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Karl W Broman

R/lineup is anR package with tools for detecting andcorrecting sample mix-ups between two sets of measurements, such asbetween gene expression data on two tissues.

This is particularly aimed at eQTL data for an experimental cross.

To cite R/lineup in publications use

• Broman KW, Keller MP, Broman AT, Kendziorski C, Yandell BS, Sen Ś,Attie AD (2015) Identification and correction ofsample mix-ups in expression genetic data: A case study.G3 5:2177-2186doi:10.1534/g3.115.019778

This package is free software; you can redistribute it and/or modify itunder the terms of the GNU General Public License, version 3, aspublished by the Free Software Foundation.

This program is distributed in the hope that it will be useful, butwithout any warranty; without even the implied warranty ofmerchantability or fitness for a particular purpose. See the GNUGeneral Public License for more details.

A copy of the GNU General Public License, version 3, is available athttps://www.r-project.org/Licenses/GPL-3