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A set of simple tools for analyzing data in CT scans
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waveform-computing/ctutils
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This project provides a set of small utilities for processing data from CTscanners in a variety of formats. Currently, the supported formats are:
- Xradia's TXM format
- Volume Graphics VGI+VOL format
- Grayscale TIFF stacks (8-bit, 16-bit)
At the moment, the project's goal is to produce a set of simple command linetools for batch processing of CT scans, and an API to permit easy access toscan data from Python.
Note
Please note that our understanding of several of the formats above islimited (in particular TXM and VGI+VOL), specifically in terms of the datatypes supported within these files.
If you encounter a file which does not work with CT Utils, please file abug report so that we can enhance the suite. Obviouslyexample files make debugging easier, but we understand there may beconfidentiality issues with certain scans (publication embargoes, medicalprivacy, etc.). If this applies to your scans, please do not attach them tothe bug report!
- The project is licensed under theGPL v3 or above
- Projectsource code is hosted by GitHub which also hosts thebug tracker
- Thedocumentation is hosted by ReadTheDocs
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A set of simple tools for analyzing data in CT scans
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