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Zero-config dynamically-generated queryables, Performance fixes#351

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jonhealy1 merged 12 commits intostac-utils:mainfromZaczero:main
Apr 12, 2025

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Zaczero
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@ZaczeroZaczero commentedApr 7, 2025
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Description:

This PR consists of self-contained commits (except the first commit that provides database_logic deduplication), making it easy to change or remove individual patches. It addresses several small issues, improves the performance of certain methods, and adds support for dynamically-generated queryables. This enhancement doesn't require any new configuration as queryables are generated on the fly based on the os/es mappings. The implementation is designed for extensibility, with built-in logic for augmenting fields metadata with additional information. Currently, it only includes the _DEFAULT_QUERYABLES configuration, which was simply copied from the pre-PR code.

Example queryables response:

{"$schema":"https://json-schema.org/draft/2019-09/schema","$id":"https://stac-api.example.com/queryables","type":"object","title":"Queryables for STAC API","description":"Queryable names for the STAC API Item Search filter.","properties":{"bbox":{"title":"Bbox","type":"number"},"collection":{"description":"Collection","$ref":"https://schemas.stacspec.org/v1.0.0/item-spec/json-schema/item.json#/definitions/core/allOf/2/then/properties/collection","title":"Collection","type":"string"},"geometry":{"description":"Geometry","$ref":"https://schemas.stacspec.org/v1.0.0/item-spec/json-schema/item.json#/definitions/core/allOf/1/oneOf/0/properties/geometry","title":"Geometry","type":"object"},"id":{"description":"ID","$ref":"https://schemas.stacspec.org/v1.0.0/item-spec/json-schema/item.json#/definitions/core/allOf/2/properties/id","title":"Id","type":"string"},"stac_extensions":{"title":"Stac Extensions","type":"string"},"stac_version":{"title":"Stac Version","type":"string"},"type":{"title":"Type","type":"string"},"constellation":{"title":"Constellation","type":"string"},"created":{"description":"Creation Timestamp","$ref":"https://schemas.stacspec.org/v1.0.0/item-spec/json-schema/datetime.json#/properties/created","title":"Created","type":"string","format":"date-time"},"datetime":{"description":"Acquisition Timestamp","$ref":"https://schemas.stacspec.org/v1.0.0/item-spec/json-schema/datetime.json#/properties/datetime","title":"Datetime","type":"string","format":"date-time"},"end_datetime":{"title":"End Datetime","type":"string","format":"date-time"},"eopf:datatake_id":{"title":"Eopf:Datatake Id","type":"string"},"eopf:instrument_configuration_id":{"title":"Eopf:Instrument Configuration Id","type":"number"},"instruments":{"title":"Instruments","type":"string"},"platform":{"title":"Platform","type":"string"},"processing:datetime":{"title":"Processing:Datetime","type":"string","format":"date-time"},"processing:facility":{"title":"Processing:Facility","type":"string"},"processing:level":{"title":"Processing:Level","type":"string"},"processing:version":{"title":"Processing:Version","type":"string"},"product:timeliness":{"title":"Product:Timeliness","type":"string"},"product:timeliness_category":{"title":"Product:Timeliness Category","type":"string"},"product:type":{"title":"Product:Type","type":"string"},"published":{"title":"Published","type":"string","format":"date-time"},"sar:center_frequency":{"title":"Sar:Center Frequency","type":"number"},"sar:frequency_band":{"title":"Sar:Frequency Band","type":"string"},"sar:instrument_mode":{"title":"Sar:Instrument Mode","type":"string"},"sar:observation_direction":{"title":"Sar:Observation Direction","type":"string"},"sar:pixel_spacing_azimuth":{"title":"Sar:Pixel Spacing Azimuth","type":"number"},"sar:pixel_spacing_range":{"title":"Sar:Pixel Spacing Range","type":"number"},"sar:polarizations":{"title":"Sar:Polarizations","type":"string"},"sar:resolution_azimuth":{"title":"Sar:Resolution Azimuth","type":"number"},"sar:resolution_range":{"title":"Sar:Resolution Range","type":"number"},"sat:absolute_orbit":{"title":"Sat:Absolute Orbit","type":"integer"},"sat:orbit_cycle":{"title":"Sat:Orbit Cycle","type":"number"},"sat:orbit_state":{"title":"Sat:Orbit State","type":"string"},"sat:platform_international_designator":{"title":"Sat:Platform International Designator","type":"string"},"sat:relative_orbit":{"title":"Sat:Relative Orbit","type":"integer"},"start_datetime":{"title":"Start Datetime","type":"string","format":"date-time"},"updated":{"description":"Creation Timestamp","$ref":"https://schemas.stacspec.org/v1.0.0/item-spec/json-schema/datetime.json#/properties/updated","title":"Updated","type":"string","format":"date-time"},"view:azimuth":{"title":"View:Azimuth","type":"number"},"view:incidence_angle":{"title":"View:Incidence Angle","type":"number"},"auth:schemes.oidc.openIdConnectUrl":{"title":"Auth:Schemes.Oidc.Openidconnecturl","type":"string"},"auth:schemes.oidc.type":{"title":"Auth:Schemes.Oidc.Type","type":"string"},"auth:schemes.s3.type":{"title":"Auth:Schemes.S3.Type","type":"string"},"storage:schemes.cdse-s3.description":{"title":"Storage:Schemes.Cdse-S3.Description","type":"string"},"storage:schemes.cdse-s3.platform":{"title":"Storage:Schemes.Cdse-S3.Platform","type":"string"},"storage:schemes.cdse-s3.requester_pays":{"title":"Storage:Schemes.Cdse-S3.Requester Pays","type":"boolean"},"storage:schemes.cdse-s3.title":{"title":"Storage:Schemes.Cdse-S3.Title","type":"string"},"storage:schemes.cdse-s3.type":{"title":"Storage:Schemes.Cdse-S3.Type","type":"string"},"storage:schemes.creodias-s3.description":{"title":"Storage:Schemes.Creodias-S3.Description","type":"string"},"storage:schemes.creodias-s3.platform":{"title":"Storage:Schemes.Creodias-S3.Platform","type":"string"},"storage:schemes.creodias-s3.requester_pays":{"title":"Storage:Schemes.Creodias-S3.Requester Pays","type":"boolean"},"storage:schemes.creodias-s3.title":{"title":"Storage:Schemes.Creodias-S3.Title","type":"string"},"storage:schemes.creodias-s3.type":{"title":"Storage:Schemes.Creodias-S3.Type","type":"string"}},"additionalProperties":false}

PS. I think the auto-generated "title" should be removed completely, but I included it because I found it to be common practice in some STAC projects. I'm not sure how you feel about it.

PR Checklist:

  • Code is formatted and linted (runpre-commit run --all-files)
  • Tests pass (runmake test)
  • Documentation has been updated to reflect changes, if applicable
  • Changes are added to the changelog

pedro-cf, jamesfisher-geo, and jonhealy1 reacted with heart emoji
@jonhealy1jonhealy1 self-requested a reviewApril 8, 2025 05:02
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Hi@Zaczero. Looks really good, just a few linting errors.

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It would be nice to have@rhysrevans3 look at this as he is doing work on the queryables.

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@jonhealy1 This looks good to me and is probably a neater solution for/queryables than my pull request as it includes the human readable name and doesn't create an extra index.

@Zaczero am I right in saying this doesn't change the filter extension query? So doesn't effect thequeryables mapping that is used into_es

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jonhealy1 commentedApr 8, 2025
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@rhysrevans3 I sent you an invite to be a maintainer of this project so you can do an official pr review.

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rhysrevans3 previously approved these changesApr 10, 2025
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These look good!

@jonhealy1 I think my queryables pull request could still be useful. It takes a different approach, extracting the fields from the extensions where possible and does something similar to this pull request for the other properties. I'd be happy to attempt to merge the two methods in my pull request once this one is accepted if we want both?

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This looks amazing. I'd like to follow this same approach to generate aggregations as well

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Thanks@Zaczero. Looks great!

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@jonhealy1jonhealy1 merged commit6b25e56 intostac-utils:mainApr 12, 2025
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@jonhealy1jonhealy1 mentioned this pull requestApr 24, 2025
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jonhealy1 added a commit that referenced this pull requestApr 24, 2025
**Description:****Changes from 3.2.5:**#### Added- Added support for dynamically-generated queryables based onElasticsearch/OpenSearch mappings, with extensible metadata augmentation[#351](#351)- Included default queryables configuration for seamless integration.[#351](#351)- Added support for high-performance direct response mode for bothElasticsearch and Opensearch backends, controlled by the`ENABLE_DIRECT_RESPONSE` environment variable. When enabled(`ENABLE_DIRECT_RESPONSE=true`), endpoints return Starlette Responseobjects directly, bypassing FastAPI's jsonable_encoder and Pydanticserialization for significantly improved performance on large searchresponses. **Note:** In this mode, all FastAPI dependencies (includingauthentication, custom status codes, and validation) are disabled forall routes. Default is `false` for safety. A warning is logged atstartup if enabled. See [issue#347](#347)and [PR#359](#359).- Added robust tests for the `ENABLE_DIRECT_RESPONSE` environmentvariable, covering both Elasticsearch and OpenSearch backends. Testsgracefully handle missing backends by attempting to import both configsand skipping if neither is available.[#359](#359)#### Changed- Refactored database logic to reduce duplication[#351](#351)- Replaced `fastapi-slim` with `fastapi` dependency[#351](#351)- Changed minimum Python version to 3.9[#354](#354)- Updated stac-fastapi api, types, and extensions libraries to 5.1.1from 3.0.0 and made various associated changes[#354](#354)- Changed makefile commands from 'docker-compose' to 'docker compose'[#354](#354)- Updated package names in setup.py files to use underscores instead ofperiods for PEP 625 compliance[#358](#358)  - Changed `stac_fastapi.opensearch` to `stac_fastapi_opensearch`  - Changed `stac_fastapi.elasticsearch` to `stac_fastapi_elasticsearch`  - Changed `stac_fastapi.core` to `stac_fastapi_core`  - Updated all related dependencies to use the new naming convention- Renamed `docker-compose.yml` to `compose.yml` to align with DockerCompose V2 conventions[#358](#358)- Removed deprecated `version` field from all compose files[#358](#358)- Updated `STAC_FASTAPI_VERSION` environment variables to 4.0.0 in allcompose files[#362](#362)- Bumped version from 4.0.0a2 to 4.0.0 for the PEP 625 compliant release[#362](#362)- Updated dependency requirements to use compatible release specifiers(~=) for more controlled updates while allowing for bug fixes andsecurity patches[#358](#358)- Removed elasticsearch-dsl dependency as it's now part of theelasticsearch package since version 8.18.0[#358](#358)- Updated test suite to use `httpx.ASGITransport(app=...)` for FastAPIapp testing (removes deprecation warning).[#359](#359)- Updated stac-fastapi parent libraries to 5.2.0.[#359](#359)- Migrated Elasticsearch index template creation from legacy`put_template` to composable `put_index_template` API in`database_logic.py`. This resolves deprecation warnings and ensurescompatibility with Elasticsearch 7.x and 8.x.[#359](#359)- Updated all Pydantic models to use `ConfigDict` instead of class-based`Config` for Pydantic v2 compatibility. This resolves deprecationwarnings and prepares for Pydantic v3.[#359](#359)- Migrated all Pydantic `@root_validator` validators to`@model_validator` for Pydantic v2 compatibility.[#359](#359)- Migrated startup event handling from deprecated`@app.on_event("startup")` to FastAPI's recommended lifespan contextmanager. This removes deprecation warnings and ensures compatibilitywith future FastAPI versions.[#361](#361)- Refactored all boolean environment variable parsing in bothElasticsearch and OpenSearch backends to use the shared `get_bool_env`utility. This ensures robust and consistent handling of environmentvariables such as `ES_USE_SSL`, `ES_HTTP_COMPRESS`, and`ES_VERIFY_CERTS` across both backends.[#359](#359)#### Fixed- Improved performance of `mk_actions` and `filter-links` methods[#351](#351)- Fixed inheritance relating to BaseDatabaseSettings and ApiBaseSettings[#355](#355)- Fixed delete_item and delete_collection methods return types[#355](#355)- Fixed inheritance relating to DatabaseLogic and BaseDatabaseLogic, andApiBaseSettings[#355](#355)**PR Checklist:**- [x] Code is formatted and linted (run `pre-commit run --all-files`)- [x] Tests pass (run `make test`)- [x] Documentation has been updated to reflect changes, if applicable- [x] Changes are added to the changelog
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mk_actions performance issue filter_links performance issue Replace fastapi-slim with fastapi
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