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#

bam

Here are 166 public repositories matching this topic...

C library for high-throughput sequencing data formats

  • UpdatedMar 14, 2025
  • C

Tools for working with SAM/BAM data

  • UpdatedDec 22, 2024
  • D

A Java API for high-throughput sequencing data (HTS) formats.

  • UpdatedMar 13, 2025
  • Java

Syntax highlighting for computational biology

  • UpdatedMar 4, 2023
  • Shell

Randomly subsample sequencing reads or alignments

  • UpdatedNov 29, 2024
  • Rust

Dashboard composition tooling based on the Uberfire framework

  • UpdatedApr 15, 2023
  • Java
Win10

A high performance and compression ratio compressor for genomic data, powered by GTXLab of Genetalks.

  • UpdatedApr 18, 2022

A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/GVF, 23andMe...), up to 5x better than gzip and faster too

  • UpdatedFeb 27, 2025
  • C

Learning the Sequence Alignment/Map format

  • UpdatedMar 25, 2024
  • Perl

VerifyBamID2: A robust tool for DNA contamination estimation from sequence reads using ancestry-agnostic method.

  • UpdatedMay 21, 2024
  • mupad

A DNA Sequence Alignment/Map (SAM) library for Clojure

  • UpdatedMar 12, 2025
  • Clojure

FaceBook Instant Game - BAM Quiz

  • UpdatedMar 29, 2019
  • JavaScript

Simple pure Python SAM parser and objects for working with SAM records

  • UpdatedJun 21, 2022
  • Python

🏔 coverage extraction from BAM/CRAM files, supporting targets 📊  

  • UpdatedSep 29, 2022
  • Nim

Creating alignment plots from bam files

  • UpdatedMar 11, 2025
  • Rust

Frequently used commands in bioinformatics

  • UpdatedOct 12, 2024
  • Python

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