EEGLAB is an open source signal processing environment for electrophysiological signals running on Matlab and developed at the SCCN/UCSD

• UpdatedFeb 18, 2025
• MATLAB

A Python-based module for creating flexible and robust spike sorting pipelines.

• UpdatedMar 17, 2025
• Python

Fast spike sorting with drift correction

• UpdatedMar 16, 2025
• Python

A list of openly available datasets in (mostly human) electrophysiology.

• UpdatedFeb 25, 2025

Brainstorm software: MEG, EEG, fNIRS, ECoG, sEEG and electrophysiology

• UpdatedMar 12, 2025
• MATLAB

Parameterizing neural power spectra into periodic & aperiodic components.

• UpdatedMar 17, 2025
• Python

phy: interactive visualization and manual spike sorting of large-scale ephys data

• UpdatedAug 2, 2024
• Python

Blue Brain Python Optimisation Library

• UpdatedFeb 26, 2025
• Python

Elephant is the Electrophysiology Analysis Toolkit

• UpdatedFeb 9, 2025
• Python

A Python Toolbox for Multimode Neural Data Representation Analysis - A Representational Analysis Toolbox for Neuroscience, including Neural Pattern Similarity (NPS), Representational Similarity Analysis (RSA), Spatiotemporal Pattern Similarity (STPS) & Inter-Subject Correlation (ISC)

• UpdatedApr 11, 2024
• Python

Automated quality control, curation and neuron classification of spike-sorted electrophysiology data

• UpdatedFeb 27, 2025
• MATLAB

Chaste - Cancer Heart And Soft Tissue Environment - main public repository.

• UpdatedMar 17, 2025
• C++

C++ lsl library for multi-modal time-synched data transmission over the local network

• UpdatedMay 25, 2024
• C++

Frequency domain estimation and functional and directed connectivity analysis tools for electrophysiological data

• UpdatedNov 2, 2023
• Python

NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a pythonist who really did not want to transition to MATLAB to work with Neuropixels: it features a suite of core utility functions for loading, processing and plotting Neuropixels data.

• UpdatedJan 28, 2025
• Jupyter Notebook

Python-based module for extracting from, converting between, and interfacing with many common file formats in extracellular recording.

• UpdatedNov 22, 2022
• Python

Modules for processing extracellular electrophysiology data from Neuropixels probes

• UpdatedAug 18, 2024
• Python

A list of openly available software tools for (mostly human) electrophysiology.

• UpdatedFeb 9, 2025

pyABF is a Python package for reading electrophysiology data from Axon Binary Format (ABF) files

• UpdatedOct 15, 2024
• Jupyter Notebook

CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cells acquired using extracellular electrodes.

• UpdatedDec 9, 2024
• MATLAB