fine-mapping
Here are 26 public repositories matching this topic...
Language:All
Sort:Most stars
PolyFun (POLYgenic FUNctionally-informed fine-mapping)
- Updated
Dec 9, 2024 - Python
🧬High-performance genetics- and genomics-related data visualization using Makie.jl
- Updated
Mar 14, 2025 - Julia
SCAVENGE is a method to optimize the inference of functional and genetic associations to specific cells at single-cell resolution.
- Updated
Sep 1, 2023 - R
A collection of modules to process and analyze IMGT-HLA sequences.
- Updated
Dec 18, 2022 - Parrot
- Updated
Jan 11, 2019 - R
Software to perform multi-ancestry SNP fine-mapping on molecular data
- Updated
Oct 27, 2024 - Python
user-friendly pipeline for GWAS fine-mapping
- Updated
Mar 9, 2025 - Python
Application of the Simple Sum method for testing co-localization of GWAS with any other SNP-level data (e.g. eQTL data)
- Updated
Dec 23, 2024 - JavaScript
Multple methods for BSA Pipeline
- Updated
Dec 22, 2019 - R
DeepGWAS: Enhance GWAS Signals for Neuropsychiatric Disorders via Deep Neural Network
- Updated
Dec 22, 2024 - R
echoverse module: Locus plot creation for fine-mapping and colocalization studies.
- Updated
Oct 21, 2023 - R
Shiny app for plotting and sharing fine-mapping results from echolocatoR
- Updated
Apr 10, 2021 - R
Find risk snp in the LD region of GWAS snps by convolutional neural network
- Updated
Feb 28, 2019 - Python
MGflashfm: joint fine-mapping of genetic association signals in several traits amongst multiple population groups.
- Updated
Jan 21, 2024 - R
gwas workflow from raw intensity data to in-silico functional mapping
- Updated
Jan 7, 2025 - Shell
Flashfm: multi-trait fine-mapping that uses GWAS summary statistics from several traits. Updated and more flexible wrapper functions available at jennasimit.github.io/flashfmZero/
- Updated
Jul 25, 2022 - R
echoverse module: Annotate fine-mapping results
- Updated
Oct 20, 2023 - R
Generating a weighed average of LDSTORE matrices for locus-based fine-mapping.
- Updated
Mar 19, 2021 - R
Improve this page
Add a description, image, and links to thefine-mapping topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with thefine-mapping topic, visit your repo's landing page and select "manage topics."