Graph-based modeling environment for biology, including prototype editor and services

• UpdatedJan 24, 2024
• JavaScript

This is the data repository for the models created and edited with the Noctua tool stack for GO.

• UpdatedMar 17, 2025
• Makefile

Code for converting between BioPAX pathways and Gene Ontology Causal Activity Models (GO-CAM)

• UpdatedFeb 27, 2025
• Java

noctua entity ontology

• UpdatedMar 12, 2025
• Perl

Export GO-CAMs to SIF (Python)

• UpdatedJan 5, 2024
• Python

Gene Ontology RDF GraphStore

• UpdatedJan 26, 2024
• Makefile

Schema for Gene Ontology Causal Activity Models defined using RDF Shapes

• UpdatedAug 23, 2024
• Shell

Web component to visualize GO-CAMs

• UpdatedMar 3, 2025
• TypeScript

Converting Signor pathways to GO-CAM

• UpdatedDec 6, 2021
• Python

GitHub repository for the NodeJS/Express REST web service go-api-sparql. Used for the front-endwww.geneontology.org/gocam.

• UpdatedMar 2, 2023
• JavaScript

• UpdatedDec 10, 2024
• TypeScript

Lightweight reusable web component for activity-centric visualizations and edits

• UpdatedFeb 20, 2019

GO-CAM site as an Angular 2+ Application

• UpdatedJan 10, 2025
• TypeScript

A set of GO-CAMs built automatically from Reactome pathways.

• UpdatedNov 5, 2024

A repo for conversion of syngo JSON to GO-CAM OWL

• UpdatedMar 7, 2025
• Python

Base repo for constructing GO-CAM model RDF

• UpdatedSep 30, 2021
• Python

Prototype export GO-CAMs to SIF (NodeJS) - favor gocam-sif-pyexport

• UpdatedDec 26, 2018
• JavaScript

• UpdatedFeb 12, 2025
• TypeScript

Library for general data access and update of GO-CAMs (www.geneontology.org/gocam)

• UpdatedAug 29, 2018

Code for generating process-centric GO-CAM models from GAFs

• UpdatedNov 16, 2023
• Python