🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment

• UpdatedMay 29, 2024
• C++

SalmonTE is an ultra-Fast and Scalable Quantification Pipeline of Transpose Element (TE) Abundances

• UpdatedJan 26, 2023
• Jupyter Notebook

A Ruby toolset for interacting with the OStatus suite of protocols

• UpdatedJan 12, 2020
• Ruby

PISCES is a pipeline for rapid transcript quantitation, genetic fingerprinting, and quality control assessment of RNAseq libraries using Salmon.

• UpdatedMay 28, 2024
• Python

Differential expression and allelic analysis, nonparametric statistics

• UpdatedJan 3, 2025
• R

RNAseq pipeline centered on Salmon

• UpdatedNov 21, 2024
• Shell

OStatus Specification

• UpdatedApr 11, 2015
• HTML

A salmon plugin for WordPress

• UpdatedApr 23, 2020
• PHP

A JavaScript interpreter for Homespring

• UpdatedJan 11, 2025
• JavaScript

rCAX R package: an R client to access the REST API for the StreamNet Coordinated Assessments tables

• UpdatedJan 14, 2025
• R

CoExp website is a web-based tool developed in .NET Core Framework, for querying 109 independent gene co-expression networks from the family of CoExp R packages.

• UpdatedSep 12, 2023
• JavaScript

Code for smooth interactions with the salvage database

• UpdatedMar 17, 2025
• HTML

Secure all your personal files in Salmon Vault with AES-256 encryption for your Android, Windows, Linux, MacOS devices. Powered by Salmon AES CTR library.

• UpdatedJan 26, 2025
• C#

연어봇 - SalmonBot

• UpdatedAug 2, 2020
• Python

Frontend code of salmonfit.com

• UpdatedDec 16, 2024
• Svelte

Mise à jour et standardisation des séries chronologiques d'abondance du saumon atlantique sur les cours d'eau de l'ORE DiaPFC

• UpdatedMar 17, 2025
• HTML

This is a code tutorial for rna or dna sequence mapping by myself-RyanYip

• UpdatedDec 10, 2018
• Shell

Transform, query, and merge tabular files with the expressionable command-line tool. This tool is used primarily for gene-expression data.

• UpdatedJul 24, 2019
• Python

Code and scripts for the RNA-seq analysis of project: Deciphering the cellular roles and dissecting functional regions of UPF3A and UPF3B in human NMD

• UpdatedDec 3, 2021
• R

Evaluating HISAT2, Salmon and Kallisto alignment using Checkpoint Blockade treated CT26 Experimental Data

• UpdatedMay 4, 2021
• HTML