I'm a Postdoctoral Researcher and Data Engineer at Queen Mary University of London. I'm an expert in interactive data visualisation and EHR datasets such as CPRD. I work with Python, R or Javascript depending on the situation (e.g. project requirements or collaborators' expertise). I created the following packages:

• (R)shinyExprPortal: a configurable portal for sharing analysis of molecular expression data
• (R)visxhclust: an app for visual exploration of hierarchical clustering
• (R)Interactive legends - Shiny UI component

I'm a researcher in theAI MULTIPLY consortium where I have been working on CPRD GOLD and CPRD Aurum datasets. As part of that, I authored or co-authored the following pipelines and packages:

• (Python)bursty_dynamics: a Python package to perform burstiness analysis on event data, including functions to calculate scores, compute trains and visualise results
• (Python + shell scripts)CPRD Data Pipeline Generator: an HPC job generator to process raw CPRD data and prepare an SQLite database for analysis-ready data, including codelist annotations and other steps.

Reach me byemail

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1. C4TB/shinyExprPortalC4TB/shinyExprPortalPublic

   Deploy interactive Shiny portals for exploration and showcase of analysis of molecular expression and phenotype data using a configuration file.

   R 5 1

2. visxhclustvisxhclustPublic

   A Shiny app and functions for visual exploration of hierarchical clustering.

   R 4

3. vfinputsvfinputsPublic

   Visual filter inputs for Shiny apps. Interactive color legends to coordinate filtering across outputs.

   R 1

4. rforceplotsrforceplotsPublic

   Wrapper for shapjs node package for easy force plots in R without Python dependencies

   R 1