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PaddlePaddle /PaddleHelix

Bio-Computing Platform Featuring Large-Scale Representation Learning and Multi-Task Deep Learning “螺旋桨”生物计算工具集

machine-learning ddi deeplearning representation-learning ppi rna-structure-prediction protein-design dti protein-folding protein-structure-prediction biocomputing self-supervised-learning graph-networks protein-docking molecule-design

UpdatedNov 15, 2024
Python

dipy /dipy

DIPY is the paragon 3D/4D+ medical imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.

python tracking machine-learning medical-imaging registration neuroimaging segmentation bundles spherical-harmonics microstructure diffusion-mri neuroanatomy tractography dti denoising self-supervised-learning tractometry dki contextual-enhancement patch2self

UpdatedMar 16, 2025
Python

jibikbam /CNN-3D-images-Tensorflow

3D image classification using CNN (Convolutional Neural Network)

neural-network tensorflow cnn medical mri classification convolutional-neural-networks nifti 3d dti

UpdatedOct 29, 2019
Python

dfsp-spirit /fsbrain

R library for structural neuroimaging. Provides high-level functions to access (read and write) and visualize surface-based brain morphometry data for individuals and groups.

visualization r research voxel mri mesh neuroimaging brain surface 3d dti freesurfer

UpdatedNov 27, 2024
R

mfroeling /QMRITools

Processing and visualization tools for quantitative MRI data

visualization mathematica registration epg muscle nifti spectroscopy elastix nii diffusion tractography dti denoising ivim dixon relaxometry extended-phase-graphs noise-suppression jcoupling fasculation

UpdatedMar 7, 2025
Mathematica

BioExplorer

BlueBrain /BioExplorer

The Blue Brain BioExplorer (BBBE) is a tool for data visualization experts and scientists to extract and analyze scientific data from visualization and interactive exploration

python science virus neuroimaging raytracing rendering-engine neuron brain molecular-biology dti virology astrocyte immune-system neurosimulation coronavirus covid19 sars-cov-2 glucose-levels vasculature viral-infection

UpdatedNov 14, 2024
C++

hypermodules /dti

:electron: command-line electron devtools installer

electron devtools electron-devtools-installer dti

UpdatedJun 17, 2019
JavaScript

deargen /mt-dti

An official Molecule Transformer Drug Target Interaction (MT-DTI) model

protein drug-discovery drug dti affinity drug-target-interactions mt-dti molecule-transformer

UpdatedNov 6, 2020
Python

sameerd /DiffusionTensorImaging

Single Shell Free Water Elimination Model for Diffusion Tensor Imaging

neuroimaging dti dipy mri-diffusion freewater

UpdatedJan 18, 2024
Jupyter Notebook

dfsp-spirit /freesurferformats

GNU R package for reading and writing neuroimaging file formats. Not limited to FreeSurfer anymore, despite its name.

r research label voxel mri mesh neuroimaging brain surface parcellation dti freesurfer brain-atlas mgh brain-surfaces fileformats curv

UpdatedSep 15, 2024
R

lrq3000 /csg_mri_pipelines

MRI preprocessing and analysis pipelines and tools for the study of disorders of consciousness

python ascii regexp regular-expression mri unicode-characters spm fmri dwi dti fmri-preproc fmri-data-analysis conn

UpdatedFeb 25, 2025
Jupyter Notebook

Neurita /pypes

Reusable neuroimaging pipelines using nipype

pet neuroimaging plotting fmri preprocessing dti nipype ica

UpdatedMay 28, 2019
Python

zhanglu-cst /Drug-Target-Interaction

Predict whether the protien sequence and the drug SMILES will be interact with each other

dti drug-target-interactions

UpdatedApr 25, 2019
Python

Andoryuuta /MHW-ClassPropDump

An application to dump DTI type information from Monster Hunter: World

UpdatedJun 16, 2024
C++

Hyedryn /elikopy

ElikoPy is Python library aiming at easing the processing of diffusion imaging for microstructural analysis.

python-library diamond preprocessing fsl dti noddi dmri tbss microstructure-fingerprinting diffusion-imaging

UpdatedMar 12, 2025
Python

dfsp-spirit /NeuroFormats.jl

Handling of structural neuroimaging file formats for Julia.

julia voxel neuroscience mri mesh neuroimaging cortex brain surface dti freesurfer fileformats

UpdatedNov 18, 2024
Julia

wangruinju /Double-Fusion

A bayesian approach to examining default mode network functional connectivity and cognitive performance in major depressive disorder

theano fmri pymc3 hierarchical-models bayesian-analysis dti correlation-matrix cholesky-decomposition

UpdatedAug 23, 2019
Python

marcogovoni /TracceDigitali

OSINT: come iniziare. Strumenti e idee per raccogliere e analizzare fonti aperte.

osint cybersecurity dti domain-threat-intelligence closint raccogliere-informazioni-osint

UpdatedMar 28, 2021

cwatson /mri_library

Scripts for MRI preprocessing

pipeline slurm mri neuroimaging dwi brain hpc-applications diffusion-mri tractography dti

UpdatedOct 11, 2020
Shell

zhiyunl /CAM-dMRI

Weakly Object Localization on brain dMRI using CAM

cnn vgg gap inception gmp cam googlenet connectome brain-mri medical-image-processing dti hcp alexnet-pytorch

UpdatedJun 10, 2021
Jupyter Notebook

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