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Find some lectures for theAfrican Mathematical School on Mathematical Modeling in Biology here. See the web page versionhere.

• Lecture 1: Introduction to modelling
• Lecture 2(a): Toolbox to analyse Ordinary Differential Equation models
• Lecture 2(b): Toolbox to analyse discrete time models
• Lecture 3: Beyond mathematical analysis
• Lecture 4: Use of collection of models and model selection

• Lecture 1: Basic Epidemic Models, Disease Data, and Challenges in Modeling Epidemics
• Lecture 2: Heterogeneous Epidemic Models and a Graph-Theoretic Method
• Lecture 3: In-Host Models for Viral Infections of Cells and Backward Bifurcation

James' material is onhis website. I will add links to stuff he mentions here, for convenience.

• Lecture 1 on the simple death process.

• All lectures in one file

• A lecture (from another course) on parameter identificationhere
• Lecture 1: The chemostat
• Lecture 2: Metapopulation models. Note: not proofread yet, definitely needs further editing
• Lecture 3: A few more random things about stoc>

• All lectures in one file: Delay differential equations

You can find some code related to the lectures inthis directory in the GitHub repo. Specifically, follow the links below to get directly to the code by:

• Julien Arino:code directory
• Faraimunashe Chirove:code directory
• Michael Li:code directory
• Stéphanie Portet:code directory