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Try usingsysconfig to configure the SS JIT#515

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19 changes: 11 additions & 8 deletions.github/workflows/test_and_build.yml
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Original file line numberDiff line numberDiff line change
Expand Up@@ -85,12 +85,12 @@ jobs:
shell: bash -l {0}
strategy:
# To "stress test" in CI, set `fail-fast` to `false` and perhaps add more items to `matrix.slowtask`
fail-fast:true
fail-fast:false
# The build matrix is [os]x[slowtask] and then randomly chooses [pyver] and [sourcetype].
# This should ensure we'll have full code coverage (i.e., no chance of getting unlucky),
# since we need to run all slow tests on Windows and non-Windoes OSes.
matrix:
os: ["ubuntu-latest", "macos-latest", "windows-latest"]
os: ["ubuntu-latest", "macos-latest", "windows-latest", "ubuntu-latest", "macos-latest", "windows-latest"]
slowtask: ["pytest_normal", "pytest_bizarro", "notebooks"]
env:
# Wheels on OS X come with an OpenMP that conflicts with OpenMP from conda-forge.
Expand DownExpand Up@@ -213,12 +213,15 @@ jobs:
fi
elif [[ ${{ steps.sourcetype.outputs.selected}} == "conda-forge" ]] ; then
psgver=$(python -c 'import random ; print(random.choice(["=7.4.0", "=7.4.1", "=7.4.2", "=7.4.3.0", "=7.4.3.1", "=7.4.3.2", "=8.0.2.1", "=8.2.0.1", "=8.2.1.0", ""]))')
psgver="" # XXX
psg=python-suitesparse-graphblas${psgver}
elif [[ ${{ steps.sourcetype.outputs.selected}} == "wheel" ]] ; then
psgver=$(python -c 'import random ; print(random.choice(["==7.4.3.2", "==8.0.2.1", "==8.2.0.1", "==8.2.1.0", ""]))')
psgver="" # XXX
elif [[ ${{ steps.sourcetype.outputs.selected}} == "source" ]] ; then
# These should be exact versions
psgver=$(python -c 'import random ; print(random.choice(["==7.4.0.0", "==7.4.1.0", "==7.4.2.0", "==7.4.3.0", "==7.4.3.1", "==7.4.3.2", "==8.0.2.1", "==8.2.0.1", "==8.2.1.0", ""]))')
psgver="" # XXX
fi
if [[ ${npver} == "=1.26" ]] ; then
numbaver=""
Expand DownExpand Up@@ -318,7 +321,7 @@ jobs:
G=${{ needs.rngs.outputs.backend == 'G' || '' }} ; H=${{ needs.rngs.outputs.backend == 'H' || '' }}
normal=${{ matrix.slowtask == 'pytest_normal' || '' }} ; bizarro=${{ matrix.slowtask == 'pytest_bizarro' || '' }}
ubuntu=${{ matrix.os == 'ubuntu-latest' || '' }} ; windows=${{ matrix.os == 'windows-latest' || '' }} ; macos=${{ matrix.os == 'macos-latest' || '' }}
mapnumpy='--mapnumpy' ; nomapnumpy='--no-mapnumpy' ; suitesparse='--backend=suitesparse' ; vanilla='--backend=suitesparse-vanilla'
mapnumpy='--mapnumpy' ; nomapnumpy='--no-mapnumpy' ; suitesparse='' ; vanilla=''
args=$(
if [[ $A && $normal ]] ; then if [[ $ubuntu ]] ; then echo " $mapnumpy" ; elif [[ $windows ]] ; then echo " $nomapnumpy" ; fi ; fi)$( \
if [[ $A && $bizarro ]] ; then if [[ $ubuntu ]] ; then echo " $nomapnumpy" ; elif [[ $windows ]] ; then echo " $mapnumpy" ; fi ; fi)$( \
Expand All@@ -338,8 +341,8 @@ jobs:
if [[ $H && $bizarro ]] ; then if [[ $macos ]] ; then echo " $suitesparse" ; elif [[ $windows ]] ; then echo " $vanilla" ; fi ; fi)
echo ${args}
set -x # echo on
coverage run -m pytest --color=yes --randomly -v ${args} \
${{ matrix.slowtask == 'pytest_normal' && '--runslow' || '' }}
coverage run -m pytest --color=yes --randomly -v ${args}--backend=suitesparse\
${{ matrix.slowtask == 'pytest_normal' && '--runslow' || '' }} graphblas/tests/test_ssjit.py
- name: Unit tests (bizarro scalars)
run: |
# Run tests again with Scalars being C scalars by default
Expand All@@ -354,7 +357,7 @@ jobs:
G=${{ needs.rngs.outputs.backend == 'G' || '' }} ; H=${{ needs.rngs.outputs.backend == 'H' || '' }}
normal=${{ matrix.slowtask == 'pytest_normal' || '' }} ; bizarro=${{ matrix.slowtask == 'pytest_bizarro' || '' }}
ubuntu=${{ matrix.os == 'ubuntu-latest' || '' }} ; windows=${{ matrix.os == 'windows-latest' || '' }} ; macos=${{ matrix.os == 'macos-latest' || '' }}
mapnumpy='--mapnumpy' ; nomapnumpy='--no-mapnumpy' ; suitesparse='--backend=suitesparse' ; vanilla='--backend=suitesparse-vanilla'
mapnumpy='--mapnumpy' ; nomapnumpy='--no-mapnumpy' ; suitesparse='' ; vanilla=''
args=$(
if [[ $A && $normal ]] ; then if [[ $ubuntu ]] ; then echo " $nomapnumpy" ; elif [[ $windows ]] ; then echo " $mapnumpy" ; fi ; fi)$( \
if [[ $A && $bizarro ]] ; then if [[ $ubuntu ]] ; then echo " $mapnumpy" ; elif [[ $windows ]] ; then echo " $nomapnumpy" ; fi ; fi)$( \
Expand All@@ -374,8 +377,8 @@ jobs:
if [[ $H && $bizarro ]] ; then if [[ $macos ]] ; then echo " $vanilla" ; elif [[ $windows ]] ; then echo " $suitesparse" ; fi ; fi)
echo ${args}
set -x # echo on
coverage run -a -m pytest --color=yes --randomly -v ${args} \
${{ matrix.slowtask == 'pytest_bizarro' && '--runslow' || '' }}
coverage run -a -m pytest --color=yes --randomly -v ${args}--backend=suitesparse\
${{ matrix.slowtask == 'pytest_bizarro' && '--runslow' || '' }} graphblas/tests/test_ssjit.py
git checkout . # Undo changes to scalar default
- name: Miscellaneous tests
if: matrix.slowtask == 'pytest_normal'
Expand Down
13 changes: 13 additions & 0 deletionsgraphblas/tests/test_ssjit.py
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Original file line numberDiff line numberDiff line change
@@ -1,6 +1,7 @@
import os
import pathlib
import sys
import sysconfig

import numpy as np
import pytest
Expand All@@ -26,6 +27,18 @@

@pytest.fixture(scope="module", autouse=True)
def _setup_jit():
if _IS_SSGB7:
return
gb.ss.config["jit_c_control"] = "on"
if val := sysconfig.get_config_var("CC"):
gb.ss.config["jit_c_compiler_name"] = val
if val := sysconfig.get_config_var("CFLAGS"):
gb.ss.config["jit_c_compiler_flags"] = val
if val := sysconfig.get_config_var("LIBS"):
gb.ss.config["jit_c_libraries"] = val
print(gb.ss.config)
return

# Configuration values below were obtained from the output of the JIT config
# in CI, but with paths changed to use `{conda_prefix}` where appropriate.
if "CONDA_PREFIX" not in os.environ or _IS_SSGB7:
Expand Down
2 changes: 1 addition & 1 deletionpyproject.toml
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Original file line numberDiff line numberDiff line change
Expand Up@@ -87,7 +87,7 @@ pandas = [
"pandas >=1.2",
]
scipy = [
"scipy >=1.8",
"scipy >=1.9",
]
suitesparse-udf = [ # udf requires numba
"python-graphblas[suitesparse,numba]",
Expand Down
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