genomics-data
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NCBI Datasets is a new resource that lets you easily gather data from across NCBI databases.
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Mar 12, 2025 - Jupyter Notebook
Development repository for the Bioconductor package 'mixOmics '
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Mar 21, 2025 - R
Benchmarks for classification of genomic sequences
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Mar 18, 2025 - Jupyter Notebook
Ontology for consent codes and data use requirements
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Sep 21, 2022 - Makefile
Pandas ExtensionDtypes for dealing with genomics data
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Nov 4, 2024 - Python
An R script to perform two sample Mendelian randomization screening (with TwoSampleMR) for a custom summary statistic against a set of summary statistics from the IEU GWAS database.
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Oct 4, 2022 - R
ILIAD: A suite of automated Snakemake workflows for processing genomic data for downstream applications
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Dec 12, 2023 - Python
Molecular Signatures Database (MSigDB) in a data frame
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Oct 4, 2024 - HTML
Sentieon DNAseq
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Dec 30, 2020 - Shell
[deprecated] 🧬 Python API is used to obtain data from gnomAD
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Dec 9, 2021 - Python
R package to access the genomics and epidemiology data and Research Library metadata compiled and standardized on outbreak.info.
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Mar 5, 2023 - R
Generative Art NFTs from Genomic Data
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Oct 11, 2021 - JavaScript
Python package for compositional data analysis including CLR/ILR, proportionality, partial correlation with basis shrinkage, and visualizations.
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Aug 28, 2023 - Python
A web application for interactive visualization and exploratory data analysis of variant call matrices
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Jul 17, 2023 - Svelte
Miscellaneous R script to wrangle data and generate visualizations
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Aug 14, 2024 - R
CellRank's reproducibility repository.
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Jan 13, 2022 - Jupyter Notebook
🧮 🔢 Generate multi-sample k-mer count matrix from WGS
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Mar 5, 2020 - Perl
2024 BreedWheat Genomic Selection pipeline
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Jan 3, 2024 - R
Sentieon DNAscope + Machine Learning Model
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Mar 19, 2025 - Shell
Genomic BigData Warehousing with Apache Spark and LakeHouse Architecture
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Jan 19, 2023 - Jupyter Notebook
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