read-aligners
Here are 10 public repositories matching this topic...
A fast and sensitive gapped read aligner
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Dec 12, 2024 - C++
An ultrafast memory-efficient short read aligner
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May 11, 2022 - C++
Arioc: GPU-accelerated DNA short-read alignment
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Jan 6, 2025
BELLA: a Computationally-Efficient and Highly-Accurate Long-Read to Long-Read Aligner and Overlapper
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May 16, 2022 - C++
The Modular Aligner and The Modular SV Caller
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Jul 18, 2023 - C++
An accurate aligner of long reads to a variation graph, based on co-linear chaining
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Mar 13, 2023 - C++
Evaluation tools for "A performant bridge between fixed-size and variable-size seeding"
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Sep 22, 2020 - Python
Materials & Methods for CNV calling with Genalice software against a benchmark dataset
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Jun 6, 2018 - Shell
A generic DNA read aligner that allows to use different combinations of seeding and extension algorithms.
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May 4, 2018 - C
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