A set of ready to use scientific skills for Claude

• UpdatedFeb 18, 2026
• Python

Official git repository for Biopython (originally converted from CVS)

• UpdatedFeb 19, 2026
• Python

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

• UpdatedOct 21, 2025
• Python

A versatile pairwise aligner for genomic and spliced nucleotide sequences

• UpdatedFeb 13, 2026
• C

Official code repository for GATK versions 4 and up

• UpdatedFeb 20, 2026
• Java

Data intensive science for everyone.

• UpdatedFeb 20, 2026
• Python

Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

• UpdatedMar 22, 2025
• C

tools for working with genome variation graphs

• UpdatedFeb 20, 2026
• C++

A collaboratively written review paper on deep learning, genomics, and precision medicine

• UpdatedDec 25, 2022
• HTML

🧬 gget enables efficient querying of genomic reference databases

• UpdatedFeb 20, 2026
• Python

Scripts to download genomes from the NCBI FTP servers

• UpdatedJul 28, 2025
• Python

Cloud-native genomic dataframes and batch computing

• UpdatedFeb 19, 2026
• Python

ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.

• UpdatedFeb 13, 2026
• Scala

Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)

• UpdatedOct 3, 2025
• Python

A comprehensive tutorial about GWAS and PRS

• UpdatedApr 1, 2023

Python library to facilitate genome assembly, annotation, and comparative genomics

• UpdatedFeb 15, 2026
• Python

Python library to handle Gene Ontology (GO) terms

• UpdatedDec 18, 2025
• Python

Foundation Models for Genomics & Transcriptomics

• UpdatedJan 15, 2026
• Jupyter Notebook

The next version of bwa-mem

• UpdatedOct 15, 2025
• C++

Python and C++ code for reading and writing genomics data.

• UpdatedDec 9, 2021
• C++