20 and 22, the pterion can include 2 ' the substituent monomer that comprises above a type.For example, 1-2-10-2MOE/PentaF/MOE represents that a nucleotide of modifying through MOE connects the interval that two nucleotide of modifying through PentaF connect 10 deoxyribonucleotides again and connects two nucleotide of modifying through PentaF again.For example, 1-1-10-22 '-(butyl acetamido)-palmitamide methylene oxygen base BNA/ methylene oxygen base BNA represents that 5 '-least significant end nucleotide is 2 '-(butyl acetamide)-palmitamide, second nucleotide is methylene oxygen base BNA nucleotide, and 3 ' pterion is methylene oxygen base BNA.Unless otherwise, otherwise cytosine is a 5-methylcytosine, and connecting key between nucleoside is thiophosphate.
Table 20: the short antisense compounds of targeting SEQ ID NO:14
ISISNo5 ' target site3 ' target siteSequence (5 '-3 ')The Gapmer die body SEQID NO
390092 5530 5541 AGAATGAGACTT 1-10-1MOE 1514
390091 5435 5446 TGAGGCATTATC 1-10-1MOE 1522
390090 5346 5357 AGAGTATCTGAA 1-10-1MOE 1227
390088 5162 5173 CACATTAACAGT 1-10-1MOE 1511
390087 5126 5137 GTGGCAACCACA 1-10-1MOE 1501
390085 5031 5042 ATTTGATGCTGC 1-10-1MOE 1505
390084 4982 4993 CAAAGAATGGTG 1-10-1MOE 1215
390082 4910 4921 AGGACTTGGGAT 1-10-1MOE 1503
390080 4833 4844 TGCTGCA CATCC 1-10-1MOE 1150
392067 4832 4845 CTGCTGCACATCCACytosine in the 2-10-2 methylene oxygen base BNA interval is not modified 1510
390078 4714 4725 CTTTCAGTCATA 1-10-1MOE 1520
390077 4693 4704 GTCAAATTCTAT 1-10-1MOE 1252
390076 4599 4610 TTCCAATGACTA 1-10-1MOE 1506
390075 4576 4587 GTAAGCAAGGCT 1-10-1MOE #N/A
390074 4533 4544 ACCCTCATTCAG 1-10-1MOE 1513
390068 4191 4202 GTAAATCCTAAG 1-10-1MOE 1515
390064 4001 4012 ACCACAGCTAGT 1-10-1MOE 1498
390063 3977 3988 CACCAATAAGTT 1-10-1MOE 1219
390058 3828 3839 AGTAGTTGTACT 1-10-1MOE 1192
390056 3793 3804 GGGCATATCAAA 1-10-1MOE 1521
390054 3705 3716 AACACTGCACAT 1-10-1MOE 1493
390052 3623 3634 GACAATTTCTAC 1-10-1MOE 1492
390050 3503 3514 GTATTCAAGTAA 1-10-1MOE 1140
390049 3479 3490 GTTAATGACATT 1-10-1MOE 1491
390047 3428 3439 TGTGTAAGGTCA 1-10-1MOE 1490
390041 3175 3186 TTAGCACTGGCC 1-10-1MOE 1489
398076 3171 3182 CACTGGCCTTGA 1-10-1MOE 1488
398009 3170 3183 GCACTGGCCTTGAT 2-10-2MOE 1487
398075 3111 3122 AAATCATTGTCA 1-10-1MOE 1233
398008 3110 3123 TAAATCATTGTCAA 2-10-2MOE 1486
398074 2913 2924 GCACCAATATGC 1-10-1MOE 1248
398007 2912 2925 AGCACCAATATGCT 2-10-2MOE 1247
398073 2681 2692 TTAGCCAACTGC 1-10-1MOE 1485
398006 2680 2693 CTTAGCCAACTGCA 2-10-2MOE 1484
390033 2679 2690 AGCCAACTGCAA 1-10-1MOE 1483
398072 2671 2682 GCAAACTTATCT 1-10-1MOE 1482
398005 2670 2683 TGCAAACTTATCTG 2-10-2MOE 1481
390030 2534 2545 TTTATAAAACTG 1-10-1MOE 1074
398071 2533 2544 TTATAAAACTGG 1-10-1MOE 1480
398004 2532 2545 TTTATAAAACTGGA 2-10-2MOE 1479
390029 2510 2521 AAAGTGCCATCT 1-10-1MOE 1478
390028 2491 2502 TCCTAATTGAAT 1-10-1MOE 1477
398070 2481 2492 ATTTTAAATGTC 1-10-1MOE 1476
398003 2480 2493 AATTTTAAATGTCC 2-10-2MOE 1475
390027 2455 2466 AGGTATATACAT 1-10-1MOE 1206
398069 2451 2462 ATATACATGACA 1-10-1MOE 1474
398002 2450 2463 TATATACATGACAC 2-10-2MOE 1473
398068 2440 2451 ACAGCTACACAA 1-10-1MOE 1472
398001 2439 2452 CACAGCTACACAAC 2-10-2MOE 1471
390026 2438 2449 AGCTACACAACC 1-10-1MOE 1470
390025 2406 2417 GTGTCAAAACCC 1-10-1MOE 1211
398067 2405 2416 TGTCAAAACCCT 1-10-1MOE 1210
398000 2404 2417 GTGTCAAAACCCTG 2-10-2MOE 1469
398066 2372 2383 AGATTGGTCAGG 1-10-1MOE 1468
397999 2371 2384 AAGATTGGTCAGGA 2-10-2MOE 1467
398065 2349 2360 GTTCCTATAACT 1-10-1MOE 1466
397998 2348 2361 TGTTCCTATAACTG 2-10-2MOE 1465
398064 2331 2342 CTGACACAATGT 1-10-1MOE 1464
397997 2330 2343 TCTGACACAATGTC 2-10-2MOE 1463
398063 2321 2332 GTCCTATTGCCA 1-10-1MOE 1205
397996 2320 2333 TGTCCTATTGCCAT 2-10-2MOE 1462
390022 2286 2297 CAGTTTATTCAA 1-10-1MOE 1142
336221 2230 2243 TCAGACTTTTGTAA 3-8-3MOE 1461
336220 2224 2237 TTTTGTAATTTGTG 3-8-3MOE 1460
336219 2209 2222 ATGCTGATCTTCAT 3-8-3MOE 1459
390021 2203 2214 CTTCATCAAAAG 1-10-1MOE 1458
336218 2201 2214 CTTCATCAAAAGGT 3-8-3MOE 1457
389779 2201 2212 TCATCAAAAGGT 1-9-2MOE 1176
389979 2201 2212 TCATCAAAAGGT 1-10-1MOE 1176
397995 2200 2213 TTCATCAAAAGGTT 2-10-2MOE 1456
336217 2192 2205 AAGGTTCATTCTCT 3-8-3MOE 1455
390020 2183 2194 TCTGGATCAGAG 1-10-1MOE 1149
336216 2182 2195 CTCTGGATCAGAGT 3-8-3MOE 1454
336215 2169 2182 TCAGTGGTGTCAGA 3-8-3MOE 1453
398062 2166 2177 GGTGTCAGAATA 1-10-1MOE 1255
397994 2165 2178 TGGTGTCAGAATAT 2-10-2MOE 1452
390019 2163 2174 GTCAGAATATCT 1-10-1MOE 1173
336214 2157 2170 GAATATCTATAATG 3-8-3MOE 1573
398061 2151 2162 ATAATGATCAGG 1-10-1MOE 1451
397993 2150 2163 TATAATGATCAGGT 2-10-2MOE 1450
336213 2146 2159 ATGATCAGGTTCAT 3-8-3MOE 1449
389778 2144 2155 TCAGGTTCATTG 1-9-2MOE 1448
389978 2144 2155 TCAGGTTCATTG 1-10-1MOE 1448
398060 2137 2148 CATTGTCACTAA 1-10-1MOE 1447
336212 2136 2149 TCATTGTCACTAAC 3-8-3MOE 1446
397992 2136 2149 TCATTGTCACTAAC 2-10-2MOE 1446
336211 2112 2125 ACAGAAGTTGAACT 3-8-3MOE 1445
390017 2111 2122 GAAGTTGAACTG 1-10-1MOE 1444
398059 2108 2119 GTTGAACTGCTA 1-10-1MOE 1443
397991 2107 2120 AGTTGAACTGCTAG 2-10-2MOE 1442
336210 2104 2117 TGAACTGCTAGCCT 3-8-3MOE 1441
335340 2104 2118 TTGAACTGCTAGCCT 1-10-4MOE 1440
335339 2103 2117 TGAACTGCTAGCCTC 1-10-4MOE 1439
335338 2102 2116 GAACTGCTAGCCTCT 1-10-4MOE 1438
335337 2101 2115 AACTGCTAGCCTCTG 1-10-4MOE 1437
335336 2100 2114 ACTGCTAGCCTCTGG 1-10-4MOE 1436
390430 2099 2111 GCTAGCCTCTGGAThe 1-10-2MOE cytosine is not modified 1163
390431 2099 2111 GCTAGCCTCTGGAC is 9-(amino ethoxy) phenoxazine in the not modified pterion of 1-10-2MOE cytosine 1163
390432 2099 2111 GCTAGCCTCTGGA 1-10-2MOE 1163
390433 2099 2111 GCTAGCCTCTGGAThe not modified Nt6 of 1-10-2MOE cytosine is 9-(amino ethoxy) phenoxazine 1163
390434 2099 2111 GCTAGCCTCTGGA 1-10-2MOE 1163
The not modified Nt 7 of cytosine is 9-(amino ethoxy) phenoxazine
390435 2099 2111 GCTAGCCTCTGGAThe not modified Nt9 of 1-10-2MOE cytosine is 9-(amino ethoxy) phenoxazine 1163
335335 2099 2113 CTGCTAGCCTCTGGA 1-10-4MOE 1435
389777 2098 2109 TAGCCTCTGGAT 1-9-2MOE 1434
389954 2098 2109 TAGCCTCTGGAT 1-10-1MOE 1434
335334 2098 2112 TGCTAGCCTCTGGAT 1-10-4MOE 1433
331429 2097 2110 CTAGCCTCTGGATT 2-10-2MOE 1431
335349 2097 2110 CTAGCCTCTGGATT 2-10-2MOE 1431
335367 2097 2110 CTAGCCTCTGGATT2-10-2 methylene oxygen base BNA 1431
335378 2097 2110 CTAGCCTCTGGATT2-10-2 methylene oxygen base BNA 1431
392061 2097 2110 CTAGCCTCTGGATTCytosine in the 2-10-2 methylene oxygen base BNA interval is not modified 1431
383991 2097 2109 TAGCCTCTGGATT1-10-2 2 '-(acetylaminohydroxyphenylarsonic acid butyl-acetamido)-cholesterol/MOE 1432
383992 2097 2109 TAGCCTCTGGATT1-10-2 2 '-(acetylaminohydroxyphenylarsonic acid butyl-acetamido)-cholic acid/MOE 1432
386970 2097 2109 TAGCCTCTGGATT 1-10-2MOE 1432
390578 2097 2109 TAGCCTCTGGATTT in the not modified pterion of 1-10-2MOE cytosine is the 2-thio-thymine 1432
390614 2097 2109 TAGCCTCTGGATT 1-10-2PentaF 1432
335333 2097 2111 GCTAGCCTCTGGATT 1-10-4MOE 1430
386683 2097 2109 TAGCCTCTGGATT1-10-22 '-(butyl acetamido)-palmitamide/MOE 1432
371975 2096 2110 CTAGCCTCTGGATTT 3-10-2MOE 1429
335341 2096 2111 GCTAGCCTCTGGATTT 3-10-3MOE 1428
335350 2096 2111 GCTAGCCTCTGGATTT 3-10-3MOE 1428
335368 2096 2111 GCTAGCCTCTGGATTTConnect key for di-phosphate ester in the 3-10-3 methylene oxygen base BNA pterion 1428
335379 2096 2111 GCTAGCCTCTGGATTT3-10-3 methylene oxygen base BNA 1428
383739 2096 2111 GCTAGCCTCTGGATTT3-10-3MOE is a 5-methylcytosine in the interval 1428
384071 2096 2111 GCTAGCCTCTGGATTT 3-10-3OMe 1428
At interval is 5-methylcytosine
384073 2096 2111 GCTAGCCTCTGGATTT3-10-3 methylene oxygen base BNA is a 5-methylcytosine in the interval 1428
390576 2096 2111 GCTAGCCTCTGGATTT3-10-3MOE at interval in for the T in the 5-methylcytosine pterion be the 2-thio-thymine 1428
390580 2096 2111 GCTAGCCTCTGGATTTPyrimidine in the 3-10-3MOE pterion is that the cytosine in the 5-thiazole interval is not modified 1428
390581 2096 2111 GCTAGCCTCTGGATTTCytosine in the 3-10-3MOE interval is not modified 1428
391863 2096 2111 GCTAGCCTCTGGATTTThe 3-10-3MOE cytosine is not modified 1428
391864 2096 2111 GCTAGCCTCTGGATTTCytosine in the 3-10-3 methylene oxygen base BNA interval is not modified 1428
391865 2096 2111 GCTAGCCTCTGGATTT3-10-3 methylene oxygen base BNA cytosine is not modified 1428
375560 2096 2110 CTAGCCTCTGGATTT 2-10-3MOE 1429
391172 2096 2110 CTAGCCTCTGGATTTMethylene oxygen base BNA cytosine is not modified 1429
391175 2096 2110 CTAGCCTCTGGATTT2-10-3 methylene oxygen base BNA 1429
391449 2096 2110 CTAGCCTCTGGATTTThe 2-10-3MOE cytosine is not modified 1429
392054 2096 2110 CTAGCCTCTGGATTTCytosine in the 2-10-3 methylene oxygen base BNA interval is not modified 1429
392055 2096 2110 CTAGCCTCTGGATTTCytosine in the 2-10-3MOE interval is not modified 1429
362977 2096 2111 GCTAGCCTCTGGATTT 2-12-2MOE 1428
386770 2096 2109 TAGCCTCTGGATTT 1-11-2MOE 1427
390577 2096 2109 TAGCCTCTGGATTTT in the not modified pterion of 1-10-3MOE cytosine is the 2-thio-thymine 1427
335332 2096 2110 CTAGCCTCTGGATTT 1-10-4MOE 1429
390579 2096 2111 GCTAGCCTCTGGATTT1-1-1-10-3 MOE/4 '-sulfo- 1428
/ 2 '-O-[(2-methoxyl group) ethyl]-4 '-sulfo-/2 '-O-[(2-methoxyl group) ethyl] connect key for di-phosphate ester in the not modified pterion of cytosine in-4 '-sulfo-pterion
391173 2096 2110 CTAGCCTCTGGATTT2-10-3 (5 ' R)-5 '-methyl-methylene oxygen base BNA cytosine is not modified 1429
391174 2096 2110 CTAGCCTCTGGATTT2-10-3 (5 ' S)-5 '-methyl-methylene oxygen base BNA cytosine is not modified 1429
390607 2096 2111 GCTAGCCTCTGGATTTCytosine in the 3-10-3MOE/pentaF pterion is not modified 1428
390609 2096 2111 GCTAGCCTCTGGATTTCytosine in the 3-10-2-1 MOE/MOE/pentaF pterion is not modified 1428
384072 2096 2111 GCTAGCCTCTGGATTTCytosine in the 1-2-10-3 MOE/pentaF/pentaF pterion is not modified 1428
390606 2096 2111 GCTAGCCTCTGGATTTCytosine in the 1-2-10-3 MOE/pentaF/pentaF pterion is not modified 1428
390608 2096 2111 GCTAGCCTCTGGATTTCytosine in the 1-2-10-3 MOE/pentaF/pentaF pterion is not modified 1428
391869 2096 2111 GCTAGCCTCTGGATTT1-2-10-3 methylene oxygen base BNA/ (5 ' S)-5 '-methyl-methylene oxygen base BNA/ (5 ' S)-5 '-methyl-methylene oxygen base BNA cytosine is not modified 1428
385036 2096 2111 GCTAGCCTCTGGATTTCytosine in 1-2-10-3 OMe/2 '-O-methyl-4 '-sulfo-/2 '-O-methyl-4 '-sulfo-pterion is not modified 1428
385871 2096 2111 GCTAGCCTCTGGATTT1-2-10-3OMe/ 2 '-O-[(2-methoxyl group) ethyl]-4 '-sulfo-/2 '-O-[(2-methoxyl group) second 1428
Base] cytosine in-4 '-sulfo-pterion is not modified
386682 2096 2111 GCTAGCCTCTGGATTT1-2-10-32 '-(butyl acetamido)-palmitamide/MOE/MOE 1428
390582 2096 2111 GCTAGCCTCTGGATTT1-2-10-3 MOE/2 '-O-[(2-methoxyl group) ethyl]-4 '-sulfo-/2 '-O-[(2-methoxyl group) ethyl] connect key for di-phosphate ester in the not modified pterion of cytosine in-4 '-sulfo-pterion 1428
391868 2096 2111 GCTAGCCTCTGGATTT1-2-10-3 (5 ' R)-5 '-methyl-methylene oxygen base BNA/ methylene oxygen base BNA/ (5 ' R)-5 '-methyl-methylene oxygen base BNA cytosine is not modified 1428
336209 2095 2108 AGCCTCTGGATTTG 3-8-3MOE 1425
335331 2095 2109 TAGCCTCTGGATTTG 1-10-4MOE 1426
335376 2095 2109 TAGCCTCTGGATTTG1-10-4 methylene oxygen base BNA 1426
335377 2095 2109 TAGCCTCTGGATTTG1-10-4 methylene oxygen base BNA is a di-phosphate ester in the 3 ' pterion 1426
335330 2094 2108 AGCCTCTGGATTTGA 1-10-4MOE 1424
336208 2079 2092 GGCTCCTCTACTGT 3-8-3MOE 1423
336207 2073 2086 TCTACTGTTTTTGT 3-8-3MOE 1422
336206 2047 2060 CACCTTAAAATTTG 3-8-3MOE 1518
389776 2046 2057 CTTAAAATTTGG 1-9-2MOE 1421
389977 2046 2057 CTTAAAATTTGG 1-10-1MOE 1421
397990 2045 2058 CCTTAAAATTTGGA 2-10-2MOE 1420
336205 2043 2056 TTAAAATTTGGAGA 3-8-3MOE 1419
398058 2029 2040 AGTATCGGTTGG 1-10-1MOE 1418
336204 2028 2041 AAGTATCGGTTGGC 3-8-3MOE 1417
397989 2028 2041 AA GTATCGGTTGGC 2-10-2MOE 1417
336203 2002 2015 TGCTTTGTCAAGAT 3-8-3MOE 1416
389775 2002 2013 CTTTGTCAAGAT 1-9-2MOE 1177
389976 2002 2013 CTTTGTCAAGAT 1-10-1MOE 1177
397988 2001 2014 GCTTTGTCAAGATC 2-10-2MOE 1415
336202 1959 1972 TCCTTGTCATTATC 3-8-3MOE 1414
389774 1945 1956 CACGCTCTATAC 1-9-2MOE 1413
389975 1945 1956 CACGCTCTATAC 1-10-1MOE 1413
336201 1944 1957 GCACGCTCTATACT 3-8-3MOE 1412
336200 1929 1942 CAAATGCTATCGAT 3-8-3MOE 1411
389773 1904 1915 AGACTTCCATTT 1-9-2MOE 1410
389974 1904 1915 AGACTTCCATTT 1-10-1MOE 1410
336199 1902 1915 AGACTTCCATTTTC 3-8-3MOE 1409
336198 1884 1897 TTTTCTGAGGTTTC 3-8-3MOE 1408
398057 1878 1889 GGTTTCCTCTGG 1-10-1MOE 1407
397987 1877 1890 AGGTTTCCTCTGGT 2-10-2MOE 1406
336197 1873 1886 TTCCTCTGGTCCTG 3-8-3MOE 1405
390015 1868 1879 GGTCCTGGTATG 1-10-1MOE 1404
398056 1865 1876 CCTGGTATGAAG 1-10-1MOE 1403
336196 1864 1877 TCCTGGTATGAAGA 3-8-3MOE 1402
397986 1864 1877 TCCTGGTATGAAGA 2-10-2MOE 1402
398055 1849 1860 TATTTACCCAAA 1-10-1MOE 1401
397985 1848 1861 GTATTTACCCAAAA 2-10-2MOE 1400
336195 1847 1860 TATTTACCCAAAAG 3-8-3MOE 1399
389772 1846 1857 TTACCCAAAAGT 1-9-2MOE 1398
389973 1846 1857 TTACCCAAAAGT 1-10-1MOE 1398
336194 1838 1851 AAAAGTGAAACATT 3-8-3MOE 1145
398054 1836 1847 GTGAAACATTTT 1-10-1MOE 1144
397984 1835 1848 AGTGAAACATTTTG 2-10-2MOE 1397
336193 1828 1841 CATTTTGTCCTTTT 3-8-3MOE 1182
336192 1810 1823 CATCTTGTTCTGTT 3-8-3MOE 1396
336191 1800 1813 TGTTTGTGGAAGAA 3-8-3MOE 1395
398053 1796 1807 TGGAAGAACTCT 1-10-1MOE 1394
397983 1795 1808 GTGGAAGAACTCTA 2-10-2MOE 1393
389771 1794 1805 GAAGAACTCTAC 1-9-2MOE 1392
389972 1794 1805 GAAGAACTCTAC 1-10-1MOE 1392
336190 1789 1802 GAACTCTACTTTGA 3-8-3MOE 1391
336189 1773 1786 TCACCACACACAGG 3-8-3MOE 1390
336188 1754 1767 GCTGAGGGAACTCA 3-8-3MOE 1389
398052 1751 1762 GGGAACTCAAAG 1-10-1MOE 1388
389770 1750 1761 GGAACTCAAAGT 1-9-2MOE 1386
389971 1750 1761 GGAACTCAAAGT 1-10-1MOE 1386
397982 1750 1763 AGGGAACTCAAAGT 2-10-2MOE 1387
336187 1747 1760 GAACTCAAAGTACA 3-8-3MOE 1385
390012 1745 1756 TCAAAGTACATG 1-10-1MOE 1384
336186 1688 1701 TCTTCACCTTTAGC 3-8-3MOE 1383
398051 1684 1695 CCTTTAGCTGGC 1-10-1MOE 1220
397981 1683 1696 ACCTTTAGCTGGCA 2-10-2MOE 1382
336185 1677 1690 AGCTGGCAGACCAC 3-8-3MOE 1381
389769 1676 1687 TGGCAGACCACA 1-9-2MOE 1249
389970 1676 1687 TGGCAGACCACA 1-10-1MOE 1249
392060 1675 1688 CTGGCAGACCACAACytosine in the 2-10-2 methylene oxygen base BNA interval is not modified 1380
398050 1672 1683 AGACCACAAACT 1-10-1MOE 1379
397980 1671 1684 CAGACCACAAACTG 2-10-2MOE 1378
390011 1658 1669 GGATTGCAAGTT 1-10-1MOE 1238
336184 1655 1668 GATTGCAAGTTCCG 3-8-3MOE 1508
336183 1644 1657 CCGCCACTGAACAT 3-8-3MOE 1377
390010 1643 1654 CCACTGAACATT 1-10-1MOE 1240
398049 1641 1652 ACTGAACATTGG 1-10-1MOE 1376
397979 1640 1653 CACTGAACATTGGA 2-10-2MOE 1375
336182 1633 1646 CATTGGAATAGTTT 3-8-3MOE 1374
389768 1630 1641 GAATAGTTTCAA 1-9-2MOE 1373
389969 1630 1641 GAATAGTTTCAA 1-10-1MOE 1373
398048 1626 1637 AGTTTCAAACAT 1-10-1MOE 1372
397978 1625 1638 TAGTTTCAAACATC 2-10-2MOE 1371
336181 1623 1636 GTTTCAAACATCAT 3-8-3MOE 1370
398047 1614 1625 CATCTTGTGAAA 1-10-1MOE 1369
336180 1613 1626 TCATCTTGTGAAAC 3-8-3MOE 1368
390009 1613 1624 ATCTTGTGAAAC 1-10-1MOE 1175
397977 1613 1626 TCATCTTGTGAAAC 2-10-2MOE 1368
390007 1563 1574 CAGGTAGCTATA 1-10-1MOE 1367
336179 1561 1574 CAGGTAGCTATAAT 3-8-3MOE 1366
336178 1541 1554 CATAGCGCCTCTGA 3-8-3MOE 1365
336177 1534 1547 CCTCTGACTGGGAA 3-8-3MOE 1364
389767 1534 1545 TCTGACTGGGAA 1-9-2MOE 1151
389968 1534 1545 TCTGACTGGGAA 1-10-1MOE 1151
335344 1503 1516 TCTCTGGTCCTTAC 2-10-2MOE 1363
335355 1503 1516 TCTCTGGTCCTTACConnect key for di-phosphate ester in the 2-10-2MOE pterion 1363
335370 1503 1516 TCTCTGGTCCTTACConnect key for di-phosphate ester in the 2-10-2 methylene oxygen base BNA pterion 1363
335381 1503 1516 TCTCTGGTCCTTAC2-10-2 methylene oxygen base BNA 1363
335411 1503 1516 TCTCTGGTCCTTAC2-10-2MOE 3 ' C is a 9-(amino ethoxy) phenoxazine 1363
335412 1503 1516 TCTCTGGTCCTTACC in the 2-10-2MOE 5 ' pterion is a 9-(amino ethoxy) phenoxazine 1363
335413 1503 1516 TCTCTGGTCCTTACC in the 2-10-2MOE pterion is a 9-(amino ethoxy) phenoxazine 1363
336176 1502 1515 CTCTGGTCCTTACT 3-8-3MOE 1361
335345 1502 1517 GTCTCTGGTCCTTACT 3-10-3MOE 1362
335356 1502 1517 GTCTCTGGTCCTTACTConnect key for di-phosphate ester in the 3-10-3MOE pterion 1362
335371 1502 1517 GTCTCTGGTCCTTACTConnect key for di-phosphate ester in the 3-10-3 methylene oxygen base BNA pterion 1362
335382 1502 1517 GTCTCTGGTCCTTACT3-10-3 methylene oxygen base BNA 1362
335414 1502 1517 GTCTCTGGTCCTTACTC in the 3-10-3MOE 3 ' pterion is a 9-(amino ethoxy) phenoxazine 1362
335415 1502 1517 GTCTCTGGTCCTTACTC in the 3-10-3MOE 5 ' pterion is for being 9-(amino ethoxy) 1362
Phenoxazine
335416 1502 1517 GTCTCTGGTCCTTACTC in the 3-10-3MOE pterion is a 9-(amino ethoxy) phenoxazine 1362
336175 1495 1508 CCTTACTTCCCCAT 3-8-3MOE 1360
336174 1472 1485 GGGCCTCTTGTGCC 3-8-3MOE 1359
336173 1465 1478 TTGTGCCTTTAAAA 3-8-3MOE 1358
398046 1465 1476 GTGCCTTTAAAA 1-10-1MOE 1199
389766 1464 1475 TGCCTTTAAAAA 1-9-2MOE 1217
389967 1464 1475 TGCCTTTAAAAA 1-10-1MOE 1217
397976 1464 1477 TGTGCCTTTAAAAA 2-10-2MOE 1357
336172 1437 1450 AATAAATATGCACA 3-8-3MOE 1356
398045 1423 1434 TCATTACACCAG 1-10-1MOE 1355
336171 1422 1435 ATCATTACACCAGT 3-8-3MOE 1354
389765 1422 1433 CATTACACCAGT 1-9-2MOE 1353
389966 1422 1433 CATTACACCAGT 1-10-1MOE 1353
397975 1422 1435 ATCATTACACCAGT 2-10-2MOE 1354
390005 1400 1411 CCAGCTTTACAG 1-10-1MOE 1352
336170 1392 1405 TTACAGTGAATTGC 3-8-3MOE 1351
398044 1382 1393 GCTGCAACATGA 1-10-1MOE 1350
336169 1381 1394 TGCTGCAACATGAT 3-8-3MOE 1349
389764 1381 1392 CTGCAACATGAT 1-9-2MOE 1018
389965 1381 1392 CTGCAACATGAT 1-10-1MOE 1018
397974 1381 1394 TGCTGCAACATGAT 2-10-2MOE 1349
336168 1362 1375 TCTTCACTTAGCCA 3-8-3MOE 1348
390004 1362 1373 TTCACTTAGCCA 1-10-1MOE 1208
336167 1353 1366 AGCCATTGGTCAAG 3-8-3MOE 1347
398043 1345 1356 CAAGATCTTCAC 1-10-1MOE 1244
336166 1344 1357 TCAAGATCTTCACA 3-8-3MOE 1346
390003 1344 1355 AAGATCTTCACA 1-10-1MOE 1243
397973 1344 1357 TCAAGATCTTCACA 2-10-2MOE 1346
336165 1329 1342 AAGGGTTTGATAAG 3-8-3MOE 1345
390002 1322 1333 ATAAGTTCTAGC 1-10-1MOE 1344
336164 1318 1331 AAGTTCTAGCTGTG 3-8-3MOE 1343
398042 1305 1316 TGGGTTATGGTC 1-10-1MOE 1214
336163 1304 1317 GTGGGTTATGGTCT 3-8-3MOE 1342
397972 1304 1317 GTGGGTTATGGTCT 2-10-2MOE 1342
398089 1298 1309 TGGTCTTCAAAA 1-10-1MOE 1341
389763 1296 1307 GTCTTCAAAAGG 1-9-2MOE 1197
389964 1296 1307 GTCTTCAAAAGG 1-10-1MOE 1197
398041 1294 1305 CTTCAAAAGGAT 1-10-1MOE 1196
336162 1293 1306 TCTTCAAAAGGATA 3-8-3MOE 1340
397971 1293 1306 TCTTCAAAAGGATA 2-10-2MOE 1340
398040 1279 1290 GTGCAACTCTGC 1-10-1MOE 1236
336161 1278 1291 TGTGCAACTCTGCA 3-8-3MOE 1235
397970 1278 1291 TGTGCAACTCTGCA 2-10-2MOE 1235
398039 1264 1275 TAAATTTGGCGG 1-10-1MOE 1339
397969 1263 1276 TTAAATTTGGCGGT 2-10-2MOE 1338
336160 1261 1274 AAATTTGGCGGTGT 3-8-3MOE 1337
336159 1253 1266 CGGTGTCATAATGT 3-8-3MOE 1336
398038 1252 1263 TGTCATAATGTC 1-10-1MOE 1200
390000 1251 1262 GTCATAATGTCT 1-10-1MOE 1194
397968 1251 1264 GTGTCATAATGTCT 2-10-2MOE 1195
336158 1227 1240 AGATTGTATATCTT 3-8-3MOE 1335
389762 1220 1231 ATCTTGTAATGG 1-9-2MOE 1334
389963 1220 1231 ATCTTGTAATGG 1-10-1MOE 1334
336157 1215 1228 TTGTAATGGTTTTT 3-8-3MOE 1333
336156 1202 1215 TATGCTTTGAATCC 3-8-3MOE 1332
389998 1199 1210 TTTGAATCCAAA 1-10-1MOE 1331
397967 1198 1211 CTTTGAATCCAAAA 2-10-2MOE 1330
336155 1190 1203 CCAAAAACCTTACT 3-8-3MOE 1500
336154 1176 1189 ACATCATCAATATT 3-8-3MOE 1329
389761 1171 1182 CAATATTGTTCC 1-9-2MOE 1328
389962 1171 1182 CAATATTGTTCC 1-10-1MOE 1328
398037 1170 1181 AATATTGTTCCT 1-10-1MOE 1202
397966 1169 1182 CAATATTGTTCCTG 2-10-2MOE 1327
336153 1164 1177 TTGTTCCTGTATAC 3-8-3MOE 1326
336152 1149 1162 CCTTCAAGTCTTTC 3-8-3MOE 1325
389996 1141 1152 TTTCTGCAGGAA 1-10-1MOE 1165
336151 1138 1151 TTCTGCAGGAAATC 3-8-3MOE 1324
398036 1138 1149 CTGCAGGAAATC 1-10-1MOE 1323
397965 1137 1150 TCTGCAGGAAATCC 2-10-2MOE 1322
389760 1129 1140 ATCCCATAGCAA 1-9-2MOE 1321
389961 1129 1140 ATCCCATAGCAA 1-10-1MOE 1321
398035 1126 1137 CCATAGCAATAA 1-10-1MOE 1320
336150 1125 1138 CCCATAGCAATAAT 3-8-3MOE 1319
397964 1125 1138 CCCATAGCAATAAT 2-10-2MOE 1319
336149 1110 1123 TTTGGATAAATATA 3-8-3MOE 1496
389995 1106 1117 TAAATATAGGTC 1-10-1MOE 1516
336148 1100 1113 TATAGGTCAAGTCT 3-8-3MOE 1495
398034 1099 1110 AGGTCAAGTCTA 1-10-1MOE 1300
397963 1098 1111 TAGGTCAAGTCTAA 2-10-2MOE 1494
389994 1095 1106 CAAGTCTAAGTC 1-10-1MOE 1299
336147 1090 1103 GTCTAAGTCGAATC 3-8-3MOE 1298
389993 1083 1094 GAATCCATCCTC 1-10-1MOE 1297
336146 1080 1093 AATCCATCCTCTTG 3-8-3MOE 1296
398033 1077 1088 ATCCTCTTGATA 1-10-1MOE 1198
397962 1076 1089 CATCCTCTTGATAT 2-10-2MOE 1295
336145 1070 1083 CTTGATATCTCCTT 3-8-3MOE 1294
336144 1057 1070 TTTGTTTCTGCTAA 3-8-3MOE 1293
389759 1056 1067 GTTTCTGCTAAC 1-9-2MOE 1292
389960 1056 1067 GTTTCTGCTAAC 1-10-1MOE 1292
392059 1055 1068 TGTTTCTGCTAACGCytosine in the 2-10-2 methylene oxygen base BNA interval is not modified 1291
336143 1044 1057 ACGATCTCTTTGAT 3-8-3MOE 1290
398032 1038 1049 TTTGATGATGGC 1-10-1MOE 1222
397961 1037 1050 CTTTGATGATGGCT 2-10-2MOE 1289
389992 1036 1047 TGATGATGGCTG 1-10-1MOE 1288
336142 1032 1045 ATGATGGCTGTCAT 3-8-3MOE 1287
389991 1021 1032 TGTCTGGGAGCC 1-10-1MOE 1286
392058 1020 1033 ATGTCTGGGAGCCTCytosine in the 2-10-2 methylene oxygen base BNA interval is not modified 1285
397960 1020 1033 ATGTCTGGGAGCCT 2-10-2MOE 1285
389990 1007 1018 TGGCTGAAGAAA 1-10-1MOE 1284
397959 1006 1019 GTGGCTGAAGAAAA 2-10-2MOE 1283
398031 987 998 GAGAGATGGCAG 1-10-1MOE 1282
397958 986 999 AGAGAGATGGCAGA 2-10-2MOE 1281
389758 983 994 GATGGCAGAAGC 1-9-2MOE 1280
389959 983 994 GATGGCAGAAGC 1-10-1MOE 1280
398030 976 987 GAAGCTGCTGGT 1-10-1MOE 1143
397957 975 988 AGAAGCTGCTGGTG 2-10-2MOE 1279
389989 953 964 TTCTGCAGGATG 1-10-1MOE 1170
389757 941 952 GAAATGGCTCTG 1-9-2MOE 1278
389958 941 952 GAAATGGCTCTG 1-10-1MOE 1278
397956 940 953 GGAAATGGCTCTGG 2-10-2MOE 1277
398029 931 942 TGGACTTGGCGG 1-10-1MOE 1186
397955 930 943 CTGGACTTGGCGGT 2-10-2MOE 1276
398028 914 925 GATGCCCCTCGC 1-10-1MOE 1275
397954 913 926 TGATGCCCCTCGCT 2-10-2MOE 1274
398027 883 894 GGACCGCAGCCG 1-10-1MOE 1155
397953 882 895 TGGACCGCAGCCGG 2-10-2MOE 1273
389756 874 885 CCGGGTAATGGC 1-9-2MOE 1272
389957 874 885 CCGGGTAATGGC 1-10-1MOE 1272
398026 867 878 ATGGCTGCTGCG 1-10-1MOE 1160
397952 866 879 AATGGCTGCTGCGG 2-10-2MOE 1271
389987 848 859 CTGGATGGTTGC 1-10-1MOE 1270
389755 806 817 AGAGGCCTGGCA 1-9-2MOE 1269
389956 806 817 AGAGGCCTGGCA 1-10-1MOE 1269
389985 584 595 ATGGTGACAGGC 1-10-1MOE 1268
398025 581 592 GTGACAGGCGAC 1-10-1MOE 1267
397951 580 593 GGTGACAGGCGACT 2-10-2MOE 1266
389754 312 323 TGCTCACAGGCG 1-9-2MOE 1158
389955 312 323 TGCTCACAGGCG 1-10-1MOE 1158
398024 231 242 CAGCGGCTCAAC 1-10-1MOE 1265
397950 230 243 ACAGCGGCTCAACT 2-10-2MOE 1264
389982 205 216 CATGGCTGCAGC 1-10-1MOE 1161
392056 204 217 TCATGGCTGCAGCT2-10-2 methylene oxygen base BNA 1263
394424 204 217 TCATGGCTGCAGCT 2-10-2MOE 1263
396007 204 217 TCATGGCTGCAGCT2-10-2 (R)-CMOE BNA cytosine is not modified 1263
396008 204 217 TCATGGCTGCAGCT2-10-2 (S)-CMOE BNA cytosine is not modified 1263
396009 204 217 TCATGGCTGCAGCT2-10-2 α-L-methylene oxygen base BNA cytosine is not modified 1263
396566 204 217 TCATGGCTGCAGCTThe amino BNA cytosine of 2-10-2 oxygen base is not modified 1263
396567 204 217 TCATGGCTGCAGCTThe amino BNA cytosine of 2-10-2N-methyl-oxygen base is not modified 1263
396568 204 217 TCATGGCTGCAGCT2-10-2 (6R)-6-methyl methylene oxygen base BNA 1263
Cytosine is not modified
397913 204 217 TCATGGCTGCAGCTCytosine in the 2-10-2OMe interval is not modified 1263
401974 204 217 TCATGGCTGCAGCTThe 2-10-2OMe cytosine is not modified 1263
403737 204 217 TCATGGCTGCAGCT2-10-2 methylene oxygen base BNA is a 5-thiazole nucleus base in the pterion 1263
404121 204 217 TCATGGCTGCAGCT2-10-2 methylene oxygen base BNA is 5-methylcytosine a 3 ' terminal THF thiophosphate in the interval 1263
404228 204 217 TCATGGCTGCAGCTIt in the 2-10-2 methylene oxygen base BNA interval oppositely dealkalize base (5 '-terminal reverse abasic) of 5-methylcytosine 5 '-end 1263
396024 204 217 TCATGGCTGCAGCT2-10-2 (6 ' S)-6 '-methyl-methylene oxygen base BNA cytosine is not modified 1263
396569 204 217 TCATGGCTGCAGCT2-10-2 (5 ' S)-5 '-methyl-methylene oxygen base BNA cytosine is not modified 1263
396577 204 217 TCATGGCTGCAGCTCytosine in methylene oxygen base BNA/ methylene oxygen base BNA/2 '-(butyl acetamido)-palmitamide/interval is not modified 1263
396576 204 217 TCATGGCTGCAGCTCytosine in 1-1-10-22 '-(butyl acetamido)-palmitamide/methylene oxygen base BNA/ methylene oxygen base BNA interval is not modified 1263
398023 191 202 CCGAGAGGAGAG 1-10-1MOE 1262
397949 190 203 TCCGAGAGGAGAGA 2-10-2MOE 1261
398022 126 137 AAGAGTCCCGCC 1-10-1MOE 1260
397948 125 138 AAAGAGTCCCGCCA 2-10-2MOE 1259
Table 22: the short antisense compounds of targeting SEQ ID NO:15
ISIS No.5 ' target site3 ' target siteSequence (5 '-3 ')The Gapmer die body SEQ ID NO
397948 525 538 AAAGAGTCCCGCCA 2-10-2MOE 259
398022 526 537 AAGAGTCCCGCC 1-10-1MOE 260
397949 590 603 TCCGAGAGGAGAGA 2-10-2MOE 261
398023 591 602 CCGAGAGGAGAG 1-10-1MOE 262
394424 604 617 TCATGGCTGCAGCT 2-10-2MOE 263
397913 604 617 TCATGGCTGCAGCTCytosine in the 2-10-2OMe interval is not modified 1263
401974 604 617 TCATGGCTGCAGCTThe 2-10-2Ome cytosine is not modified 1263
403737 604 617 TCATGGCTGCAGCT2-10-2 methylene oxygen base BNA is a 5-thiazole nucleus base in the pterion 1263
392056 604 617 TCATGGCTGCAGCTCytosine in the 2-10-2 methylene oxygen base BNA interval is not modified 1263
396576 604 617 TCATGGCTGCAGCTCytosine in 1-1-10-22 '-(butyl acetamido)-palmitamide/methylene oxygen base BNA/ methylene oxygen base BNA interval is not modified 1263
396577 604 617 TCATGGCTGCAGCTCytosine in methylene oxygen base BNA/ methylene oxygen base BNA/2 '-(butyl acetamido)-palmitamide/interval is not modified 1263
404121 604 617 TCATGGCTGCAGCT2-10-2 methylene oxygen base BNA is 5-methylcytosine a 3 ' terminal THF thiophosphate in the interval 1263
404228 604 617 TCATGGCTGCAGCTIt in the 2-10-2 methylene oxygen base BNA interval oppositely dealkalize base of 5-methylcytosine 5 '-end 1263
396007 604 617 TCATGGCTGCAGCT2-10-2 (R)-CMOE BNA cytosine is not modified 1263
396008 604 617 TCATGGCTGCAGCT 2-10-2(S)-CMOE BNA 1263
Cytosine is not modified
396009 604 617 TCATGGCTGCAGCT2-10-2 α-L-methylene oxygen base BNA cytosine is not modified 1263
396024 604 617 TCATGGCTGCAGCT2-10-2 (6 ' S)-6 '-methyl-methylene oxygen base BNA cytosine is not modified 1263
396566 604 617 TCATGGCTGCAGCTThe amino BNA cytosine of 2-10-2 oxygen base is not modified 1263
396567 604 617 TCATGGCTGCAGCTThe amino BNA cytosine of 2-10-2N-methyl-oxygen base is not modified 1263
396568 604 617 TCATGGCTGCAGCT2-10-2 (6R)-6-methyl methylene oxygen base BNA cytosine is not modified 1263
396569 604 617 TCATGGCTGCAGCT2-10-2 (5 ' S)-5 '-methyl-methylene oxygen base BNA cytosine is not modified 1263
389982 605 616 CATGGCTGCAGC 1-10-1MOE 1161
397950 630 643 ACAGCGGCTCAACT 2-10-2MOE 1264
398024 631 642 CAGCGGCTCAAC 1-10-1MOE 1265
389955 712 723 TGCTCACAGGCG 1-10-1MOE 1158
389754 712 723 TGCTCACAGGCG 1-9-2MOE 1158
397951 980 993 GGTGACAGGCGACT 2-10-2MOE 1266
398025 981 992 GTGACAGGCGAC 1-10-1MOE 1267
389985 984 995 ATGGTGACAGGC 1-10-1MOE 1268
389956 1206 1217 AGAGGCCTGGCA 1-10-1MOE 1269
389755 1206 1217 AGAGGCCTGGCA 1-9-2MOE 1269
389987 1248 1259 CTGGATGGTTGC 1-10-1MOE 1270
397952 1266 1279 AATGGCTGCTGCGG 2-10-2MOE 1271
398026 1267 1278 ATGGCTGCTGCG 1-10-1MOE 1160
389957 1274 1285 CCGGGTAATGGC 1-10-1MOE 1272
389756 1274 1285 CCGGGTAATGGC 1-9-2MOE 1272
397953 1282 1295 TGGACCGCAGCCGG 2-10-2MOE 1273
398027 1283 1294 GGACCGCAGCCG 1-10-1MOE 1155
397954 1313 1326 TGATGCCCCTCGCT 2-10-2MOE 1274
398028 1314 1325 GATGCCCCTCGC 1-10-1MOE 1275
397955 1330 1343 CTGGACTTGGCGGT 2-10-2MOE 1276
398029 1331 1342 TGGACTTGGCGG 1-10-1MOE 1186
397956 1340 1353 GGAAATGGCTCTGG 2-10-2MOE 1277
389958 1341 1352 GAAATGGCTCTG 1-10-1MOE 1278
389757 1341 1352 GAAATGGCTCTG 1-9-2MOE 1278
389989 1353 1364 TTCTGCAGGATG 1-10-1MOE 1170
397957 1375 1388 AGAAGCTGCTGGTG 2-10-2MOE 1279
398030 1376 1387 GAAGCTGCTGGT 1-10-1MOE 1143
389959 1383 1394 GATGGCAGAAGC 1-10-1MOE 1280
389758 1383 1394 GATGGCAGAAGC 1-9-2MOE 1280
397958 1386 1399 AGAGAGATGGCAGA 2-10-2MOE 1281
398031 1387 1398 GAGAGATGGCAG 1-10-1MOE 1282
397959 1406 1419 GTGGCTGAAGAAAA 2-10-2MOE 1283
389990 1407 1418 TGGCTGAAGAAA 1-10-1MOE 1284
397960 1420 1433 ATGTCTGGGAGCCT 2-10-2MOE 1285
392058 1420 1433 ATGTCTGGGAGCCT2-10-2 methylene oxygen base BNA is a 5-methylcytosine in the pterion 1285
389991 1421 1432 TGTCTGGGAGCC 1-10-1MOE 1286
336142 1432 1445 ATGATGGCTGTCAT 3-8-3MOE 1287
389992 1436 1447 TGATGATGGCTG 1-10-1MOE 1288
397961 1437 1450 CTTTGATGATGGCT 2-10-2MOE 1289
398032 1438 1449 TTTGATGATGGC 1-10-1MOE 1222
336143 1444 1457 ACGATCTCTTTGAT 3-8-3MOE 1290
392059 1455 1468 TGTTTCTGCTAACG2-10-2 methylene oxygen base BNA is a 5-methylcytosine in the pterion 1291
389960 1456 1467 GTTTCTGCTAAC 1-10-1MOE 1292
389759 1456 1467 GTTTCTGCTAAC 1-9-2MOE 1292
336144 1457 1470 TTTGTTTCTGCTAA 3-8-3MOE 1293
336145 1470 1483 CTTGATATCTCCTT 3-8-3MOE 1294
397962 1476 1489 CATCCTCTTGATAT 2-10-2MOE 1295
398033 1477 1488 ATCCTCTTGATA 1-10-1MOE 1198
336146 1480 1493 AATCCATCCTCTTG 3-8-3MOE 1296
389993 1483 1494 GAATCCATCCTC 1-10-1MOE 1297
336147 1490 1503 GTCTAAGTCGAATC 3-8-3MOE 1298
389994 1495 1506 CAAGTCTAAGTC 1-10-1MOE 1299
398034 1499 1510 AGGTCAAGTCTA 1-10-1MOE 1300
398010 1500 1513 TACAGGTCAAGTCT 2-10-2MOE 1166
398077 1501 1512 ACAGGTCAAGTC 1-10-1MOE 1167
398011 1512 1525 CGCAGAAATGGATA 2-10-2MOE 1301
398078 1513 1524 GCAGAAATGGAT 1-10-1MOE 1302
398012 1570 1583 TTCGCATCCGTCTA 2-10-2MOE 1303
398079 1571 1582 TCGCATCCGTCT 1-10-1MOE 1304
398013 1663 1676 CCCTAGGTTGAATA 2-10-2MOE 1305
398080 1664 1675 CCTAGGTTGAAT 1-10-1MOE 1306
398014 2025 2038 GTTATGCAAATCAG 2-10-2MOE 1307
398081 2026 2037 TTATGCAAATCA 1-10-1MOE 1308
398015 2620 2633 TGACTCAGTAAATT 2-10-2MOE 1309
398082 2621 2632 GACTCAGTAAAT 1-10-1MOE 1310
398016 2655 2668 TTAAAATTCTTGGG 2-10-2MOE 1311
398083 2656 2667 TAAAATTCTTGG 1-10-1MOE 1312
398017 2687 2700 CCTAACTTTTAGAC 2-10-2MOE 1313
398084 2688 2699 CTAACTTTTAGA 1-10-1MOE 1314
398018 2745 2758 ACCTGAAACTGCAA 2-10-2MOE 1315
398085 2746 2757 CCTGAAACTGCA 1-10-1MOE 1157
398019 13166 13179 GTGTCAAAACCACT 2-10-2MOE 1316
398086 13167 13178 TGTCAAAACCAC 1-10-1MOE 1204
398020 14675 14688 CCTATTCCCACTGA 2-10-2MOE 1317
398087 14676 14687 CTATTCCCACTG 1-10-1MOE 1318
390033 15351 15362 AGCCAACTGCAA 1-10-1MOE 1483
398021 30985 30998 TTGGATAAATATCT 2-10-2MOE 1168
398088 30986 30997 TGGATAAATATC 1-10-1MOE 1169
397964 31001 31014 CCCATAGCAATAAT 2-10-2MOE 1319
336150 31001 31014 CCCATAGCAATAAT 3-8-3MOE 1319
398035 31002 31013 CCATAGCAATAA 1-10-1MOE 1320
389961 31005 31016 ATCCCATAGCAA 1-10-1MOE 1321
389760 31005 31016 ATCCCATAGCAA 1-9-2MOE 1321
397965 31013 31026 TCTGCAGGAAATCC 2-10-2MOE 1322
398036 31014 31025 CTGCAGGAAATC 1-10-1MOE 1323
336151 31014 31027 TTCTGCAGGAAATC 3-8-3MOE 1324
389996 31017 31028 TTTCTGCAGGAA 1-10-1MOE 1165
336152 31025 31038 CCTTCAAGTCTTTC 3-8-3MOE 1325
336153 31040 31053 TTGTTCCTGTATAC 3-8-3MOE 1326
397966 31045 31058 CAATATTGTTCCTG 2-10-2MOE 1327
398037 31046 31057 AATATTGTTCCT 1-10-1MOE 1202
389962 31047 31058 CAATATTGTTCC 1-10-1MOE 1328
389761 31047 31058 CAATATTGTTCC 1-9-2MOE 1328
336154 31052 31065 ACATCATCAATATT 3-8-3MOE 1329
389977 31480 31491 CTTAAAATTTGG 1-10-1MOE 1421
389776 31480 31491 CTTAAAATTTGG 1-9-2MOE 1421
397967 62446 62459 CTTTGAATCCAAAA 2-10-2MOE 1330
389998 62447 62458 TTTGAATCCAAA 1-10-1MOE 1331
336156 62450 62463 TATGCTTTGAATCC 3-8-3MOE 1332
336157 62463 62476 TTGTAATGGTTTTT 3-8-3MOE 1333
389963 62468 62479 ATCTTGTAATGG 1-10-1MOE 1334
389762 62468 62479 ATCTTGTAATGG 1-9-2MOE 1334
336158 62475 62488 AGATTGTATATCTT 3-8-3MOE 1335
390000 67987 67998 GTCATAATGTCT 1-10-1MOE 1194
397968 67987 68000 GTGTCATAATGTCT 2-10-2MOE 1195
398038 67988 67999 TGTCATAATGTC 1-10-1MOE 1200
336159 67989 68002 CGGTGTCATAATGT 3-8-3MOE 1336
336160 67997 68010 AAATTTGGCGGTGT 3-8-3MOE 1337
397969 67999 68012 TTAAATTTGGCGGT 2-10-2MOE 1338
398039 68000 68011 TAAATTTGGCGG 1-10-1MOE 1339
397971 69952 69965 TCTTCAAAAGGATA 2-10-2MOE 1340
336162 69952 69965 TCTTCAAAAGGATA 3-8-3MOE 1340
398041 69953 69964 CTTCAAAAGGAT 1-10-1MOE 1196
389964 69955 69966 GTCTTCAAAA GG 1-10-1MOE 1197
389763 69955 69966 GTCTTCAAAAGG 1-9-2MOE 1197
398089 69957 69968 TGGTCTTCAAAA 1-10-1MOE 1341
397972 69963 69976 GTGGGTTATGGTCT 2-10-2MOE 1342
336163 69963 69976 GTGGGTTATGGTCT 3-8-3MOE 1342
398042 69964 69975 TGGGTTATGGTC 1-10-1MOE 1214
336164 69977 69990 AAGTTCTAGCTGTG 3-8-3MOE 1343
390002 69981 69992 ATAAGTTCTAGC 1-10-1MOE 1344
336165 69988 70001 AAGGGTTTGATAAG 3-8-3MOE 1345
390003 70003 70014 AAGATCTTCACA 1-10-1MOE 1243
397973 70003 70016 TCAAGATCTTCACA 2-10-2MOE 1346
336166 70003 70016 TCAAGATCTTCACA 3-8-3MOE 1346
398043 70004 70015 CAAGATCTTCAC 1-10-1MOE 1244
336167 70012 70025 AGCCATTGGTCAAG 3-8-3MOE 1347
390004 70021 70032 TTCACTTAGCCA 1-10-1MOE 1208
336168 70021 70034 TCTTCACTTAGCCA 3-8-3MOE 1348
389965 70040 70051 CTGCAACATGAT 1-10-1MOE 1018
389764 70040 70051 CTGCAACATGAT 1-9-2MOE 1018
397974 70040 70053 TGCTGCAACATGAT 2-10-2MOE 1349
336169 70040 70053 TGCTGCAACATGAT 3-8-3MOE 1349
398044 70041 70052 GCTGCAACATGA 1-10-1MOE 1350
336170 70051 70064 TTACAGTGAATTGC 3-8-3MOE 1351
390005 70059 70070 CCAGCTTTACAG 1-10-1MOE 1352
389966 70081 70092 CATTACACCAGT 1-10-1MOE 1353
389765 70081 70092 CATTACACCAGT 1-9-2MOE 1353
397975 70081 70094 ATCATTACACCAGT 2-10-2MOE 1354
336171 70081 70094 ATCATTACACCAGT 3-8-3MOE 1354
398045 70082 70093 TCATTACACCAG 1-10-1MOE 1355
336172 70096 70109 AATAAATATGCACA 3-8-3MOE 1356
389967 70123 70134 TGCCTTTAAAAA 1-10-1MOE 1217
389766 70123 70134 TGCCTTTAAAAA 1-9-2MOE 1217
397976 70123 70136 TGTGCCTTTAAAAA 2-10-2MOE 1357
398046 70124 70135 GTGCCTTTAAAA 1-10-1MOE 1199
336173 70124 70137 TTGTGCCTTTAAAA 3-8-3MOE 1358
336174 70131 70144 GGGCCTCTTGTGCC 3-8-3MOE 1359
336175 70154 70167 CCTTACTTCCCCAT 3-8-3MOE 1360
335345 70161 70176 GTCTCTGGTCCTTACT 3-10-3MOE 1362
335356 70161 70176 GTCTCTGGTCCTTACTConnect key for di-phosphate ester in the 3-10-3MOE pterion 1362
335414 70161 70176 GTCTCTGGTCCTTACTC in the 3-10-3MOE 3 ' pterion is a 9-(amino ethoxy) phenoxazine 1362
335415 70161 70176 GTCTCTGGTCCTTACTC in the 3-10-3MOE 5 ' pterion is a 9-(amino ethoxy) phenoxazine 1362
335416 70161 70176 GTCTCTGGTCCTTACTC in the 3-10-3MOE pterion is a 9-(amino ethoxy) phenoxazine 1362
336176 70161 70174 CTCTGGTCCTTACT 3-8-3MOE 1361
335371 70161 70176 GTCTCTGGTCCTTACTConnect key for di-phosphate ester in the 3-10-3 methylene oxygen base BNA pterion 1362
335382 70161 70176 GTCTCTGGTCCTTACT3-10-3 methylene oxygen base BNA 1362
335344 70162 70175 TCTCTGGTCCTTAC 2-10-2MOE 1363
335355 70162 70175 TCTCTGGTCCTTACConnect key for di-phosphate ester in the 2-10-2MOE pterion 1363
335411 70162 70175 TCTCTGGTCCTTAC2-10-2MOE 3 ' C is a 9-(amino ethoxy) phenoxazine 1363
335412 70162 70175 TCTCTGGTCCTTACSecond C of 2-10-2MOE is 9-(amino ethoxy) phenoxazine 1363
335413 70162 70175 TCTCTGGTCCTTACSecond of 2-10-2MOE and 3 ' terminal C are 9-(amino ethoxy) phenoxazine 1363
335370 70162 70175 TCTCTGGTCCTTACConnect key for di-phosphate ester in the 2-10-2 methylene oxygen base BNA pterion 1363
335381 70162 70175 TCTCTGGTCCTTAC2-10-2 methylene oxygen base BNA 1363
398068 79799 79810 ACAGCTACACAA 1-10-1MOE 1472
389968 89056 89067 TCTGACTGGGAA 1-10-1MOE 1151
389767 89056 89067 TCTGACTGGGAA 1-9-2MOE 1151
336177 89056 89069 CCTCTGACTGGGAA 3-8-3MOE 1364
336178 89063 89076 CATAGCGCCTCTGA 3-8-3MOE 1365
336179 89083 89096 CAGGTAGCTATAAT 3-8-3MOE 1366
390007 89085 89096 CAGGTAGCTATA 1-10-1MOE 1367
390009 89135 89146 ATCTTGTGAAAC 1-10-1MOE 1175
397977 89135 89148 TCATCTTGTGAAAC 2-10-2MOE 1368
336180 89135 89148 TCATCTTGTGAAAC 3-8-3MOE 1368
398047 89136 89147 CATCTTGTGAAA 1-10-1MOE 1369
336181 89145 89158 GTTTCAAACATCAT 3-8-3MOE 1370
397978 89147 89160 TAGTTTCAAACATC 2-10-2MOE 1371
398048 89148 89159 AGTTTCAAACAT 1-10-1MOE 1372
389969 89152 89163 GAATAGTTTCAA 1-10-1MOE 1373
389768 89152 89163 GAATAGTTTCAA 1-9-2MOE 1373
336182 89155 89168 CATTGGAATAGTTT 3-8-3MOE 1374
397979 89162 89175 CACTGAACATTGGA 2-10-2MOE 1375
398049 89163 89174 ACTGAACATTGG 1-10-1MOE 1376
390010 89165 89176 CCACTGAACATT 1-10-1MOE 1240
336183 89166 89179 CCGCCACTGAACAT 3-8-3MOE 1377
397980 94786 94799 CAGACCACAAACTG 2-10-2MOE 1378
398050 94787 94798 AGACCACAAACT 1-10-1MOE 1379
392060 94790 94803 CTGGCAGACCACAACytosine in the 2-10-2 methylene oxygen base BNA interval is not modified 1380
389970 94791 94802 TGGCAGACCACA 1-10-1MOE 1249
389769 94791 94802 TGGCAGACCACA 1-9-2MOE 1249
336185 94792 94805 AGCTGGCAGACCAC 3-8-3MOE 1381
397981 94798 94811 ACCTTTAGCTGGCA 2-10-2MOE 1382
398051 94799 94810 CCTTTAGCTGGC 1-10-1MOE 1220
336186 94803 94816 TCTTCACCTTTAGC 3-8-3MOE 1383
390012 94860 94871 TCAAAGTACATG 1-10-1MOE 1384
336187 94862 94875 GAACTCAAAGTACA 3-8-3MOE 1385
389971 94865 94876 GGAACTCAAAGT 1-10-1MOE 1386
389770 94865 94876 GGAACTCAAAGT 1-9-2MOE 1386
397982 94865 94878 AGGGAACTCAAAGT 2-10-2MOE 1387
398052 94866 94877 GGGAACTCAAAG 1-10-1MOE 1388
336188 94869 94882 GCTGAGGGAACTCA 3-8-3MOE 1389
336189 94888 94901 TCACCACACACAGG 3-8-3MOE 1390
336190 94904 94917 GAACTCTACTTTGA 3-8-3MOE 1391
389972 94909 94920 GAAGAACTCTAC 1-10-1MOE 1392
389771 94909 94920 GAAGAACTCTAC 1-9-2MOE 1392
397983 94910 94923 GTGGAAGAACTCTA 2-10-2MOE 1393
398053 94911 94922 TGGAAGAACTCT 1-10-1MOE 1394
336191 94915 94928 TGTTTGTGGAAGAA 3-8-3MOE 1395
336192 94925 94938 CATCTTGTTCTGTT 3-8-3MOE 1396
397984 97824 97837 AGTGAAACATTTTG 2-10-2MOE 1397
398054 97825 97836 GTGAAACATTTT 1-10-1MOE 1144
336194 97827 97840 AAAAGTGAAACATT 3-8-3MOE 1145
389973 97835 97846 TTACCCAAAAGT 1-10-1MOE 1398
389772 97835 97846 TTACCCAAAAGT 1-9-2MOE 1398
336195 97836 97849 TATTTACCCAAAAG 3-8-3MOE 1399
397985 97837 97850 GTATTTACCCAAAA 2-10-2MOE 1400
398055 97838 97849 TATTTACCCAAA 1-10-1MOE 1401
397986 97853 97866 TCCTGGTATGAAGA 2-10-2MOE 1402
336196 97853 97866 TCCTGGTATGAAGA 3-8-3MOE 1402
398056 97854 97865 CCTGGTATGAAG 1-10-1MOE 1403
390015 97857 97868 GGTCCTGGTATG 1-10-1MOE 1404
336197 97862 97875 TTCCTCTGGTCCTG 3-8-3MOE 1405
397987 97866 97879 AGGTTTCCTCTGGT 2-10-2MOE 1406
398057 97867 97878 GGTTTCCTCTGG 1-10-1MOE 1407
336198 97873 97886 TTTTCTGAGGTTTC 3-8-3MOE 1408
336199 97891 97904 AGACTTCCATTTTC 3-8-3MOE 1409
389974 97893 97904 AGACTTCCATTT 1-10-1MOE 1410
389773 97893 97904 AGACTTCCATTT 1-9-2MOE 1410
336200 97918 97931 CAAATGCTATCGAT 3-8-3MOE 1411
336201 97933 97946 GCACGCTCTATACT 3-8-3MOE 1412
389975 97934 97945 CACGCTCTATAC 1-10-1MOE 1413
389774 97934 97945 CACGCTCTATAC 1-9-2MOE 1413
336202 97948 97961 TCCTTGTCATTATC 3-8-3MOE 1414
397988 97990 98003 GCTTTGTCAAGATC 2-10-2MOE 1415
389976 97991 98002 CTTTGTCAAGAT 1-10-1MOE 1177
389775 97991 98002 CTTTGTCAAGAT 1-9-2MOE 1177
336203 97991 98004 TGCTTTGTCAAGAT 3-8-3MOE 1416
397989 98017 98030 AAGTATCGGTTGGC 2-10-2MOE 1417
336204 98017 98030 AAGTATCGGTTGGC 3-8-3MOE 1417
398058 98018 98029 AGTATCGGTTGG 1-10-1MOE 1418
336205 98032 98045 TTAAAATTTGGAGA 3-8-3MOE 1419
397990 98034 98047 CCTTAAAATTTGGA 2-10-2MOE 1420
389977 98035 98046 CTTAAAATTTGG 1-10-1MOE 1421
389776 98035 98046 CTTAAAATTTGG 1-9-2MOE 1421
336207 102230 102243 TCTACTGTTTTTGT 3-8-3MOE 1422
336208 102236 102249 GGCTCCTCTACTGT 3-8-3MOE 1423
335330 102251 102265 AGCCTCTGGATTTGA 1-10-4MOE 1424
335331 102252 102266 TAGCCTCTGGATTTG 1-10-4MOE 1426
336209 102252 102265 AGCCTCTGGATTTG 3-8-3MOE 1425
335377 102252 102266 TAGCCTCTGGATTTG1-10-4 methylene oxygen base BNA is a di-phosphate ester in the 3 ' pterion 1426
335376 102252 102266 TAGCCTCTGGATTTG1-10-4 methylene oxygen base BNA 1426
390577 102253 102266 TAGCCTCTGGATTTThe 1-10-3MOE cytosine is not modified 1427
T in the pterion is the 2-thio-thymine
335332 102253 102267 CTAGCCTCTGGATTT 1-10-4MOE 1429
386770 102253 102266 TAGCCTCTGGATTT 1-11-2MOE 1427
375560 102253 102267 CTAGCCTCTGGATTT 2-10-3MOE 1429
391449 102253 102267 CTAGCCTCTGGATTTThe 2-10-3MOE cytosine is not modified 1429
392055 102253 102267 CTAGCCTCTGGATTTCytosine in the 2-10-3MOE interval is not modified 1429
362977 102253 102268 GCTAGCCTCTGGATTT 2-12-2MOE 1428
371975 102253 102267 CTAGCCTCTGGATTT 3-10-2MOE 1429
386556 102253 102268 GCTAGCCTCTGGATTT 3-10-3MOE 1428
335341 102253 102268 GCTAGCCTCTGGATTT 3-10-3MOE 1428
335350 102253 102268 GCTAGCCTCTGGATTT 3-10-3MOE 1428
383739 102253 102268 GCTAGCCTCTGGATTT3-10-3MOE is a 5-methylcytosine in the interval 1428
390576 102253 102268 GCTAGCCTCTGGATTT3-10-3MOE at interval in for the T in the 5-methylcytosine pterion be the 2-thio-thymine 1428
390580 102253 102268 GCTAGCCTCTGGATTTPyrimidine in the 3-10-3MOE pterion is that the cytosine in the 5-thiazole interval is not modified 1428
390581 102253 102268 GCTAGCCTCTGGATTTCytosine in the 3-10-3MOE interval is not modified 1428
391096 102253 102268 GCTAGCCTCTGGATTT 3-10-3MOE 1428
391098 102253 102268 GCTAGCCTCTGGATTT 3-10-3MOE 1428
391863 102253 102268 GCTAGCCTCTGGATTTThe 3-10-3MOE cytosine is not modified 1428
384071 102253 102268 GCTAGCCTCTGGATTT3-10-3OMe is a 5-methylcytosine in the interval 1428
385036 102253 102268 GCTAGCCTCTGGATTTCytosine in 1-2-10-3 OMe/2 '-O-methyl-4 '-sulfo-/2 '-O-methyl-4 '-sulfo-pterion is not modified 1428
335368 102253 102268 GCTAGCCTCTGGATTTConnect key for di-phosphate ester in the 3-10-3 methylene oxygen base BNA pterion 1428
391864 102253 102268 GCTAGCCTCTGGATTTCytosine in the 3-10-3 methylene oxygen base BNA interval is not 1428
Modified
392054 102253 102267 CTAGCCTCTGGATTTCytosine in the 2-10-3 methylene oxygen base BNA interval is not modified 1429
391172 102253 102267 CTAGCCTCTGGATTTMethylene oxygen base BNA cytosine is not modified 1429
391865 102253 102268 GCTAGCCTCTGGATTT3-10-3 methylene oxygen base BNA cytosine is not modified 1428
391868 102253 102268 GCTAGCCTCTGGATTT1-2-10-3 (5 ' R)-5 '-methyl-methylene oxygen base BNA/ methylene oxygen base BNA/ (5 ' R)-5 '-methyl-methylene oxygen base BNA cytosine is not modified 1428
391869 102253 102268 GCTAGCCTCTGGATTT1-2-10-3 methylene oxygen base BNA/ (5 ' S)-5 '-methyl-methylene oxygen base BNA/ (5 ' S)-5 '-methyl-methylene oxygen base BNA cytosine is not modified 1428
384073 102253 102268 GCTAGCCTCTGGATTT3-10-3 methylene oxygen base BNA is a 5-methylcytosine in the interval 1428
335379 102253 102268 GCTAGCCTCTGGATTT3-10-3 methylene oxygen base BNA 1428
390579 102253 102268 GCTAGCCTCTGGATTT1-1-1-10-3MOE/4 ' sulfo-/2 '-O-[(2-methoxyl group) ethyl]-4 '-sulfo-/2 '-O-[(2-methoxyl group) ethyl] connect key for di-phosphate ester in the not modified pterion of cytosine in-4 '-sulfo-pterion 1428
390582 102253 102268 GCTAGCCTCTGGATTT1-2-10-3MOE/4 ' sulfo-/2 '-O-[(2-methoxyl group) ethyl] connect key for di-phosphate ester in the not modified pterion of cytosine in-4 '-sulfo-pterion 1428
390606 102253 102268 GCTAGCCTCTGGATTTCytosine in the 1-2-10-3 MOE/pentaF/pentaF pterion is a di-phosphate ester in the not modified pterion 1428
Lian Jian
384072 102253 102268 GCTA GCCTCTGGATTTCytosine in the 1-2-10-3 MOE/pentaF/pentaF pterion is not modified 1428
385871 102253 102268 GCTAGCCTCTGGATTT1-2-10-3OMe/ 2 '-O-[(2-methoxyl group) ethyl]-4 '-sulfo-/2 '-O-[(2-methoxyl group) ethyl] cytosine in-4 '-sulfo-pterion is not modified 1428
390607 102253 102268 GCTAGCCTCTGGATTTCytosine in the 3-10-3MOE/pentaF pterion is not modified 1428
390608 102253 102268 GCTAGCCTCTGGATTTCytosine in the 1-2-10-3 MOE/pentaF/pentaF pterion is not modified 1428
390609 102253 102268 GCTAGCCTCTGGATTTCytosine in the 3-10-2-1 MOE/MOE/pentaF pterion is not modified 1428
386682 102253 102268 GCTAGCCTCTGGATTT1-2-10-32 '-(butyl acetamido)-palmitamide/MOE/MOE 1428
391173 102253 102267 CTAGCCTCTGGATTT2-10-3 (5 ' R)-5 '-methyl-methylene oxygen base BNA cytosine is not modified 1429
391174 102253 102267 CTAGCCTCTGGATTT2-10-3 (5 ' S)-5 '-methyl-methylene oxygen base BNA cytosine is not modified 1429
386970 102254 102266 TAGCCTCTGGATT 1-10-2MOE 1432
390578 102254 102266 TAGCCTCTGGATTT in the not modified pterion of 1-10-2MOE cytosine is the 2-thio-thymine 1432
335333 102254 102268 GCTAGCCTCTGGATT 1-10-4MOE 1430
331429 102254 102267 CTAGCCTCTGGATT 2-10-2MOE 1431
335349 102254 102267 CTAGCCTCTGGATT 2-10-2MOE 1431
335367 102254 102267 CTAGCCTCTGGATTConnect key for di-phosphate ester in the 2-10-2 methylene oxygen base BNA pterion 1431
392061 102254 102267 CTAGCCTCTGGATTCytosine in the 2-10-2 methylene oxygen base BNA interval is not modified 1431
335378 102254 102267 CTAGCCTCTGGATT2-10-2 methylene oxygen base 1431
BNA
383991 102254 102266 TAGCCTCTGGATT1-10-2 2 '-(acetylaminohydroxyphenylarsonic acid butyl-acetamido)-cholesterol/MOE 1432
383992 102254 102266 TAGCCTCTGGATT1-10-2 2 '-(acetylaminohydroxyphenylarsonic acid butyl-acetamido)-cholic acid/MOE 1432
386683 102254 102266 TAGCCTCTGGATT1-10-2 5 ' terminal 2 '-(butyl acetamido)-palmitamide/MOE 1432
390614 102254 102266 TAGCCTCTGGATT 1-10-2PentaF 1432
389954 102255 102266 TAGCCTCTGGAT 1-10-1MOE 1434
335334 102255 102269 TGCTAGCCTCTGGAT 1-10-4MOE 1433
389777 102255 102266 TAGCCTCTGGAT 1-9-2MOE 1434
390430 102256 102268 GCTAGCCTCTGGAThe 1-10-2MOE cytosine is not modified 1163
390431 102256 102268 GCTAGCCTCTGGAC in the not modified pterion of 1-10-2MOE cytosine is 9-(amino ethoxy) phenoxazine 1163
390432 102256 102268 GCTAGCCTCTGGA 1-10-2MOE 1163
390433 102256 102268 GCTAGCCTCTGGAThe not modified Nt 6 of 1-10-2MOE cytosine is 9-(amino ethoxy) phenoxazine 1163
390434 102256 102268 GCTAGCCTCTGGAThe not modified Nt 7 of 1-10-2MOE cytosine is 9-(amino ethoxy) phenoxazine 1163
390435 102256 102268 GCTAGCCTCTGGAThe not modified Nt 9 of 1-10-2MOE cytosine is 9-(amino ethoxy) phenoxazine 1163
335335 102256 102270 CTGCTAGCCTCTGGA 1-10-4MOE 1435
335336 102257 102271 ACTGCTAGCCTCTGG 1-10-4MOE 1436
335337 102258 102272 AACTGCTAGCCTCTG 1-10-4MOE 1437
335338 102259 102273 GAACTGCTAGCCTCT 1-10-4MOE 1438
335339 102260 102274 TGAACTGCTAGCCTC 1-10-4MOE 1439
335340 102261 102275 TTGAACTGCTAGCCT 1-10-4MOE 1440
336210 102261 102274 TGAACTGCTAGCCT 3-8-3MOE 1441
397991 102264 102277 AGTTGAACTGCTAG 2-10-2MOE 1442
398059 102265 102276 GTTGAACTGCTA 1-10-1MOE 1443
390017 102268 102279 GAAGTTGAACTG 1-10-1MOE 1444
336211 102269 102282 ACAGAAGTTGAACT 3-8-3MOE 1445
397992 102293 102306 TCATTGTCACTAAC 2-10-2MOE 1446
336212 102293 102306 TCATTGTCACTAAC 3-8-3MOE 1446
398060 102294 102305 CATTGTCACTAA 1-10-1MOE 1447
389978 102301 102312 TCAGGTTCATTG 1-10-1MOE 1448
389778 102301 102312 TCAGGTTCATTG 1-9-2MOE 1448
336213 102303 102316 ATGATCAGGTTCAT 3-8-3MOE 1449
397993 102307 102320 TATAATGATCAGGT 2-10-2MOE 1450
398061 102308 102319 ATAATGATCAGG 1-10-1MOE 1451
336214 102314 102327 GAATATCTATAATG 3-8-3MOE 1139
390019 102320 102331 GTCAGAATATCT 1-10-1MOE 1173
397994 102322 102335 TGGTGTCA GAATAT 2-10-2MOE 1452
398062 102323 102334 GGTGTCAGAATA 1-10-1MOE 1255
336215 102326 102339 TCAGTGGTGTCAGA 3-8-3MOE 1453
336216 102339 102352 CTCTGGATCAGAGT 3-8-3MOE 1454
390020 102340 102351 TCTGGATCAGAG 1-10-1MOE 1149
336217 102349 102362 AAGGTTCATTCTCT 3-8-3MOE 1455
397995 102357 102370 TTCATCAAAAGGTT 2-10-2MOE 1456
389979 102358 102369 TCATCAAAAGGT 1-10-1MOE 1176
389779 102358 102369 TCATCAAAAGGT 1-9-2MOE 1176
336218 102358 102371 CTTCATCAAAA GGT 3-8-3MOE 1457
390021 102360 102371 CTTCATCAAAAG 1-10-1MOE 1458
336219 102366 102379 ATGCTGATCTTCAT 3-8-3MOE 1459
336220 102381 102394 TTTTGTAATTTGTG 3-8-3MOE 1460
336221 102387 102400 TCAGACTTTTGTAA 3-8-3MOE 1461
390022 102443 102454 CAGTTTATTCAA 1-10-1MOE 1142
397996 102477 102490 TGTCCTATTGCCAT 2-10-2MOE 1462
398063 102478 102489 GTCCTATTGCCA 1-10-1MOE 1205
397997 102487 102500 TCTGACACAATGTC 2-10-2MOE 1463
398064 102488 102499 CTGACACAATGT 1-10-1MOE 1464
397998 102505 102518 TGTTCCTATAACTG 2-10-2MOE 1465
398065 102506 102517 GTTCCTATAACT 1-10-1MOE 1466
397999 102528 102541 AAGATTGGTCAGGA 2-10-2MOE 1467
398066 102529 102540 AGATTGGTCAGG 1-10-1MOE 1468
398000 102561 102574 GTGTCAAAACCCTG 2-10-2MOE 1469
398067 102562 102573 TGTCAAAACCCT 1-10-1MOE 1210
390025 102563 102574 GTGTCAAAACCC 1-10-1MOE 1211
390026 102595 102606 AGCTACACAACC 1-10-1MOE 1470
398001 102596 102609 CACAGCTACACAAC 2-10-2MOE 1471
398068 102597 102608 ACAGCTACACAA 1-10-1MOE 1472
398002 102607 102620 TATATACATGACAC 2-10-2MOE 1473
398069 102608 102619 ATATACATGACA 1-10-1MOE 1474
390027 102612 102623 AGGTATATACAT 1-10-1MOE 1206
398003 102637 102650 AATTTTAAATGTCC 2-10-2MOE 1475
398070 102638 102649 ATTTTAAATGTC 1-10-1MOE 1476
390028 102648 102659 TCCTAATTGAAT 1-10-1MOE 1477
390029 102667 102678 AAAGTGCCATCT 1-10-1MOE 1478
398004 102689 102702 TTTATAAAACTGGA 2-10-2MOE 1479
398071 102690 102701 TTATAAAACTGG 1-10-1MOE 1480
390030 102691 102702 TTTATAAAACTG 1-10-1MOE 1074
398005 102827 102840 TGCAAACTTATCTG 2-10-2MOE 1481
398072 102828 102839 GCAAACTTATCT 1-10-1MOE 1482
390033 102836 102847 AGCCAACTGCAA 1-10-1MOE 1483
398006 102837 102850 CTTAGCCAACTGCA 2-10-2MOE 1484
398073 102838 102849 TTAGCCAACTGC 1-10-1MOE 1485
398007 103069 103082 AGCACCAATATGCT 2-10-2MOE 1247
398074 103070 103081 GCACCAATATGC 1-10-1MOE 1248
398008 103267 103280 TAAATCATTGTCAA 2-10-2MOE 1486
398075 103268 103279 AAATCATTGTCA 1-10-1MOE 1233
398009 103327 103340 GCACTGGCCTTGAT 2-10-2MOE 1487
398076 103328 103339 CACTGGCCTTGA 1-10-1MOE 1488
390041 103332 103343 TTAGCACTGGCC 1-10-1MOE 1489
390047 103585 103596 TGTGTAAGGTCA 1-10-1MOE 1490
390049 103636 103647 GTTAATGACATT 1-10-1MOE 1491
390050 103660 103671 GTATTCAAGTAA 1-10-1MOE 1140
390052 103780 103791 GACAATTTCTAC 1-10-1MOE 1492
390054 103862 103873 AACACTGCACAT 1-10-1MOE 1493
Salt, prodrug and bioequivalence thing (bioequivalent)
Antisense compounds provided herein comprises the salt of the acceptable salt of any medicine, ester or this ester, perhaps any other functionalized chemical equivalent, this equivalent can (directly or indirectly) provide bioactive metabolites or its residue when comprising people's animal.Therefore, for example, present disclosure specification also relates to the drug acceptable salt and the other biological equivalent of the prodrug of antisense compounds and drug acceptable salt, this prodrug.
Term " prodrug " expression is with the healing potion of non-activity or the preparation of low activity form, and it is being converted to activity form (being medicine) under the effect of endogenous enzyme, chemical substance and/or condition in the middle of health or the soma.Specifically, according to disclosed method among WO 93/24510 or the WO94/26764, the prodrug version of oligonucleotide is to prepare as SATE ((S-acetyl-2-sulfur ethyl) phosphate ester) derivant.Prodrug can comprise that also one or both ends wherein comprise the antisense compounds of such nuclear base, and described nuclear base can be cut (for example connecting key by locating to mix phosphodiester backbone endways) to produce reactive compound.In certain embodiments, one or more non-drug moieties cut down to produce activity form from prodrug.In some this embodiment, this non-drug moiety is not nucleotide or oligonucleotide.
Term " drug acceptable salt " refers to can accept and the acceptable salt of medicine on the physiology of chemical compound described herein, is promptly keeping the required biological activity of parent compound not give the salt of unwanted toxicology effect again to parent compound.The sodium salt of antisense oligonucleotide is suitable for, and is widely accepted to be used for the mankind are carried out the therapeutic administration.
In certain embodiments, also provide the salt of double-strandednucleic acid (including but not limited to the dsRNA chemical compound), include but not limited to sodium salt.
G. some drugs compositions
In certain embodiments, pharmaceutical composition of the present invention comprises one or more short antisense compounds and one or more excipient.In some this embodiment, excipient is selected from water, saline solution, alcohol, Polyethylene Glycol, gelatin, lactose, amylase, magnesium stearate, Pulvis Talci, silicic acid, viscous paraffin (viscous paraffin), hydroxy methocel and polyvinylpyrrolidone.
In certain embodiments, pharmaceutical composition of the present invention prepares with known technology, and described known technology includes but not limited to mixing, dissolving, pelletize, makes dragee (dragee-making), grinds (levigating), emulsifying, encapsulation, embedding or tablet forming technique.
In certain embodiments, pharmaceutical composition of the present invention is liquid (for example suspensoid, elixir and/or a solution).In some this embodiment, composition of liquid medicine is to assign to prepare with one-tenth well known in the art, and described composition includes but not limited to water, glycerol, oil, alcohol, correctives, antiseptic and coloring agent.
In certain embodiments, pharmaceutical composition of the present invention is solid (for example tablet and/or a capsule).In some this embodiment, the solid composite medicament that comprises one or more oligonucleotide is to assign to prepare with one-tenth well known in the art, and described composition includes but not limited to starch, saccharide, diluent, granulating agent, lubricant, binding agent and disintegrating agent.
In certain embodiments, pharmaceutical composition of the present invention is to prepare as depot formulation (depotpreparation).Some this depot formulation is more more long-acting than non-depot formulation usually.In certain embodiments, this preparation is by implanting (for example subcutaneous or intramuscular) or giving by intramuscular injection.In certain embodiments, depot formulation is to prepare with suitable polymeric material or hydrophobic material (for example emulsion in acceptable oil) or ion exchange resin, perhaps is prepared into the indissoluble derivant, for example is prepared into the salt of indissoluble.
In certain embodiments, pharmaceutical composition of the present invention comprises delivery system.The example of delivery system includes but not limited to liposome and emulsion.Some delivery system can be used for preparing the some drugs compositions, comprises that those comprise the pharmaceutical composition of hydrophobic compound.In certain embodiments, use some organic solvent such as dimethyl sulfoxine.
In certain embodiments, pharmaceutical composition of the present invention comprises one or more tissue specificities and sends molecule, and the described molecule of sending is designed to one or more drug delivery of the present invention to specific tissue or cell type.For example, in certain embodiments, pharmaceutical composition comprises the liposome that is coated with tissue specificity antibody.
In certain embodiments, pharmaceutical composition of the present invention comprises the cosolvent system.Some this cosolvent system comprises for example benzylalcohol, non-polar surfactant, water miscibility organic polymer and water.In certain embodiments, this cosolvent system is used to hydrophobic compound.This cosolvent west carry can a limiting examples be VPD cosolvent system, it is the ethanol solution that comprises 3%w/v benzylalcohol, 8%w/v non-polar surfactant polysorbate Tween 80 TM and 65%w/v Liquid Macrogol.Each ratio of this cosolvent system be can change considerably, and don't the dissolubility and the toxicity characteristic of system changed.In addition, also can change each cosolvent composition itself, for example, can use other surfactants to replace the polysorbate Tween 80; Can change the classification size (fraction size) of Polyethylene Glycol; The other biological compatible polymer can replace Polyethylene Glycol, for example polyvinylpyrrolidone; Other saccharides or polysaccharide can replace dextrose.
In certain embodiments, pharmaceutical composition of the present invention comprises slow-released system.A limiting examples of this slow-released system is the semi-permeable substrate that the solid hydrophobic polymer is made.In certain embodiments, depend on its chemical characteristic, slow-released system can be at several hrs, several days, several week or some months release medicine in the time.
In certain embodiments, preparation of pharmaceutical compositions of the present invention becomes for orally give.In some this embodiment, pharmaceutical composition is to prepare by one or more oligonucleotide and one or more drug acceptable carriers are made up.Some this carrier can make pharmaceutical composition can be mixed with tablet, pill (pill), dragee (dragee), capsule, liquid agent, gel, syrup, serosity agent, suspensoid etc., for the oral absorption of experimenter.In certain embodiments, medicinal composition for oral administration obtains by oligonucleotide and one or more solid excipients are mixed.Suitable excipient includes but not limited to filler such as saccharide, comprises lactose, sucrose, mannitol or Sorbitol; Cellulosics, for example corn starch, wheaten starch, rice fecula, potato starch, gelatin, Tragacanth, methylcellulose, hydroxypropyl emthylcellulose, sodium carboxymethyl cellulose and/or polyvinylpyrrolidone (PVP).In certain embodiments, this mixture is optional is ground and the optional auxiliary substance that adds.In certain embodiments, pharmaceutical composition is formed to obtain tablet or dragee core (core).In certain embodiments, add disintegrating agent (for example crospolyvinylpyrrolidone, agar or alginic acid or its salt such as sodium alginate).
In certain embodiments, coating is provided for sugar-coat alkyl core.In some this embodiment, can use concentrated sugar solution, it can be chosen wantonly and comprise arabic gum, Pulvis Talci, polyvinylpyrrolidone, carbopol gel, Polyethylene Glycol and/or titanium dioxide, lacquer solution and appropriate organic solvent or solvent mixture.Dyestuff or pigment can be added to tablet or dragee coating.
In certain embodiments, medicinal composition for oral administration is push style (push-fit) capsule of being made by gelatin.Some this push style capsule comprises one or more medicaments of the present invention and blended with it one or more filleies such as lactose, adhesive such as starch and/or lubricant such as Pulvis Talci or magnesium stearate and optional stabilizing agent.In certain embodiments, medicinal composition for oral administration is the soft seal capsule of being made by gelatin and plasticizer such as glycerol or Sorbitol.In some soft capsule, one or more medicaments of the present invention are dissolved or be suspended in the suitable liquid, and described liquid is fatty oil (fatty oil), liquid paraffin or liquid macrogol for example.Can add stabilizing agent in addition.
In certain embodiments, preparation of pharmaceutical compositions becomes for oral administration (buccaladministration).Some this pharmaceutical composition is tablet or the lozenge of preparing in a usual manner.
In certain embodiments, preparation of pharmaceutical compositions becomes for injection to give (for example intravenous, subcutaneous, intramuscular injection etc.).In some this embodiment, pharmaceutical composition comprises carrier and preparation in liquid, aqueous, and the buffer of described liquid, aqueous for example water or physical compatibility is as Hanks solution, Ringer's solution or normal saline buffer solution.In certain embodiments, also comprise other compositions (for example help dissolved composition or serve as the composition of antiseptic).In certain embodiments, injectable suspensions is to wait with suitable liquid-carrier, suspending agent to prepare.Some medicinal composition for injections is to present with unit dosage form, for example presents in ampoule or in multi-dose container.Some medicinal composition for injections is suspensoid, solution or the Emulsion in oil-containing or water-bearing media, and can comprise blender (formulatory agent) as suspending agent, stabilizing agent and/or dispersant.Some is applicable to that the solvent of medicinal composition for injections includes but not limited to lipophilic solvent and fatty oil such as Oleum sesami, Acrawax such as ethyl oleate or triglyceride and liposome.Moisture injection suspension can comprise the material of the viscosity that can improve suspensoid, as sodium carboxymethyl cellulose, Sorbitol or glucosan.Randomly, this suspensoid also can comprise suitable stabilizers, and the dissolubility that perhaps can improve medicament is so that the material of the highly spissated solution of preparation.
In certain embodiments, preparation of pharmaceutical compositions becomes for saturating mucosa to give.In some this embodiment, the penetrating agent that will be suitable for barrier to be infiltrated is used for preparation.This penetrating agent is well known in the art.
In certain embodiments, preparation of pharmaceutical compositions becomes for sucking to give.Some this inhaled medication compositions is the form preparation with the aerosol spray (aerosol spray) in pressurized package (pressurized pack) or nebulizer (nebulizer).Some this pharmaceutical composition comprises propellant, for example dichlorodifluoromethane, Arcton 11, dichlorotetra-fluoroethane, carbon dioxide or other suitable gas.In certain embodiments, use pressurized aerosol, can determine dosage unit with the valve of transmissibility metered amount (metered amount).In certain embodiments, can prepare capsule and the medicine-storing tube (cartridge) that uses in inhaler (inhaler) or insufflator (insufflator).Some this preparation comprises medicament of the present invention and the suitable powder binder such as the mixture of powders of lactose or starch.
In certain embodiments, preparation of pharmaceutical compositions becomes for rectum to give, as suppository or enema,retention.Some this pharmaceutical composition comprises known composition, as cocoa butter and/or other glyceride.
In certain embodiments, preparation of pharmaceutical compositions becomes for topical administration.Some this pharmaceutical composition comprises gentle humidification base material, as ointment (ointment) or emulsifiable paste (cream).Exemplary suitable ointment base material includes but not limited to that vaseline, vaseline add volatile silicone, lanoline and water-in-oil emulsion such as EucerinTM(can be available from Beiersdorf, Cincinnati, Ohio).Exemplary suitable emulsifiable paste base material includes but not limited to Nivea CreamTM(can be available from Beiersdorf, Cincinnati, Ohio), cold cream (cold cream, USP), Purpose CreamTM(can be available from Johnson ﹠amp; Johnson, New Brunswick, N.J.), hydrophilic ointment (USP) and LubridermTM(can be available from Pfizer, Morris Plains, N.J.).
In certain embodiments, pharmaceutical composition of the present invention comprises the oligonucleotide for the treatment of effective dose.In certain embodiments, this treatment effective dose is enough to prevent, alleviate or improves the symptom of disease or prolong the experimenter's who is treated survival period.Determining fully in those skilled in the art's limit of power of treatment effective dose.
In certain embodiments, the short antisense compounds of one or more the present invention is prepared as prodrug.In certain embodiments, when giving in vivo, prodrug is chemically converted on the biology, has more active short antisense compounds form on the medicine or in the treatment.In certain embodiments, prodrug is suitable for, because they give than corresponding activity form is easier.For example, in some cases, prodrug may have more bioavailability (for example passing through orally give) than corresponding activity form.In some cases, prodrug is compared dissolubility with corresponding activity form improvement.In certain embodiments, the water solublity of prodrug is lower than corresponding activity form.In some cases, this prodrug can pass cell membrane better, because be deleterious for mobility at water solublity in the cell membrane.In certain embodiments, prodrug is an ester.In some this embodiment, ester is hydrolyzed into carboxylic acid by metabolism when giving.In some cases, the chemical compound that contains carboxylic acid is corresponding activity form.In certain embodiments, prodrug comprises and the bonded small peptide of acid groups (polyamino acid).In some this embodiment, this peptide is cut when giving and forms corresponding activity form.
In certain embodiments, prodrug is to produce like this: pharmaceutical active compounds is modified, made can be reproduced when this reactive compound gives in vivo.Prodrug can be designed to change the metabolic stability or the transhipment feature of medicine, can cover side effect or toxicity, can improve the taste of medicine or can change other features or the characteristic of medicine.Those skilled in the art are by the knowledge of drug effect dynamic process and drug metabolism in the relevant body, if know certain pharmaceutical active compounds, the prodrug that just can design this chemical compound is (referring to for example Nogrady (1985) Medicinal Chemistry A Biochemical Approach, Oxford University Press, New York, pages 388-392).
In certain embodiments, comprise disease or the sufferer that the pharmaceutical composition of one or more medicaments of the present invention can be used for treating (particularly among the people experimenter) in the mammal.Suitable route of administration includes but not limited to following mode: in oral, internal rectum, saturating mucosa, enteral (intestinal), enteral (enteral), part, suppository, suction, the sheath, in the ventricle, intraperitoneal, intranasal, ophthalmic and parenteral (for example intravenous, intramuscular, bone marrow are interior and subcutaneous).In certain embodiments, give the interior medicine (pharmaceutical intrathecals) of sheath to realize part rather than systemic exposure.For example, can be with the pharmaceutical composition direct injection in the zone of required effect (for example at kidney or heart area).
In certain embodiments, lacking antisense compounds compares with its parent oligonucleotide and is particularly suitable for orally give.In certain embodiments, short antisense compounds is more suitable in orally give than its parent oligonucleotide, improves because they compare usefulness with its parent oligonucleotide.In certain embodiments, short antisense compounds is more suitable in orally give than its parent oligonucleotide, but has better stability availability or dissolubility property because they are compared with its parent oligonucleotide.
In yet another aspect, medicament is aseptic lyophilizing oligonucleotide, and available suitable diluent such as sterile water for injection carry out rehydration.The product of rehydration gives as subcutaneous injection liquid or as venoclysis liquid after being diluted in the saline.The oligonucleotide that freeze dried drug products comprised is to prepare with water for injection, and transfers to pH 7.0-9.0, lyophilizing then with acid or alkali in preparation process.Freeze dried oligonucleotide can be the oligonucleotide of 25-800mg.Will be appreciated that this contains 25,50,75,100,125,150,175,200,225,250,275,300,325,350,375,425,450,475,500,525,550,575,600,625,650,675,700,725,750,775 and the lyophilizing oligonucleotide of 800mg.Freeze dried drug products can be packaged in the 2mL I type clear glass bottle (handling through ammonium sulfate), clogs with the brombutyl rubber stopper, and uses aluminum FLIP-Closedtop (overseal) sealing.
Compositions of the present invention can comprise other routines in addition and be present in auxiliary element in the pharmaceutical composition, and the consumption of these compositions is levels that this area has been established.Therefore, for example, compositions can comprise other compatible pharmaceutically active material, as pruritus, astringent, local anesthetic or antiinflammatory, the material that perhaps can comprise the other various dosage forms that can be used for the physics preparation present composition is as dyestuff, correctives, antiseptic, antioxidant, opacifier, thickening agent and stabilizing agent.But this material is not answered the biological activity of each composition of the excessive interference present composition when adding.Preparation can be sterilized, and can mix with auxiliary agent if needed, described auxiliary agent is lubricant, antiseptic, stabilizing agent, wetting agent, emulsifying agent, the salt in order to influence osmotic pressure, buffer agent, coloring agent, correctives and/or aromatic substance etc. for example, and disadvantageous interaction can not take place with the oligonucleotide in the preparation these auxiliary agents.
Antisense compounds provided herein also can mix with other molecule, molecular structure or compound mixture, encapsulation, put together or otherwise associate.
This paper also describes is the pharmaceutical composition and the preparation of the antisense compounds that comprises that this paper provides.Pharmaceutical composition can give in many ways, and this depends on and need carry out topical therapeutic or whole body therapeutic and depend on the zone that will treat.In a preferred embodiment, be lung surface topical administration particularly on the surface of respiratory tract, for example spray into, suck or be blown into powder or aerosol gives by per os and/or nose.
The pharmaceutical preparation described herein that can present with unit dosage form expediently can be prepared according to the known routine techniques of medicine industry.This technology comprises makes each active component and pharmaceutical carrier or excipient that bonded step take place.In general, preparation is like this preparation: each active component and liquid-carrier, micro-solid carrier or the two are combined equably and closely, and words if necessary are to product be shaped (for example being configured as specific granular size so that send) then.In a preferred embodiment, pharmaceutical preparation is to be prepared in appropriate solvent (for example water or normal saline) for pulmonary administration, perhaps be mixed with sterile preparation, wherein carrier or other materials make the drop can form required diameter, for sending with device with inhaler, intranasal delivery device, nebulizer and other pulmonary delivery.Perhaps, pharmaceutical preparation can be mixed with dry powder, for using in Diskus.
" pharmaceutical carrier " or " excipient " can be in order to one or more delivery of nucleic acids are gone up inert media to medicine acceptable solvent, suspending agent or any other pharmacology of individuality, and they are well known in the art.Excipient can be a liquid or solid, will carry out in conjunction with the administering mode of being planned its selection, and making to provide the bulkiness and the denseness of abbreviation when other compositions of itself and nucleic acid and given pharmaceutical composition make up.
H. some treatment is used
In certain embodiments, antisense compounds is used for regulate the expression of the target gene in the animal (as the people).In certain embodiments, this chemical compound can be used to treat metabolic disease or regulates one or more disease indications.For example, described method comprises that the antisense compounds with the expression that can regulate target gene of effective dose gives described needs treatment this step with the animal of this target gene diseases associated or disease.The antisense compounds that can effectively regulate the expression of target RNA or protein expression product provided herein is considered to active antisense compounds.Active antisense compounds also comprises one or more the chemical compound that can effectively regulate in numerous disease indications, and described disease indication comprises metabolic disease or cardiovascular disease indication, and the example is described hereinafter.
The adjusting of the expression of target gene can measure in body fluid (may contain or not contain cell), tissue or the organ of this animal.Obtaining the method for sample for analysis such as body fluid (for example saliva, serum, urine), tissue (for example biopsy) or organ and prepare sample for the method for analyzing, is well known to a person skilled in the art.The analytical method of RNA and protein level is discussed hereinbefore, and is well known to a person skilled in the art.The effect of treatment can be assessed like this: by routine clinical method known in this field, measure and express relevant biological marker or disease indication with target gene from above-mentioned body fluid, tissue or organ that the animal that has contacted one or more chemical compounds described herein is collected.These biological markers include but not limited to liver transaminase, bilirubin, albumin, blood urea nitrogen, creatine and other kidneys and liver function sign; Adhesion molecule, c-proteins C reactive, chemotactic factor, cytokine and other inflammation signs in interleukin, tumor necrosis factor, the born of the same parents.
Antisense compounds provided herein can be added to suitable medicine by certain chemical compound with effective dose and can accept in the diluent or carrier and use in pharmaceutical composition.The carrier and the diluent of science and technology hands are well known to a person skilled in the art.The selection of diluent or carrier will be decided according to a plurality of factors, includes but not limited to the dissolubility and the route of administration of chemical compound.These Considerations are well known to those skilled in the art.In one aspect, antisense compounds described herein can suppress the expression of target gene.Described chemical compound also can be used for making in order to the medicine of treatment with target gene diseases associated or disease.
Also be susceptible to so that the method that body fluid, organ or tissue contact with the antisense compounds that one or more this paper provides or the compositions of effective dose.Body fluid, organ or tissue can be contacted with one or more chemical compounds, thereby cause the target gene in the cell in body fluid, the organ or tissue to express adjusted.Effective dose can be measured like this: with the method that technical staff's routine is known, monitor antisense compounds or the compositions regulating action to target nucleic acids or its product, thereby be measured to effective dose.
Give altogether
In certain embodiments, two or more antisense compounds are given altogether.In certain embodiments, pharmaceutical composition comprises antisense compounds (particularly oligonucleotide) and one or more targeting second nucleic acid target target antisense compounds of one or more targeting first nucleic acid.In these antisense compounds one or more can be short antisense compounds.In certain embodiments, pharmaceutical composition comprises two or more antisense compounds of the same nucleic acid target target of targeting zones of different.In this antisense compounds one or more can be short antisense compounds.Two or more chemical compounds of combining can use or sequential use simultaneously.
In certain embodiments, other medicament of one or more pharmaceutical compositions and one or more is given altogether.In certain embodiments, described one or more other medicament be designed to its disease for the treatment of or disease identical with one or more pharmaceutical compositions of the present invention.In certain embodiments, described one or more other medicament be designed to its disease for the treatment of or disease different with one or more pharmaceutical compositions of the present invention.In certain embodiments, described one or more other medicament is designed to treat the ill effect of one or more pharmaceutical compositions of the present invention.In certain embodiments, one or more pharmaceutical compositions of the present invention and another medicament are given altogether, to treat the ill effect of this another medicament.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is given simultaneously.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is given at different time.In certain embodiments, other medicament of one or more pharmaceutical compositions of the present invention and one or more is prepared together in single dosage form.In certain embodiments, with other separately preparation of medicament of one or more pharmaceutical compositions of the present invention and one or more.
In certain embodiments, can comprise that lipid reduces medicament with the medicament that pharmaceutical composition of the present invention gives altogether.In some this embodiment, can include but not limited to atorvastatin, simvastatin, rosuvastatin with the medicament that pharmaceutical composition of the present invention gives altogether and according to Ezetimibe.In some this embodiment, lipid is reduced medicament give before the pharmaceutical composition of the present invention giving.In some this embodiment, lipid is reduced medicament after giving pharmaceutical composition of the present invention, give.In some this embodiment, lipid is reduced medicament when giving pharmaceutical composition of the present invention, give.In some this embodiment, the dosage that the lipid that gives altogether reduces medicament is identical with the dosage that gives separately to be given when lipid reduces medicament.In some this embodiment, the dosage that the lipid that gives altogether reduces medicament is lower than the dosage that is given when giving lipid reduction medicament separately.In some this embodiment, the dosage that the lipid that gives altogether reduces medicament is higher than the dosage that is given when giving lipid reduction medicament separately.
In certain embodiments, it is the HMG-CoA reductase inhibitor that the lipid that gives altogether reduces medicament.In some this embodiment, the HMG-CoA reductase inhibitor is an inhibin.In some this embodiment, inhibin is selected from atorvastatin, simvastatin, pravastatin, fluvastatin and rosuvastatin.In certain embodiments, it is cholesterol absorption inhibitor that the lipid that gives altogether reduces medicament.In some this embodiment, cholesterol absorption inhibitor is according to Ezetimibe.In certain embodiments, it is HMG-CoA reductase inhibitor and cholesterol absorption inhibitor formulated together altogether that the lipid that gives altogether reduces medicament.In some this embodiment, it is according to Ezetimibe/simvastatin that lipid formulated together altogether reduces medicament.In certain embodiments, it is microsomal triglyceride transfer protein inhibitor (MTP inhibitor) that the lipid that gives altogether reduces medicament.
In certain embodiments, the medicament that gives altogether is a bile acid chelating agent.In some this embodiment, bile acid chelating agent is selected from colestyramine, colestipol and colesevelam.
In certain embodiments, the medicament that gives altogether is a nicotinic acid.In some this embodiment, nicotinic acid is selected from rapid release nicotinic acid, extended release nicotinic acid and slow release nicotinic acid.
In certain embodiments, the medicament that gives altogether is a Carboxymethylcellulose.In some this embodiment, Carboxymethylcellulose is selected from gemfibrozil, fenofibrate, chlorine Bei Te, bezafibrate and ciprofibrate.
More examples of the medicament that can give altogether with pharmaceutical composition of the present invention include but not limited to corticosteroid (including but not limited to prednisone); Immunoglobulin (includes but not limited to vein immunoglobulin (IVIg); Analgesic (for example acetaminophen); Antiinflammatory (including but not limited to NSAID (non-steroidal anti-inflammatory drug) (for example ibuprofen, COX-1 inhibitor and cox 2 inhibitor)); Salicylate; Antibiotic; Antiviral agent; Antifungal; Antidiabetic medicine (for example biguanide, glucosidase inhibitor, insulin, sulfonylureas and thiazolidinediones); The adrenergic modulation agent; Diuretic; Hormone (for example short anabolism steroid, androgen, estrogen, calcitonin, progesterone, somatostatin and thyroxin); Immunomodulator; Muscle relaxant; Hydryllin; Osteoporosis medicament (for example diphosphonate, calcitonin and estrogen); Prostaglandin; Antineoplastic agent; The spiritual healing medicament; Tranquilizer; Poison Oak Tree (oak) or black poison wood (sumac) product; Antibody and vaccine.
In certain embodiments, pharmaceutical composition of the present invention can be reduced therapy in conjunction with lipid gives.In some this embodiment, it is that curative life style changes that lipid reduces therapy.In some this embodiment, it is the LDL Apheresis that lipid reduces therapy.
I. test kit, research reagent and diagnosis
Antisense compounds provided herein can be used for diagnosis and uses as research reagent and test kit (kit).In addition, can specific inhibition of gene expression or the regulator gene antisense compounds of expressing, often be used for explaining the function of specific gene by the technical staff, perhaps be used for distinguishing each member's of certain biological approach function.
For the use in test kit and diagnosis, antisense compounds as herein described can be combined individually or with other chemical compounds or healing potion, as the instrument of difference and/or fabric analysis, with explaination cell and certain part of the central gene of expressing of tissue or the expression pattern of whole complementary series (entire complement).The method of gene expression analysis is well known to a person skilled in the art.
J. lack some advantage of antisense compounds
In certain embodiments, lacking antisense compounds compares with its parent oligonucleotide and has advantage.For example, in certain embodiments, short antisense compounds to the affinity of target nucleic acids greater than its parent oligonucleotide.In certain embodiments, the external usefulness of lacking antisense compounds is higher than its parent oligonucleotide.In some this embodiment, the external usefulness of this raising can not be explained by the affinity that improves fully.In certain embodiments, the external usefulness of this raising is attributable to that short antisense compounds infiltrates the raising of the ability in the cell and/or near the raising of the ability of the target nucleic acids in the cell.In certain embodiments, lack that usefulness is higher than its parent oligonucleotide in the body of antisense compounds.In certain embodiments, the interior usefulness of this higher body is not owing to the raising of external usefulness or the improve of affinity.In certain embodiments, short antisense compounds is compared with its parent oligonucleotide, and usefulness is much larger than according to the external usefulness or the usefulness that can predict according to affinity in the body that it had.In certain embodiments, in the body of this raising usefulness be attributable to the raising of bioavailability, cytotropic infiltration better, in case enter behind the cell to target nucleic acids near better or other factors.
In certain embodiments, can expect that the specificity that short antisense compounds and its parent oligonucleotide compare its target nucleic acids is lower.In some this embodiment, can expect that short antisense compounds can cause side effect to increase, comprise that the potential of toxic action may.In certain embodiments, do not observe this other side effect.In certain embodiments, the specific combinative non-target nucleic acids of short antisense compounds can not can touch for short antisense compounds.In this embodiment, comprise side-effect problem the lacking of toxicity than expection.
In certain embodiments, because short antisense compounds is less, their unlikely conjugated proteins.In some this embodiment, this less protein bound causes toxicity lower, because protein bound can cause undesired consequence.In certain embodiments, this less protein bound causes usefulness higher, has more antisense compounds can supply the performance therapeutical effect because this makes.In certain embodiments, less protein bound causes the toxic reduction of drug-drug interactions.
Non-limiting disclosure and being attached to herein by reference
In conjunction with some embodiment some chemical compound as herein described, compositions and method are specifically described, but following examples are only in order to illustrating chemical compound as herein described, and are not intended to and limit these chemical compounds.The list of references of quoting among the application, GenBank searching number etc., its each all by reference integral body be attached to herein.
Embodiment 1
Cell culture and handle with short antisense compounds
The effect that short antisense compounds is expressed target nucleic acids can be tested in any of the cell line in multiple cultivation or former generation.Cell line can be available from the source that can openly obtain, as American Type Culture Collection (ATCC, Manassas, VA).Cell is cultivated according to method known to a person of ordinary skill in the art.
When cell reached suitable degree of being paved with, by specification used
Figure A20078002541603141
Handle cell with oligonucleotide.When cell reaches 65-75% degree of being paved with, handle cell with oligonucleotide.With oligonucleotide with
Figure A20078002541603142
Invitrogen Life Technologies, Carlsbad is CA) at Opti-
Figure A20078002541603143
(Invitrogen LifeTechnologies, Carlsbad mix in CA) low blood serum medium, to reach required oligonucleotide concentration and 2.5 or 3 μ g/mL/100nM oligonucleotide
Figure A20078002541603144
Concentration.With this transfection mixture about 0.5 hour of incubation at room temperature.For the cell of in 96 orifice plates, growing, with each hole with 100 μ L OPTI-
Figure A20078002541603145
Washing is once handled with the transfection mixture of 130 μ L then.For the cell of in the tissue culturing plate of 24 orifice plates or other standards, growing, carry out similar processing with the culture medium and the oligonucleotide of proper volume.Repeating twice or three times handles cell and collects data.After handling about 4-7 hour under 37 ℃, contain the culture medium of transfection mixture with the fresh culture displacement.Harvesting after oligonucleotide is handled 16-24 hour.
The use control oligonucleotide is measured the best oligomeric compounds concentration for specific cells system.In addition, when test in oligomeric compounds screening experiment or phenotype test during oligomeric compounds, also parallel testing control oligonucleotide.
Used oligonucleotide concentration is different with the difference of cell line.For measuring the best oligonucleotide concentration for specific cells system, handle cell with the positive control oligonucleotide of a plurality of concentration.The positive control oligonucleotide concentration that will cause 80% of target mRNA to suppress then, as in the subsequent experimental of this cell line to the screening concentration of new oligonucleotide.Do not suppress if reach 80%, then will cause the 60% positive control oligonucleotide least concentration that suppresses of target mRNA, as the screening of the oligonucleotide in the subsequent experimental of this cell line concentration.Do not suppress if reach 60%, think that then this specific cells system is not suitable for the oligonucleotide transfection experiment.The concentration of antisense oligonucleotide used herein is when this antisense oligonucleotide is 50nM-300nM during with the liposome reagent transfection, when antisense oligonucleotide is 1nM-40nM during by electroporation transfection.
Embodiment 2: the real-time quantitative PCR analysis of target mRNA level
Target mRNA level quantitatively be to use ABI
Figure A20078002541603151
7600,7700 or 7900Sequence Detection System (PE-Applied Biosystems, Foster City CA) finish by real-time quantitative PCR according to manufacturer's description.
Before carrying out quantitative PCR, assessment earlier has the ability of specific primer-probe groups and GAPDH amplified reaction " multiple carry out (multiplexed) " to measured target gene.Carry out in regular turn reverse transcription (RT) reaction and PCR in real time after RNA separates, two reactions are all carried out in identical hole.RT and PCR reagent available from Invitrogen Life Technologies (Carlsbad, CA).RT, PCR in real time are in identical hole, by with 20 μ L PCR mixture (cocktail) (2.5x PCR buffer (decrement MgCl2) (buffer minus MgCl2), 6.6mM MgCl2, dATP, dCTP, dCTP and the dGTP of each 375 μ M, the forward primer of each 375nM and reverse primer, the probe of 125nM, 4 RNA of unit enzyme inhibitors, 1.25 units
Figure A20078002541603152
Taq, 5 MuLV of unit reverse transcription and 2.5xROX dyestuff) be added to and carry out in 96 orifice plates that contain 30 μ L total rna solutions (20-200ng).The RT reaction is to carry out in 30 minutes at 48 ℃ of following incubations.Activated in 10 minutes at 95 ℃ of following incubations
Figure A20078002541603153
Behind the Taq, carry out 40 cyclic two step PCR schemes: 95 ℃, 15 seconds (degeneration), 60 ℃ then, 1.5 minutes (annealing/extension).
The gene target quantity that obtains by RT, PCR in real time is with following dual mode normalization: use the expression normalization of GAPDH (a kind of its express constant gene), perhaps by usefulness
Figure A20078002541603154
(OR) quantitatively total RNA comes normalization for Molecular Probes, Inc.Eugene.It is by moving simultaneously with target, multiplely carry out (multiplexing) or carry out (separately) separately, coming to be undertaken quantitative by RT, PCR in real time that GAPDH expresses.Total RNA uses
Figure A20078002541603161
(Molecular Probes, Inc.Eugene OR) carry out quantitatively the RNA quantitative reagent.
With 170 μ L's
Figure A20078002541603162
Work reagent (
Figure A20078002541603163
Reagent is diluted in 10mM Tris-HCl at 1: 350,1mM EDTA, pH 7.5) pipette in 96 orifice plates of the cell RNA that contains 30 μ L purification.This plate exists
Figure A20078002541603164
Carry out reading with 485nm excitation wavelength and 530nm emission wavelength among 4000 (the PE Applied Biosystems).
GAPDH PCR probe have with 5 ' terminal covalently bound JOE and with 3 ' terminal covalently bound TAMRA or MGB, wherein JOE is a fluorescence report dyestuff, TAMRA or MGB are the quencher dyestuffs.In some cell types, use to measuring GAPDH and express from the primer of the GAPDH sequential design of different plant species and probe.For example, personnel selection GAPDH primer and probe groups measurement are spread out from cell and the expression of the GAPDH in the cell line of monkey.
Probe that PCR in real time is used and primer are designed to use conventional method and target nucleic acids hybridization.For example conventionally use
Figure A20078002541603165
(CA) software designs probe and the primer that PCR in real time is used for Applied Biosystems, Foster City.The example of the target nucleic acids that hybridize primer and probe sequence and they provides in table 24.Target specific PCR probe have with 5 ' terminal covalently bound FAM and with 3 ' terminal covalently bound TAMRA or MGB, wherein FAM is a fluorescent dye, TAMRA or MGB are the quencher dyestuffs.
Table 24
The target Auele Specific Primer and the probe that are used for PCR in real time
The target titleSpeciesSequence typeSequence (5 '-3 ')SEQID NO
ApoBMiceForward primer CGTGGGCTCCAGCATTCTA 1524
ApoBMiceReverse primer AGTCATTTCTGCCTTTGCGTC 1525
ApoBMiceProbe CCAATGGTCGGGCACTGCTCAA 1526
ApoBMiceForward primer GAAAATAGACTTCCTGAATAACTATGCATT 1527
ApoBMiceReverse primer ACTCGCTTGCCAGCTTGC 1528
ApoBMiceProbe TTTCTGAGTCCCCGTGCCCAACA 1529
GCGRMiceForward primer TGAGCCTTGCCACCTTCTCT 1530
GCGRMiceReverse primer GCGCACCCCAGCCAA 1531
GCGRMiceProbe AGAGGAGCTTCTTTTCCCTCTACCTGGGC 1532
GCGRMiceForward primer ATTTCCTGCCCCTGGTACCT 1533
The target titleSpeciesSequence typeSequence (5 '-3 ') SEQ ID NO
GCGRMiceReverse primer CGGGCCCACACCTCTTG 1534
GCGRMiceProbe CCACAAAGTGCAGCACCGCCTAGTGT 1535
PTENMiceForward primer GCCACAGGCTCCCAGACAT 1536
PTENMiceReverse primer TCCATCCTCTTGATATCTCCTTTTG 1537
PTENMiceProbe ACAGCCATCATCAAAGAGATCGTTAGCAGAA 1538
PTENMiceForward primer ATGACAATCATGTTGCAGCAATTC 1539
PTENMiceReverse primer CGATGCAATAAATATGCACAAATCA 1540
PTENMiceProbe CTGTAAAGCTGGAAAGGGACGGACTGGT 1541
Embodiment 3: targeting ApoB nucleic acid and have 2 '-MOE or methylene oxygen base (4 '-CH2-O-2 ') the short antisense compounds of BNA modification
Give six ages in week male Balb/c mice (Jackson Laboratory, Bar Harbor, the ME) antisense compounds of peritoneal injection (i.p.) targeting ApoB, weekly twice, continuous three weeks.Antisense compounds dosage comprises 2.4,1.2,0.6,0.3 and 0.15 μ mol/kg.For the antisense compounds of 14 nucleotide of length, these dosage equal about 12,6,3,1.5 or 0.75mg/kg respectively.Shown in the table 25 is the sequence and the die body of antisense compounds used in this research.The length of these antisense compounds is 20 or 14 nucleotide, has central authorities' " at interval " zone that 10 2 '-deoxyribonucleotides are formed, and the interval region both sides are connected to 2 '-O-methoxy ethyl (" pterion " that 2 '-MOE) the wing or BNA modify.For example, 2-10-2MOE gapmer die body represents to have the interval of 10 nucleotide, both sides are connected to the antisense compounds in the 2 nucleotide pterions of modifying with 2 '-MOE at interval.The black matrix residue is represented 2 '-O-methoxy ethyl part, and the italic residue is represented methylene oxygen base (4 '-CH2-O-2 ') BNAs.Connecting key between the nucleoside of each chemical compound all is thiophosphate.All cytosine residues of ISIS 147764 and ISIS 372938 are all replaced by 5-methylcytosine.For ISIS 387462, only there is the cytosine residue in the chemical compound pterion to be replaced by 5-methylcytosine.The ApoB-100 sequence that ApoB antisense compounds targeting can openly obtain comprises Genbank searching number XM_137955.5 (SEQ ID NO:2).
Table 25: the antisense compounds of targeting ApoB nucleic acid
ISIS NOTarget SEQ ID NO5 ' target siteSequence (5 '-3 ')The Gapmer die body SEQ ID NO
147764 2 8865 GTCCCTGAAGATGTCAATGC 5-10-5MOE 1561
ISISNOTarget SEQ ID NO5 ' target siteSequence (5 '-3 ')The Gapmer die body SEQ ID NO
372938 2 8235 GGTACATGGAAGTC 2-10-2MOE 190
387462 2 8235 GGTACATGGAAGTC2-10-2 methylene oxygen base (4 '-CH2-O-2’) BNA 190
Inject the last time and put to death mice in back 48 hours, with assessment transaminase's (table 26); Liver and kidney weight (table 27); Triglyceride, LDL, HDL and free fatty acid levels (table 28); Target mRNA level (table 29) in the liver; Target proteins matter level in the blood plasma; With oligonucleotide tissue concentration (table 30).These terminal points (endpoint) are to measure with method described herein and known to a person of ordinary skill in the art.
Table 26:ALT and AST level (IU/L)
ISIS NODosage μ mol/kg ALT AST
Saline N/A 27.8 46.3
147764 2.4 29.5 64.0
372938 2.4 26.0 49.0
372938 1.2 24.8 49.5
372938 0.6 28.0 79.3
372938 0.3 28.3 60.0
372938 0.15 28.3 50.3
387462 2.4 41.3 84.0
387462 1.2 35.3 63.5
387462 0.6 32.0 77.3
387462 0.3 27.8 55.0
387462 0.15 29.3 68.3
Table 27: liver and kidney weight (accounting for the percent of saline control)
ISIS NODosage μ mol/kgLiverKidney
Saline N/A 100 100
147764 2.4 102 105
372938 2.4 100 100
372938 1.2 90 101
372938 0.6 96 112
ISIS NODosage μ mol/kgLiverKidney
372938 0.3 91 107
372938 0.15 96 98
387462 2.4 116 90
387462 1.2 113 90
387462 0.6 106 97
387462 0.3 101 126
387462 0.15 95 100
Handle between the animal saline treatment animal or oligonucleotide, TBW and food consumption quantity do not have significant difference.Glucose level between all processed group is also similar.
Table 28: triglyceride (TRIG), T-CHOL (CHOL), HDL, LDL and free fatty (FFA) level
ISIS NODosage μ mol/kg TRIG (mg/dL) CHOL (mg/dL) HDL (mg/dL) LDL (mg/dL) FFA (mg/dL)
Saline N/A 167 107 81.8 11.0 1.76
147764 2.4 167 107 81.3 10.3 1.29
372938 2.4 153 104 79.0 10.3 1.28
372938 1.2 136 101 77.8 9.5 1.70
372938 0.6 184 110 83.3 10.8 1.66
372938 0.3 138 109 84.3 11.0 1.53
372938 0.15 151 106 82.8 10.8 1.57
387462 2.4 49 14 9.0 1.5 0.74
387462 1.2 71 23 16.5 2.0 0.76
387462 0.6 150 55 39.3 3.7 1.43
387462 0.3 136 92 72.8 7.5 1.14
387462 0.15 163 104 81.5 9.3 1.47
Table 29:%ApoB mRNA level (with respect to saline control)
ISIS NO 2.4 μmol/kg 1.2 μmol/kg 0.6 μmol/kg 0.3 μmol/kg 0.15 μmol/kg
147764 57.7 ND ND ND ND
372938 77.0 90.0 87.3 92.6 93.1
387462 1.5 8.5 27.4 58.9 75.8
Caused the remarkable and dose dependent of triglyceride, T-CHOL, HDL, LDL and free fatty to descend with ISIS 387462 processing.Find according to these phenotypes, handle the ApoB mRNA (table 29) that also caused in the mice plasma and the dose dependent decline of protein (not shown) level with ISIS387462.For determining at methylene oxygen base (4 '-CH2-O-2 ') whether the viewed efficient raising of BNA gapmer is because due to the increase of oligonucleotide accumulation, has measured total length and total oligonucleotide concentration in liver and the kidney.
Table 30: total length and total antisense compounds tissue concentration (μ M), with respect to ApoB mRNA level
(accounting for the percent of saline saline control)
ISIS NODosage μ mol/kgThe kidney total lengthThe liver total lengthKidney is totalLiver is total ApoB mRNA
147764 2.4 28.6 22.9 33.5 31.3 58
372938 2.4 32.0 5.49 34.0 7.76 77
387462 2.4 37.2 5.69 38.9 7.31 1.5
387462 1.2 29.8 3.71 31.3 4.91 8.5
387462 0.6 18.9 1.97 20.0 2.57 27
387462 0.3 9.11 0.73 9.49 0.78 59
387462 0.15 6.97 0.19 7.43 0.24 76
The level of 2-10-2 methylene oxygen base (4 '-CH2-O-2 ') BNA gapmer is similar with 2-10-2 MOE gapmer to 5-10-5 in kidney, but significantly reduces in liver.The EC of ISIS387462 in liver50Compare to determine by inhibition with oligonucleotide concentration in the liver and ApoBmRNA.The EC of ISIS 38746250Be approximately 1 μ M.Contrast therewith, the effectively EC of 5-10-5MOE gapmer chemical compound in liver50Be generally 15 μ M.
These results prove to have methylene oxygen base (4 '-CH generally in the pterion2-O-2 ') the short gapmer of ApoB is the potent inhibitor that target mRNA expresses, effectively triglyceride reducing, cholesterol and free fatty.As if the usefulness of short antisense compounds is not the result that tissue accumulation increases, because with respect to 5-10-5 MOE gapmer, observing this chemical compound has similar level in kidney, the level in liver lowers.In addition, methylene oxygen base (4 '-CH2-O-2 ') BNA gapmer seldom shows and even does not show adverse side effect.
Embodiment 4: targeting GCGR nucleic acid and have the short antisense compounds that 2 '-MOE modifies
By peritoneal injection give eight age in week the C57/BL6 mice (Jackson Laboratory, Bar Harbor, ME) the GCGR oligonucleotide of single dose, concentration is 6.25,12.5,25 or 50mg.Each dosage group has four mices.Shown in the table 31 is sequence, die body and the conjugate that is used for the GCGR antisense compounds of this research.The runic residue is represented 2 '-O-methoxy ethyl (2 '-MOE) part.All chemical compounds all are to comprise between the thiophosphate nucleoside to connect key without exception, and each cytosine is replaced by 5-methylcytosine.ISIS 386626, ISIS 386627 and ISIS 386628 also comprise by diamides and connect key (2 '-OCH2C (=O) N (H) (CH2)4N (H) C (=O)-(CH2)15CH3) with the C that is connected of 2 '-O position of sugar16Conjugated group.The GCGR sequence that GCGR antisense compounds energy targeting has been announced comprises
Figure A20078002541603211
Searching number BC031885.1 (SEQ ID NO:7) is interior.
Table 31: the short antisense compounds of targeting GCGR nucleic acid
ISIS NOTarget SEQ ID NO5 ' target siteSequence (5 '-3 ')The Gapmer die bodyConjugate SEQ ID NO
148364 7 393 TGCACTTTGTGGTACCAAGG 5-10-5 MOEDo not have 1562
386626 7 1768 GC16CTTCTCCATCATA 2-10-2 MOE C16 1563
386627 7 1244 GC16GGCATGCTCGTCA 2-10-2 MOE C16 653
386593 7 1244 GGGCATGCTCGTCA 2-10-2 MOEDo not have 649
386628 7 1680 TC16GTCTTGCTGCTTT 2-10-2 MOE C16 1564
386594 7 1680 TGTCTTGCTGCTTT 2-10-2 MOEDo not have 1565
Put to death mice in back 48 hours in injection, to measure serum transaminase level (table 32); Liver white adipose tissue (WAT), spleen and kidney weight (table 33); Triglyceride and glucose level (table 34); GCGR mRNA level (table 35-41); And the total length in liver and the kidney and total oligonucleotide concentration (table 42).These terminal points are to assess with method described herein and known to a person of ordinary skill in the art.Include the data of handling preceding blood-letting (Pre-Bleed) and handling back blood-letting (Post-Bleed) in.
Table 32:ALT﹠amp; AST level (IU/L)
ISIS NODosage (mg/kg) ALT Pre-Bleed ALT Post-Bleed AST Pre-Bleed AST Post-Bleed
Saline N/A 36 51 55 85
148364 50 24 40 40 115
148364 25 26 35 42 87
148364 12.5 23 32 44 69
148364 6.25 28 34 47 76
386626 50 28 40 48 120
386626 25 30 36 44 92
386626 12.5 28 34 44 90
386626 6.25 26 42 46 69
386627 50 27 457 42 451
386627 25 29 97 45 142
386627 12.5 29 62 46 81
386627 6.25 23 87 38 96
386593 50 23 33 46 58
386593 25 25 32 41 95
386593 12.5 26 33 43 74
386593 6.25 28 31 43 53
386628 50 28 68 44 76
386628 25 24 32 40 57
386628 12.5 28 35 42 75
386628 6.25 22 29 40 59
386594 50 29 34 46 92
386594 25 27 31 47 82
386594 12.5 28 33 45 74
386594 6.25 23 48 42 67
Table 33: organ weight's (accounting for the percent of saline control)
ISIS NODosage (mg/kg)Liver WATKidneySpleen
Saline N/A 100 100 100 100
148364 50 103 80 108 123
148364 25 103 75 112 115
148364 12.5 100 84 108 96
148364 6.25 101 89 104 113
386626 50 112 77 104 130
386626 25 109 97 103 120
386626 12.5 96 73 97 114
386626 6.25 100 90 100 95
ISIS NODosage (mg/kg)Liver WATKidneySpleen
386627 50 90 113 102 165
386627 25 99 87 99 143
386627 12.5 109 93 102 136
386627 6.25 103 96 102 131
386593 50 96 98 102 118
386593 25 83 94 100 104
386593 12.5 99 82 101 129
386593 6.25 96 77 98 144
386628 50 104 100 99 126
386628 25 102 97 109 113
386628 12.5 101 111 99 114
386628 6.25 98 106 102 151
386594 50 90 80 99 131
386594 25 93 76 99 128
386594 12.5 94 98 100 113
386594 6.25 102 85 101 119
Generally speaking, the GCGR antisense compounds seldom shows or does not show fully adverse side effect.
Table 34: triglyceride (TRIG), cholesterol (CHOL) and glucose level (IU/L)
ISIS NODosage (mg/kg) TRIG Pre-Bleed TRIG Post-Bleed CHOL Pre-Bleed CHOL Post-BleedGlucose Pre-BleedGlucose Post-Bleed
Saline N/A 132 181 91 96 208 285
148364 50 110 177 81 94 207 228
148364 25 115 200 83 96 219 239
148364 12.5 106 179 85 89 198 256
148364 6.25 86 162 86 89 226 215
386626 50 87 163 79 57 239 179
386626 25 100 187 87 72 235 186
386626 12.5 100 148 82 76 232 185
386626 6.25 86 162 85 90 222 221
386627 50 106 120 83 126 227 150
386627 25 101 148 90 115 218 203
386627 12.5 99 203 86 98 237 219
386627 6.25 111 165 88 104 238 228
386593 50 130 128 100 95 244 213
386593 25 119 135 83 77 206 208
386593 12.5 122 128 83 79 222 233
386593 6.25 120 138 84 78 214 219
386628 50 102 98 88 95 209 232
386628 25 102 129 84 85 210 223
386628 12.5 90 123 90 94 231 240
386628 6.25 117 121 83 85 228 229
386594 50 93 99 84 85 203 274
ISIS NODosage (mg/kg) TRIG Pre-Bleed TRIG Post-Bleed CHOL Pre-Bleed CHOL Post-BleedGlucose Pre-BleedGlucose Post-Bleed
386594 25 106 94 90 86 219 272
386594 12.5 118 133 85 95 200 292
386594 6.25 112 146 78 94 222 275
GCGR 2-10-2MOE gapmer demonstrates the trend that trends towards blood-letting triglyceride levels after the low processing for 5-10-5MOE gapmer, and wherein ISIS 386628 and ISIS 386594 have maximum dose dependent effect.After handling with ISIS 386626 and ISIS386627, glucose level also descends in the dose dependent mode.Handle the decline that also mainly causes handling back blood-letting glucose level with ISIS386628, ISIS 386593 and ISIS 386594.As if cholesterol levels do not have significant difference throughout between the reason group.
For whether the phenotype variation shown in more than determining is relevant with the reduction of GCGR mRNA, assess the level of target mRNA in liver by method described herein to being subject to processing animal by PCR in real time.What table 35 and 41 showed is the direct comparative result of the antisense compounds of targeting GCGR nucleic acid to the effect of target expression.The result represents with the percent that accounts for saline control.
Table 35: with the GCGR mRNA level after ISIS 148364 and ISIS 386626 processing
ISIS NO 50mg/kg 25mg/kg 12.5mg/kg 6.25mg/kg
148364 36 79 87 62
386626 0 8 3 7
Table 36: with the GCGR mRNA level after ISIS 148364 and ISIS 386627 processing
ISIS NO 50mg/kg 25mg/kg 12.5mg/kg 6.25mg/kg
148364 63 87 105 86
386627 3 30 57 74
Table 37: with the GCGR mRNA level after ISIS 148364 and ISIS 386593 processing
ISIS NO 50mg/kg 25mg/kg 12.5mg/kg 6.25mg/kg
148364 56 74 105 86
386593 9 38 74 90
Table 38: with the GCGR mRNA level after ISIS 148364 and ISIS 386628 processing
ISIS NO 50mg/kg 25mg/kg 12.5mg/kg 6.25mg/kg
148364 42 77 98 101
386628 2 18 53 77
Table 39: with the GCGR mRNA level after ISIS 148364 and ISIS 386594 processing
ISIS NO 50mg/kg 25mg/kg 12.5mg/kg 6.25mg/kg
148364 59 98 102 96
386594 25 47 50 96
Table 40: with the GCGR mRNA level after ISIS 386627 and ISIS 386593 processing
ISIS NO 50mg/kg 25mg/kg 12.5mg/kg 6.25mg/kg
386627 5 40 58 42
386593 10 29 34 71
Table 41: with the GCGR mRNA level after ISIS 386628 and ISIS 386594 processing
ISIS NO 50mg/kg 25mg/kg 12.5mg/kg 6.25mg/kg
386628 4 13 38 97
386594 19 50 56 99
Handling the remarkable dose dependent that has caused GCGR mRNA to express with 2-10-2MOE gapmer descends.ISIS 386626 demonstrates maximum target mRNA and descends.For determining whether improve in the observed efficient of short antisense compounds is because due to the increase of antisense compounds accumulation, measured the total antisense compounds concentration in liver and the kidney.
Table 42: the summation total length antisense compounds concentration (μ g/g) in liver and the kidney
ISIS NOTotal kidneyTotal liverThe total length kidneyThe total length liver
148364 90 54 58 46
386626 757 274 355 125
ISIS NOTotal kidneyTotal liverThe total length kidneyThe total length liver
386593 91 12 77 12
386628 496 286 305 202
Result shown in the table 42 proves, comprises C16The short antisense compounds of conjugate is presented at the remarkable increase that all occurs the antisense compounds accumulation in liver and the kidney.But for the ISIS 386593 that can effectively reduce target mRNA, triglyceride and glucose level, the accumulating level in liver is similar to 5-10-5 MOE gapmer, and accumulating level is lower in kidney.Though these results suggest are and C16Binding energy improve liver and kidney antisense compounds concentration, but this and not exclusively be the reason that causes the effectiveness of short antisense compounds.
These results prove that generally the short antisense compounds of GCGR can significantly suppress target mRNA expresses, and goes back triglyceride reducing and glucose level simultaneously.In addition, except ISIS386627, each short MOE gapmer seldom shows and even does not show toxic action.
Embodiment 5: targeting GCGR nucleic acid and have 2 '-MOE and methylene oxygen base (4 '-CH2-O-2 ') the short antisense compounds of BNA modification
By intraperitoneal (i.p.) injection give eight ages in week male C57/BL6 mice (JacksonLaboratory, Bar Harbor, ME) the GCGR antisense compounds of single dose, concentration is 10,3.2,1 and 0.32 μ mol/kg.Each dosage group has four mices.Shown in the table 43 is sequence, die body and the conjugate that is used for the GCGR antisense compounds of this research.The runic residue represents that (2 '-MOE) modifies 2 '-O-methoxy ethyl, and the italic residue is represented methylene oxygen base (4 '-CH2-O-2 ') BNA modifies.All antisense compounds all are to comprise between the thiophosphate nucleoside to connect key without exception, and each cytosine is replaced by 5-methylcytosine.The GCGR nucleic acid that GCGR antisense compounds energy targeting has been announced comprises Genbank searching number BC031885.1 (SEQID NO:7).
Table 43: the antisense compounds of targeting GCGR nucleic acid
ISIS NOTarget SEQ ID NO5 ' target siteSequence (5 '-3 ')The Gapmer die body SEQ ID NO
148364 7 393 TGCACTTTGTGGTACCAAGG 5-10-5MOE 1562
396144 7 1768 GCTTCTCCATCATA 2-10-2MOE 1566
396148 7 1768 GCTTCTCCATCATA2-10-2 methylene oxygen base (4 '-CH2-O-2’) BNA 1567
396145 7 1765 ATGGCTTCTCCATCATATCC 5-10-5MOE 1568
396146 7 1244 GGGCATGCTCGTCA 2-10-2MOE 650
396149 7 1244 GGGCATGCTCGTCA2-10-2 methylene oxygen base (4 '-CH2-O-2’) BNA 652
396147 7 1241 CTTGGGCATGCTCGTCAGTC 5-10-5MOE 1569
For whether the phenotype variation shown in more than determining is relevant with the reduction of GCGR mRNA, assess the level of target mRNA in liver by method described herein to being subject to processing animal by RT, PCR in real time.What table 44 showed is the direct comparative result of the antisense compounds of targeting GCGR nucleic acid to the effect of target expression.The result represents with the percent that accounts for saline control.
Table 44:GCGRmRNA level
ISIS NO. 0.32μmol/kg 1μmol/kg 3.2μmol/kg 10μmol/kg
148364 105 106 73 38
396144 122 117 40 35
396148 20 6 2 1
396145 nd Nd 33 8
396146 98 135 95 35
396149 91 41 30 7
396147 nd Nd 68 28
Shown in table 44, each has methylene oxygen base (4 '-CH2-O-2 ') the short antisense compounds of BNA modification shows that all the dose dependent of GCGR mRNA level reduces.In addition, these short antisense compounds more can cause target to reduce than 5-10-5MOE gapmer effectively.Each comprises methylene oxygen base (4 '-CH in the pterion2-O-2 ') the short antisense compounds of BNA all causes GCGR albumen for saline control and ISIS 148364 processing remarkable decline to be arranged.Then, calculate the estimation ED of each antisense compounds with Graphpad Prism50Concentration; ED50Be the dosage when observing 50%mRNA decline.The result shows in following table 45.
Table 45: the ED of estimation50Concentration
The Gapmer die body ISIS NO ED50(μmole/kg) ED50(mg/kg)
5-10-5MOE 148364 7 50.6
2-10-2MOE 396144 4 18.1
2-10-2 methylene oxygen base BNA 396148 0.1 0.4
5-10-5MOE 396145 2.1 9.3
2-10-2MOE 396146 8.3 40
2-10-2 methylene oxygen base BNA 396149 1.1 5
5-10-5MOE 396147 5.2 37.5
Embodiment 6: targeting PTEN nucleic acid and have methylene oxygen base (4 '-CH2-O-2 ') the short antisense compounds of BNA modification
Give six ages in week male Balb/c mice (Jackson Laboratory, Bar Harbor ME) give single intraperitoneal injection PTEN antisense compounds, and dosage is 8 μ mol/kg.Each dosage group has four mices.Shown in the table 46 is sequence and the die body that is used for the PTEN antisense compounds of this research.The runic residue represents that (2 '-MOE), the italic residue is represented methylene oxygen base BNA nucleotide to 2 '-O-methoxy ethyl part.Each antisense compounds all is to comprise thiophosphate to connect key without exception.In addition, in the interval of ISIS 384073 and the cytosine residue in the pterion of ISIS 392056, ISIS 392057, ISIS 392061 and ISIS 392063 replaced by 5-methylcytosine.The PTEN nucleic acid that antisense compounds energy targeting has been announced comprises Genbank searching number U92437.1 (SEQ ID NO:13).
Table 46: the antisense compounds of targeting PTEN nucleic acid
ISIS NOTarget SEQ ID NO5 ' target siteSequence (5 '-3 ')The Gapmer die body SEQ ID NO
141923Contrast N/A CCTTCCCTGAAGGTTCCTCC 5-10-5MOE 1570
116847 29 2011 TCAAATCCAGAGGCTAGCAG 5-10-5MOE 1571
384073 29 2013 AAATCCAGAGGCTAGC3-10-3 methylene oxygen base (4 '-CH2-O-2’)BNA 1428
391172 29 2013 AAATCCAGAGGCTAG2-10-3 methylene oxygen base (4 '-CH2-O-2’)BNA 1429
ISIS NOTarget SEQ ID NO5 ' target siteSequence (5 '-3 ')The Gapmer die body SEQ ID NO
392056 29 140 AGCTGCAGCCATGA2-10-2 methylene oxygen base (4 '-CH2-O-2’)BNA 1263
392057 29 807 GGTCCAGGGCCAAG2-10-2 methylene oxygen base (4 '-CH2-O-2’)BNA 1162
392061 29 2014 AATCCAGAGGCTAG2-10-2 methylene oxygen base (4 '-CH2-O-2’)BNA 1431
392063 29 3099 AGGCCAGTGCTAAG2-10-2 methylene oxygen base (4 '-CH2-O-2’)BNA 1226
Mice was put to death in injection in back 72 hours, with according to program as herein described and known to a person of ordinary skill in the art, measured serum transaminase level (table 47); Liver and spleen weight (table 47); And the PTEN mRNA level (table 48) in liver, kidney and the fat.
Table 47: transaminase level and organ weight
ISIS NO AST (IU/L) ALT (IU/L)Liver weight (accounting for the percent of saline control)Spleen weight (accounting for the percent of saline control)
Saline 98.5 37.5 100 100
141923 89.5 34.8 101 108
116847 59.8 29.5 109 108
384073 57.8 29.3 115 111
391172 48.5 32.8 120 112
392056 516 892 125 167
392057 63.8 34.5 125 101
392061 189 42.0 123 111
392063 67.3 21.8 127 134
Generally speaking, have methylene oxygen base (4 '-CH2-O-2 ') the short antisense compounds of BNA modification seldom shows and even does not show untoward reaction.In addition, TBW does not have significant difference between the reason group throughout.
Table 48: the %PTEN mRNA level in liver, kidney and the fat
ISIS NOLiverKidneyFat
Saline 100 100 100
141923 102 133 118
116847 37 96 85
384073 24 74 77
391172 18 63 101
392056 27 88 74
ISIS NOLiverKidneyFat
392057 33 79 96
392061 24 61 85
392063 6.5 52 72
Shown in table 48, the target mRNA level that the antisense compounds of each targeting PTEN nucleic acid all causes comparing with the control treatment animal in the liver with saline treatment significantly reduces.Antisense compounds is various to the effect of the target mRNA level in kidney and the fat.
Embodiment 7: targeting PTEN nucleic acid and have the short antisense compounds that BNA modifies
Give six ages in week male Balb/c mice (Jackson Laboratory, Bar Harbor ME) give single intraperitoneal (i.p.) injection targeting PTEN the antisense compounds of nucleic acid, and dosage is 8,4,2 or 1 μ mol/kg.Each dosage group has four mices.Shown in the table 49 is sequence, pterion chemical constitution and the die body that is used for each antisense compounds of this research.The runic residue represents that tilted letter is represented methylene oxygen base (4 '-CH through the nucleotide of 2 '-MOE modification2-O-2 ') BNA modifies.All antisense compounds all are to comprise thiophosphate in each position to connect key.Methylene oxygen base (4 '-CH of each cytosine of ISIS116847 and ISIS 3920632-O-2 ') the cytosine residue in the BNA pterion is substituted by 5-methylcytosine, and methylene oxygen base (4 '-CH of ISIS 3927452-O-2 ') thymidine in the BNA pterion is substituted by the 5-methylthymidine.The PTEN nucleic acid that antisense compounds energy targeting has been announced comprises Genbank searching number U92437.1 (SEQID NO:13).
Table 49: the antisense compounds of targeting PTEN nucleic acid
ISIS NOTarget SEQ ID NOThe target siteSequence (5 '-3 ')The Gapmer die body SEQ ID NO
116847 13 2011 TCAAATCCAGAGGCTAGCAG 5-10-5 MOE 1571
392063 13 3099 CTTAGCACTGGCCT2-10-2 methylene oxygen base BNA 1226
392745 13 3099 CTTAGCACTGGCCTThe 2-10-2 methylene 1226
ISIS NOTarget SEQ ID NOThe target siteSequence (5 '-3 ')The Gapmer die body SEQ ID NO
Oxygen base BNA
Mice was put to death in injection in back 72 hours, to measure serum transaminase level (table 50); Liver, kidney and spleen weight (table 50); PTEN mRNA level (table 51) in the liver; And the ED that estimates50Oligonucleotide concentration (table 52).These terminal points are to measure with method described herein and known to a person of ordinary skill in the art.
Table 50:AST, ALT and bilirubin level and organ weight
ISIS NODosage μ mol/kg AST (IU/L) ALT (IU/L)Bilirubin (mg/dL)Liver weight (accounting for the percent of saline control)Kidney weight (accounting for the percent of saline control)Spleen weight (accounting for the percent of saline control)
Saline N/A 64.0 31.8 0.15 100 100 100
116847 8 73.0 32.0 0.1 114 92 106
392063 8 50.3 17.3 0.1 115 98 115
392063 4 100.8 31.3 0.15 122 94 116
392063 2 60.5 32.8 0.1 112 99 106
392063 1 57.5 29.3 0.1 104 95 107
392745 8 75.5 23.5 0.13 125 99 100
392745 4 77.0 29.3 0.13 121 100 96
392745 2 69.0 32.0 0.13 110 98 103
392745 1 52.0 27.3 0.1 109 97 104
Generally speaking, the PTEN antisense compounds does not demonstrate significant toxicity sign.Kidney, liver and spleen weight are all in normal range.TBW does not have significant difference between the reason group throughout.
Table 51: the %PTEN mRNA level (with respect to saline control) in the liver
ISIS NO 8μmol/kg 4 μmol/kg2μmol/kg 1μmol/kg
11684 7 36 ND ND ND
39206 7.4 16 32 60
ISIS NO 8 μmol/kg 4 μmol/kg 2 μmol/kg 1μmol/kg
3
39274 5 5.2 11 31 60
Shown in table 51, each has methylene oxygen base (4 '-CH2-O-2 ') the short antisense compounds of BNA modification shows that all the dose dependent of PTEN mRNA level reduces.In addition, these short antisense compounds more can cause target to reduce than 5-10-5MOE gapmer effectively.After the dosage with 8 μ mol/kg gives each antisense compounds, also measured the pten protein level in the liver.Each comprises methylene oxygen base (4 '-CH in the pterion2-O-2 ') the short antisense compounds of BNA all causes pten protein for saline control and ISIS 116847 processing remarkable reduction to be arranged.Then, calculate the estimation ED of each oligonucleotide with Graphpad Prism50Concentration.The result shows in following table 52.
Table 52: the ED of estimation50Concentration
The pterion chemical constitution ISIS NO ED50(μmole/kg) ED50(mg/kg)
MOE (band 5-MeC) 116847 6.3 45.2
Methylene oxygen base BNA (band 5-MeC) 392063 1.3 5.8
Methylene oxygen base BNA 392745 1.2 5.6
Be the further dissimilar dicyclic ring acid compound of research, designed the short antisense compounds of another group targeting PTEN nucleic acid and test.Give six ages in week male Balb/c mice (Jackson Laboratory, Bar Harbor ME) give single intraperitoneal (i.p.) injection antisense compounds, and dosage is 8,4,2 or 1 μ mol/kg.Each dosage group has four mices.Shown in the table 53 is sequence, pterion chemical constitution and the die body that is used for each antisense compounds of this research.All antisense compounds all are to comprise thiophosphate in each position to connect key.Methylene oxygen base (4 '-CH of ISIS3920632-O-2 ') the cytosine residue in the BNA pterion is substituted by 5-methylcytosine.The PTEN nucleic acid that antisense compounds energy targeting has been announced comprises Genbank searching number U92437.1 (SEQ ID NO:13).
Table 53: the antisense compounds of targeting PTEN nucleic acid
ISIS NOTarget SEQ ID NO5 ' target siteSequence (5 '-3 ')The Gapmer die body SEQ ID NO
392063 29 3099 CTTAGCACTGGCCT2-10-2 methylene oxygen base BNA 1226
396564 29 3099CTTAGCACTGGCCT2-10-2 oxygen base amino (4 '-CH2-N(R)-O-2’) BNA 1226
396006 29 3099 CTTAGCACTGGCCT2-10-2 α-L-methylene oxygen base BNA 1226
Mice was put to death in injection in back 72 hours, with according to method as herein described and known to a person of ordinary skill in the art, measured serum transaminase level (table 54); Liver and spleen weight (table 54); And the PTEN mRNA level (table 55) in the liver.
Table 54:AST and ALT level and organ weight
ISIS NODosage μ mol/g AST (IU/L) ALT (IU/L)Liver weightSpleen weight
Saline N/A 71 33 100 100
392063 8 97 38 118 103
392063 4 179 36 115 107
392063 2 67 32 109 116
392063 1 68 27 102 105
396564 8 67 25 100 104
396564 4 96 30 102 106
396564 2 68 27 100 119
396564 1 79 39 97 109
396006 8 56 28 110 104
396006 2 139 36 97 105
Table 55: the %PTEN mRNA level (with respect to saline control) in the liver
ISIS NO 8μmol/kg 4μmol/kg 2μmol/kg 1μmol/kg
392063 6.9 18 39 71
396564 86 97 100 96
396006 6.5 ND ND 70
As mentioned above, has α-L-methylene oxygen base (4 '-CH2-O-2 ') the short antisense compounds of BNA modification has caused the dose dependent of target mRNA level to descend.The short antisense compounds that the amino BNA of apparatus aerobic base modifies is handled and has been caused the target expression to have appropriateness to descend.
Embodiment 8: single gives, the dose response research of carrying out with the short antisense compounds of targeting ApoB and PTEN nucleic acid
Give six ages in week male Balb/c mice (Jackson Laboratory, Bar Harbor ME) give single intraperitoneal (i.p.) injection antisense compounds, and dosage is 8,4,2 or 1 μ mol/kg.Each dosage group has four mices.Shown in the table 56 is sequence, pterion chemical constitution and the die body that is used for each antisense compounds of this research.The italic residue is represented methylene oxygen base (4 '-CH2-O-2 ') BNA modifies, and the underscore residue is represented N-methyl-oxygen base amino (4 '-CH2-N (CH3)-O-2 ') BNA modifies, and adds the frame residue and represents α-L-methylene oxygen base (4 '-CH2-O-2 ') BNA modifies.All antisense compounds all are to comprise thiophosphate in each position to connect key.Methylene oxygen base (4 '-CH of each cytosine of ISIS 116847 and ISIS 3920632-O-2 ') the cytosine residue in the BNA pterion is substituted by 5-methylcytosine, and methylene oxygen base (4 '-CH of ISIS 3927452-O-2 ') thymidine (thymidine) in the BNA pterion is substituted by 5-methylthymidine (thymidine).The PTEN nucleic acid that PTEN antisense compounds energy targeting has been announced comprises Genbank searching number U92437.1 (SEQ ID NO:13).The ApoB nucleic acid that ApoB antisense compounds energy targeting has been announced comprises Genbank searching number XM_137955.5 (SEQ ID NO:2).
Table 56: the short antisense compounds of targeting ApoB and PTEN nucleic acid
Figure A20078002541603351
Table 57:ApoB and PTEN mRNA decline percent (with respect to saline control)
ISIS NODosage (μ mol/kg)ApoB mRNA decline percent (with respect to saline)PTEN mRNA decline percent (with respect to saline)
387462 8 0.62 92.8
4 6.55 103
2 18.6 105
1 42.0 98.0
392063 8 126 6.79
4 111 18.1
2 112 42.4
1 114 62.3
396565 8 116 23.8
4 1.04 46.6
2 94.4 76.1
1 115 89.5
396006 8 94.3 62.9
4 101 18.2
2 79.7 52.4
1 111 82.4
Shown in table 57, each short antisense compounds with methylene oxygen base BNA modification shows that all the dose dependent of target mRNA level reduces.Particularly, the short antisense compounds (ISIS 396565) with the amino BNA of N-methyl-oxygen base pterion also demonstrates the dose dependent reduction of expressing with β-D-methylene oxygen base BNA and the similar PTEN of the short antisense compounds of α-L-methylene oxygen base BNA.Then, calculate the estimation ED of each antisense compounds with Graphpad Prism50Concentration.The result shows in following table 58.
Table 58: the ED of estimation50Concentration
The pterion chemical constitution ISIS NO ED50(μmole/kg) ED50(mg/kg)
Methylene oxygen base BNA 387462 0.8 3.9
Methylene oxygen base BNA 392063 1.5 7
The amino BNA of N-Me-oxygen base 396565 3.8 17.4
The pterion chemical constitution ISIS NO ED50(μmole/kg) ED50(mg/kg)
α-L-methylene oxygen base BNA 396006 2.1 9.3
Embodiment 9: the parent antisense compounds of targeting SGLT-2mRNA and giving of parent mixed matrix antisense compounds
With ISIS 257016 with 1,7.5,14 or the dosage of 17mg/kg weekly twice intraperitoneal give the db/db mice (Charles River Laboratories, Wilmington, MA).Matched group comprises by identical dosage accepts brinish group and accept the group of ISIS 145733.ISIS257016 and ISIS 145733 comprise sequence GAAGTAGCCACCAACTGTGC (SEQ ID NO:1572), further comprise central authorities' " at interval " zone that 10 2 '-deoxyribonucleotides are formed, both sides (5 ' and 3 ' direction) at interval are connected to " pterion " of 5 nucleic acid.(2 '-MOE) nucleotide is formed by 2 '-methoxy ethyl in the pterion.All cytidine residues all are the 5-methylcytidines.For ISIS 145733, (skeleton) Lian Jian is thiophosphate (P=S) without exception between nucleoside; And ISIS 257016 has mixed matrix.Connecting key between the nucleoside of ISIS 257016 is di-phosphate ester (P=O) in the pterion, is thiophosphate in the interval.After giving last dosage 48 hours, mice is put to death, analyze the SGLT-2mRNA level of renal tissue.The result shows in following table 59.
The Antisense Suppression that table 59:5-10-5MOE gapmer expresses SGLT2mRNA in the body
Figure A20078002541603361
Than saline control, ISIS 257016 and ISIS 145733 have significantly reduced the SGLT-2 level.(the mRNA level is to measure with RT, PCR in real time as mentioned above).But, proved that ISIS 257016 is reducing aspect the SGLT-2mRNA than ISIS 145733 powerful about 20-50 times.The reason group is also seen the relevant decline (the saline group is 661 ± 14, and the group of accepting ISIS 257016 is 470 ± 23) of plasma glucose levels throughout.ISIS 257016 and ISIS145733 being accumulated in the whole dosage range in kidney is all similar, but detects few total length 257016 antisense compounds in kidney, and this has supported that catabolite is this theory that causes the active reason that improves.And the onset that single gives behind the 25mg/kg is relevant with the time point (time pint) that does not almost have complete (intact) 257016 antisense compounds to stay.
By and the similar scheme of above-mentioned dosage, very lean mice, ob/ob mice with in ZDF rat (Charles Rivers Laboratories), carried out similar research.The sequence of the binding site of ISIS145733 and ISIS 257016 is (referring to table 60) of guarding between mice and rat.SGLT-2mRNA in the liver descends with above being seen similar.In the research of carrying out with rat, giving for twice weekly in continuous two weeks under the dosage of 10mg/kg, ISIS 145733 demonstrates and the SGLT-2mRNA level is reduced about 40%, and the reduction that ISIS257016 realized is greater than 80%.ISIS 257016 reduces the degree maximum that SGLT2 expresses under the low dosage of 12.5mg/kg.That carries out under than the low dosage scope studies show that in addition the mixed matrix antisense compounds causes the SGLT2mRNA level significantly to reduce under the dosage less than 1mg/kg/ week.
Embodiment 10: the parent antisense compounds of targeting SGLT-2mRNA gives with short antisense compounds
Pharmacokinetic shows that ISIS 257016 works as prodrug, and it becomes the pharmacophore of 12 nuclear bases through metabolism.In next one research, give ISIS 257016 or the ISIS 370717 that gives 1.5mg/kg in the ZDF rat peritoneum twice weekly, perhaps give saline with similar dosage.ISIS 370717 is antisense compounds of 12 nuclear bases of targeting SGLT-2 nucleic acid, comprise sequence TAGCCACCAACT (SEQ ID NO:154), and further comprising central authorities' " at interval " zone that 10 2 '-deoxyribonucleotides are formed, both sides (5 ' and 3 ' direction) at interval are connected to " pterion " of 1 nucleic acid.(2 '-MOE) nucleotide is formed by 2 '-methoxy ethyl in the pterion.All cytidine residues all are the 5-methylcytidines.(skeleton) Lian Jian is thiophosphate (P=S) without exception between the nucleoside of whole oligonucleotide.
5 week of administration back execution animal, analyze the SGLT-2mRNA level of renal tissue.ISIS 257016 is similar with the pharmacological activity of ISIS 370717, but the antisense compounds of these 12 nucleotide demonstrates onset faster.ISIS 370717 after single gives 2.8 μ mol/kg second day demonstrates SGLT2 in the kidney and expresses and almost have 80% to suppress, and ISIS257016 gives only to demonstrate about 25% in back second day at identical single and suppresses.Data acknowledgement ISIS 257016 is the prodrugs with 12 nucleotide pharmacophore.
Embodiment 11: the usefulness and the bioavailability of short antisense compounds
The improvement of the oral administration biaavailability of the performance improvements that ISIS 370717 is shown and these short antisense compounds makes them can be used for orally give.By allowing normal rat accept ISIS 370717, ISIS 145733 or the saline of 100mg/kg weekly for twice in the jejunum.Give back 48 hours execution animals for the last time, analyze the antisense compounds concentration and the SGLT-2mRNA level of renal tissue.Compared with the control, the accumulation of ISIS 370717 in renal tissue significantly higher (about 500 milligrams/gram tissue).In addition, SGLT-2mRNA has reduced above 80% than contrast.
Embodiment 12:12 the short antisense compounds of nucleotide pterion, interval and total length on every side changes
The relevant oligonucleotide of sequence that has the die body of variation with ISIS 3707171-10-1MOE gapmer as template for preparing.These variations provide in table 60.Use the sequence of having announced (to be respectively GenBank searching number U29881.1, to be incorporated herein with SEQ ID NO:1575; With GenBank searching number AJ292928.1, be incorporated herein with SEQ ID NO:1576), antisense compounds is designed to can the targeting mice or the zones of different of rat SGLT2 nucleic acid.
Table 60: the short antisense compounds of targeting SGLT2 nucleic acid
ISIS NO5 ' target site on the mice SEQ ID NO:15755 ' target site on the rat SEQ ID NO:1576The Gapmer die bodySequence (5 '-3 ') SEQ ID NO
257016 2680 148 5-10-5 MOEGAAGTAGCCACCAACTGTGC 1553
370717 2684 152 1-10-1 MOETAGCCACCAACT 1554
386169 2684 152 2-8-2 MOETAGCCACCAACT 1555
386176 2685 153 1-8-1 MOEAGCCACCAAC 1556
386196 2684 152 3-6-3 MOETAGCCACCAACT 1557
Analyze the effect of antisense compounds to mice SGLT2mRNA level.Data are to take from the numerical range of three experiments (range), give by peritoneal injection to give 2.5,0.5 or the above-mentioned MOE gapmer of 0.1umol/kg continuous three weeks of mice weekly for twice in experiment.Give back 48 hours execution mices for the last time, the SGLT2 level in the assessment kidney.The SGLT2mRNA level is measured by RT, PCR in real time as described in other embodiment of this paper.PCR result normalizes to inner ISIS contrast.The result shows in following table 61.
Table 61:1-10-1 and 1-10-2MOE gapmer are to the Antisense Suppression of SGLT2 in the body
Figure A20078002541603391
All various die bodys that tried of these presentation of results suppress in the dose dependent mode all that SGLT2 expresses in the body.Find that 1-10-1,2-8-2 and 1-8-1gapmer are potent especially.
Embodiment 13:1-10-1 and 1-10-2MOE Gapmer are to the Antisense Suppression of rat SGLT-2
1-10-1 that provides in the table 62 and 1-10-2MOE gapmer antisense compounds are designed to the zones of different of targeting mice or rat SGLT2 RNA.The short antisense compounds of in the table 62 all is the chimeric oligonucleotide (gamper) of length 12 or 13 nucleotide, it comprises central authorities' " at interval " section that 10 2 '-deoxyribonucleotides are formed, 5 ' side joint at interval has " pterion " of 1 nucleoside, and 3 ' side joint has " pterion " of 2 or 1 nucleotide.(2 '-MOE) nucleotide is formed by 2 '-methoxy ethyl in the pterion.(skeleton) Lian Jian is thiophosphate (P=S) between the nucleoside in the oligonucleotide.All cytidine residues all are the 5-methylcytidines.
Table 62: the antisense compounds of targeting SGLT2 nucleic acid
ISIS NO5 ' target site (mice) on the SEQ ID NO:XXX5 ' target site (rat) on the SEQ ID NO:XXXThe Gapmer die bodySequence (5 '-3 ') SEQ ID NO
370717 2684 152 1-10-1 MOETAGCCACCAACT 1554
382675 2683 151 1-10-1 MOETAGCCACCAACTG 1559
379692 508 1-10-1 MOETGTTCCAGCCCA 246
382676 507 1-10-2 MOETGTTCCAGCCCAG 246
379699 1112 1-10-2 MOEGGCATGAGCTT 281
382677 1111 1-10-2 MOEGGCATGAGCTTCA 281
382677 958 1-10-2 MOEGGCATGAGCTTCA 281
Analyze of the effect of short antisense compounds to rat SGLT2mRNA level.Data are to take from the numerical range of three experiments, give by peritoneal injection to give 450,150 or 1-10-1 or the 1-10-2MOE gapmer of 50nmol/kg continuous three weeks of male Sprague-Dawley rat (170-200g) weekly for twice in experiment.Give back 48 hours execution rats for the last time, the SGLT2mRNA level in the assessment kidney.The target level is measured by RT, PCR in real time as described in other embodiment of this paper.PCR result normalizes to inner ISIS contrast.The result shows in following table 63.
Table 63:1-10-1 and 1-10-2MOE gapmer are to the Antisense Suppression of SGLT2mRNA in the body
Figure A20078002541603411
These presentation of results 1-10-1 and 1-10-2MOE gapmer reduce SGLT2mRNA in the body in the dose dependent mode.
TBW and liver, spleen and the kidney weight of rat have also further been assessed.The significant change of spleen, liver weight or body weight can show that certain specific compound has caused toxic action.All variations are all in the range of error of experiment.In processing procedure or when research stops, do not observe significant body weight change.Not observing significant liver or spleen weight changes.
The toxic action of the short antisense compounds that gives in the body also can be assessed by measurement enzyme and the proteinic level relevant with the i or I of liver or kidney.The assessed value of the level of serum transaminase aspartate aminotransferase (AST) and alanine aminotransferase (ALT), the index of hepatic disease or damage often.Serum total bilirubin is the index of hepato-biliary function, and albumin and blood urea nitrogen (BUN) are the indexs of renal function.Glucose and triglyceride levels change because of the toxicity of handling sometimes.Serum glucose also depends on the activity of SGLT2 on the part.In the rat of handling, measure the level of ALT, AST, total bilirubin, albumin, BUN, glucose and triglyceride with short antisense compounds.The level of the routine clinical index of liver and kidney injury and disease does not have significant change with respect to the saline treatment animal in normal range, the short antisense compounds of this proof can appreciable impact kidney or liver function.Triglyceride and glucose level significantly do not raise for the saline treatment animal.
Embodiment 14:1-10-1MOE Gapmer is to the Antisense Suppression of mice and rat SGLT-2
Table 64 has shown the 1-10-1MOE gapmer antisense compounds of the zones of different that is designed to targeting mice SGLT2mRNA.
Table 64: the structure of the antisense compounds of targeting SGLT2mRNA is formed
ISIS NO5 ' target site (mice) on the SEQ ID NO:XXX5 ' target site (rat) on the SEQ ID NO:XXXDie bodySequence (5 '-3 ') SEQ ID NO
370717 2684 152 1-10-1MOETAGCCACCAACT 1554
379692 508 1-10-1MOETGTTCCAGCCCA 246
379699 1112 1-10-1MOEGGCATGAGCTTC 281
379702 1525 1-10-1MOEGCACACAGCTGC 293
381408 3034** 1-10-1MOETACCGAACACCT 1560
* represents that target sequence is had 3 mispairing
Analyze of the effect of short antisense compounds to mice SGLT2mRNA level.Data are taken from three experiments, give by peritoneal injection to give 450,150 or one of the above-mentioned 1-10-1MOE gapmer of 50nmol/kg male 6 weeks continuous two weeks of Balb/c mice in age weekly for twice in experiment.Give back 48 hours execution mices for the last time, the SGLT2mRNA level in the assessment kidney.The target level is measured by RT, PCR in real time as described in other embodiment of this paper.PCR result normalizes to inner ISIS contrast.The result shows in following table 65.
Table 65:1-10-1MOE gapmer is to the Antisense Suppression of SGLT-2mRNA in the body
Figure A20078002541603421
Figure A20078002541603431
These presentation of results, except ISIS 381408, all 1-10-1MOEgapmer suppress SGLT2 expression in the body in the dose dependent mode.The activity of ISIS381408 has shown (referring to table 65) in rat studies.
The assessment of 1-10-1 Gapmer in the rat
Studied the effect of above-mentioned 1-10-1gapmer (ginseng sees the above table 64) to rat SGLT2mRNA level.Data are taken from four experiments, continuous three weeks of male Sprague-Dawley rat (170-200g) are given 250nmol/kg twice weekly by peritoneal injection in experiment.Give back 48 hours execution rats for the last time, the SGLT2mRNA level in the assessment kidney.The target level is measured by RT, PCR in real time as described in other embodiment of this paper.PCR result normalizes to inner ISIS contrast.The result shows in following table 66.
Table 66:1-10-1MOE gapmer is to the Antisense Suppression of SGLT2mRNA in the body
Figure A20078002541603432
These presentation of results, all 1-10-1MOE gapmer all suppress the SGLT2 expression in the rat studies in vivo.
Embodiment 15: other 1-10-1 and 2-8-2MOE Gapmer are to the Antisense Suppression of mice and rat SGLT-2 expression
1-10-1 and 2-8-2MOE gapmer are short, and antisense compounds is designed to the zones of different of targeting mice SGLT2RNA, but has complementarity between each species.Table 67 has shown each short antisense compounds.The short antisense compounds of all of table 67 all is the gapmer of 12 nucleotide of length, comprises central authorities' " at interval " section of being made up of 2 '-deoxyribonucleotide, and both sides (5 ' and 3 ' direction) at interval are connected to " pterion " modified with 2 '.(2 '-MOE) nucleotide is formed by 2 '-methoxy ethyl in the pterion.(skeleton) Lian Jian is thiophosphate (P=S) between the nucleoside in the oligonucleotide.All cytidine residues all are the 5-methylcytidines.
Table 67: the short antisense compounds of targeting SGLT2 nucleic acid
ISIS NO5 ' target site (rat)Target SEQ ID (rat)The Gapmer die bodySequence (5 '-3 ') SEQ ID NO
379692 508 1-10-1MOETGTTCCAGCCCA 246
388625 508 1-10-1MOETGTTCCAGCCCA 246
379699 1112 1-10-1MOEGGCATGAGCTTC 281
388626 1112 2-8-2MOEGGCATGAGCTTC 281
379702 1525 2-8-2MOEGCACACAGCTGC 293
388627 1525 2-8-2MOEGCACACAGCTGC 293
Analyze of the effect of short antisense compounds to SGLT2mRNA level in the mice body.Data are taken from three experiments, give by peritoneal injection to give 0.5,0.1 or 1-10-1 or the 2-8-2MOEgapmer of 0.02umol/kg male 6 weeks continuous three weeks of Balb/c mice in age weekly for twice in experiment.Give back 48 hours execution mices for the last time, the SGLT2 level in the assessment kidney.The target level is measured by RT, PCR in real time as described in other embodiment of this paper.PCR result normalizes to inner ISIS contrast.The result shows in following table 68.
Table 68:1-10-1 and 2-8-2MOE gapmer are to the Antisense Suppression of GLT2mRNA in the body
Figure A20078002541603441
Figure A20078002541603451
These presentation of results 1-10-1 and 2-8-2MOE gapmer are the expression that suppresses SGLT2 in the body in the dose dependent mode.
TBW and liver, spleen and the kidney weight of mice have also further been assessed.All variations are all in the range of error of experiment.In processing procedure or when research stops, do not observe significant body weight change.Not observing significant liver or spleen weight changes.
In the mice of handling, measured the level of ALT, AST, BUN, transaminase, plasma creatinine, glucose and triglyceride with short antisense compounds.The level of the routine clinical index of liver and kidney injury and disease does not have significant change with respect to the saline treatment animal in normal range, the short antisense compounds of this proof can appreciable impact kidney or liver function.Triglyceride and glucose level does not significantly raise for the saline treatment animal.
Assessment ISIS 3796921-10-1 MOE Gapmer, ISIS 3921701-10-1 methylene oxygen base BNA Gapmer, ISIS 3886252-8-2MOE Gapmer and ISIS 392173 2-8-2 methylene oxygen base BNA Gapmer in mice
ISIS 379692 1-10-1 MOE gapmer and ISIS 3886252-8-2MOEgapmer are compared (referring to table 69) to the effect of SGLT2mRNA level in the mice body and this effect of ISIS 392170 1-10-1 methylene oxygen base BNA Gapmer and ISIS 3921732-8-2 methylene oxygen base BNAGapmer.Data are taken from three experiments, give by peritoneal injection to give 5,25 and ISIS 3796921-10-1MOE gapmer or the ISIS 3886252-8-2MOE gapmer of 125nmol/kg male 6 weeks continuous three weeks of Balb/c mice in age weekly for twice in experiment.Give back 48 hours execution mices for the last time, the SGLT2mRNA level in the assessment kidney.The target level is measured by RT, PCR in real time as described in other embodiment of this paper.PCR result normalizes to inner ISIS contrast.Data are represented with the percent change ("+" expression increases, and "-" expression descends) with respect to the saline treatment animal, and are shown in table 69.
Table 69:1-10-1 and 2-8-2MOE gapmer are to the Antisense Suppression of SGLT2mRNA in the body
Oligonucleotide dosage nmol/kg ISIS 379692 1-10-1MOEISIS 392170 1-10-1 methylene oxygen base BNA ISIS 388625 2-8-2MOEISIS 392173 2-8-2 methylene oxygen base BNA
125 -58 -69 -70 -75
25 -46 -54 -47 -57
5 -7 -23 -18 -44
These presentation of results 1-10-1 and 2-8-2 MOE gapmer are the expression that suppresses SGLT2 in the body in the dose dependent mode in three the highest dosage ranges.The result illustrates that also methylene oxygen base BNA construction is more more potent than MOE construction.In processing procedure or when research stops, do not observe significant body weight change.Not observing significant liver or spleen weight changes.The toxicity parameter of level that comprises ALT, AST, BUN and kreatinin does not have significant change with respect to the saline treatment animal in normal range, this illustrates that these chemical compounds can appreciable impact kidney or liver function.
Assessment ISIS 379692 1-10-1 MOE Gapmer and ISIS 3886252-8-2 MOE Gapmer in rat
Assessed ISIS 3796921-10-1 MOE gapmer and ISIS 388625 MOE2-8-2 gapmer (referring to table 70) effect to SGLT2mRNA level in the rat body.Data are taken from four experiments, give by peritoneal injection to give 200,50,12.5 or ISIS 3796921-10-1 MOE gapmer or the ISIS 388625 2-8-2 MOEgapmer of 3.125nmol/kg continuous three weeks of male Sprague-Dawley rat (170-200g) weekly for twice in experiment.Give back 48 hours execution rats for the last time, the SGLT2 level in the assessment kidney.The target level is measured by RT, PCR in real time as described in other embodiment of this paper.PCR result normalizes to inner ISIS contrast.The result shows in following table 70.
Table 70:1-10-1 and 2-8-2 MOE gapmer are to the Antisense Suppression of SGLT2mRNA in the body
Figure A20078002541603471
These presentation of results 1-10-1 and 2-8-2MOE gapmer are the expression that suppresses SGLT2 in the body in the dose dependent mode in three the highest dosage ranges.
TBW and liver, spleen and the kidney weight of rat have also further been assessed.All variations are all in the range of error of experiment.In processing procedure or when research stops, do not observe significant body weight change.Not observing significant liver or spleen weight changes.
In the rat of handling, measured the level of ALT, AST, BUN, cholesterol, plasma creatinine and triglyceride with short antisense compounds.The level of the routine clinical index of liver and kidney injury and disease does not have significant change with respect to the saline treatment animal in normal range, the short antisense compounds of this proof can appreciable impact kidney or liver function.
The Antisense Suppression that SGLT2 expresses in the embodiment 16:ZDF rat
Analyzed the effect of ISIS 388625,388626 and the gentle HbA1c of control oligonucleotide ISIS 388628 pairs of ZDF rat plasmas G/W.Leptin receptor defects type Zucker diabetes fat (ZDF) rat is the useful model of research type ii diabetes.Diabetes spontaneous generation when age in these male rats 8-10 week, and follow and hyperphagia, polyuria, excessive thirst and weightening finish occur and cut down, these symptoms similar to the clinical symptoms of diabetes (Phillips MS, et al., 1996, Nat Genet 13,18-19).Give six ZDF rat weekly peritoneal injections of continuous 12 weeks in age in week short antisense compounds, dosage is 400nM/kg.Data show in table 71 and 72.
Table 71: plasma glucose
Figure A20078002541603481
Table 72:HbA1c state
Compare with the animal of PBS and control treatment, ISIS 388625 and 388626 has significantly reduced plasma glucose levels and HbA1C.
Embodiment 17: Antisense Suppression (ISIS 388625) ISIS 388625 that the dirty middle SGLT2 of Testis et Pentis Canis is expressed is 2-8-2MOE Gapmer, and its sequence isTGGTTCCAGCCCA(SEQ ID NO:246) (for example referring to table 71).Studied the effect of 388625 couples of Canis familiaris L. SGLT2mRNA of ISIS level.Data are taken from two dosage groups, have in two groups 9 male than lattice Canis familiaris L. (beagle dog), twice subcutaneous injection 1 or ISIS in 10mg/kg/ week 388625 or saline weekly.Put to death all Canis familiaris L.s at the 46th day that studies, assessment kidney SGLT2 level.The target level is measured by quantitative RT, PCR in real time as described in other embodiment of this paper.PCR result normalizes to inner ISIS contrast.The result shows in following table 73.
The Antisense Suppression of SGLT2mRNA in 388625 pairs of bodies of table 73:ISIS
Figure A20078002541603491
These presentation of results can realize that SGLT2mRNA descends greater than 80% under the ISIS in 1mg/kg/ week 388625 dosage.Under high slightly dosage, can realize bigger decline.Also confirm in Canis familiaris L., to give ISIS 388625 and can improve glucose tolerance.In the glucose tolerance test of standard, to compare with saline control, the peak value plasma glucose levels on average reduces above 50%, and glucose subsequently descends and reduces.The urine glucose is drained and has also been increased.
Embodiment 18: the in vivo test of the short antisense compounds of targeting SGLT2 nucleic acid
Design, synthesized 20 with people/monkey/mice/complementary 1-10-1MOEgapmer of rat SGLT2, and in vivo test their suppress the situation of SGLT2mRNA level in kidney.Table 74 provides the target site to mice and rat.Table 4 and 5 provides the target site to the people.Data are meansigma methodss of two experiments, in experiment, give male 6 continuous two weeks of Balb/c mice in age in week the oligonucleotide of twice peritoneal injection (totally four injections) 350nmol/kg weekly.Give back 48 hours execution mices for the last time, the SGLT2mRNA level in the assessment kidney.The SGLT2mRNA level be with two different PCR primer probe groups---primer probe groups (PPS) 534 and PPS 553---according to the program of standard, measure by quantitative PCR in real time analysis.The SGLT2mRNA level is normalized to cyclophilin mRNA level, and back one level also is to measure by quantitative PCR in real time.The result shows in following table 74.
Table 74: the Antisense Suppression of SGLT2 in the body
ISIS SEQ ID SEQ IDSequence (5 '-3 ')Die body PPS PPS SEQ
NO5 ' target site (mice) on the NO:XXX5 ' target site (rat) on the NO:XXX534 (accounting for the percent of saline control)553 (accounting for the percent of saline control) ID NO
PBS N/A------
370717 2684 152 TAGCCACCAACT 1-10-1 MOE -84.4 -84.3 1554
379684 2070 64 TGTCAGCAGGAT 1-10-1 MOE -45.0 -43.2 214
379685 2103 97 TGACCAGCAGGA 1-10-1 MOE -10.3 -20.5 219
379686 2121* 115 ACCACAAGCCAA 1-10-1 MOE -71.9 -75.1 225
379687 2824 216 GATGTTGCTGGC 1-10-1 MOE -47.1 -52.1 230
379688 2876 268 CCAAGCCACTTG 1-10-1 MOE -62.6 -70.4 240
379689 298 AGAGCGCATTCC 1-10-1 MOE -17.5 -30.4 241
379690 415 ACAGGTAGAGGC 1-10-1 MOE -18.9 -22.5 242
379691 454 AGATCTTGGTGA 1-10-1 MOE -35.0 -48.6 243
379692 508 TGTTCCAGCCCA 1-10-1 MOE -88.1 -88.5 246
379693 546 CATGGTGATGCC 1-10-1 MOE -51.6 -59.9 254
379694 609 GACGAAGGTCTG 1-10-1 MOE -42.1 -54.4 264
379695 717 GGACACCGTCAG 1-10-1 MOE -52.5 -64.1 266
379696 954 CAGCTTCAGGTA 1-10-1 MOE -24.6 -36.2 267
379697 982 CTGGCATGACCA 1-10-1 MOE -32.0 -46.3 272
379698 1071 GCAGCCCACCTC 1-10-1 MOE -11.8 -27.0 275
379699 1112 GGCATGAGCTTC 1-10-1 MOE -83.5 -85.8 281
379700 1138 CCAGCATGAGTC 1-10-1 MOE -2.8 -16.4 285
379701 1210 CCATGGTGAAGA 1-10-1 MOE -0.3 -11.9 288
379702 1525 GCACACAGCTGC 1-10-1 MOE -87.8 -89.5 293
379703 1681 GCCGGAGACTGA 1-10-1 MOE -44.2 -45.9 295
* representing has 1 or 2 mispairing to target sequence
The Antisense Suppression of people PCSK9 in the embodiment 19:Hep3B cell
Tested of the effect of the short antisense compounds of targeting PCSK9 nucleic acid to external PCSK9mRNA.Table 6 has shown each short antisense compounds.Isis No, Gapmer die body and the SEQ ID NO of each short antisense compounds show again in table 75.Short antisense compounds with 100mM is handled the Hep3B cell of cultivating.The 5-10-5MOEgapmer of targeting PCSK9 nucleic acid is as positive control.After the processing time section,, as described herein by quantitative PCR in real time measurement PCSK9mRNA level from cell separation RNA.With the PCSK9mRNA level according to passing through
Figure A20078002541603511
Total rna content of measuring is adjusted.The result suppresses percent (%Inhib) expression with the PCSK9 with respect to untreatment control cell in table 75.In " (%Inhib) " hurdle, " 0 " represents that this specific antisense compounds do not observe the decline of PCSK9mRNA.
Table 75: short antisense compounds is to the Antisense Suppression of PCSK9
ISIS No. SEQ ID NO5 ' target site on the SEQ ID NO:43 ' target site on the SEQ ID NO:4The Gapmer die body% suppresses scope %Inhib
400297 329 695 708 2-10-2MOE 0
400298 330 696 709 2-10-2MOE 0
400299 331 697 710 2-10-2MOE 0
400300 332 742 755 2-10-2MOE 9
400301 333 757 770 2-10-2MOE 20-30% 27
400302 334 828 841 2-10-2MOE 0
400303 335 829 842 2-10-2MOE 0
400304 336 830 843 2-10-2MOE 10-20% 11
400305 337 937 950 2-10-2MOE 30-40% 38
400306 338 952 965 2-10-2MOE 40-50% 40
400307 339 988 1001 2-10-2MOE 70-80% 76
400308 340 989 1002 2-10-2MOE 50-60% 55
400309 341 990 1003 2-10-2MOE 40-50% 44
400310 342 991 1004 2-10-2MOE 8
400311 343 992 1005 2-10-2MOE 10-20% 18
400312 344 993 1006 2-10-2MOE 20-30% 28
400313 345 994 1007 2-10-2MOE 10-20% 10
400314 346 1057 1070 2-10-2MOE 20-30% 26
400315 347 1075 1088 2-10-2MOE 0
400316 348 1076 1089 2-10-2MOE 8
400317 349 1077 1090 2-10-2MOE 7
400318 350 1078 1091 2-10-2MOE 20-30% 26
400319 351 1093 1106 2-10-2MOE 0
400320 352 1094 1107 2-10-2MOE 0
400321 353 1095 1108 2-10-2MOE 0
400322 354 1096 1109 2-10-2MOE 0
400323 355 1147 1160 2-10-2MOE 0
400324 356 1255 1268 2-10-2MOE 7
400325 357 1334 1347 2-10-2MOE 4
400326 358 1335 1348 2-10-2MOE 0
400327 359 1336 1349 2-10-2MOE 30-40% 36
400328 360 1453 1466 2-10-2MOE 10-20% 13
400329 361 1454 1467 2-10-2MOE 10-20% 14
400330 362 1455 1468 2-10-2MOE 40-50% 43
400331 363 1456 1469 2-10-2MOE 30-40% 35
400332 364 1569 1582 2-10-2MOE 0
400333 365 1570 1583 2-10-2MOE 0
400334 366 1571 1584 2-10-2MOE 0
400335 367 1572 1585 2-10-2MOE 0
400336 368 1573 1586 2-10-2MOE 4
400337 369 1574 1587 2-10-2MOE 0
400338 370 1575 1588 2-10-2MOE 9
400339 371 1576 1589 2-10-2MOE 0
400340 372 1577 1590 2-10-2MOE 0
400341 373 1578 1591 2-10-2MOE 0
400342 374 1621 1634 2-10-2MOE 0
400343 375 1622 1635 2-10-2MOE 0
400344 376 1623 1636 2-10-2MOE 0
400345 377 1624 1637 2-10-2MOE 0
400346 378 1738 1751 2-10-2MOE 5
400347 379 1739 1752 2-10-2MOE 0
400348 380 1740 1753 2-10-2MOE 0
400349 381 1741 1754 2-10-2MOE 10-20% 13
400350 382 1834 1847 2-10-2MOE 10-20% 15
400351 383 1835 1848 2-10-2MOE 10-20% 14
400352 384 1836 1849 2-10-2MOE 20-30% 29
400353 385 1837 1850 2-10-2MOE 10-20% 19
400354 386 1838 1851 2-10-2MOE 10-20% 19
400355 387 1839 1852 2-10-2MOE 0
400356 388 1840 1853 2-10-2MOE 0
400357 389 2083 2096 2-10-2MOE 0
400358 390 2084 2097 2-10-2MOE 10-20% 12
400359 391 2085 2098 2-10-2MOE 0
400360 392 2086 2099 2-10-2MOE 30-40% 38
400361 393 2316 2329 2-10-2MOE 2
400362 394 2317 2330 2-10-2MOE 10-20% 16
400363 395 2318 2331 2-10-2MOE 8
400364 396 2319 2332 2-10-2MOE 0
400365 397 2320 2333 2-10-2MOE 20-30% 25
400366 398 2321 2334 2-10-2MOE 10-20% 15
400367 399 2322 2335 2-10-2MOE 10-20% 12
400368 400 2323 2336 2-10-2MOE 10-20% 11
400369 401 2324 2337 2-10-2MOE 0
400370 402 2325 2338 2-10-2MOE 10-20% 13
400371 403 3543 3556 2-10-2MOE 0
Shown in table 75, short antisense compounds targeting PCSK9 nucleic acid, that have 2-10-2MOE Gapmer die body has reduced the PCSK9 mRNA in the cultured cell.
The short antisense compounds of targeting PCSK9 nucleic acid is to test in Hep3B cell dosage response experiment.Cell is that the short antisense compounds of the nM concentration that provides with table 76 as described herein is handled.After the processing time section,, as described herein by quantitative PCR in real time measurement PCSK9mRNA level from cell separation RNA.The PCSK9mRNA level is normalized to cyclophilin mRNA level, and back one level is to measure by PCR in real time with cyclophilin Auele Specific Primer probe groups.The result suppresses percent with the PCSK9 with respect to untreatment control cell and represents.The EC that has also shown every kind of short antisense compounds of test in the dose response experiment50(observe the mRNA reduction and reach 50% o'clock concentration), EC50Be to calculate with Graphpad Prism.As shown in the table, the PCSK9mRNA level reduces in the dose dependent mode.
Table 76: short antisense compounds is to the dose dependent Antisense Suppression of PCSK9
Figure A20078002541603531
Figure A20078002541603541
Embodiment 20: comprise the Antisense Suppression of the short antisense compounds of BNAs to PCSK9
The short antisense compounds of targeting PCSK9 nucleic acid is to test in mice and people's cultured cell in the dose response experiment.The chemical compound that is tried comprises ISIS 403739 and ISIS403740.ISIS 403739 these short antisense compounds are made up of the nucleotide sequence of SEQ ID NO:404, have the 2-10-2Gapmer die body, and wherein the nucleotide in the pterion comprises (6 ' S)-6 ' methyl BNA.ISIS 403740 these short antisense compounds are made up of the nucleotide sequence of SEQ ID NO:405, have the 2-10-2Gapmer die body, and wherein the nucleotide in the pterion comprises (6 ' S)-6 ' methyl BNA.Also tested the 5-10-5MOE gapmer of targeting PCSK9 nucleic acid.
Mouse liver cell is inoculated, and the short antisense compounds of the nM concentration that provides with table 77 as described herein is handled.After the processing time,, as described herein by quantitative PCR in real time measurement PCSK9mRNA level from cell separation RNA.The PCSK9mRNA level is normalized to cyclophilin mRNA level, and back one level is to measure by PCR in real time with cyclophilin Auele Specific Primer probe groups.The result suppresses percent with the PCSK9 with respect to untreatment control cell and represents.Wherein the decline of PCSK9mRNA is not observed in " 0 " expression.ISIS 403739 demonstrates mice PCSK9mRNA under the dosage of 30nM and Geng Gao dose dependent descends.ISIS 403740 shows the decline of mice PCSK9mRNA under two maximum dose levels.
Table 77: comprise the Antisense Suppression of the short antisense compounds of BNAs to mice PCSK9
Figure A20078002541603542
People Hep3B cell is handled with the short antisense compounds of nM concentration as herein described.After the processing time,, as described herein by quantitative PCR in real time measurement PCSK9mRNA level from cell separation RNA.The PCSK9mRNA level is normalized to cyclophilin mRNA level, and back one level is to measure by PCR in real time with cyclophilin Auele Specific Primer probe groups.The result suppresses percent with the PCSK9 with respect to untreatment control cell and represents.Data show in table 78, prove with ISIS 403740 and handle the reduction that dose dependent appears in descendant PCSK9mRNA.ISIS 403739 demonstrates dose dependent and descends under higher dosage.
Table 78: comprise the Antisense Suppression of the short antisense compounds of BNAs to mice PCSK9
Figure A20078002541603551
The Antisense Suppression of GCGR in the embodiment 21:HepG2 cell
Tested of the effect of the short antisense compounds of targeting GCGR nucleic acid to external GCGR mRNA.
The HepG2 cell
The cultivation HepG2 cell that with the density in 96 orifice plates is 10000 cells/well is handled by the antisense oligonucleotide of usefulness 25,50,100 described herein or 200nM.After the processing time,, as described herein by quantitative PCR in real time measurement GCGRmRNA level from cell separation RNA.With GCGR mRNA level according to passing through
Figure A20078002541603552
Total rna content of measuring is adjusted.The result reduces percent with the GCGRmRNA with respect to untreatment control cell and represents.
Table 79 has provided with the data after ISIS 327161 (a kind of 3-10-3MOE gapmer) processing of prescribed dose.ISIS 327161 has reduced GCGR mRNA in the dose dependent mode.
Table 79: short antisense compounds is to the Antisense Suppression of the GCGR in the HepG2 cell
ISIS NO. Seq ID NOSequence (5 '-3 ')The Gapmer die body 25 nM 50 nM 100 nM 200 nM
327161 520 AGCTGCTGTACATC 3-8-3 MOE -36 -30 -33 -64
The monkey hepatocyte
Tested of the effect of the short antisense compounds of other targeting GCGR nucleic acid to external monkey GCGRmRNA.Former generation monkey hepatocyte usefulness 25,50,100 as described herein of cultivating or the short antisense compounds of 200nM are handled.After the processing time,, as described herein by quantitative PCR in real time measurement GCGR mRNA level from cell separation RNA.With GCGR mRNA level according to passing through
Figure A20078002541603561
Total rna content of measuring is adjusted.The result reduces percent with the GCGR mRNA with respect to untreatment control cell and represents in table 80.
Table 80: short antisense compounds is to the Antisense Suppression of the GCGR in the former generation monkey hepatocyte
ISIS NO. Seq ID NOSequence (5 '-3 ')The Gapmer die body 25 nM 50 nM 100 nM 200 nM
327131 489 ATGTTGGCCGTGGT 3-8-3 MOE 0 -8 -36 -36
327161 520 AGCTGCTGTACATC 3-8-3 MOE -19 -33 -55 -54
Embodiment 22: short antisense compounds is to the Antisense Suppression of DGAT2
Tested of the effect of the short antisense compounds of targeting DGAT2 nucleic acid to external DGAT2mRNA.Handle cultivation A10 cell in 96 orifice plates with the short antisense compounds of 75mM.After the processing time,, as described herein by quantitative PCR in real time measurement DGAT2mRNA level from cell separation RNA.With the DGAT2mRNA level according to passing through
Figure A20078002541603571
Total rna content of measuring is adjusted.The result suppresses percent with the DGAT2 with respect to untreatment control cell and represents in table 81.
The Antisense Suppression of DGAT2 in the table 81:A10 cell
ISIS NO. Seq ID NOSequence (5 '-3 ')The Gapmer die bodyThe % contrast
372491 795 ACATGAGGATGACACT 3-10-3MOE 80
372500 702 GTGTGTCTTCACCAGC 3-10-3MOE 16
372501 704 TTGTGTGTCTTCACCA 3-10-3MOE 28
372503 708 GCAGGTTGTGTGTCTT 3-10-3MOE 35
372508 719 AGTTCCTGGTGGTCAG 3-10-3MOE 35
372516 805 TACAGAAGGCACCCAG 3-10-3MOE 27
372524 738 GCCAGGCATGGAGCTC 3-10-3MOE 21
372530 746 TCGGCCCCAGGAGCCC 3-10-3MOE 35
372546 825 TTGGTCTTGTGATTGT 3-10-3MOE 34
372563 691 AGCCAGGTGACAGA 2-10-2MOE 48
372569 796 CATGAGGATGACAC 2-10-2MOE 104
372578 703 TGTGTCTTCACCAG 2-10-2MOE 59
372580 707 GGTTGTGTGTCTTC 2-10-2MOE 48
372586 720 GTTCCTGGTGGTCA 2-10-2MOE 40
372594 806 ACAGAAGGCACCCA 2-10-2MOE 77
372602 739 CCAGGCATGGAGCT 2-10-2MOE 39
372618 765 GTGGTACAGGTCGA 2-10-2MOE 29
372624 826 TGGTCTTGTGATTG 2-10-2MOE 56
In external dose response experiment, tested the short antisense compounds of other targeting DGAT2mRNA.The A10 cell prepare as mentioned above and with 6.25,12.5,25.0,50.0,100.0 and the short antisense compounds of 200.0nM handle, to determine that DGAT2 suppresses whether to occur in the dose dependent mode.The short antisense compounds of each that provides in the digital proof table 82 all reduces rat DGAT2mRNA in the dose dependent mode.The result represents with the inhibition percent with respect to untreatment control cell." 0 " expression DGAT2mRNA does not reduce.
The dose-dependent inhibition of DGAT2 in the table 82:A10 cell
ISIS NO. Seq ID NOSequence (5 '-3 ')The Gapmer die body 6.25 nM 12.5 nM 25.0 nM 50.0 nM 100.0 nM 200.0 nM
372562 784 GTCTTGGAGGGCCG 2-10-2 MOE 0 0 0 36 48 75
372568 794 GACACTGCAGGCCA 2-10-2 MOE 0 0 15 26 72 69
372586 720 GTTCCTGGTGGTCA 2-10-2 MOE 19 0 7 22 45 77
372602 739 CCAGGCATGGAGCT 2-10-2 MOE 0 0 0 18 47 76
372618 765 GTGGTACAGGTCGA 2-10-2 MOE 0 5 0 27 65 80
At testing in vitro the short antisense compounds of other targeting DGAT2mRNA.The A10 cell prepare as mentioned above and with 0.62,1.85,5.56,16.67,50.0 and the short antisense compounds of 150.0nM handle, to determine that DGAT2 suppresses whether to occur in the dose dependent mode.The quantitative PCR in real time of DGAT2mRNA usefulness as described herein is measured.The short antisense compounds of each that provides in the digital proof following table 83 all suppresses rat DGAT2mRNA in the dose dependent mode.The result suppresses percent with the rat DGAT2 with respect to untreatment control cell and represents.Wherein the decline of DGAT2mRNA is not observed in " 0 " expression.
The dose-dependent inhibition of DGAT2 in the table 83:A10 cell
ISIS NO. Seq ID NOSequence (5 '-3 ')The Gapmer die body 0.62 nM 1.85 nM 5.56 nM 16.67 nM 50 nM 150 nM
372500 702 GTGTGTCTTCACCAGC 3-10-3 MOE 0 0 0 18 64 88
372501 704 TTGTGTGTCTTCACCA 3-10-3 MOE 1 5 10 11 25 68
372503 708 GCAGGTTGTGTGTCTT 3-10-3 MOE 7 10 4 25 54 80
372508 719 AGTTCCTGGTGGTCAG 3-10-3 MOE 0 0 6 14 39 71
372516 805 TACAGAAGGCACCCAG 3-10-3 MOE 1 10 0 4 35 81
372524 738 GCCAGGCATGGAGCTC 3-10-3 MOE 7 0 5 30 68 91
372530 746 TCGGCCCCAGGAGCCC 3-10-3 MOE 0 2 0 10 38 78
372546 825 TTGGTCTTGTGATTGT 3-10-3 MOE 0 2 11 4 48 78
372563 691 AGCCAGGTGACAGA 2-10-2 MOE 0 0 0 1 4 46
372578 703 TGTGTCTTCACCAG 2-10-2 MOE 0 0 0 2 7 42
372580 707 GGTTGTGTGTCTTC 2-10-2 MOE 0 5 5 3 16 42
372586 720 GTTCCTGGTGGTCA 2-10-2 MOE 0 0 0 0 7 55
372594 806 ACAGAAGGCACCCA 2-10-2 MOE 0 0 0 0 2 15
372602 739 CCAGGCATGGAGCT 2-10-2 MOE 0 0 10 0 19 51
372618 765 GTGGTACAGGTCGA 2-10-2 MOE 0 0 0 0 30 60
372624 826 TGGTCTTGTGATTG 2-10-2 MOE 0 0 0 1 16 38
The Antisense Suppression of people PTP1B in the embodiment 23:HuVEC cell
Tested of the effect of the short antisense compounds of targeting PTP1B nucleic acid to external PTP1B mRNA.With the density in 96 orifice plates is that the cultivation HuVEC cell short antisense compounds with 3nM as described herein of 5000 cells/well is handled.After the processing time,, as described herein by quantitative PCR in real time measurement PTP1B mRNA level from cell separation RNA.With PTP1B mRNA level according to passing through
Figure A20078002541603591
Total rna content of measuring is adjusted.The result suppresses percent (%Inhib) expression with the PTP1B with respect to untreatment control cell.Digital proof in the table 84, short antisense compounds targeting PTP1B nucleic acid, that have the 2-10-2Gapmer die body can suppress the PTP1B in the HuVEC cell.
Table 84: short antisense compounds is to the Antisense Suppression of the PTP1B in the HuVEC cell
ISIS NO. SEQ ID NOThe Gapmer die body %Inhib
399301 1542 2-10-2OMe 55
404137 1053 2-10-2MOE 76
404138 1054 2-10-2MOE 76
404139 1052 2-10-2MOE 80
404140 1051 2-10-2MOE 73
The Antisense Suppression of people PTP1B in the embodiment 24:HepG2 cell
Tested of the effect of the short antisense compounds of targeting PTP1B nucleic acid to external PTP1B mRNA.With the density in 96 orifice plates is that the cultivation HepG2 cell of 10000 cells/well is handled with the antisense oligonucleotide of 25nM.After the processing time,, as described herein by quantitative PCR in real time measurement PTP1B mRNA level from cell separation RNA.With the PTP1BmRNA level according to passing through
Figure A20078002541603592
Total rna content of measuring is adjusted.The result suppresses percent (%Inhib) expression with the PTP1B with respect to untreatment control cell.Digital proof in the table 85, short antisense compounds targeting PTP1B nucleic acid, that have the 2-10-2Gapmer die body can suppress the PTP1B in the HepG2 cell.
Table 85: short antisense compounds is to the Antisense Suppression of the PTP1B in the HepG2 cell
ISIS NO. SEQ ID NOThe Gapmer die body %Inhib
399301 1542 2-10-2OMe 43
404137 1053 2-10-2MOE 71
404138 1054 2-10-2MOE 86
404139 1052 2-10-2MOE 45
404140 1051 2-10-2MOE 93
Embodiment 25: at the HuVEC cell: the Antisense Suppression of carrying out PTP1B in the dose response experiment
With the inoculation of the density of 5000 cells/well, and short antisense compounds with the nM concentration shown in the table 86 as described herein is handled with human vascular endothelial (HuVEC) cell.After the processing time,, as described herein by quantitative PCR in real time measurement PTP1B mRNA level from cell separation RNA.With PTP1B mRNA level according to passing through
Figure A20078002541603601
Total rna content of measuring is adjusted.Measure the mRNA level with two kinds of different people PTP1B primer probe groups.The result of primer probe groups (PPS) 198 shows that in table 86 result of primer probe groups (PPS) 3000 shows in table 87.The result represents with the PTP1B mRNA expression inhibiting percent with respect to untreatment control cell.Wherein the decline of PTP1B mRNA is not observed in " 0 " expression.Shown in table 86 and 87, PTP1B mRNA level reduces in the dose dependent mode.
The dose response of people PTP1B in the table 86:HuVEC cell uses PPS 198
Figure A20078002541603602
Figure A20078002541603611
The dose response of people PTP1B in the table 87:HuVEC cell uses PPS 3000
Figure A20078002541603612
Embodiment 26: short antisense compounds is to the Antisense Suppression of ApoB
Tested the interior effect of body of short antisense compounds shown in the table 88.Give 6 ages in week male Balb/c mice (Jackson Laboratory, Bar Harbor, ME) continuous three weeks weekly twice intraperitoneal give 3.2,1,0.32 or the dosage of .1umol/kg.5-10-5MOE gapmer is as control treatment.Put to death mice the last time behind the dosage in about 48 hours.Collect liver organization and carry out the RNA separation, collect blood and carry out the serum chemistry analysis.ApoB mRNA level is as described herein to be measured by PCR in real time.ApoB mRNA level is normalized to the rna level of measuring by RIBOGREEN, and in table 89 to represent with respect to the inhibition percent of the ApoB mRNA level in the saline treatment control animal.
Table 88: the short antisense compounds of targeting ApoB nucleic acid
ISIS NOSequence (5 '-3 ')The Gapmer die body SEQ ID NO
387462 GGTACATGGAAGTC2-10-2 methylene oxygen base BNA 190
398296 GGTACATGGAAGTC2-10-2 6 '-(S)-methyl methylene oxygen base BNA 190
Table 89: comprise the Antisense Suppression of the short antisense compounds of BNA to ApoB
IsisNoDosage (umol/kg) %Inhib
379818 1 56
387462 0.1 33
0.32 57
1 93
3.2 99
398296 0.1 17
0.32 35
1 80
3.2 98
Table 89 is presented at after having the 2-10-2Gapmer die body and be with the short antisense compounds processing of BNA modification in the pterion, and ApoB mRNA level reduces in the dose dependent mode.Under 1umol/kg dosage, short antisense compounds to the inhibition of ApoB greater than 5-10-5MOEgapmer viewed inhibition under suitable dosage.1 and the short antisense compounds dosage of 3.2umol/kg under, cholesterol has reduced.
Judge that by organ weight and body weight, serum transaminase, bilirubin, blood urea nitrogen and kreatinin short antisense compounds seldom shows and even do not show adverse side effect.
Embodiment 27: short antisense compounds is to the Antisense Suppression of PTEN
Tested the interior effect of body of short antisense compounds shown in the table 90.Give 6 ages in week male Balb/c mice (Jackson Laboratory, Bar Harbor, ME) continuous three weeks weekly twice intraperitoneal give 3.2,1,0.32 or the dosage of .1umol/kg.5-10-5MOE gapmer is as control treatment.Put to death mice the last time behind the dosage in about 48 hours.Collect liver organization and carry out the RNA separation, collect blood and carry out the serum chemistry analysis.PTEN mRNA level is as described herein to be measured by PCR in real time.PTEN mRNA level is normalized to the rna level of measuring by RIBOGREEN, and in table 91 to represent with respect to the inhibition percent of the PTEN mRNA level in the saline treatment control animal.
Table 90: the short antisense compounds of targeting PTEN nucleic acid
ISIS NOSequence (5 '-3 ')The Gapmer die body SEQ ID NO
392063 AGGCCAGTGCTAAG2-10-2 methylene oxygen base BNA 1226
392749 AGGCCAGTGCTAAG2-10-2 (6 ' S)-6 '-methyl methylene oxygen base BNA 1226
396006 AGGCCAGTGCTAAG2-10-2 α-L-methylene oxygen base BNA 1226
Table 91: comprise the Antisense Suppression of the short antisense compounds of BNA modification to PTEN
IsisNoDosage (umol/kg) % Inhib
116847 1 47
392063 0.1 26
0.32 43
1 74
3.2 96
392749 0.1 17
0.32 34
1 64
3.2 96
396006 0.1 20
0.32 32
1 67
3.2 88
Table 91 is presented at after having the 2-10-2Gapmer die body and be with the short antisense compounds processing of BNA modification in the pterion, and PTEN mRNA level level reduces in the dose dependent mode.Under 1umol/kg dosage, short antisense compounds to the inhibition of PTEN greater than 5-10-5MOE gapmer viewed inhibition under suitable dosage.
Except the ISIS 392063 of maximum dose level, do not observe significantly improving of serum transaminase.Generally speaking, lack antisense compounds and seldom show and even do not show adverse side effect.
Embodiment 28: the single that comprises the short antisense compounds of BNA modification gives
Give 6 ages in week male Balb/c mice (ME) single intraperitoneal injection is lacked antisense compounds for Jackson Laboratory, Bar Harbor, and dosage is 8,4,2 or 1 μ mol/kg.The short antisense compounds that is tried is ISIS 387462 and ISIS 398296.Each dosage group has four mices.5-10-5MOE gapmer is as control treatment.Put to death mice the last time behind the dosage in about 48 hours.Collect liver organization and carry out the RNA separation, collect blood and carry out the serum chemistry analysis.ApoB mRNA level is as described herein to be measured by PCR in real time.ApoB mRNA level is normalized to the rna level of measuring by RIBOGREEN, and in table 92 to represent with respect to the inhibition percent of the ApoB mRNA level in the saline treatment control animal.
Table 92: comprise the Antisense Suppression of the short antisense compounds of BNA to ApoB
IsisNoDosage (umol/kg) %Inhib
379818 8 77
387462 8 99
4 93
2 81
1 58
398296 8 97
4 81
2 54
1 19
After table 92 was presented at the short antisense compounds that single has the 2-10-2Gapmer die body and band BNA modifies in the pterion, ApoB mRNA level reduced in the dose dependent mode.Under 8umol/kg dosage, short antisense compounds to the inhibition of ApoB greater than 5-10-5MOE gapmer viewed inhibition under suitable dosage.The ED of ISIS 38746250Be 3.9mg/kg, the ED of ISIS 39829650Be 8.7mg/kg.Cholesterol also reduces in the dose dependent mode.Triglyceride reduces under maximum dose level.
Judge that by organ weight and body weight, serum transaminase, bilirubin, blood urea nitrogen and kreatinin short antisense compounds seldom shows and even do not show adverse side effect.
In similarly single is studied, ISIS 392748 (has SEQ ID NO:1226, the 2-10-2Gapmer die body, wherein the nucleotide in pterion comprises (6 ' R)-6 '-methyl methylene oxygen base BNA modification) reduced PTEN mRNA in the dose dependent mode.In addition, and ISIS 392749 (have SEQ ID NO:1226, the 2-10-2Gapmer die body, wherein the nucleotide in pterion comprises (6 ' S)-6 '-methyl methylene oxygen base BNA modification) reduced PTEN mRNA in the dose dependent mode.Have the sequence of 2-10-2Gapmer die body, SEQ ID NO:1226 and the short antisense compounds that 6-(S)-CH2-O-CH3-BNA modifies, in similar body, also reduced PTEN mRNA in the research.Have the sequence of 2-10-2Gapmer die body, SEQ ID NO:1226 and the short antisense compounds that 6-(S)-CH2-O-CH3-BNA modifies, in similar body, also reduced PTEN mRNA in the research.
Embodiment 29: the single that comprises the short antisense compounds of BNA modification gives
Give 6 ages in week male Balb/c mice (ME) single intraperitoneal injection is lacked antisense compounds for Jackson Laboratory, Bar Harbor, and dosage is 8,4,2 or 1 μ mol/kg.Each dosage group has four mices.The chemical compound that is tried is ISIS 392063, ISIS 392749 and ISIS 366006.5-10-5MOE gapmer is as control treatment.Put to death mice the last time behind the dosage in about 48 hours.Collect liver organization and carry out the RNA separation, collect blood and carry out the serum chemistry analysis.ApoB mRNA level is as described herein to be measured by PCR in real time.ApoB mRNA level is normalized to the rna level of measuring by RIBOGREEN, and in table 93 to represent with respect to the inhibition percent of the ApoB mRNA level in the saline treatment control animal.
Table 93: comprise the Antisense Suppression of the short antisense compounds of BNA modification to PTEN
IsisNoDosage (umol/kg) % Inhib
116847 8 62
392063 8 92
4 82
2 58
1 38
396565 8 76
4 38
2 24
1 11
396006 8 94
4 82
2 48
1 18
Table 93 is presented at after having the 2-10-2Gapmer die body and be with the short antisense compounds processing of BNA modification in the pterion, and PTEN mRNA level reduces in the dose dependent mode.Under 8umol/kg dosage, short antisense compounds to the inhibition of PTEN greater than 5-10-5MOEgapmer viewed inhibition under suitable dosage.The estimation ED of ISIS 39206350Be 7mg/kg, ISIS 396565 is 17.4mg/kg, and ISIS 396006 is 9.3mg/kg.
Except the ISIS 392063 of maximum dose level, do not observe significantly improving of serum transaminase.Generally speaking, lack antisense compounds and seldom show and even do not show adverse side effect.
Embodiment 30: comprise the Antisense Suppression of the short antisense compounds of Palmic acid conjugate to ApoB
Give 6 ages in week male Balb/c mice (ME) single intraperitoneal injection is lacked antisense compounds for Jackson Laboratory, Bar Harbor, and dosage is 2.5,1.0,0.4 and 0.16umol/kg.Each dosage group has four mices.The chemical compound that is tried shows in table 94.5-10-5MOEgapmer is as control treatment.Put to death mice the last time behind the dosage in about 48 hours.Collect liver organization and carry out the RNA separation, collect blood and carry out the serum chemistry analysis.The ApoBmRNA level is as described herein to be measured by PCR in real time.ApoB mRNA level is normalized to the rna level of measuring by RIBOGREEN, and in table 95 to represent with respect to the inhibition percent of the ApoB mRNA level in the saline treatment control animal.
Table 94: the short antisense compounds that comprises the Palmic acid conjugate
ISIS NOSequence (5 '-3 ')The Gapmer die body SEQ ID NO
387462 GGTACATGGAAGTC2-10-2 methylene oxygen base BNA 190
391871 GGTACATGGAAGTCCytosine not modified (i.e. the 2-10-2MOE of 2 '-(butyl acetamido)-palmitamide on 5 ' nucleotide subsitution) in 1-1-10-22 '-(butyl acetamido)-palmitamide/MOE/MOE interval 190
391872 GGTACATGGAAGTCCytosine not modified (i.e. the 2-10-2 methylene oxygen base BNA of 2 '-(butyl acetamido)-palmitamide on 5 ' nucleotide subsitution) in 1-1-10-22 '-(butyl acetamido)-palmitamide/methylene oxygen base BNA/ methylene oxygen base BNA interval 190
Table 95: the Antisense Suppression that comprises the short antisense compounds of Palmic acid conjugate
IsisNoDosage (umol/kg) %Inhib
5-10-5 2.5 54
387462 2.5 99
1.0 91
0.4 65
0.16 16
391871 2.5 49
1.0 18
0.4 5
0.16 0
391872 2.5 99
1.0 92
0.4 50
0.16 18
Table 95 is presented at after the short antisense compounds processing with Palmic acid (C16) conjugate, and ApoB mRNA level reduces in the dose dependent mode.Under 2.5umol/kg dosage, short antisense compounds to the inhibition of ApoB greater than 5-10-5MOE gapmer viewed inhibition under suitable dosage.In this research, the estimation ED of ISIS 38746250Be 1.5mg/kg, ISIS 391871 is 13.1mg/kg, and ISIS 391872 is 1.9mg/kg.The estimation E`D of 5-10-5MOEgapmer50Be 17.4mg/kg.Triglyceride 2.5 and the ISIS 387462 and the ISIS of 1.0mg/kg dosage lower for 391872 times.ISIS 387462 and ISIS 391872 are with the obvious hypercholesterolemia reducing of dose dependent mode, HDL-C and LDL-C; The decline of LDL-C is very obvious, so that it drops under the detectable limit.Generally speaking, lack antisense compounds and seldom show and even do not show adverse side effect.
Embodiment 31: comprise the Antisense Suppression of the short antisense compounds of BNA modification to PCSK9 in the body
Give 6 ages in week male Balb/c mice (ME) single intraperitoneal injection gives ISIS 403739 or 403740 short antisense compounds for Jackson Laboratory, Bar Harbor, and dosage is 15,4.7,1.5 and .47umol/kg.Each dosage group has four mices.5-10-5MOE gapmer is as control treatment.Put to death mice the last time behind the dosage in about 72 hours.Collect liver organization and carry out the RNA separation, collect blood and carry out the serum chemistry analysis.The PCSK9mRNA level is as described herein to be measured by PCR in real time.The PCSK9mRNA level is normalized to the cyclophilin mRNA level of measuring by PCR in real time.ISIS 403739 has reduced PCSK9mRNA about 70% with respect to saline control.It is about 13% that ISIS 403740 has reduced PCSK9 with respect to saline control, but this reduction is not significant on the statistics.Lower dosage does not lower PCSK9mRNA significantly.Generally speaking, lack antisense compounds and seldom show and even do not show adverse side effect.

Claims (37)

1. length is 8-16 monomeric short antisense compounds, it comprises 2 '-deoxyribonucleotide interval region, these interval region both sides are connected to the pterion, and wherein each pterion independently comprises 1-3 the monomer of modifying through high-affinity, and the nucleotide of wherein said short antisense compounds targeting coding GCCR.
2. the short antisense compounds of claim 1, the wherein said monomer of modifying through high-affinity is through sugar-modified nucleotide.
3. the short antisense compounds of claim 2, wherein at least one comprises abutment between 4 ' and the 2 ' position of sugar-modified nucleotide at sugar.
4. the short antisense compounds of claim 2, wherein each described nucleotide of modifying through high-affinity is given the Δ Tm of every nucleotide 1-4 degree.
5. the short antisense compounds of claim 2, wherein each describedly comprises 2 '-substituent group except that H or OH through sugar-modified nucleotide.
6. the short antisense compounds of claim 5, wherein at least one described be the dicyclic ring thuja acid of 4 '-2 ' bridge joint through sugar-modified nucleotide.
7. the short antisense compounds of claim 5, wherein each 2 '-substituent group independently is alkoxyl, substituted alkoxy or halogen.
8. the short antisense compounds of claim 7, wherein each 2 '-substituent group is OCH2CH2OCH3
9. the short antisense compounds of claim 3, wherein each described conformation through sugar-modified nucleotide independently is β-D or α-L.
10. the short antisense compounds of claim 5, wherein each described abutment independently comprise 1 or 2-4 independently be selected from-[C (R1) (R2)]n-,-C (R1)=C (R2)-,-C (R1)=N-,-C (=NR1)-,-C (=O)-,-C (=S)-,-O-,-Si (R1)2-,-S (=O)x-and-N (R1)-linking group;
Wherein
X is 0,1 or 2;
N is 1,2,3 or 4;
Each R1And R2Independent is H, protecting group, hydroxyl, C1-C12Alkyl, substituted C1-C12Alkyl, C2-C12Thiazolinyl, substituted C2-C12Thiazolinyl, C2-C12Alkynyl, substituted C2-C12Alkynyl, C5-C20Aryl, substituted C5-C20Aryl, heterocyclic radical, substituted heterocyclic radical, heteroaryl, substituted heteroaryl, C5-C7Alcyl, substituted C5-C7Alcyl, halogen, OJ1, NJ1J2, SJ1, N3, COOJ1, acyl group (C (=O)-H), substituted acyl group, CN, sulfonyl (S (=O)2-J1) or sulfinyl (S (=O)-J1); With
Each J1And J2Independent is H, C1-C12Alkyl, substituted C1-C12Alkyl, C2-C12Thiazolinyl, substituted C2-C12Thiazolinyl, C2-C12Alkynyl, substituted C2-C12Alkynyl, C5-C20Aryl, substituted C5-C20Aryl, acyl group (C (=O)-H), substituted acyl group, heterocyclic radical, substituted heterocyclic radical, C1-C12Aminoalkyl, substituted C1-C12Aminoalkyl or protecting group.
11. the short antisense compounds of claim 10, wherein each described abutment independently is 4 '-CH2-2 ', 4 '-(CH2)2-2 ', 4 '-CH2-O-2 ', 4 '-(CH2)2-O-2 ', 4 '-CH2-O-N (R1)-2 ' and 4 '-CH2-N (R1)-O-2 '-, each R wherein1Independent is H, protecting group or C1-C12Alkyl.
12. the short antisense compounds of claim 1, wherein each described monomer of modifying through high-affinity independently is selected from dicyclic ring thuja acid or other nucleotide through 2 '-modification.
13. the short antisense compounds of claim 12, wherein said nucleotide through 2 '-modification is selected from halogen, pi-allyl, amino, azido, thio group, O-pi-allyl, O-C1-C10Alkyl ,-OCF3, O-(CH2)2-O-CH3, 2 '-O (CH2)2SCH3, O-(CH2)2-O-N (Rm) (Rn) or O-CH2-C (=O)-N (Rm) (Rn), each R whereinmAnd RnIndependent is H or substituted or unsubstituted C1-C10Alkyl.
14. the short antisense compounds of claim 13, wherein said nucleotide through 2 '-modification is 2 '-OCH2CH2OCH3Nucleotide.
15. the short antisense compounds of claim 1, wherein at least one Dan Julian key is modified Dan Julian key.
16. the short antisense compounds of claim 15, wherein said modified Dan Julian key is that thiophosphate connects key.
17. the short antisense compounds of claim 1, wherein each Dan Julian key is to connect key between the thiophosphate nucleoside.
18. each short antisense compounds of claim 1-17, the length of described short antisense compounds is 8-15 monomer.
19. the short antisense compounds of claim 18, the length of described short antisense compounds are 9-15 monomer.
20. the short antisense compounds of claim 18, the length of described short antisense compounds are 10-15 monomer.
21. the short antisense compounds of claim 18, the length of described short antisense compounds are 9-14 monomer.
22. the short antisense compounds of claim 18, the length of described short antisense compounds are 10-14 monomer.
23. the short antisense compounds of claim 18, the length of described short antisense compounds are 9-13 monomer.
24. the short antisense compounds of claim 18, the length of described short antisense compounds are 10-13 monomer.
25. the short antisense compounds of claim 18, the length of described short antisense compounds are 9-12 monomer.
26. the short antisense compounds of claim 18, the length of described short antisense compounds are 10-12 monomer.
27. the short antisense compounds of claim 18, the length of described short antisense compounds are 9-11 monomer.
28. the short antisense compounds of claim 18, the length of described short antisense compounds are 10-11 monomer.
29. the short antisense compounds of claim 18, the length of described short antisense compounds are 8 monomers.
30. the short antisense compounds of claim 18, the length of described short antisense compounds are 9 monomers.
31. the short antisense compounds of claim 18, the length of described short antisense compounds are 10 monomers.
32. the short antisense compounds of claim 18, the length of described short antisense compounds are 11 monomers.
33. the short antisense compounds of claim 18, the length of described short antisense compounds are 12 monomers.
34. the short antisense compounds of claim 18, the length of described short antisense compounds are 13 monomers.
35. the short antisense compounds of claim 18, the length of described short antisense compounds are 14 monomers.
36. the short antisense compounds of claim 18, the length of described short antisense compounds are 15 monomers.
37. the short antisense compounds of claim 18, the length of described short antisense compounds are 16 monomers.
CNA2007800254167A2006-05-052007-05-07Compounds and methods for modulating expression of GCCRPendingCN101553236A (en)

Applications Claiming Priority (6)

Application NumberPriority DateFiling DateTitle
US74663106P2006-05-052006-05-05
US60/746,6312006-05-05
US60/747,0592006-05-11
US60/805,6602006-06-23
US60/864,5542006-11-06
USPCT/US2007/0611832007-01-27

Related Child Applications (1)

Application NumberTitlePriority DateFiling Date
CN201310168425.9ADivisionCN103554205A (en)2006-05-052007-05-07Compounds and methods for modulating expression of gccr

Publications (1)

Publication NumberPublication Date
CN101553236Atrue CN101553236A (en)2009-10-07

Family

ID=40891996

Family Applications (2)

Application NumberTitlePriority DateFiling Date
CNA2007800254167APendingCN101553236A (en)2006-05-052007-05-07Compounds and methods for modulating expression of GCCR
CNA2007800254684APendingCN101489565A (en)2006-05-052007-05-07Compounds and methods for modulating expression of gccr

Family Applications After (1)

Application NumberTitlePriority DateFiling Date
CNA2007800254684APendingCN101489565A (en)2006-05-052007-05-07Compounds and methods for modulating expression of gccr

Country Status (2)

CountryLink
CN (2)CN101553236A (en)
ES (2)ES2366974T3 (en)

Cited By (2)

* Cited by examiner, † Cited by third party
Publication numberPriority datePublication dateAssigneeTitle
CN108410868A (en)*2011-09-202018-08-17Ionis制药公司The antisense of GCGR expression is adjusted
CN111593051A (en)*2013-05-012020-08-28Ionis制药公司Compositions and methods

Families Citing this family (16)

* Cited by examiner, † Cited by third party
Publication numberPriority datePublication dateAssigneeTitle
US20130064834A1 (en)2008-12-152013-03-14Regeneron Pharmaceuticals, Inc.Methods for treating hypercholesterolemia using antibodies to pcsk9
JO3672B1 (en)2008-12-152020-08-27Regeneron PharmaHigh Affinity Human Antibodies to PCSK9
AR079336A1 (en)*2009-12-112012-01-18Irm Llc ANTAGONISTS OF THE PRO-PROTEIN CONVERTASE-SUBTILISINE / TYPE 9 QUEXINE (PCSK9)
AR084456A1 (en)*2010-12-222013-05-15Genentech Inc ANTI-PCSK9 ANTIBODY AND METHODS OF USE
AR084937A1 (en)2011-01-282013-07-10Sanofi Sa HUMAN ANTIBODIES AGAINST PCSK9 FOR USE IN TREATMENT METHODS BASED ON PARTICULAR DOSAGE REGIMES
AR087305A1 (en)2011-07-282014-03-12Regeneron Pharma STABILIZED FORMULATIONS CONTAINING ANTI-PCSK9 ANTIBODIES, PREPARATION METHOD AND KIT
CN103930444B (en)2011-09-162020-08-04瑞泽恩制药公司 Method for lowering lipoprotein(a) levels with proprotein convertase subtilisin-9 (PCSK9) inhibitors
AU2014222150A1 (en)*2013-03-012015-09-10National University Corporation Tokyo Medical And Dental UniversityChimeric single-stranded antisense polynucleotides and double-stranded antisense agent
US10111953B2 (en)2013-05-302018-10-30Regeneron Pharmaceuticals, Inc.Methods for reducing remnant cholesterol and other lipoprotein fractions by administering an inhibitor of proprotein convertase subtilisin kexin-9 (PCSK9)
CN111920954A (en)2013-06-072020-11-13再生元制药公司Methods of inhibiting atherosclerosis by administering PCSK9 inhibitors
MX2016006226A (en)2013-11-122016-09-07Sanofi BiotechnologyDosing regimens for use with pcsk9 inhibitors.
RU2735521C2 (en)2014-07-162020-11-03Санофи БайотекнолоджиMethods of treating patients with heterozygous familial hypercholesterolemia (hefh)
CN110691034B (en)2015-07-172022-10-11华为技术有限公司Method and device for transmitting service flow of flexible Ethernet
EA201890519A1 (en)2015-08-182018-07-31Ридженерон Фармасьютикалз, Инк. INHIBITING ANTIBODIES AGAINST PCSK9 FOR THE TREATMENT OF PATIENTS WITH HYPERLIPIDEMIA EXPOSING TO LIPOPROTEIN SCARVA
US11680254B2 (en)*2017-04-212023-06-20Precision Biosciences, Inc.Engineered meganucleases specific for recognition sequences in the PCSK9 gene
US20250059539A1 (en)*2023-06-282025-02-20University Of MassachusettsSglt-2 targeting oligonucleotides

Cited By (2)

* Cited by examiner, † Cited by third party
Publication numberPriority datePublication dateAssigneeTitle
CN108410868A (en)*2011-09-202018-08-17Ionis制药公司The antisense of GCGR expression is adjusted
CN111593051A (en)*2013-05-012020-08-28Ionis制药公司Compositions and methods

Also Published As

Publication numberPublication date
CN101489565A (en)2009-07-22
ES2366974T3 (en)2011-10-27
ES2366973T3 (en)2011-10-27

Similar Documents

PublicationPublication DateTitle
CN101553236A (en)Compounds and methods for modulating expression of GCCR
JP5731115B2 (en) Compounds and methods for modulating gene expression
EP2527442A2 (en)Compounds and methods for modulating gene expression
HK1136221A (en)Compounds and methods for modulating expression of gccr

Legal Events

DateCodeTitleDescription
C06Publication
PB01Publication
C10Entry into substantive examination
SE01Entry into force of request for substantive examination
REGReference to a national code

Ref country code:HK

Ref legal event code:DE

Ref document number:1136221

Country of ref document:HK

C53Correction of patent of invention or patent application
CB02Change of applicant information

Address after:American California

Applicant after:ISIS Pharmaceuticals Inc

Address before:American California

Applicant before:ISIS Pharmaceuticals Inc.

C12Rejection of a patent application after its publication
RJ01Rejection of invention patent application after publication

Application publication date:20091007

REGReference to a national code

Ref country code:HK

Ref legal event code:WD

Ref document number:1136221

Country of ref document:HK


[8]ページ先頭

©2009-2025 Movatter.jp