cross-species
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Cell-type Assignment and Module Extraction based on a heterogeneous graph neural network.
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Jan 27, 2024 - Python
Code for "Whole brain alignment of spatial transcriptomics between humans and mice with BrainAlign"
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Oct 4, 2024 - Python
This project is a part of BRAIN Initiative Cell Census Network (2017-2022)
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Feb 27, 2025 - MATLAB
Code to reproduce Adaptive elastic-net sparse PCA for robust cross-species, cross-platform analysis of complex gene expression data in Alzheimer’s disease (Hin et al.)
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Mar 17, 2022 - R
Scan genomes for internally repeated sequences, elements which are repetitive in another species, or high-identity HGT candidate regions between species.
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Jul 6, 2021 - Python
Workflow to identify functional cis-regulatory regions for each annotated cell type
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Apr 17, 2024 - Python
Cross-species integration of single cell RNA-seq data from the primary motor cortex between human, mouse and drosophila using expiMap and SATURN
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Jul 28, 2023 - Jupyter Notebook
A gene regulation model reveals an ancestral adaptation response to particulate exposure triggered by nanomaterials
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Oct 31, 2024 - R
Incorporating Triplet Error for Predicting PPIs using Deep Learning
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Feb 4, 2025 - Python
This is the lesson repository for the Workshop on Computational Techniques and Resources for Effective Translational Research in Alzheimer's Disease.
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Mar 18, 2025 - R
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