differential-abundance-analysis
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R package for microbiome biomarker discovery
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Feb 19, 2025 - R
MaAsLin2: Microbiome Multivariate Association with Linear Models
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Nov 11, 2024 - R
Differential abundance (DA) and correlation analyses for microbial absolute abundance data
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May 21, 2025 - R
Archive: Data, scripts, and outputs for the Nat. Comm. paper "Analysis of Composition of Microbiomes with Bias Correction". Please check our ANCOMBC R package for the most up-to-date ANCOM-BC function.
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Oct 19, 2020 - HTML
Differential analysis of multi-omics data based on the Tweedie distribution
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Aug 8, 2024 - R
A manuscript exploring the effects of taxonomic bias on microbiome differential-abundance analysis.
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Oct 30, 2023 - HTML
Data, scripts, and outputs for the npj Biofilms and Microbiomes paper "Analysis of microbial compositions: A review of normalization and differential abundance analysis"
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Aug 23, 2020 - HTML
Large-scale Benchmarking of Microbial Multivariable Association Methods
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Feb 2, 2021 - R
Collection of walkthrough tutorials on how to use Tweedieverse for differential analysis of omics data.
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Feb 26, 2022 - HTML
A Bayesian model for the differential abundance analysis of microbiome sequencing data
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May 31, 2024 - R
Large-scale Benchmarking of Microbial Multivariable Association Methods
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Nov 14, 2020 - R
🦠Research project in Bioinformatics Institute 2023-2024
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Aug 16, 2024 - Jupyter Notebook
dar: runs multiple differential abundance analysis methods and through a consensus strategy returns a set of differentially abundant features.
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Mar 15, 2025 - R
MAPping METastases in Neuroblastoma - spatially and temporally
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Oct 8, 2024 - R
Secondary analysis of Proteomics data in R, developed by the University of Arkansas for Medical Sciences for the NIH NIGMS Sandbox project.
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Jun 6, 2025 - Jupyter Notebook
An End-to-End GUI for real-time species identification via barcoded nanopore amplicon sequencing data. The pipeline is built using R Shiny library and majorly targets users with minimal coding background. Users can get from sequencing to results in a few clicks.
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Jun 6, 2025 - HTML
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