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vcztools Public
Partial reimplementation of bcftools for VCF Zarr
sgkit-dev/vcztools’s past year of commit activity
Python 21Apache-2.0 6 51 5 UpdatedFeb 19, 2026
bio2zarr Public
Convert bioinformatics file formats to Zarr
sgkit-dev/bio2zarr’s past year of commit activity
Python 44Apache-2.0 13 61 (3 issues need help) 3 UpdatedFeb 16, 2026
vcf-zarr-spec Public
VCF Zarr Specification
sgkit-dev/vcf-zarr-spec’s past year of commit activity
15Apache-2.0 3 17 1 UpdatedJan 30, 2026
sgkit Public
Scalable genetics toolkit
sgkit-dev/sgkit’s past year of commit activity
Python 274Apache-2.0 39 199 (2 issues need help) 12 UpdatedSep 30, 2025
sgkit-benchmarks-asv Public
sgkit-dev/sgkit-benchmarks-asv’s past year of commit activity
JavaScript0 1 0 0 UpdatedJul 1, 2025
vcf-zarr-publication Public
Manuscript and associated scripts for vcf-zarr publication
sgkit-dev/vcf-zarr-publication’s past year of commit activity
Jupyter Notebook 3 11 1 0 UpdatedApr 1, 2025
SAIGE-VCZ Public Forked fromsaigegit/SAIGE
SAIGE extension that supports VCF Zarr
sgkit-dev/SAIGE-VCZ’s past year of commit activity
C++0GPL-3.0 38 0 0 UpdatedMar 6, 2025
hypothesis-vcf Public
Hypothesis strategy for generating VCF
sgkit-dev/hypothesis-vcf’s past year of commit activity
Python 1Apache-2.00 0 0 UpdatedJan 29, 2025
sgkit-publication Public
Sgkit publication repository
sgkit-dev/sgkit-publication’s past year of commit activity
TeX 5 5 19 0 UpdatedMar 6, 2024
sgkit-publication-backup Public Forked fromsgkit-dev/sgkit-publication
Backup of sgkit publication repository, original manubot version
sgkit-dev/sgkit-publication-backup’s past year of commit activity
HTML0 5 0 0 UpdatedFeb 27, 2023