Installation

install.packages("r3dmol")

# install.packages("devtools")devtools::install_github("swsoyee/r3dmol")

Example

library(r3dmol)r3dmol(# Set up the initial viewerviewer_spec= m_viewer_spec(cartoonQuality=10,lowerZoomLimit=50,upperZoomLimit=350  )) %>%  m_add_model(# Add model to scenedata=pdb_6zsl,format="pdb"  ) %>%  m_zoom_to() %>%# Zoom to encompass the whole scene  m_set_style(# Set style of structuresstyle= m_style_cartoon(color="#00cc96"    )  ) %>%  m_set_style(# Set style of specific selectionsel= m_sel(ss="s"),# (selecting by secondary)style= m_style_cartoon(color="#636efa",arrows=TRUE    )  ) %>%  m_set_style(# Style the alpha helixsel= m_sel(ss="h"),# (selecting by alpha helix)style= m_style_cartoon(color="#ff7f0e"    )  ) %>%  m_rotate(# Rotate the scene by given angle on given axisangle=90,axis="y"  ) %>%  m_spin()# Animate the scene by spinning it

About3Dmol.js

Code of Conduct