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@jvfe
jvfe
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🐢
slow and steady...

João Cavalcante jvfe

🐢
slow and steady...

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  • Pro

Organizations

@beiko-lab@nf-core@biomegroup@dalmolingroup@codigobonito@nf-core-test

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jvfe/README.md
  • 🥼 Bachelor in Biomedical Science @UFRN
  • 🧬 PhD student@dalmolingroup/@biomegroup
  • 🦠 Worked developing theARETE nextflow pipeline@beiko-lab - Dalhousie University
  • 🇬🇧 Was part of theFuture Innovators programme from the BioDev Network/Sanger Institute
  • 🍏Nextflow Ambassador!
  • 💻GSoC'21 Student Dev for the R Project for Statistical Computing
  • 👨‍💻 Mostly program in Python and R
  • 💬 Current interests in metagenomics, bioinformatics workflows and computational reproducibility
  • 🔗 This is myWebsite
  • 🗎CV
  • ☕ You canbuy me a coffee if you liked something I made!

PinnedLoading

  1. dalmolingroup/euryaledalmolingroup/euryalePublic

    A pipeline for taxonomic classification and functional annotation of metagenomic reads. Based on MEDUSA

    Nextflow 12

  2. beiko-lab/aretebeiko-lab/aretePublic

    AMR/VF LGT focused bacterial genomics analysis workflow

    Python 25 6

  3. pytrialspytrialsPublic

    Python package that wraps around the ClinicalTrials.gov API

    Python 52 18

  4. TextProcTextProcPublic

    Toy REST API for basic text processing

    Python

  5. reconcilerreconcilerPublic

    Python package to reconcile DataFrames

    Python 24 6

  6. dalmolingroup/MicroViewdalmolingroup/MicroViewPublic

    A reporting tool for aggregating results from taxonomic classification analyses

    Python


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