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pre-processing

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nf-core /sarek

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

workflow bioinformatics pipeline annotation genomics nextflow cancer reproducible-research containers conda next-generation-sequencing variant-calling somatic germline whole-exome-sequencing whole-genome-sequencing pre-processing nf-core gatk4 target-panels

UpdatedDec 2, 2025
Nextflow

patternhelloworld /url-knife

Extract and decompose (fuzzy) URLs (including emails, which are conceptually a part of URLs) in texts with Area-Pattern-based modularity

url-parsing url-parser email-parsing uri-template url-validation email-extractor email-parser pre-processing url-extractor url-normalization url-normalizer

UpdatedJan 26, 2025
TypeScript

fitushar /3D-Medical-Imaging-Preprocessing-All-you-need

This Repo Will contain the Preprocessing Code for 3D Medical Imaging

python crop medical-imaging registration resampling simpleitk 3d normalization medical-image-processing medical-image-analysis pre-processing ct-preprocessing 3d-preproceing 3d-padding abdomen-ct mri-preprocessing

UpdatedJul 22, 2020
Jupyter Notebook

zimbatm /mdsh

`$ mdsh` # a markdown shell pre-processor

shell markdown pre-processing pre-commit-hook

UpdatedNov 20, 2025
Rust

yexiang92 /opstool

Pre-Processing, Post-Processing, and Visualization Tailored for OpenSeesPy

visualization python simulation post-processing opensees structural-analysis pre-processing finite-element openseespy

UpdatedNov 24, 2025
Python

azukds /tubular

Python package implementing ML feature engineering and pre-processing for polars or pandas dataframes.

python data-science machine-learning scikit-learn data-transformation transformers pandas feature-engineering pre-processing polars narwhals

UpdatedDec 2, 2025
Python

rodrigobressan /entity_embeddings_categorical

Discover relevant information about categorical data with entity embeddings using Neural Networks (powered by Keras)

machine-learning keras embeddings neural-networks utility-library pre-processing categorical-data entity-embedding

UpdatedDec 8, 2022
Python

jpvantassel /swprepost

A Python package for surface-wave inversion pre- and post-processing.

inversion dispersion post-processing pre-processing surface-waves geopsy dinver swinvert

UpdatedApr 29, 2024
Python

paulross /cpip

CPIP - a C/C++ preprocessor implemented in Python.

python c c-plus-plus preprocessor preprocessing pre-processor pre-processing

UpdatedSep 18, 2025
Python

rezazad68 /BCDUnet_DIBCO

Documnet Image Binarization, DIBCO Challenges

machine-learning deep-neural-networks computer-vision deep-learning image-segmentation handwriting handwriting-recognition keras-tensorflow historical-documents pre-processing image-binarization document-image-binarization

UpdatedSep 15, 2020
Python

khdlr /augmax

Efficiently Composable Data Augmentation on the GPU with Jax

gpu pre-processing jax

UpdatedMay 16, 2025
Python

onera /Cassiopee

CFD pre- and post-processing python modules

python c chimera meshing cfd post-processing cgns pre-processing immersed-boundary-method

UpdatedDec 2, 2025
C

paobranco /SMOGN-LIDTA17

SMOGN: a Pre-processing Approach for Imbalanced Regression - LIDTA2017

regression imbalanced-learning pre-processing

UpdatedAug 1, 2017
R

nive927 /Flight_Delay_Prediction

A two-stage predictive machine learning engine that forecasts the on-time performance of flights for 15 different airports in the USA based on data collected in 2016 and 2017.

machine-learning data-visualization feature-selection performance-metrics feature-extraction forecasts pipelining flights airports data-cleaning smote correlation-coefficient pre-processing auc-roc-curve imbalanced-classes two-stage feature-ranking flight-delay-prediction smote-oversampler random-under-sampling

UpdatedJan 10, 2024
Jupyter Notebook

DigitalBiomarkerDiscoveryPipeline /Pre-process

Pre-processing methods for mHealth and wearables data.

garmin pipeline dtw signal-processing basis empatica-e4 pre-processing empatica pre-process dtw-algorithm 0-preprocess

UpdatedMay 14, 2023
Python

akshaydnicator /Twitter-Sentiment-Analysis-NLP-Hackathon

Problem Statement: Given the tweets from customers about various tech firms who manufacture and sell mobiles, computers, laptops, etc, the task is to identify if the tweets have a negative sentiment towards such companies or products.

nlp machine-learning twitter deep-learning sentiment-analysis hackathon cross-validation spacy neural-networks keras-tensorflow pre-processing punctuation-marks cnn-classification wordvectors sklearn-library features-extraction analytics-vidhya bert-embeddings elmo-vectors lemmetization

UpdatedMay 17, 2020
Python

rjnp2 /Text-Recognition-using-Deep-Learning

keras cnn lstm rnn ctc-loss pre-processing visual-geometry-group

UpdatedAug 29, 2020
Jupyter Notebook

KVSlab /VaMPy

A collection of tools for pre-processing, simulating, and post-processing vascular morphologies.

post-processing computational-fluid-dynamics pre-processing vascular

UpdatedMar 25, 2025
Python

ducthotran2010 /glare-reduction

Glare reduction is a step in Recovering glare images by Image processing method in Convolutional Neural Network (CNN).

opencv image-processing opencv2 pre-processing gamma-correction glare-reduction recovering-glare-images

UpdatedOct 27, 2025
Python

pcastellanoescuder /POMAShiny

🍎 Web-based User-friendly Workflow for Metabolomics and Proteomics Data Analysis

visualization gui bioinformatics r shiny exploratory-data-analysis statistical-analysis proteomics metabolomics mass-spectrometry shiny-apps shinydashboard pre-processing

UpdatedMay 3, 2023
R

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