ecology

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vegandevs /vegan

Star473

R package for community ecologists: popular ordination methods, ecological null models & diversity analysis

r ecology ordination ecological-modelling

UpdatedFeb 28, 2025
R

datacarpentry /R-ecology-lesson

Star322

Data Analysis and Visualization in R for Ecologists

r data-visualization english stable data-visualisation lesson data-wrangling ecology data-carpentry open-educational-resources carpentries

UpdatedMar 11, 2025
R

VIAME /VIAME

Star300

Video and Image Analytics for Multiple Environments

open-source machine-learning computer-vision deep-learning image-annotation video-annotation image-processing artificial-intelligence conservation oceanography object-detection ecology annotation-framework video-search marine-biology video-analytics video-analysis

UpdatedMar 17, 2025
Python

cartesapp /cartes

Star245

L'appli Web de cartes grand public

transit maps climate ecology cycling walking public-transport cartes

UpdatedMar 14, 2025
TypeScript

pbs-assess /sdmTMB

Star203

🌎 An R package for spatial and spatiotemporal GLMMs with TMB

r spatial-analysis ecology glmm species-distribution-modelling tmb

UpdatedMar 15, 2025
R

datacarpentry /python-ecology-lesson

Star167

Data Analysis and Visualization in Python for Ecologists

python data-visualization english stable data-visualisation lesson data-wrangling ecology data-carpentry carpentries

UpdatedMar 11, 2025
Jupyter Notebook

ec0lint /ec0lint

Star158

Create sustainable digital environment with ec0lint

javascript css website typescript eslint linter ecology ec0lint digital-ecology

UpdatedFeb 13, 2024
JavaScript

carbonalyser /Carbonalyser

Star152

The add-on "Carbonalyser" allows to visualize the electricity consumption and greenhouse gases (GHG) emissions that your Internet browsing leads to.

chrome-extension firefox-addon addon ecology carbon-emissions

UpdatedJan 2, 2023
JavaScript

EnvironmentOntology /envo

Star142

A community-driven ontology for the representation of environments

data-science environment semantics ontology earth-science data-management ecology esip planetary-science ecoinformatics sustainable-development-goals obofoundry

UpdatedFeb 22, 2025
Makefile

agentmorris /MegaDetector

Star141

MegaDetector is an AI model that helps conservation folks spend less time doing boring things with camera trap images.

machine-learning computer-vision conservation ecology camera-traps wildlife megadetector cameratraps

UpdatedMar 17, 2025
Jupyter Notebook

PetervanLunteren /AddaxAI

Sponsor

Star132

Simplify camera trap image analysis with AI species recognition models based around the MegaDetector model

python windows macos linux machine-learning deploy conservation animals object-detection ecology annotation-tool classifier-model megadetector yolov5 cameratraps

UpdatedMar 16, 2025
Python

globalbioticinteractions /globalbioticinteractions

Star129

Global Biotic Interactions provides access to existing species interaction datasets

bioinformatics parasites biology diet ecology biodiversity diseases eol etl-framework food-webs ecoinformatics globi species-interactions pollinators

UpdatedMar 13, 2025
Java

gbif /pygbif

Star125

GBIF Python client

api data ecology biodiversity gbif

UpdatedDec 2, 2024
Python

drivendataorg /zamba

Star125

A Python package for identifying 42 kinds of animals, training custom models, and estimating distance from camera trap videos and images

python cli machine-learning deep-learning neural-network gpu images pytorch conservation video-processing videos animals ecology camera-traps jungle chimps pytorch-lightning

UpdatedMar 15, 2025
Python

jeffreyevans /spatialEco

Star110

R package for spatial analysis and modelling of ecological systems

cran r vector raster spatial conservation r-package ecology biodiversity r-spatial

UpdatedMar 3, 2025
R

EOA-team /eodal

Star96

Earth Observation Data Analysis Library

python data-science agriculture geospatial gis landsat remote-sensing data-analysis geographic-data ecology environmental-monitoring spatio-temporal earth-observation sentinel-2 sentinel-1 planet-labs

UpdatedFeb 25, 2025
Python

WildlifeDatasets /wildlife-datasets

Star91

WildlifeDatasets: An open-source toolkit for animal re-identification

machine-learning deep-learning dataset datasets ecology ecology-modelling

UpdatedMar 11, 2025
Jupyter Notebook

mooch443 /trex

Star90

TRex, a fast multi-animal tracking system with markerless identification, and 2D estimation of posture and visual fields.

tracking machine-learning video computer-vision video-recording ecology automatic-visual-recognition

UpdatedMar 16, 2025
C++

MarosMacko /CarbonFootprintCalculator

Star84

Calculate your carbon footprint, and find out how much you have to do to eliminate it!

javascript mining ecology carbon-emissions carbon-footprint

UpdatedOct 16, 2018
HTML

NEONScience /NEON-Data-Skills

Star77

Self-paced tutorials that review key data literacy concepts and data analysis skills. Published materials can be found at:

python tutorial r neon ecology data-skills

UpdatedFeb 18, 2025
HTML

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