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ssi_analysis_utility Public
Package for the species specific analysis WP6 MicrobeSeq
ssi-dk/ssi_analysis_utility’s past year of commit activity
Python 2MIT 1 14 4 UpdatedDec 17, 2025
diseasy Public
ssi-dk/diseasy’s past year of commit activity
R 50 27 (2 issues need help) 7 UpdatedDec 16, 2025
sepi_point Public
Detection of point mutation-mediated antimicrobial resistance in Staphylococcus epidermidis
ssi-dk/sepi_point’s past year of commit activity
Python0MIT0 0 0 UpdatedDec 16, 2025
diseasystore Public
R package that provides a feature store tailored towards disease modelling
ssi-dk/diseasystore’s past year of commit activity
R 4GPL-3.0 3 7 5 UpdatedDec 16, 2025
AEF-DDF Public
ssi-dk/AEF-DDF’s past year of commit activity
R 10 1 2 UpdatedDec 16, 2025
ssi_analysis_utility_db Public
Custom reference genomes used for species-specific analysis
ssi-dk/ssi_analysis_utility_db’s past year of commit activity
Shell00 1 0 UpdatedDec 16, 2025
uQCme Public
Microbial Quality Control Web Application
ssi-dk/uQCme’s past year of commit activity
Python0MIT0 2 0 UpdatedDec 15, 2025
landingzones Public
A script for helping manage entry and exit points across machines for with cron.
ssi-dk/landingzones’s past year of commit activity
Python 10 0 0 UpdatedDec 15, 2025
SCDB Public
R package for maintaining data bases with slowly-changing-dimensions
ssi-dk/SCDB’s past year of commit activity
R 6GPL-3.0 3 7 3 UpdatedDec 11, 2025
bifrost_bridge Public
ssi-dk/bifrost_bridge’s past year of commit activity
Jupyter Notebook0MIT0 0 0 UpdatedDec 11, 2025

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