spgemm
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BELLA: a Computationally-Efficient and Highly-Accurate Long-Read to Long-Read Aligner and Overlapper
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May 16, 2022 - C++
Parallel String Graph Construction, Transitive Reduction, and Contig Generation for De Novo Genome Assembly
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Jun 11, 2024 - C++
An MPI+OpenMP hybrid implementation of Gustavson's Sparse Matrix Multiplication for Boolean CSR matrices
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Oct 18, 2021 - C
Searching for peptide candidates using sparse matrix + matrix/vector multiplication.
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Dec 19, 2024 - C++
Proof-of-concept implementation of a search engine that uses sparse matrix multiplication to identify the best peptide candidates for a given mass spectrum.
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Dec 19, 2024 - C#
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