Code for running a multicolor structured illumination microscopy (SIM) experiment using a DLP6500 digital micromirror device (DMD) and performing SIM reconstruction.

• UpdatedDec 12, 2024
• Python

I/O operations for OME-TIFF files in Julia

• UpdatedNov 1, 2024
• Julia

Control, reconstruction, and analysis code for oblique plane microscopy.

• UpdatedFeb 7, 2025
• Python

utility functions for analyzing (fly) calcium imaging data

• UpdatedSep 25, 2024
• Jupyter Notebook

Device adapter for Micromanager 1.4 ZWOASI SDK (v.1.36)

• UpdatedOct 30, 2024
• C++

Matlab GUI for live stream from camera though MicroManager core

• UpdatedSep 17, 2024

Micro-manager device driver CMake build

• UpdatedMay 9, 2022
• C++

Micromanager configs for our various scopes

• UpdatedOct 29, 2020

Goniometric imaging software

• UpdatedFeb 1, 2025
• Python

Live stream of a camera via pycromanager, show live background subtraction, save files

• UpdatedMar 20, 2025
• Python