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#

dna-barcoding

Here are 11 public repositories matching this topic...

poly

An R package for pre-processing and error evaluation of COI-5P barcode data

  • UpdatedApr 19, 2022
  • R
HiddenDiversity

This repository contains data and code from the manuscript, "Analysis of biodiversity data suggests that species are hidden in predictable places".

  • UpdatedOct 26, 2022
  • R

Pipeline for building topologically-constrained phylogenies from DNA barcode data

  • UpdatedMar 13, 2025
  • Python

Parser of BLAST results

  • UpdatedAug 5, 2023
  • Python

A sequence-by-sequence denoiser for COI DNA barcode and metabarcode data

  • UpdatedJan 12, 2024
  • R

Files from DIMACS 2007 DNA barcoding challenge

  • UpdatedSep 21, 2022
  • C

Repository containing a python script for barcode gap plotting, as well as an example input-file for the script.

  • UpdatedJun 2, 2022
  • Python

Bioinformatic processes used to obtain invertebrate DNA barcodes from Illumina sequencing output

  • UpdatedMay 19, 2022
  • Python

Iterative extrapolation of species haplotype accumulation curves for genetic diversity assessment.

  • UpdatedSep 24, 2024
  • R

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