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Manuscript title: Kiwi development through a microbial lens: How time, local environment, and disease history influence the Brown Kiwi (Apteryx mantelli) gut microbiome
What: Repository for Kiwi gut microbiome projectWhen: February 2020 longitudinal samplingWhere: National Kiwi Hatchery, Rotorua, Aotearoa, New ZealandAuthors: - Priscilla A. San Juan- Emma Bean- Helen McCormick- Arapata Reuben- Manpreet K. DhamiProcessed data and script used for microbiome analysis available in this repository.Data (bacteria):- sample metadata sheet (filename: sample_datasheet_kiwi_2020.csv)- Operational taxonomic unit (OTU) table (filename: bac_otu.csv)- Taxonomic assignment table (filename: bac_tax.csv)Data (fungi):- sample metadata sheet (filename: sample_datasheet_kiwi_2020.csv)- Operational taxonomic unit (OTU) table (filename: fun_otu.csv)- Taxonomic assignment table (filename: fun_tax.csv)Script:- R_kiwi_mic_2020_analysis_code_submit.RRaw data available in NeSI directory Location of raw data (not available until published):/nesi/project/landcare02543/data/priscilla/kiwi2020