liquid-biopsy
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R package to work with ctDNA sequencing data
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Feb 20, 2022 - R
Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.
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Jun 6, 2023 - HTML
A simplified pipeline for ctDNA sequencing data analysis
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Sep 23, 2017 - Shell
cfDNAPro specializes in standardized and robust cfDNA fragmentomic analysis
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Mar 14, 2025 - R
Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA
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Jun 6, 2024 - C++
Identification of gene-fusions, including EML4-ALK
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Oct 25, 2023 - R
Simple scripts to parallelize miRNA analysis with sRNAtoolbox performed for my Master thesis.
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Nov 21, 2024 - Shell
Plasma cell-free DNA hydroxymethylomes discriminate disease state in EGFR-mutant non-small cell lung cancer.
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Mar 17, 2023 - R
Code for SCLC cfMeDIP-seq PRIME as described in the following paper: doi: 10.1016/j.isci.2022.105487
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Aug 28, 2023 - R
This repository contains the code used in the following publication: doi.org/10.1016/j.isci.2022.105487
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Jun 27, 2023 - R
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