simplified cellranger for long-read data

• UpdatedSep 18, 2024
• Python

Course Assignment on Clustering of Spatial Transcriptomics Data

• UpdatedNov 1, 2022
• Jupyter Notebook

The Advanced Genome Browser

• UpdatedMar 31, 2021
• JavaScript

Research into the viability of leveraging deep learning to successfully generate synthetic biological samples and identify predictive genetic variants.

• UpdatedJun 19, 2021
• Jupyter Notebook

Computational Genomics with R のサンプル集です

• UpdatedFeb 15, 2021
• Jupyter Notebook

🏥 This is my attempt at the selection tests for the GSOC 2019 project, "Human history and data visualization" under the Canadian Center for Computational Genomics

• UpdatedApr 8, 2019
• Python

Homepage of Dr Stephen P. Moss, Computational Scientist

• UpdatedDec 14, 2024
• HTML

Biplots, Volcano plots, PCA plots, Heatmaps and more Computational Genomics data created and visualized during University of Pittsburgh course, Computational Biology (BIOSC1540), with Dr. Miler Lee

• UpdatedJan 25, 2019
• R

This repository contains all the materials for the final project of "Introduction to Bioinformatics", conducted in the fall of 2023 at Sharif University of Technology. The project explores the evolution of flight in birds, covering a wide range of Bioinformatics tasks like Gene Expression Analysis, Genome Assembly, Sequencing and Alignment.

• UpdatedFeb 8, 2024
• Jupyter Notebook

CGG toolkit version 1.0.1

• UpdatedNov 2, 2023
• C

Independent project I undertook to perform a full ChIP-Seq analysis of the transcription factor Nanog in Zebrafish embryos.

• UpdatedAug 10, 2020

Computational Genomics with R

• UpdatedDec 24, 2020
• R

Bioinformatics wealth of African countries

• UpdatedFeb 17, 2024

• UpdatedMay 15, 2019
• Python

Workshops, Course Schedule and Teaching Assistant Review from my time as a chosen Undergraduate Teaching Assistant for the University of Pittsburgh course, BIOSC1540 - Computational Genomics taught by Dr. Miler Lee.

• UpdatedMar 18, 2019
• Shell

This repository contains a Bayesian Neural Network (BNN) based analysis tool for biological network inference that can be used with various datasets. It is programmed in Python along with the torch, torchbnn, pandas, scikit-learn, and matplotlib libraries.

• UpdatedAug 21, 2024
• Python

Project for the course Computational Genomics

• UpdatedJun 3, 2021
• Jupyter Notebook

This repo includes assignments of the course Computational genomics and proteomics taken in 2022 Fall @ CUHKSZ.

• UpdatedApr 9, 2023
• HTML

Kuan-Hao Chao's Website

• UpdatedMar 9, 2025
• HTML

This project focuses on analyzing gene expression data from TCGA cancer data to derive associations among genes as well as disease phenotypes, co-expression signatures, and survival analysis.

• UpdatedMar 25, 2023
• MATLAB