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#

pymol

Here are 107 public repositories matching this topic...

p2rank

Pymol-open-source wheels for Python on Windows.

  • UpdatedFeb 3, 2025
  • Python

PyMOL extension to color AlphaFold structures by confidence (pLDDT).

  • UpdatedJul 23, 2024
  • Python

PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.

  • UpdatedFeb 28, 2025
  • Python

The repository pymolschortucts contains the a collection of shortcuts that are loaded on startup of PyMOL. These shortcuts enable websearches from within PyMOL as well as many other convienent functions that make work in PyMOL more productive..

  • UpdatedMay 8, 2024
  • Python

Rapid generation of high-quality structure figures for publication with PyMOL-PUB

  • UpdatedOct 30, 2024
  • Python

(Linux and macOS) AMDock: Assisted molecular docking with AutoDock4 and AutoDockVina

  • UpdatedAug 3, 2023
  • Python
AMDock-win

(Windows) AMDock: Assisted molecular docking with AutoDock4 and AutoDockVina

  • UpdatedAug 1, 2022
  • Python
PyVibMS

A PyMOL plugin for visualizing vibrations in molecules and solids

  • UpdatedSep 29, 2024
  • Python

molecular dynamics simulation and analysis. 分子动力学模拟和分析。

  • UpdatedOct 3, 2019
  • Jupyter Notebook

Python code to color a PDB structure based on parameters from a multiple sequence alignment

  • UpdatedAug 21, 2023
  • Python

protein utilities in Rust

  • UpdatedMar 15, 2025
  • Rust

Generate Boltzmann-weighted Sterimol Steric Parameters for Conformationally-Flexible Substituents

  • UpdatedJun 21, 2022
  • Python
MichelaNGLo-app

A web app to convert a PyMOL PSE file or PDB file to a easy to implement NGL.js view that can be implemented easily on any site

  • UpdatedJan 31, 2023
  • Mako

This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua

  • UpdatedFeb 4, 2025
  • Python

📝✨ Generate supporting information documents for your computational chemistry manuscripts - Documentation:https://esigen.readthedocs.io

  • UpdatedJan 23, 2019
  • JavaScript

Colorblind-friendly, perceptually uniform palettes for pymol

  • UpdatedJan 25, 2021
  • Python

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