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genecluster

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orangeSi /GSSplayground

Lightweight single-html-file-based Genome Segments playground for Visualize genome features cluster(gene arrow map or other features), add synteny among genome fragments or add crosslink among features, add short(PE/MP)/long reads(pacbio or nanopore) mapping or snpindel in vcf(not support complex sv yet), support all CIGAR of sam alignment, dire…

visualization svg bioinformatics vcf depth snp comparative-genomics bam synteny transcriptomics genomes sv read-mapping long-reads genome-viewer crosslink genecluster structure-variation indel igv-like

UpdatedJul 12, 2020
HTML

zglu /Chrom_Functional_Clusters

Find enriched functional clusters (pfam/ipr/gene family etc) on chromosomes.

UpdatedOct 24, 2020
Shell

xiexm1 /goldminer

Digitalized homolog cluster maps reveal the complex dynamics of Gene Origin, Duplication, and Loss.

evolutionary-algorithms genecluster

UpdatedMar 14, 2025
R

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