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ddbj

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Download sequencing data and metadata from GSA, SRA, ENA, and DDBJ databases.

  • UpdatedMar 14, 2025
  • Shell

Pipeline to fetch metadata and raw FastQ files from public databases

  • UpdatedMar 13, 2025
  • Nextflow
worst-genbank-ever

The most awful genbank file you'll ever need to parse.

  • UpdatedJan 19, 2024

This tool will convert GFF3 files into DDBJ annotation files. It was created to work with Braker2 generated GFF files, but should work with any other GFF3 file as well.

  • UpdatedMay 23, 2024
  • Python

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