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Hello folks, You may find my docker command below: |
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Replies: 3 comments
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Yes, I have the similar problem. With the latest docker image, run gets completed with no errors, but I have only two files in dwi output (brain mask and b0 ref), no one dwi derivitives |
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Hi Maria,I recommend you use just the FSL edyy_openmp command for the preprocessing.I think dmriprep is not so useful.BestHalil Aziz …--*Halil Aziz VELIOGLU, PhD**Postdoctoral Research Trainee*Feinstein Institute for Medical Research, Center for PsychiatricNeuroscience*Assistant Professor*Istanbul Medipol University, functional Imaging and Cognitive-AffectiveNeuroscience Lab (fINCAN)Maria Zubrikhina ***@***.***>, 7 Haz 2023 Çar, 10:26tarihinde şunu yazdı: Yes, I have the similar problem. With the latest docker image, run gets completed with no errors, but I have only two files in dwi output (brain mask and b0 ref), no one dwi derivitives — Reply to this email directly, view it on GitHub <#199 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ALQXRDKVEGNJONH2DNBEJCLXKCFP5ANCNFSM6AAAAAAWVN2MXY> . You are receiving this because you authored the thread.Message ID: ***@***.***> |
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dmriprep is still pre-alpha software, so it still does not produce useful outputs. I think that's something we should add to the README and documentation of the software. I'll make a PR. |
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