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ncbi-vdb Public
ncbi-vdb
ncbi/ncbi-vdb’s past year of commit activity
C 92 42 10 4 UpdatedJul 18, 2025
tree-tool Public
Incremental building of phylogenetic distance trees
ncbi/tree-tool’s past year of commit activity
HTML 25 10 0 1 UpdatedJul 18, 2025
ncbi-logging Public
Log monitoring and gathering infrastructure to feed analytics
ncbi/ncbi-logging’s past year of commit activity
C++ 7 9 0 2 UpdatedJul 18, 2025
pgap Public
NCBI Prokaryotic Genome Annotation Pipeline
ncbi/pgap’s past year of commit activity
Common Workflow Language 342 96 0 0 UpdatedJul 18, 2025
ncbi-cxx-toolkit-public Public
NCBI C++ Toolkit package sources
ncbi/ncbi-cxx-toolkit-public’s past year of commit activity
C++ 73 35 2 0 UpdatedJul 18, 2025
icn3d Public
web-based protein structure viewer and analysis tool interactively or in batch mode
ncbi/icn3d’s past year of commit activity
JavaScript 167 49 7 2 UpdatedJul 18, 2025
sra-tools Public
SRA Tools
ncbi/sra-tools’s past year of commit activity
C 1,236 264 22 5 UpdatedJul 17, 2025
amr Public
AMRFinderPlus - Identify AMR genes and point mutations, and virulence and stress resistance genes in assembled bacterial nucleotide and protein sequence.
ncbi/amr’s past year of commit activity
C++ 317 46 10 0 UpdatedJul 16, 2025
stxtyper Public
StxTyper uses a standardized algorithm to accurately type both known and unknown Shiga toxin operons from assembled genomic sequence.
ncbi/stxtyper’s past year of commit activity
C++ 17 7 1 0 UpdatedJul 16, 2025
egapx Public
Eukaryotic Genome Annotation Pipeline-External caller scripts and documentation
ncbi/egapx’s past year of commit activity
Nextflow 146 16 15 0 UpdatedJul 15, 2025