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#

peak-caller

Here are 11 public repositories matching this topic...

MACS -- Model-based Analysis of ChIP-Seq

  • UpdatedFeb 21, 2025
  • Python

HMMRATAC peak caller for ATAC-seq data

  • UpdatedNov 12, 2024
  • Java

(DEPRECATED) epic: diffuse domain ChIP-Seq caller based on SICER

  • UpdatedNov 21, 2018
  • Python

CLIP-seq Analysis of Multi-mapped reads

  • UpdatedJul 20, 2021
  • Python

SPAN Semi-supervised Peak Analyzer

  • UpdatedMar 14, 2025
  • Kotlin

Improving the feature density based peak caller with dynamic statistics

  • UpdatedOct 23, 2024
  • Python

Robust Open Chromatin Detection via Convex Optimization: Multisample Consensus Peak Calling

  • UpdatedFeb 25, 2025
  • Python

ChIP-seq peak caller

  • UpdatedMar 22, 2017
  • C

Automatically exported from code.google.com/p/zinba

  • UpdatedApr 6, 2017
  • C

Web-based tool to systematically analyze and correct reference minor alleles in variant calling data

  • UpdatedJun 17, 2017
  • HTML

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