Lab of microbial systems biology
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- bacterial_growth
bacterial_growth Publica database and an interface for bacterial growth data
- BTRI_mucin_study_data
BTRI_mucin_study_data PublicProcessed RNA-seq and fermentation data for "Starvation response strategies of human gut bacteria Bacteroides thetaiotaomicron and Roseburia intestinalis and their impact on co-culture dynamics".
- CellScanner
CellScanner PublicCellScanner counts microbial species in flow cytometry data of communities separately with the help of a classifier that is trained on mono-cultures.
- GutMicrobes2022
GutMicrobes2022 PublicSupplementary Material for van de Velde et al. Gut Microbes 2022
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Repositories
- CellScanner Public
CellScanner counts microbial species in flow cytometry data of communities separately with the help of a classifier that is trained on mono-cultures.
msysbio/CellScanner’s past year of commit activity - PlasticDaphnia-ISMEJ Public
Effects of microplastics on Daphnia-associated microbiomes in situ and in vitro
msysbio/PlasticDaphnia-ISMEJ’s past year of commit activity - PlasticEnzSearch Public
msysbio/PlasticEnzSearch’s past year of commit activity - BTRI_mucin_study_data Public
Processed RNA-seq and fermentation data for "Starvation response strategies of human gut bacteria Bacteroides thetaiotaomicron and Roseburia intestinalis and their impact on co-culture dynamics".
msysbio/BTRI_mucin_study_data’s past year of commit activity - BTRI_mucin_study_scripts Public
Scripts for "Starvation response strategies of human gut bacteria Bacteroides thetaiotaomicron and Roseburia intestinalis and their impact on co-culture dynamics".
msysbio/BTRI_mucin_study_scripts’s past year of commit activity