rrtools: Tools for Writing Reproducible Research in R

• UpdatedJul 21, 2025
• R

papaja (Preparing APA Journal Articles) is an R package that provides document formats to produce complete APA manuscripts from RMarkdown-files (PDF and Word documents) and helper functions that facilitate reporting statistics, tables, and plots.

• UpdatedFeb 20, 2026
• HTML

The Turing Change Point Detection Benchmark: An Extensive Benchmark Evaluation of Change Point Detection Algorithms on real-world data

• UpdatedJul 31, 2025

An archive for NILM papers with source code and other supplemental material

• UpdatedJan 19, 2024

Code for "Depth Uncertainty in Neural Networks" (https://arxiv.org/abs/2006.08437)

• UpdatedOct 3, 2023
• Jupyter Notebook

Cross-disease comparison of case-control gut microbiome studies

• UpdatedFeb 2, 2019
• Python

Ten Simple Rules for Writing Dockerfiles for Reproducible Data Science

• UpdatedNov 11, 2020
• TeX

A model executable manuscript

• UpdatedMar 28, 2022
• HTML

Best practices for applying machine learning to bacterial 16S rRNA gene sequencing data

• UpdatedJun 10, 2020
• R

Unofficial Implementation of ECANets (CVPR 2020) for the Reproducibility Challenge 2020.

• UpdatedSep 20, 2021
• Python

Repository for reproducibility of the CSV file project

• UpdatedJan 20, 2022
• TeX

A collection of Open Source Contributions in Learning from Imbalanced and Overlapped Data

• UpdatedDec 30, 2021

Workshop on reproducible research practices for psychologists

• UpdatedApr 30, 2022
• HTML

R Package - A graphical user interface for some of the main functions of Ben Marwick's rrtools package

• UpdatedNov 3, 2022
• R

• UpdatedApr 1, 2017
• TeX

Introduction to Reproducible Publications with Quarto

• UpdatedFeb 17, 2026

Text, data and code to accompany the analysis of the 1989 excavation data

• UpdatedOct 6, 2017
• R

Microbiota-based model improves the sensitivity for detecting colonic lesions

• UpdatedJun 19, 2016
• R

• UpdatedOct 17, 2017
• R

Reproduce Jupyter Notebooks inside Docker Containers.

• UpdatedNov 2, 2023
• Jupyter Notebook