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#

biopragmatics

Here are 10 public repositories matching this topic...

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bioregistry

📮 An integrative registry of biological databases, ontologies, and nomenclatures.

  • UpdatedMar 22, 2025
  • Python

📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures

  • UpdatedMar 12, 2025
  • Python

🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from primary sources.

  • UpdatedFeb 10, 2025
  • Jupyter Notebook

🪝 What's the latest version for each database?

  • UpdatedMar 22, 2025
  • Python

🛣️ Semantic Mapping Reasoning Assembler (SeMRA): tooling for semantic mappings

  • UpdatedMar 22, 2025
  • Jupyter Notebook

🔍 The Biolookup Service retrieves metadata and ontological information about biomedical entities.

  • UpdatedMar 5, 2025
  • Python

📘 Generate and apply coherent biomedical lexical indices for NER and NEN

  • UpdatedMar 10, 2025
  • Jupyter Notebook

🐋 A dockerfile for the Bioregistry web app

  • UpdatedJan 26, 2022
  • Shell

🐋 A dockerfile for the frontend to the Biolookup Service

  • UpdatedNov 9, 2021
  • Shell

GitHub site for the Biopragmatics Stack

  • UpdatedDec 3, 2024

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