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#

biostrings

Here are 8 public repositories matching this topic...

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An R script that calculates a similarity matrix for a list of protein sequences with the aid of Bleakley-Yamanishi Normalized Smith-Waterman Similarity Score.

  • UpdatedDec 23, 2021
  • R

📦 Modstrings: implementation of Biostrings to work with nucleotide sequences containing modified nucleotides.

  • UpdatedMar 26, 2024
  • R

Drosophila simulans genome package forged for BSgenome

  • UpdatedMar 31, 2022
  • HTML

Drosophila mauritania genome package forged with BSgenome

  • UpdatedMar 31, 2022
  • R

The project includes data visualization, variant sequence analysis, and a report detailing the spread and characteristics of COVID-19 variants worldwide.

  • UpdatedDec 28, 2024

The project explores genetic similarities and differences between SARS-CoV-2 variants, focusing on their distribution across Asian, Hispanic, European, and African populations.

  • UpdatedDec 28, 2024

R script for GenBank sequences names changing, filling-in missing molecular markers data and sequences concatenation

  • UpdatedJul 11, 2023
  • R

An R script to measure the potential influence of different parameters that could have affected the speed of pairwise sequence alignment, using the functions of the Biostrings package.

  • UpdatedDec 22, 2021
  • R

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