Commit4846005

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ENH: Update to more recent PyBIDS

1 parent831c597 commit4846005Copy full SHA for 4846005

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Lines changed: 2 additions & 2 deletions

Original file line number	Diff line number	Diff line change
`@@ -18,7 +18,7 @@ generate_docker() {`
`18`	`18`	`conda_install="python=3.7 pytest jupyter jupyterlab jupyter_contrib_nbextensions`
`19`	`19`	`traits pandas matplotlib scikit-learn scikit-image seaborn nbformat nb_conda" \`
`20`	`20`	`pip_install="https://github.com/nipy/nipype/tarball/master`
`21`		`-https://github.com/INCF/pybids/tarball/0.7.1`
	`21`	`+ pybids==0.13.1`
`22`	`22`	`nilearn datalad[full] nipy duecredit nbval niflow-nipype1-workflows" \`
`23`	`23`	`create_env="neuro" \`
`24`	`24`	`activate=True \`
`@@ -57,7 +57,7 @@ generate_singularity() {`
`57`	`57`	`conda_install="python=3.7 pytest jupyter jupyterlab jupyter_contrib_nbextensions`
`58`	`58`	`traits pandas matplotlib scikit-learn scikit-image seaborn nbformat nb_conda" \`
`59`	`59`	`pip_install="https://github.com/nipy/nipype/tarball/master`
`60`		`-https://github.com/INCF/pybids/tarball/0.7.1`
	`60`	`+ pybids==0.13.1`
`61`	`61`	`nilearn datalad[full] nipy duecredit nbval niflow-nipype1-workflows" \`
`62`	`62`	`create_env="neuro" \`
`63`	`63`	`activate=True \`

Lines changed: 2 additions & 2 deletions

Original file line number	Diff line number	Diff line change
`@@ -140,7 +140,7 @@`
`140`	`140`	`"metadata": {},`
`141`	`141`	`"outputs": [],`
`142`	`142`	`"source": [`
`143`		`-"layout.get(subject='01', suffix='bold',extensions=['nii', 'nii.gz'])"`
	`143`	`+"layout.get(subject='01', suffix='bold',extension=['.nii', '.nii.gz'])"`
`144`	`144`	`]`
`145`	`145`	`},`
`146`	`146`	`{`
`@@ -156,7 +156,7 @@`
`156`	`156`	`"metadata": {},`
`157`	`157`	`"outputs": [],`
`158`	`158`	`"source": [`
`159`		`-"layout.get(subject='01', suffix='bold',extensions=['nii', 'nii.gz'], return_type='file')"`
	`159`	`+"layout.get(subject='01', suffix='bold',extension=['.nii', '.nii.gz'], return_type='file')"`
`160`	`160`	`]`
`161`	`161`	`},`
`162`	`162`	`{`

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