cancer-variants
Here are 9 public repositories matching this topic...
A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants.
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Mar 6, 2025
Personal Cancer Genome Reporter (PCGR)
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Oct 7, 2025 - R
Lollipop-style mutation diagrams for annotating genetic variations.
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Sep 20, 2024 - Go
Framework to process and call somatic variation from NGS dataset generated using MSK-IMPACT assay
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Mar 29, 2021 - Perl
DeTiN is designed to measure tumor-in-normal contamination and improve somatic variant detection sensitivity when using a contaminated matched control.
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May 20, 2022 - Jupyter Notebook
A PyTorch implementation for differentiating between different types of lymphoma cancer
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Jan 5, 2019 - Jupyter Notebook
Python library and package for mutational analysis
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Nov 27, 2025 - Jupyter Notebook
Classify the given genetic variations/mutations based on evidence from text-based clinical literature.
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Aug 13, 2019 - HTML
Code for figure generation and analysis in Finding driver mutations in cancer: Elucidating the role of background mutational processeshttps://doi.org/10.1371/journal.pcbi.1006981
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May 13, 2019 - R
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