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computational-neuroscience

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brian2

brian-team /brian2

Brian is a free, open source simulator for spiking neural networks.

python science biological-simulations neuroscience computational-neuroscience simulation-framework code-generation spiking-neural-networks differential-equations brian brian2

UpdatedDec 5, 2025
Python

eselkin /awesome-computational-neuroscience

A list of schools and researchers in computational neuroscience

awesome computational-biology neuroscience computational-neuroscience awesome-list computational computational-linguistics computational-psychiatry computational-psychology mathematical-neuroscience

UpdatedAug 2, 2024

asoplata /open-computational-neuroscience-resources

A publicly-editable collection of open computational neuroscience resources

awesome computational-biology neuroscience computational-neuroscience open-science awesome-list brain neuroimaging-data neuroscience-methods neuroscience-data neural-simulators electrophysiological-data neuron-models neural-simulations simulation-neuroscience

UpdatedApr 11, 2024

csinva.github.io

csinva /csinva.github.io

Slides, paper notes, class notes, blog posts, and research on ML 📉, statistics 📊, and AI 🤖.

python blog website data-science machine-learning awesome statistics research ai deep-learning notes slides jekyll-themes ml neuroscience pytorch artificial-intelligence computational-neuroscience stats machine-learning-tutorials

UpdatedNov 24, 2025
HTML

BrainCog-X /Brain-Cog

Brain-inspired Cognitive Intelligence Engine (BrainCog) is a brain-inspired spiking neural network based platform for Brain-inspired Artificial Intelligence and simulating brains at multiple scales. The long term goal of BrainCog is to provide a comprehensive theory and system to decode the mechanisms and principles of human intelligence and its…

computational-neuroscience spiking-neural-networks brain-inspired-computation brain-simulations brain-inspired-ai

UpdatedNov 6, 2025
Python

neurolib-dev /neurolib

Easy whole-brain modeling for computational neuroscientists 🧠💻👩🏿‍🔬

neuroscience computational-neuroscience neural-networks brain-network neuroscience-methods mean-field-theory brain-simulations brain-modeling

UpdatedNov 13, 2025
Python

compcogneuro /book

Computational Cognitive Neuroscience textbook

learning memory computational-neuroscience neural-networks hippocampus neocortex cognitive-neuroscience prefrontal-cortex basal-ganglia

UpdatedAug 8, 2025
TeX

jiaxiaogang /HE

螺旋熵减系统

agi computational-neuroscience learning-algorithm artificial-general-intelligence unsupervised-learning-algorithms helix unsupervised-machine-learning neuromorphic-computing theory-of-helix neuron-models brain-inspired-computation brain-simulations brain-inspired-ai decision-system thinking-machine

UpdatedDec 15, 2025
Objective-C

genn-team /genn

GeNN is a GPU-enhanced Neuronal Network simulation environment based on code generation for Nvidia CUDA and AMD HIP.

simulation computational-neuroscience spiking-neural-networks hacktoberfest nvidia-cuda

UpdatedDec 4, 2025
C++

RatInABox

RatInABox-Lab /RatInABox

A python package for simulating movement and spatial cell types (e.g. place cells, grid cells) in continuous environments.

reinforcement-learning simulation motion neuroscience box computational-neuroscience rat gym neurons continuous modelling locomotion ephys trajectory hippocampus gym-environment modelling-biological-systems grid-cells place-cells boundary-vector-cells

UpdatedOct 6, 2025
Python

BluePyOpt

BlueBrain /BluePyOpt

Blue Brain Python Optimisation Library

python cross-platform genetic-algorithm biological-simulations neuroscience computational-neuroscience evolutionary-algorithms neurons electrophysiology modelling parameter optimisations

UpdatedFeb 26, 2025
Python

ngc-learn

NACLab /ngc-learn

NGC-Learn: Neurobiological Systems Simulation and NeuroAI Design in Python

python machine-learning neuroscience computational-neuroscience neural-networks cognitive-science spiking-neural-networks free-energy learning-algorithms hebbian-learning credit-assignment jax spiking-networks predictive-coding biological-neural-networks local-learning brain-inspired-computing spike-timing-dependent-plasticity predictive-processing neuroai

UpdatedDec 13, 2025
Python

mne-tools /mne-cpp

MNE-CPP: A Framework for Electrophysiology

visualization c-plus-plus machine-learning qt qmake real-time cross-platform analysis signal-processing neuroscience clinical biomedical-informatics meg eeg computational-neuroscience qt3d mne mne-cpp healthcare medical-imaging

UpdatedMay 9, 2024
C++

computational-neuroscience /Computational-Neuroscience-UW

Python scripts that supplement the Coursera Computational Neuroscience course by the University of Washington

computational-neuroscience neural-models

UpdatedJun 20, 2017
Jupyter Notebook

HELIX_THEORY

jiaxiaogang /HELIX_THEORY

螺旋熵减理论

agi computational-neuroscience learning-algorithm artificial-general-intelligence unsupervised-learning-algorithms helix unsupervised-machine-learning neuromorphic-computing theory-of-helix neuron-models brain-inspired-computation brain-simulations brain-inspired-ai decision-system thinking-machine

UpdatedDec 15, 2025
Objective-C

asoplata /open-science-resources

A publicly-editable collection of open science resources, including tools, datasets, meta-resources, etc.

science awesome neuroscience open-data computational-neuroscience open-science awesome-list computational-science open-datasets

UpdatedAug 12, 2022

mrkrd /cochlea

Inner ear models for Python

python model neuroscience sound computational-neuroscience cochlea inner-ear auditory basilar-membrane inner-hair-cell

UpdatedJul 14, 2024
Python

NSBLab /BrainEigenmodes

Code supporting 'Geometric constraints on human brain function'

modeling neuroscience computational-neuroscience fmri brain-imaging eigenmodes brain-function

UpdatedMar 27, 2025
MATLAB

fzenke /auryn

Auryn: A fast simulator for spiking neural networks with synaptic plasticity

parallel-computing computational-neuroscience simulation-framework spiking-neural-networks auryn stdp spiking-neu

UpdatedMar 11, 2025
C++

gifale95 /eeg_encoding

Use DNNs to build encoding models of EEG visual responses.

deep-neural-networks eeg computational-neuroscience human-vision things-database open-dataset neural-encoding visual-object-recognition

UpdatedMar 12, 2025
Python

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